Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013405.t1 | XP_013461539.1 | 97.5 | 601 | 14 | 1 | 1 | 601 | 3 | 602 | 0.00E+00 | 1135.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013405.t1 | Q9SRK7 | 80.1 | 549 | 109 | 0 | 21 | 569 | 19 | 567 | 7.1e-256 | 884.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013405.t1 | A0A072V0M1 | 97.5 | 601 | 14 | 1 | 1 | 601 | 3 | 602 | 0.0e+00 | 1135.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene35464 | MS.gene013405 | PPI |
| MS.gene013405 | MS.gene022431 | PPI |
| MS.gene013405 | MS.gene98272 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013405.t1 | MTR_3g094320 | 97.504 | 601 | 14 | 1 | 1 | 601 | 3 | 602 | 0.0 | 1193 |
| MS.gene013405.t1 | MTR_3g075120 | 49.470 | 566 | 239 | 7 | 20 | 582 | 18 | 539 | 2.18e-175 | 508 |
| MS.gene013405.t1 | MTR_7g072600 | 78.947 | 76 | 16 | 0 | 205 | 280 | 18 | 93 | 8.59e-31 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013405.t1 | AT3G10960 | 79.249 | 559 | 114 | 1 | 13 | 569 | 9 | 567 | 0.0 | 928 |
| MS.gene013405.t1 | AT5G50300 | 52.008 | 523 | 211 | 6 | 24 | 546 | 16 | 498 | 0.0 | 523 |
| MS.gene013405.t1 | AT5G50300 | 52.107 | 522 | 210 | 6 | 25 | 546 | 34 | 515 | 0.0 | 523 |
Find 185 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTACATTGTGTTGAATATT+TGG | 0.076406 | 3.4:+86008259 | MS.gene013405:CDS |
| CTTCCAGGTGGAACGGTTTC+TGG | 0.122948 | 3.4:+86007478 | MS.gene013405:CDS |
| TTGACGTATTCTATTGCTTA+TGG | 0.169383 | 3.4:+86008216 | MS.gene013405:CDS |
| TCGATTCCGGCTTGGGCTAT+TGG | 0.191352 | 3.4:+86008084 | MS.gene013405:CDS |
| TCTATTGCTTATGGGCTTAT+TGG | 0.196928 | 3.4:+86008225 | MS.gene013405:CDS |
| GAAGAATTATTAGCACTATT+TGG | 0.227427 | 3.4:-86008339 | None:intergenic |
| GCGGCATAGCCCGGGTTAAC+AGG | 0.231130 | 3.4:-86006995 | None:intergenic |
| TGGGCTTGGTGGGCTGGAAG+TGG | 0.265248 | 3.4:-86006680 | None:intergenic |
| TTTGTGTGGGCTTGGTGGGC+TGG | 0.270309 | 3.4:-86006686 | None:intergenic |
| AGTTGTAGTGCTTTAGCATT+TGG | 0.276034 | 3.4:-86008417 | None:intergenic |
| GGCTTGGTGGGCTGGAAGTG+GGG | 0.285194 | 3.4:-86006678 | None:intergenic |
| TGACGTATTCTATTGCTTAT+GGG | 0.291944 | 3.4:+86008217 | MS.gene013405:CDS |
| CCTCATTGGTTGCTTCATCA+TGG | 0.302903 | 3.4:+86007069 | MS.gene013405:CDS |
| TACACCGTCGTGGGCTTTCA+TGG | 0.307316 | 3.4:+86007154 | MS.gene013405:CDS |
| GGGCTTGGTGGGCTGGAAGT+GGG | 0.307342 | 3.4:-86006679 | None:intergenic |
| ACACTCTGGTTGGGCCTTGT+GGG | 0.309150 | 3.4:+86007538 | MS.gene013405:CDS |
| TTAGCACTATTTGGCTCCTT+TGG | 0.309880 | 3.4:-86008330 | None:intergenic |
| ACCGTGGCTTCTTCCCTCAT+TGG | 0.312133 | 3.4:+86007055 | MS.gene013405:CDS |
| GAGCTTATTCTAACGGGCTT+TGG | 0.315835 | 3.4:-86007286 | None:intergenic |
| GGGCTTTGTGTGGGCTTGGT+GGG | 0.322247 | 3.4:-86006690 | None:intergenic |
| GCAAATTTGCATGAGATATC+AGG | 0.323440 | 3.4:-86006971 | None:intergenic |
| GTTGGCTTCGATTCCGGCTT+GGG | 0.351004 | 3.4:+86008077 | MS.gene013405:CDS |
| TGGGCTTTGTGTGGGCTTGG+TGG | 0.351560 | 3.4:-86006691 | None:intergenic |
| ATTGTGGTGGGGTCGTTGTT+AGG | 0.353079 | 3.4:+86007934 | MS.gene013405:CDS |
| GCTTGGTGGGCTGGAAGTGG+GGG | 0.354232 | 3.4:-86006677 | None:intergenic |
| CTCATTGGTTGCTTCATCAT+GGG | 0.356545 | 3.4:+86007070 | MS.gene013405:CDS |
| GAATCACCGGCGGCGGTGTT+AGG | 0.356687 | 3.4:-86007673 | None:intergenic |
| TTTAGGCCTTGCTCCAGGTA+TGG | 0.357659 | 3.4:+86007111 | MS.gene013405:CDS |
| ACCGTTGTTGGCTTCGATTC+CGG | 0.363246 | 3.4:+86008071 | MS.gene013405:CDS |
| AACACTCTGGTTGGGCCTTG+TGG | 0.368956 | 3.4:+86007537 | MS.gene013405:CDS |
| TGTGTTGAATATTTGGGATT+GGG | 0.370811 | 3.4:+86008266 | MS.gene013405:CDS |
| GACTCAATAAACGCCGTTAC+CGG | 0.371162 | 3.4:-86007964 | None:intergenic |
| TATGGGCTTATTGGTGGGAT+TGG | 0.373153 | 3.4:+86008234 | MS.gene013405:CDS |
| TTACATTGTGTTGAATATTT+GGG | 0.373652 | 3.4:+86008260 | MS.gene013405:CDS |
| TGTTGGCTTCGATTCCGGCT+TGG | 0.388698 | 3.4:+86008076 | MS.gene013405:CDS |
| AGCCGTTCCGGCACGGAGTT+CGG | 0.388894 | 3.4:-86006795 | None:intergenic |
| CTTCTCAATCTCAAGTCAAT+GGG | 0.395869 | 3.4:+86008358 | MS.gene013405:CDS |
| GACAGGAACGTTGTATTCTA+TGG | 0.398225 | 3.4:+86007834 | MS.gene013405:CDS |
| TTAGGCCTTGCTCCAGGTAT+GGG | 0.400907 | 3.4:+86007112 | MS.gene013405:CDS |
| TTCTTACTCATTTCATCAGT+CGG | 0.402497 | 3.4:+86007235 | MS.gene013405:CDS |
| TTGCGACGATCAAGTCTTTA+CGG | 0.404816 | 3.4:-86007033 | None:intergenic |
| GTGTTGAATATTTGGGATTG+GGG | 0.406876 | 3.4:+86008267 | MS.gene013405:CDS |
