Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98272.t1 | XP_013460947.1 | 97 | 540 | 14 | 1 | 1 | 538 | 1 | 540 | 2.40E-294 | 1020.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98272.t1 | Q84MA8 | 67.2 | 524 | 166 | 2 | 13 | 531 | 7 | 529 | 8.1e-203 | 708.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98272.t1 | A0A072UZW0 | 97.0 | 540 | 14 | 1 | 1 | 538 | 1 | 540 | 1.7e-294 | 1020.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene98272 | -0.806485 | 8.04E-50 | -1.69E-46 |
| MS.gene049222 | MS.gene98272 | -0.804093 | 2.55E-49 | -1.69E-46 |
| MS.gene04932 | MS.gene98272 | 0.839634 | 1.41E-57 | -1.69E-46 |
| MS.gene049549 | MS.gene98272 | 0.824865 | 6.40E-54 | -1.69E-46 |
| MS.gene050170 | MS.gene98272 | -0.810743 | 9.90E-51 | -1.69E-46 |
| MS.gene050647 | MS.gene98272 | 0.802171 | 6.37E-49 | -1.69E-46 |
| MS.gene051138 | MS.gene98272 | 0.812145 | 4.91E-51 | -1.69E-46 |
| MS.gene051364 | MS.gene98272 | 0.806924 | 6.50E-50 | -1.69E-46 |
| MS.gene051440 | MS.gene98272 | 0.811131 | 8.16E-51 | -1.69E-46 |
| MS.gene051651 | MS.gene98272 | 0.808005 | 3.83E-50 | -1.69E-46 |
| MS.gene051973 | MS.gene98272 | 0.800077 | 1.71E-48 | -1.69E-46 |
| MS.gene052211 | MS.gene98272 | 0.840864 | 6.73E-58 | -1.69E-46 |
| MS.gene052606 | MS.gene98272 | 0.973014 | 1.02E-135 | -1.69E-46 |
| MS.gene053033 | MS.gene98272 | 0.812685 | 3.74E-51 | -1.69E-46 |
| MS.gene053097 | MS.gene98272 | 0.809346 | 1.98E-50 | -1.69E-46 |
| MS.gene053406 | MS.gene98272 | 0.819414 | 1.18E-52 | -1.69E-46 |
| MS.gene053887 | MS.gene98272 | 0.815286 | 9.99E-52 | -1.69E-46 |
| MS.gene054146 | MS.gene98272 | 0.846088 | 2.71E-59 | -1.69E-46 |
| MS.gene054706 | MS.gene98272 | 0.808126 | 3.61E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene98272 | -0.836059 | 1.17E-56 | -1.69E-46 |
| MS.gene054884 | MS.gene98272 | 0.838296 | 3.13E-57 | -1.69E-46 |
| MS.gene055158 | MS.gene98272 | 0.836173 | 1.09E-56 | -1.69E-46 |
| MS.gene055240 | MS.gene98272 | 0.827233 | 1.75E-54 | -1.69E-46 |
| MS.gene055577 | MS.gene98272 | -0.806387 | 8.43E-50 | -1.69E-46 |
| MS.gene055729 | MS.gene98272 | 0.821855 | 3.23E-53 | -1.69E-46 |
| MS.gene055730 | MS.gene98272 | 0.817645 | 2.96E-52 | -1.69E-46 |
| MS.gene055731 | MS.gene98272 | 0.833236 | 5.99E-56 | -1.69E-46 