| CAAGGCCCAACCAGAGTGTT+GGG | 0.421403 | 3.4:-86007534 | None:intergenic |
| AGATGGGCTTTGTGTGGGCT+TGG | 0.423297 | 3.4:-86006694 | None:intergenic |
| CCGCTAAGGGCGGTTATAAC+CGG | 0.425739 | 3.4:-86007442 | None:intergenic |
| TATTCTATGGCAAGGTTCGC+AGG | 0.427768 | 3.4:+86007847 | MS.gene013405:CDS |
| TCTTCTCAATCTCAAGTCAA+TGG | 0.428375 | 3.4:+86008357 | MS.gene013405:CDS |
| GCCTCCATTCTAACTGATTC+CGG | 0.430705 | 3.4:+86006854 | MS.gene013405:CDS |
| TTGTGTTGAATATTTGGGAT+TGG | 0.433005 | 3.4:+86008265 | MS.gene013405:CDS |
| AGTTAGAATGGAGGCGTTGA+CGG | 0.433565 | 3.4:-86006846 | None:intergenic |
| ATCAAGGTATCGGGCTCGTT+GGG | 0.436910 | 3.4:+86007356 | MS.gene013405:CDS |
| GATCAGTGGTGGAGATTGAT+TGG | 0.437552 | 3.4:+86008142 | MS.gene013405:CDS |
| GCGTTTATTGAGTCTTCAAC+GGG | 0.437581 | 3.4:+86007973 | MS.gene013405:CDS |
| CAAATTTGCCCCTGTTAACC+CGG | 0.439914 | 3.4:+86006985 | MS.gene013405:CDS |
| TTGCTTATGGGCTTATTGGT+GGG | 0.440354 | 3.4:+86008229 | MS.gene013405:CDS |
| TCAAGACAAGCGGCATAGCC+CGG | 0.441522 | 3.4:-86007004 | None:intergenic |
| ATTGCTTATGGGCTTATTGG+TGG | 0.443433 | 3.4:+86008228 | MS.gene013405:CDS |
| TAAGCGTTTGAGCCCATACC+TGG | 0.449378 | 3.4:-86007124 | None:intergenic |
| GGAACCGTTAGTTTACTTCC+AGG | 0.451773 | 3.4:+86007463 | MS.gene013405:CDS |
| TACCTGGAGCAAGGCCTAAA+GGG | 0.453864 | 3.4:-86007108 | None:intergenic |
| GCAGGTTTCACCGACGAAAA+CGG | 0.454776 | 3.4:+86007865 | MS.gene013405:CDS |
| AACGGGGATAACGGCGTTGA+CGG | 0.457237 | 3.4:+86008014 | MS.gene013405:CDS |
| TAAGCTCCTCCGCCGGTATC+GGG | 0.458576 | 3.4:+86007302 | MS.gene013405:CDS |
| ATAAGCTCCTCCGCCGGTAT+CGG | 0.462080 | 3.4:+86007301 | MS.gene013405:CDS |
| AGTTTGAGGTAGAGATGGAT+GGG | 0.464799 | 3.4:-86006919 | None:intergenic |
| TGTTGGGCCGGTACAGTTTG+AGG | 0.465795 | 3.4:-86006933 | None:intergenic |
| GATAACGGCGTTGACGGTGG+CGG | 0.470469 | 3.4:+86008020 | MS.gene013405:CDS |
| GCGGAGGAGCTTATTCTAAC+GGG | 0.470882 | 3.4:-86007292 | None:intergenic |
| CTTCAAAACAATCAAGGTAT+CGG | 0.473008 | 3.4:+86007346 | MS.gene013405:CDS |
| TGCGACGATCAAGTCTTTAC+GGG | 0.473171 | 3.4:-86007032 | None:intergenic |
| GAAAGCCCAACACTCTGGTT+GGG | 0.477055 | 3.4:+86007529 | MS.gene013405:CDS |
| GTAAACTAACGGTTCCGCTA+AGG | 0.477289 | 3.4:-86007456 | None:intergenic |
| ATCGGGCTTCAAAACAATCA+AGG | 0.478586 | 3.4:+86007340 | MS.gene013405:CDS |
| AAGAAGCCCGTGATGAGCTT+GGG | 0.478670 | 3.4:-86007414 | None:intergenic |
| GGTGAGGAAAGTAGCCGTTC+CGG | 0.483396 | 3.4:-86006807 | None:intergenic |
| CTCCCTTTAGGCCTTGCTCC+AGG | 0.484772 | 3.4:+86007106 | MS.gene013405:CDS |
| CGGCATAGCCCGGGTTAACA+GGG | 0.484866 | 3.4:-86006994 | None:intergenic |
| TACTTTGCTTACACCGTCGT+GGG | 0.484912 | 3.4:+86007145 | MS.gene013405:CDS |
| TTCAAAACAATCAAGGTATC+GGG | 0.488455 | 3.4:+86007347 | MS.gene013405:CDS |
| AAAGAAGCCCGTGATGAGCT+TGG | 0.488675 | 3.4:-86007415 | None:intergenic |
| GATGCCACGTCGATTGTGGT+GGG | 0.494246 | 3.4:+86007922 | MS.gene013405:CDS |
| CAGTTTGAGGTAGAGATGGA+TGG | 0.494890 | 3.4:-86006920 | None:intergenic |
| TAAACTAACGGTTCCGCTAA+GGG | 0.498141 | 3.4:-86007455 | None:intergenic |
| ATAACGGCGTTGACGGTGGC+GGG | 0.500012 | 3.4:+86008021 | MS.gene013405:CDS |
| ACAAGGCCCAACCAGAGTGT+TGG | 0.502515 | 3.4:-86007535 | None:intergenic |
| AATCAAGGTATCGGGCTCGT+TGG | 0.506621 | 3.4:+86007355 | MS.gene013405:CDS |
| ATACCTGGAGCAAGGCCTAA+AGG | 0.511435 | 3.4:-86007109 | None:intergenic |
| GGAAAGCCCAACACTCTGGT+TGG | 0.517673 | 3.4:+86007528 | MS.gene013405:CDS |
| AAACTGCTGCGAGTGCGCTT+TGG | 0.520672 | 3.4:-86007195 | None:intergenic |
| GTCGTGGGCTTTCATGGCTC+CGG | 0.521893 | 3.4:+86007160 | MS.gene013405:CDS |
| GTGGTTGCCCAAGCTCATCA+CGG | 0.526556 | 3.4:+86007407 | MS.gene013405:CDS |
| GGTGAAAGTGGAGTTACGTT+GGG | 0.530487 | 3.4:-86006771 | None:intergenic |
| ATCTCTACCTCAAACTGTAC+CGG | 0.533272 | 3.4:+86006926 | MS.gene013405:CDS |
| AAAACTTAACGCACCTGCTG+TGG | 0.535615 | 3.4:-86007743 | None:intergenic |
| TCCGCCGGAATCAGTTAGAA+TGG | 0.535814 | 3.4:-86006858 | None:intergenic |
| GTTAGGAACTTCACCGGTAA+CGG | 0.535923 | 3.4:+86007951 | MS.gene013405:CDS |
| TGGTTGCCCAAGCTCATCAC+GGG | 0.536796 | 3.4:+86007408 | MS.gene013405:CDS |
| GTGGACATTCTCGACACGAC+AGG | 0.538088 | 3.4:+86007817 | MS.gene013405:CDS |
| CAAGACAAGCGGCATAGCCC+GGG | 0.539731 | 3.4:-86007003 | None:intergenic |
| ACGGAGTTCGGTGGTGAAAG+TGG | 0.539970 | 3.4:-86006783 | None:intergenic |
| ATCACGGGCTTCTTTAGCGC+CGG | 0.540803 | 3.4:+86007423 | MS.gene013405:CDS |
| GAATGGAAAGCCCAACACTC+TGG | 0.545342 | 3.4:+86007524 | MS.gene013405:CDS |
| CACCGAACTCCGTGCCGGAA+CGG | 0.546674 | 3.4:+86006793 | MS.gene013405:CDS |
| ATCAGTGGTGGAGATTGATT+GGG | 0.550445 | 3.4:+86008143 | MS.gene013405:CDS |
| ATACTCATGAGCTGAATCAC+CGG | 0.551717 | 3.4:-86007686 | None:intergenic |
| GTCGGATGCCACGTCGATTG+TGG | 0.557591 | 3.4:+86007918 | MS.gene013405:CDS |
| TTACTTTGCTTACACCGTCG+TGG | 0.560920 | 3.4:+86007144 | MS.gene013405:CDS |
| AGCGAGAGATGGGCTTTGTG+TGG | 0.561400 | 3.4:-86006700 | None:intergenic |
| TTCAACGGGGATAAGAGAAG+GGG | 0.564344 | 3.4:+86007987 | MS.gene013405:CDS |
| TGAACAGAGAGGGACACAAT+CGG | 0.566224 | 3.4:-86006894 | None:intergenic |
| GGCGTTTATTGAGTCTTCAA+CGG | 0.566505 | 3.4:+86007972 | MS.gene013405:CDS |
| TAGTTTACTTCCAGGTGGAA+CGG | 0.566620 | 3.4:+86007471 | MS.gene013405:CDS |
| TCACCAGAAACCGTTCCACC+TGG | 0.568299 | 3.4:-86007481 | None:intergenic |
| GTCGTTGTTAGGAACTTCAC+CGG | 0.568498 | 3.4:+86007945 | MS.gene013405:CDS |
| AGCTCATGAGTATTTCAAGA+AGG | 0.569434 | 3.4:+86007696 | MS.gene013405:CDS |
| ATGAGCTGAATCACCGGCGG+CGG | 0.573355 | 3.4:-86007680 | None:intergenic |
| CATGATGAAGCAACCAATGA+GGG | 0.573818 | 3.4:-86007068 | None:intergenic |
| TAGGTGTTGAAGCGAGAGAT+GGG | 0.574642 | 3.4:-86006710 | None:intergenic |
| TGTTGAATATTTGGGATTGG+GGG | 0.574721 | 3.4:+86008268 | MS.gene013405:CDS |
| GTAGGTGTTGAAGCGAGAGA+TGG | 0.577020 | 3.4:-86006711 | None:intergenic |
| TTGGGCTTTCCATTCTATCA+CGG | 0.579130 | 3.4:-86007516 | None:intergenic |
| GCGTTTCCTAACACCGCCGC+CGG | 0.580860 | 3.4:+86007667 | MS.gene013405:CDS |
| TTCACCACCGAACTCCGTGC+CGG | 0.584018 | 3.4:+86006788 | MS.gene013405:CDS |
| TTTGATGATGAGATCAGTGG+TGG | 0.585140 | 3.4:+86008131 | MS.gene013405:CDS |
| GCTGAATGAGATGAAGTGTT+GGG | 0.585209 | 3.4:-86006949 | None:intergenic |
| CCGGTTATAACCGCCCTTAG+CGG | 0.586075 | 3.4:+86007442 | MS.gene013405:CDS |
| GGCTGAATGAGATGAAGTGT+TGG | 0.586143 | 3.4:-86006950 | None:intergenic |
| GCGAGAGATGGGCTTTGTGT+GGG | 0.587534 | 3.4:-86006699 | None:intergenic |
| GTGAAAGGAGCAATGATCTA+CGG | 0.592507 | 3.4:+86007595 | MS.gene013405:CDS |
| GGGGATAACGGCGTTGACGG+TGG | 0.593326 | 3.4:+86008017 | MS.gene013405:CDS |
| GGATGCCACGTCGATTGTGG+TGG | 0.594421 | 3.4:+86007921 | MS.gene013405:CDS |
| TACGTAGCTAAAACAAGACT+AGG | 0.594536 | 3.4:+86006731 | MS.gene013405:CDS |
| GGTACAGTTTGAGGTAGAGA+TGG | 0.595273 | 3.4:-86006924 | None:intergenic |
| ACCAATGAGGGAAGAAGCCA+CGG | 0.598545 | 3.4:-86007056 | None:intergenic |
| CTTCAACGGGGATAAGAGAA+GGG | 0.601128 | 3.4:+86007986 | MS.gene013405:CDS |
| TTGAGCCCATACCTGGAGCA+AGG | 0.601157 | 3.4:-86007117 | None:intergenic |
| TCTTCAACGGGGATAAGAGA+AGG | 0.601843 | 3.4:+86007985 | MS.gene013405:CDS |
| GGCGGAGGAGCTTATTCTAA+CGG | 0.607380 | 3.4:-86007293 | None:intergenic |
| ACCACCGAGTGTGACTAAAG+TGG | 0.607913 | 3.4:-86007389 | None:intergenic |
| AACGGCTACTTTCCTCACCA+TGG | 0.608652 | 3.4:+86006811 | MS.gene013405:CDS |
| GAATGGAGGCGTTGACGGCG+AGG | 0.609867 | 3.4:-86006841 | None:intergenic |
| AAATTTGCCCCTGTTAACCC+GGG | 0.610985 | 3.4:+86006986 | MS.gene013405:CDS |
| TAAGCAATAGAATACGTCAA+AGG | 0.613028 | 3.4:-86008213 | None:intergenic |
| TGGTGAAAGTGGAGTTACGT+TGG | 0.613545 | 3.4:-86006772 | None:intergenic |
| GGAAAGTAGCCGTTCCGGCA+CGG | 0.613745 | 3.4:-86006802 | None:intergenic |
| GGAAACAGAGCATGTTCCGC+CGG | 0.618328 | 3.4:-86006873 | None:intergenic |
| TGCTGCGAGTGCGCTTTGGT+AGG | 0.618475 | 3.4:-86007191 | None:intergenic |
| TGGATGGGTTTGAACAGAGA+GGG | 0.620381 | 3.4:-86006904 | None:intergenic |
| AAAACTCCAACTAAAATCAA+CGG | 0.623367 | 3.4:-86008111 | None:intergenic |
| GTCAAACTGATCAACCTCAA+AGG | 0.625363 | 3.4:+86006654 | MS.gene013405:CDS |
| GTTTCGAAACACGAAAGTAA+CGG | 0.626465 | 3.4:+86007645 | MS.gene013405:CDS |
| TCATGAGTATTTCAAGAAGG+TGG | 0.628281 | 3.4:+86007699 | MS.gene013405:CDS |
| CGATTATAATAAAGCCCACA+AGG | 0.628686 | 3.4:-86007552 | None:intergenic |
| ACCGTTAGTTTACTTCCAGG+TGG | 0.631433 | 3.4:+86007466 | MS.gene013405:CDS |
| AAACTGCATACTCAAATGGA+GGG | 0.632040 | 3.4:+86006632 | None:intergenic |
| GAACGTTGTATTCTATGGCA+AGG | 0.632846 | 3.4:+86007839 | MS.gene013405:CDS |
| CACACGATAAAATCCACAGC+AGG | 0.633084 | 3.4:+86007730 | MS.gene013405:CDS |
| AGTATCATTGTCACAAACGC+AGG | 0.635330 | 3.4:-86008186 | None:intergenic |
| TCATCCACTTTAGTCACACT+CGG | 0.635622 | 3.4:+86007385 | MS.gene013405:CDS |
| AATGAGATGAAGTGTTGGGC+CGG | 0.636832 | 3.4:-86006945 | None:intergenic |
| CCATGATGAAGCAACCAATG+AGG | 0.637485 | 3.4:-86007069 | None:intergenic |
| GGTGGTCCAATAGCCCAAGC+CGG | 0.637635 | 3.4:-86008090 | None:intergenic |
| AGACTTGATCGTCGCAACCG+TGG | 0.637658 | 3.4:+86007039 | MS.gene013405:CDS |
| GACGGCGAGGATGTAAGCCA+TGG | 0.639305 | 3.4:-86006828 | None:intergenic |
| GCCGGAATCGAAGCCAACAA+CGG | 0.641962 | 3.4:-86008072 | None:intergenic |
| CGAGGATGTAAGCCATGGTG+AGG | 0.641965 | 3.4:-86006823 | None:intergenic |
| CGTTCCGGCACGGAGTTCGG+TGG | 0.642018 | 3.4:-86006792 | None:intergenic |
| TCAATCTCAAGTCAATGGGG+TGG | 0.649645 | 3.4:+86008362 | MS.gene013405:CDS |
| GGCATAGCCCGGGTTAACAG+GGG | 0.652581 | 3.4:-86006993 | None:intergenic |
| TCCACCTGGAAGTAAACTAA+CGG | 0.660353 | 3.4:-86007467 | None:intergenic |
| GTTAGAATAAGCTCCTCCGC+CGG | 0.662382 | 3.4:+86007295 | MS.gene013405:CDS |
| GCCGGAATCAGTTAGAATGG+AGG | 0.674641 | 3.4:-86006855 | None:intergenic |
| ATGCCACGTCGATTGTGGTG+GGG | 0.676120 | 3.4:+86007923 | MS.gene013405:CDS |
| CGACCCCACCACAATCGACG+TGG | 0.676358 | 3.4:-86007926 | None:intergenic |
| TTCTCAATCTCAAGTCAATG+GGG | 0.684014 | 3.4:+86008359 | MS.gene013405:CDS |
| ACTAACGGTTCCGCTAAGGG+CGG | 0.685430 | 3.4:-86007452 | None:intergenic |
| ATGGATGGGTTTGAACAGAG+AGG | 0.686685 | 3.4:-86006905 | None:intergenic |
| TCCACTTTAGTCACACTCGG+TGG | 0.687536 | 3.4:+86007388 | MS.gene013405:CDS |
| TCCATTCTAACTGATTCCGG+CGG | 0.703938 | 3.4:+86006857 | MS.gene013405:CDS |
| GCTTTGGTAGGAGATAGTGC+CGG | 0.718145 | 3.4:-86007179 | None:intergenic |
| CTCATGAGCTGAATCACCGG+CGG | 0.724265 | 3.4:-86007683 | None:intergenic |
| TCAACGGGGATAAGAGAAGG+GGG | 0.727255 | 3.4:+86007988 | MS.gene013405:CDS |
| GGAGCCATGAAAGCCCACGA+CGG | 0.728697 | 3.4:-86007158 | None:intergenic |
| ACTCCAACTAAAATCAACGG+TGG | 0.737212 | 3.4:-86008108 | None:intergenic |
| CGTTTATTGAGTCTTCAACG+GGG | 0.769550 | 3.4:+86007974 | MS.gene013405:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTACATTGTGTTGAATATTT+GGG | + | chr3.4:86008260-86008279 | MS.gene013405:CDS | 20.0% |
| ! | AAAACTCCAACTAAAATCAA+CGG | - | chr3.4:86008114-86008133 | None:intergenic | 25.0% |
| ! | CTTACATTGTGTTGAATATT+TGG | + | chr3.4:86008259-86008278 | MS.gene013405:CDS | 25.0% |
| ! | GAAGAATTATTAGCACTATT+TGG | - | chr3.4:86008342-86008361 | None:intergenic | 25.0% |
| ! | TGTTTAGTAAAAAACGTGAA+AGG | + | chr3.4:86007580-86007599 | MS.gene013405:CDS | 25.0% |
| !! | ACAATATTTTGCGTTTATGT+CGG | + | chr3.4:86007900-86007919 | MS.gene013405:CDS | 25.0% |
| CTTCAAAACAATCAAGGTAT+CGG | + | chr3.4:86007346-86007365 | MS.gene013405:CDS | 30.0% | |
| TAAGCAATAGAATACGTCAA+AGG | - | chr3.4:86008216-86008235 | None:intergenic | 30.0% | |
| TGACGTATTCTATTGCTTAT+GGG | + | chr3.4:86008217-86008236 | MS.gene013405:CDS | 30.0% | |
| TTCTTACTCATTTCATCAGT+CGG | + | chr3.4:86007235-86007254 | MS.gene013405:CDS | 30.0% | |
| TTGACGTATTCTATTGCTTA+TGG | + | chr3.4:86008216-86008235 | MS.gene013405:CDS | 30.0% | |
| ! | TGTGGTAACATTTTTATACG+TGG | + | chr3.4:86007798-86007817 | MS.gene013405:CDS | 30.0% |
| ! | TGTGTTGAATATTTGGGATT+GGG | + | chr3.4:86008266-86008285 | MS.gene013405:CDS | 30.0% |
| ! | TTCAAAACAATCAAGGTATC+GGG | + | chr3.4:86007347-86007366 | MS.gene013405:CDS | 30.0% |
| ! | TTGTGTTGAATATTTGGGAT+TGG | + | chr3.4:86008265-86008284 | MS.gene013405:CDS | 30.0% |
| !! | AGTTTTAACAGCATAGGAAA+AGG | + | chr3.4:86007760-86007779 | MS.gene013405:CDS | 30.0% |
| !! | GTTTTAACAGCATAGGAAAA+GGG | + | chr3.4:86007761-86007780 | MS.gene013405:CDS | 30.0% |
| !!! | CATAGGAAAAGGGTATTTTT+GGG | + | chr3.4:86007771-86007790 | MS.gene013405:CDS | 30.0% |
| AGCTCATGAGTATTTCAAGA+AGG | + | chr3.4:86007696-86007715 | MS.gene013405:CDS | 35.0% | |
| AGTTGTAGTGCTTTAGCATT+TGG | - | chr3.4:86008420-86008439 | None:intergenic | 35.0% | |
| CGATTATAATAAAGCCCACA+AGG | - | chr3.4:86007555-86007574 | None:intergenic | 35.0% | |
| CTTCTCAATCTCAAGTCAAT+GGG | + | chr3.4:86008358-86008377 | MS.gene013405:CDS | 35.0% | |
| GCAAATTTGCATGAGATATC+AGG | - | chr3.4:86006974-86006993 | None:intergenic | 35.0% | |
| GTTCGTTACAAAAACACCAA+AGG | + | chr3.4:86008314-86008333 | MS.gene013405:CDS | 35.0% | |
| GTTTCGAAACACGAAAGTAA+CGG | + | chr3.4:86007645-86007664 | MS.gene013405:CDS | 35.0% | |
| TACGTAGCTAAAACAAGACT+AGG | + | chr3.4:86006731-86006750 | MS.gene013405:CDS | 35.0% | |
| TCATGAGTATTTCAAGAAGG+TGG | + | chr3.4:86007699-86007718 | MS.gene013405:CDS | 35.0% | |
| TCTATTGCTTATGGGCTTAT+TGG | + | chr3.4:86008225-86008244 | MS.gene013405:CDS | 35.0% | |
| TCTTCTCAATCTCAAGTCAA+TGG | + | chr3.4:86008357-86008376 | MS.gene013405:CDS | 35.0% | |
| TTCTCAATCTCAAGTCAATG+GGG | + | chr3.4:86008359-86008378 | MS.gene013405:CDS | 35.0% | |
| ! | ATTTTGTCTCCGTGATAGAA+TGG | + | chr3.4:86007507-86007526 | MS.gene013405:CDS | 35.0% |
| ! | CTCAAAATTTCCGTTTTCGT+CGG | - | chr3.4:86007878-86007897 | None:intergenic | 35.0% |
| ! | GACGAAAACGGAAATTTTGA+GGG | + | chr3.4:86007877-86007896 | MS.gene013405:CDS | 35.0% |
| ! | GTGTTGAATATTTGGGATTG+GGG | + | chr3.4:86008267-86008286 | MS.gene013405:CDS | 35.0% |
| ! | TGTTGAATATTTGGGATTGG+GGG | + | chr3.4:86008268-86008287 | MS.gene013405:CDS | 35.0% |
| ! | TTTTCGTAACAGCAATTTCG+TGG | + | chr3.4:86007623-86007642 | MS.gene013405:CDS | 35.0% |
| !! | GCGTTAAGTTTTAACAGCAT+AGG | + | chr3.4:86007754-86007773 | MS.gene013405:CDS | 35.0% |
| !!! | AGTTTTGATGATGAGATCAG+TGG | + | chr3.4:86008128-86008147 | MS.gene013405:CDS | 35.0% |
| !!! | GCATAGGAAAAGGGTATTTT+TGG | + | chr3.4:86007770-86007789 | MS.gene013405:CDS | 35.0% |
| !!! | GTTGTTTTTTACACCGTTGT+TGG | + | chr3.4:86008059-86008078 | MS.gene013405:CDS | 35.0% |
| !!! | TAGTCTTGTTTTAGCTACGT+AGG | - | chr3.4:86006732-86006751 | None:intergenic | 35.0% |
| ACTCCAACTAAAATCAACGG+TGG | - | chr3.4:86008111-86008130 | None:intergenic | 40.0% | |
| AGTATCATTGTCACAAACGC+AGG | - | chr3.4:86008189-86008208 | None:intergenic | 40.0% | |
| ATACTCATGAGCTGAATCAC+CGG | - | chr3.4:86007689-86007708 | None:intergenic | 40.0% | |
| ATCGGGCTTCAAAACAATCA+AGG | + | chr3.4:86007340-86007359 | MS.gene013405:CDS | 40.0% | |
| ATCTCTACCTCAAACTGTAC+CGG | + | chr3.4:86006926-86006945 | MS.gene013405:CDS | 40.0% | |
| ATTGCTTATGGGCTTATTGG+TGG | + | chr3.4:86008228-86008247 | MS.gene013405:CDS | 40.0% | |
| CATGATGAAGCAACCAATGA+GGG | - | chr3.4:86007071-86007090 | None:intergenic | 40.0% | |
| CGTTTATTGAGTCTTCAACG+GGG | + | chr3.4:86007974-86007993 | MS.gene013405:CDS | 40.0% | |
| GAACGTTGTATTCTATGGCA+AGG | + | chr3.4:86007839-86007858 | MS.gene013405:CDS | 40.0% | |
| GACAGGAACGTTGTATTCTA+TGG | + | chr3.4:86007834-86007853 | MS.gene013405:CDS | 40.0% | |
| GCGTTTATTGAGTCTTCAAC+GGG | + | chr3.4:86007973-86007992 | MS.gene013405:CDS | 40.0% | |
| GGCGTTTATTGAGTCTTCAA+CGG | + | chr3.4:86007972-86007991 | MS.gene013405:CDS | 40.0% | |
| GTCAAACTGATCAACCTCAA+AGG | + | chr3.4:86006654-86006673 | MS.gene013405:CDS | 40.0% | |
| GTGAAAGGAGCAATGATCTA+CGG | + | chr3.4:86007595-86007614 | MS.gene013405:CDS | 40.0% | |
| TAAACTAACGGTTCCGCTAA+GGG | - | chr3.4:86007458-86007477 | None:intergenic | 40.0% | |
| TAGTTTACTTCCAGGTGGAA+CGG | + | chr3.4:86007471-86007490 | MS.gene013405:CDS | 40.0% | |
| TCATCCACTTTAGTCACACT+CGG | + | chr3.4:86007385-86007404 | MS.gene013405:CDS | 40.0% | |
| TCCACCTGGAAGTAAACTAA+CGG | - | chr3.4:86007470-86007489 | None:intergenic | 40.0% | |
| TTGCGACGATCAAGTCTTTA+CGG | - | chr3.4:86007036-86007055 | None:intergenic | 40.0% | |
| TTGCTTATGGGCTTATTGGT+GGG | + | chr3.4:86008229-86008248 | MS.gene013405:CDS | 40.0% | |
| TTGGGCTTTCCATTCTATCA+CGG | - | chr3.4:86007519-86007538 | None:intergenic | 40.0% | |
| ! | AGTTTGAGGTAGAGATGGAT+GGG | - | chr3.4:86006922-86006941 | None:intergenic | 40.0% |
| ! | ATCAGTGGTGGAGATTGATT+GGG | + | chr3.4:86008143-86008162 | MS.gene013405:CDS | 40.0% |
| ! | CGACGAAAACGGAAATTTTG+AGG | + | chr3.4:86007876-86007895 | MS.gene013405:CDS | 40.0% |
| ! | CTCATTGGTTGCTTCATCAT+GGG | + | chr3.4:86007070-86007089 | MS.gene013405:CDS | 40.0% |
| ! | GCTGAATGAGATGAAGTGTT+GGG | - | chr3.4:86006952-86006971 | None:intergenic | 40.0% |
| ! | GCTTTTGCTAATCTCCCTTT+AGG | + | chr3.4:86007094-86007113 | MS.gene013405:CDS | 40.0% |
| ! | TTAGCACTATTTGGCTCCTT+TGG | - | chr3.4:86008333-86008352 | None:intergenic | 40.0% |
| !! | ACGGGTTTTATCAAGACAAG+CGG | - | chr3.4:86007017-86007036 | None:intergenic | 40.0% |
| !! | ATTGGGGGTTTGAGATTTTG+GGG | + | chr3.4:86008283-86008302 | MS.gene013405:CDS | 40.0% |
| !! | GATTGGGGGTTTGAGATTTT+GGG | + | chr3.4:86008282-86008301 | MS.gene013405:CDS | 40.0% |
| !! | TTTGATGATGAGATCAGTGG+TGG | + | chr3.4:86008131-86008150 | MS.gene013405:CDS | 40.0% |
| !!! | TTGAGATTTTGGGGCACTAT+GGG | + | chr3.4:86008292-86008311 | MS.gene013405:CDS | 40.0% |
| !!! | TTTGAGATTTTGGGGCACTA+TGG | + | chr3.4:86008291-86008310 | MS.gene013405:CDS | 40.0% |
| AAAACTTAACGCACCTGCTG+TGG | - | chr3.4:86007746-86007765 | None:intergenic | 45.0% | |
| AAATTTGCCCCTGTTAACCC+GGG | + | chr3.4:86006986-86007005 | MS.gene013405:CDS | 45.0% | |
| ATAAGAGAAGGGGGAAGAAC+GGG | + | chr3.4:86007997-86008016 | MS.gene013405:CDS | 45.0% | |
| CAAATTTGCCCCTGTTAACC+CGG | + | chr3.4:86006985-86007004 | MS.gene013405:CDS | 45.0% | |
| CACACGATAAAATCCACAGC+AGG | + | chr3.4:86007730-86007749 | MS.gene013405:CDS | 45.0% | |
| CCATGATGAAGCAACCAATG+AGG | - | chr3.4:86007072-86007091 | None:intergenic | 45.0% | |
| CTTCAACGGGGATAAGAGAA+GGG | + | chr3.4:86007986-86008005 | MS.gene013405:CDS | 45.0% | |
| GACTCAATAAACGCCGTTAC+CGG | - | chr3.4:86007967-86007986 | None:intergenic | 45.0% | |
| GATAAGAGAAGGGGGAAGAA+CGG | + | chr3.4:86007996-86008015 | MS.gene013405:CDS | 45.0% | |
| GGCTGAATGAGATGAAGTGT+TGG | - | chr3.4:86006953-86006972 | None:intergenic | 45.0% | |
| GGTGAAAGTGGAGTTACGTT+GGG | - | chr3.4:86006774-86006793 | None:intergenic | 45.0% | |
| GTAAACTAACGGTTCCGCTA+AGG | - | chr3.4:86007459-86007478 | None:intergenic | 45.0% | |
| GTCGTTGTTAGGAACTTCAC+CGG | + | chr3.4:86007945-86007964 | MS.gene013405:CDS | 45.0% | |
| GTTAGGAACTTCACCGGTAA+CGG | + | chr3.4:86007951-86007970 | MS.gene013405:CDS | 45.0% | |
| TACTTTGCTTACACCGTCGT+GGG | + | chr3.4:86007145-86007164 | MS.gene013405:CDS | 45.0% | |
| TATGGGCTTATTGGTGGGAT+TGG | + | chr3.4:86008234-86008253 | MS.gene013405:CDS | 45.0% | |
| TATTCTATGGCAAGGTTCGC+AGG | + | chr3.4:86007847-86007866 | MS.gene013405:CDS | 45.0% | |
| TCAATCTCAAGTCAATGGGG+TGG | + | chr3.4:86008362-86008381 | MS.gene013405:CDS | 45.0% | |
| TCTTCAACGGGGATAAGAGA+AGG | + | chr3.4:86007985-86008004 | MS.gene013405:CDS | 45.0% | |
| TGAACAGAGAGGGACACAAT+CGG | - | chr3.4:86006897-86006916 | None:intergenic | 45.0% | |
| TGCGACGATCAAGTCTTTAC+GGG | - | chr3.4:86007035-86007054 | None:intergenic | 45.0% | |
| TGGTGAAAGTGGAGTTACGT+TGG | - | chr3.4:86006775-86006794 | None:intergenic | 45.0% | |
| TTACTTTGCTTACACCGTCG+TGG | + | chr3.4:86007144-86007163 | MS.gene013405:CDS | 45.0% | |
| TTCAACGGGGATAAGAGAAG+GGG | + | chr3.4:86007987-86008006 | MS.gene013405:CDS | 45.0% | |
| ! | ACCGTTAGTTTACTTCCAGG+TGG | + | chr3.4:86007466-86007485 | MS.gene013405:CDS | 45.0% |
| ! | ATGGATGGGTTTGAACAGAG+AGG | - | chr3.4:86006908-86006927 | None:intergenic | 45.0% |
| ! | CAGTTTGAGGTAGAGATGGA+TGG | - | chr3.4:86006923-86006942 | None:intergenic | 45.0% |
| ! | CCTCATTGGTTGCTTCATCA+TGG | + | chr3.4:86007069-86007088 | MS.gene013405:CDS | 45.0% |
| ! | GATCAGTGGTGGAGATTGAT+TGG | + | chr3.4:86008142-86008161 | MS.gene013405:CDS | 45.0% |
| ! | GCCTCCATTCTAACTGATTC+CGG | + | chr3.4:86006854-86006873 | MS.gene013405:CDS | 45.0% |
| ! | GGAACCGTTAGTTTACTTCC+AGG | + | chr3.4:86007463-86007482 | MS.gene013405:CDS | 45.0% |
| ! | GGTACAGTTTGAGGTAGAGA+TGG | - | chr3.4:86006927-86006946 | None:intergenic | 45.0% |
| ! | TCCATTCTAACTGATTCCGG+CGG | + | chr3.4:86006857-86006876 | MS.gene013405:CDS | 45.0% |
| ! | TGGATGGGTTTGAACAGAGA+GGG | - | chr3.4:86006907-86006926 | None:intergenic | 45.0% |
| !! | AATGAGATGAAGTGTTGGGC+CGG | - | chr3.4:86006948-86006967 | None:intergenic | 45.0% |
| !! | AGTTAGAATGGAGGCGTTGA+CGG | - | chr3.4:86006849-86006868 | None:intergenic | 45.0% |
| !! | GAGCTTATTCTAACGGGCTT+TGG | - | chr3.4:86007289-86007308 | None:intergenic | 45.0% |
| !! | GGATTGGGGGTTTGAGATTT+TGG | + | chr3.4:86008281-86008300 | MS.gene013405:CDS | 45.0% |
| !! | GGCTTTTTCTCGCTTTCATC+GGG | + | chr3.4:86007323-86007342 | MS.gene013405:CDS | 45.0% |
| !! | GGGCTTTTTCTCGCTTTCAT+CGG | + | chr3.4:86007322-86007341 | MS.gene013405:CDS | 45.0% |
| !! | TAGGTGTTGAAGCGAGAGAT+GGG | - | chr3.4:86006713-86006732 | None:intergenic | 45.0% |
| !!! | AGGGTATTTTTGGGAAGCTG+TGG | + | chr3.4:86007780-86007799 | MS.gene013405:CDS | 45.0% |
| !!! | GGACCACCGTTGATTTTAGT+TGG | + | chr3.4:86008105-86008124 | MS.gene013405:CDS | 45.0% |
| !!! | GGTGGCGGGTTATTTTTTCA+TGG | + | chr3.4:86008035-86008054 | MS.gene013405:CDS | 45.0% |
| AAAGAAGCCCGTGATGAGCT+TGG | - | chr3.4:86007418-86007437 | None:intergenic | 50.0% | |
| AAGAAGCCCGTGATGAGCTT+GGG | - | chr3.4:86007417-86007436 | None:intergenic | 50.0% | |
| ACCAATGAGGGAAGAAGCCA+CGG | - | chr3.4:86007059-86007078 | None:intergenic | 50.0% | |
| ACCACCGAGTGTGACTAAAG+TGG | - | chr3.4:86007392-86007411 | None:intergenic | 50.0% | |
| AGCGAGAAAAAGCCCGATAC+CGG | - | chr3.4:86007317-86007336 | None:intergenic | 50.0% | |
| ATACCTGGAGCAAGGCCTAA+AGG | - | chr3.4:86007112-86007131 | None:intergenic | 50.0% | |
| GAAAGCCCAACACTCTGGTT+GGG | + | chr3.4:86007529-86007548 | MS.gene013405:CDS | 50.0% | |
| GAATGGAAAGCCCAACACTC+TGG | + | chr3.4:86007524-86007543 | MS.gene013405:CDS | 50.0% | |
| GCAGGTTTCACCGACGAAAA+CGG | + | chr3.4:86007865-86007884 | MS.gene013405:CDS | 50.0% | |
| GCCGGAATCAGTTAGAATGG+AGG | - | chr3.4:86006858-86006877 | None:intergenic | 50.0% | |
| GCGGAGGAGCTTATTCTAAC+GGG | - | chr3.4:86007295-86007314 | None:intergenic | 50.0% | |
| GCTTTGGTAGGAGATAGTGC+CGG | - | chr3.4:86007182-86007201 | None:intergenic | 50.0% | |
| GGCGGAGGAGCTTATTCTAA+CGG | - | chr3.4:86007296-86007315 | None:intergenic | 50.0% | |
| GTTAGAATAAGCTCCTCCGC+CGG | + | chr3.4:86007295-86007314 | MS.gene013405:CDS | 50.0% | |
| TAAGAGAAGGGGGAAGAACG+GGG | + | chr3.4:86007998-86008017 | MS.gene013405:CDS | 50.0% | |
| TAAGCGTTTGAGCCCATACC+TGG | - | chr3.4:86007127-86007146 | None:intergenic | 50.0% | |
| TACCTGGAGCAAGGCCTAAA+GGG | - | chr3.4:86007111-86007130 | None:intergenic | 50.0% | |
| TCAACGGGGATAAGAGAAGG+GGG | + | chr3.4:86007988-86008007 | MS.gene013405:CDS | 50.0% | |
| TCCACTTTAGTCACACTCGG+TGG | + | chr3.4:86007388-86007407 | MS.gene013405:CDS | 50.0% | |
| TCCGCCGGAATCAGTTAGAA+TGG | - | chr3.4:86006861-86006880 | None:intergenic | 50.0% | |
| TTAGGCCTTGCTCCAGGTAT+GGG | + | chr3.4:86007112-86007131 | MS.gene013405:CDS | 50.0% | |
| TTTAGGCCTTGCTCCAGGTA+TGG | + | chr3.4:86007111-86007130 | MS.gene013405:CDS | 50.0% | |
| ! | AACGGCTACTTTCCTCACCA+TGG | + | chr3.4:86006811-86006830 | MS.gene013405:CDS | 50.0% |
| ! | ATTGTGGTGGGGTCGTTGTT+AGG | + | chr3.4:86007934-86007953 | MS.gene013405:CDS | 50.0% |
| ! | CTCGCAGCAGTTTTCATCGA+AGG | + | chr3.4:86007205-86007224 | MS.gene013405:CDS | 50.0% |
| !! | AATCAAGGTATCGGGCTCGT+TGG | + | chr3.4:86007355-86007374 | MS.gene013405:CDS | 50.0% |
| !! | ACCGTTGTTGGCTTCGATTC+CGG | + | chr3.4:86008071-86008090 | MS.gene013405:CDS | 50.0% |
| !! | ATCAAGGTATCGGGCTCGTT+GGG | + | chr3.4:86007356-86007375 | MS.gene013405:CDS | 50.0% |
| !! | GTAGGTGTTGAAGCGAGAGA+TGG | - | chr3.4:86006714-86006733 | None:intergenic | 50.0% |
| AAACTGCTGCGAGTGCGCTT+TGG | - | chr3.4:86007198-86007217 | None:intergenic | 55.0% | |
| AACACTCTGGTTGGGCCTTG+TGG | + | chr3.4:86007537-86007556 | MS.gene013405:CDS | 55.0% | |
| ACAAGGCCCAACCAGAGTGT+TGG | - | chr3.4:86007538-86007557 | None:intergenic | 55.0% | |
| ACCGTGGCTTCTTCCCTCAT+TGG | + | chr3.4:86007055-86007074 | MS.gene013405:CDS | 55.0% | |
| ACTAACGGTTCCGCTAAGGG+CGG | - | chr3.4:86007455-86007474 | None:intergenic | 55.0% | |
| AGACTTGATCGTCGCAACCG+TGG | + | chr3.4:86007039-86007058 | MS.gene013405:CDS | 55.0% | |
| AGGGGGAAGAACGGGGATAA+CGG | + | chr3.4:86008005-86008024 | MS.gene013405:CDS | 55.0% | |
| ATAAGCTCCTCCGCCGGTAT+CGG | + | chr3.4:86007301-86007320 | MS.gene013405:CDS | 55.0% | |
| ATCACGGGCTTCTTTAGCGC+CGG | + | chr3.4:86007423-86007442 | MS.gene013405:CDS | 55.0% | |
| CCGCTAAGGGCGGTTATAAC+CGG | - | chr3.4:86007445-86007464 | None:intergenic | 55.0% | |
| CCGGTTATAACCGCCCTTAG+CGG | + | chr3.4:86007442-86007461 | MS.gene013405:CDS | 55.0% | |
| CGAGGATGTAAGCCATGGTG+AGG | - | chr3.4:86006826-86006845 | None:intergenic | 55.0% | |
| CTCATGAGCTGAATCACCGG+CGG | - | chr3.4:86007686-86007705 | None:intergenic | 55.0% | |
| CTTCCAGGTGGAACGGTTTC+TGG | + | chr3.4:86007478-86007497 | MS.gene013405:CDS | 55.0% | |
| GAGAAAAAGCCCGATACCGG+CGG | - | chr3.4:86007314-86007333 | None:intergenic | 55.0% | |
| GCCGGAATCGAAGCCAACAA+CGG | - | chr3.4:86008075-86008094 | None:intergenic | 55.0% | |
| GGAAACAGAGCATGTTCCGC+CGG | - | chr3.4:86006876-86006895 | None:intergenic | 55.0% | |
| GGAAAGCCCAACACTCTGGT+TGG | + | chr3.4:86007528-86007547 | MS.gene013405:CDS | 55.0% | |
| GGTGAGGAAAGTAGCCGTTC+CGG | - | chr3.4:86006810-86006829 | None:intergenic | 55.0% | |
| GTGGACATTCTCGACACGAC+AGG | + | chr3.4:86007817-86007836 | MS.gene013405:CDS | 55.0% | |
| GTGGTTGCCCAAGCTCATCA+CGG | + | chr3.4:86007407-86007426 | MS.gene013405:CDS | 55.0% | |
| TACACCGTCGTGGGCTTTCA+TGG | + | chr3.4:86007154-86007173 | MS.gene013405:CDS | 55.0% | |
| TCAAGACAAGCGGCATAGCC+CGG | - | chr3.4:86007007-86007026 | None:intergenic | 55.0% | |
| TCACCAGAAACCGTTCCACC+TGG | - | chr3.4:86007484-86007503 | None:intergenic | 55.0% | |
| TGGTTGCCCAAGCTCATCAC+GGG | + | chr3.4:86007408-86007427 | MS.gene013405:CDS | 55.0% | |
| TGTTGGGCCGGTACAGTTTG+AGG | - | chr3.4:86006936-86006955 | None:intergenic | 55.0% | |
| TTGAGCCCATACCTGGAGCA+AGG | - | chr3.4:86007120-86007139 | None:intergenic | 55.0% | |
| ! | AACGGGGATAACGGCGTTGA+CGG | + | chr3.4:86008014-86008033 | MS.gene013405:CDS | 55.0% |
| ! | ACACTCTGGTTGGGCCTTGT+GGG | + | chr3.4:86007538-86007557 | MS.gene013405:CDS | 55.0% |
| ! | ACGGAGTTCGGTGGTGAAAG+TGG | - | chr3.4:86006786-86006805 | None:intergenic | 55.0% |
| ! | AGATGGGCTTTGTGTGGGCT+TGG | - | chr3.4:86006697-86006716 | None:intergenic | 55.0% |
| ! | AGCGAGAGATGGGCTTTGTG+TGG | - | chr3.4:86006703-86006722 | None:intergenic | 55.0% |
| ! | ATGCCACGTCGATTGTGGTG+GGG | + | chr3.4:86007923-86007942 | MS.gene013405:CDS | 55.0% |
| ! | CAAGGCCCAACCAGAGTGTT+GGG | - | chr3.4:86007537-86007556 | None:intergenic | 55.0% |
| ! | GATGCCACGTCGATTGTGGT+GGG | + | chr3.4:86007922-86007941 | MS.gene013405:CDS | 55.0% |
| ! | GCGAGAGATGGGCTTTGTGT+GGG | - | chr3.4:86006702-86006721 | None:intergenic | 55.0% |
| ! | GTTGGCTTCGATTCCGGCTT+GGG | + | chr3.4:86008077-86008096 | MS.gene013405:CDS | 55.0% |
| !! | TCGATTCCGGCTTGGGCTAT+TGG | + | chr3.4:86008084-86008103 | MS.gene013405:CDS | 55.0% |
| !! | TGTTGGCTTCGATTCCGGCT+TGG | + | chr3.4:86008076-86008095 | MS.gene013405:CDS | 55.0% |
| AAAAAGCCCGATACCGGCGG+AGG | - | chr3.4:86007311-86007330 | None:intergenic | 60.0% | |
| ATGAGCTGAATCACCGGCGG+CGG | - | chr3.4:86007683-86007702 | None:intergenic | 60.0% | |
| CAAGACAAGCGGCATAGCCC+GGG | - | chr3.4:86007006-86007025 | None:intergenic | 60.0% | |
| CGGCATAGCCCGGGTTAACA+GGG | - | chr3.4:86006997-86007016 | None:intergenic | 60.0% | |
| CTCCCTTTAGGCCTTGCTCC+AGG | + | chr3.4:86007106-86007125 | MS.gene013405:CDS | 60.0% | |
| GACGGCGAGGATGTAAGCCA+TGG | - | chr3.4:86006831-86006850 | None:intergenic | 60.0% | |
| GGAAAGTAGCCGTTCCGGCA+CGG | - | chr3.4:86006805-86006824 | None:intergenic | 60.0% | |
| GGAGCCATGAAAGCCCACGA+CGG | - | chr3.4:86007161-86007180 | None:intergenic | 60.0% | |
| GGCATAGCCCGGGTTAACAG+GGG | - | chr3.4:86006996-86007015 | None:intergenic | 60.0% | |
| GGTGGTCCAATAGCCCAAGC+CGG | - | chr3.4:86008093-86008112 | None:intergenic | 60.0% | |
| GTCGTGGGCTTTCATGGCTC+CGG | + | chr3.4:86007160-86007179 | MS.gene013405:CDS | 60.0% | |
| TAAGCTCCTCCGCCGGTATC+GGG | + | chr3.4:86007302-86007321 | MS.gene013405:CDS | 60.0% | |
| TGCTGCGAGTGCGCTTTGGT+AGG | - | chr3.4:86007194-86007213 | None:intergenic | 60.0% | |
| TTCACCACCGAACTCCGTGC+CGG | + | chr3.4:86006788-86006807 | MS.gene013405:CDS | 60.0% | |
| ! | GGATGCCACGTCGATTGTGG+TGG | + | chr3.4:86007921-86007940 | MS.gene013405:CDS | 60.0% |
| ! | GGGCTTTGTGTGGGCTTGGT+GGG | - | chr3.4:86006693-86006712 | None:intergenic | 60.0% |
| ! | GTCGGATGCCACGTCGATTG+TGG | + | chr3.4:86007918-86007937 | MS.gene013405:CDS | 60.0% |
| ! | TGGGCTTTGTGTGGGCTTGG+TGG | - | chr3.4:86006694-86006713 | None:intergenic | 60.0% |
| !! | ATAACGGCGTTGACGGTGGC+GGG | + | chr3.4:86008021-86008040 | MS.gene013405:CDS | 60.0% |
| !! | GATAACGGCGTTGACGGTGG+CGG | + | chr3.4:86008020-86008039 | MS.gene013405:CDS | 60.0% |
| !! | TTTGTGTGGGCTTGGTGGGC+TGG | - | chr3.4:86006689-86006708 | None:intergenic | 60.0% |
| AGCCGTTCCGGCACGGAGTT+CGG | - | chr3.4:86006798-86006817 | None:intergenic | 65.0% | |
| CACCGAACTCCGTGCCGGAA+CGG | + | chr3.4:86006793-86006812 | MS.gene013405:CDS | 65.0% | |
| CGACCCCACCACAATCGACG+TGG | - | chr3.4:86007929-86007948 | None:intergenic | 65.0% | |
| GAATCACCGGCGGCGGTGTT+AGG | - | chr3.4:86007676-86007695 | None:intergenic | 65.0% | |
| GCGGCATAGCCCGGGTTAAC+AGG | - | chr3.4:86006998-86007017 | None:intergenic | 65.0% | |
| GCGTTTCCTAACACCGCCGC+CGG | + | chr3.4:86007667-86007686 | MS.gene013405:CDS | 65.0% | |
| GCTGGAAGTGGGGGCCTTTG+AGG | - | chr3.4:86006671-86006690 | None:intergenic | 65.0% | |
| !! | GAATGGAGGCGTTGACGGCG+AGG | - | chr3.4:86006844-86006863 | None:intergenic | 65.0% |
| !! | GCTTGGTGGGCTGGAAGTGG+GGG | - | chr3.4:86006680-86006699 | None:intergenic | 65.0% |
| !! | GGCTTGGTGGGCTGGAAGTG+GGG | - | chr3.4:86006681-86006700 | None:intergenic | 65.0% |
| !! | GGGCTTGGTGGGCTGGAAGT+GGG | - | chr3.4:86006682-86006701 | None:intergenic | 65.0% |
| !! | GGGGATAACGGCGTTGACGG+TGG | + | chr3.4:86008017-86008036 | MS.gene013405:CDS | 65.0% |
| !! | TGGGCTTGGTGGGCTGGAAG+TGG | - | chr3.4:86006683-86006702 | None:intergenic | 65.0% |
| CGTTCCGGCACGGAGTTCGG+TGG | - | chr3.4:86006795-86006814 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 86006647 | 86008452 | 86006647 | ID=MS.gene013405 |
| chr3.4 | mRNA | 86006647 | 86008452 | 86006647 | ID=MS.gene013405.t1;Parent=MS.gene013405 |
| chr3.4 | exon | 86006647 | 86008452 | 86006647 | ID=MS.gene013405.t1.exon1;Parent=MS.gene013405.t1 |
| chr3.4 | CDS | 86006647 | 86008452 | 86006647 | ID=cds.MS.gene013405.t1;Parent=MS.gene013405.t1 |
| Gene Sequence |
| Protein sequence |
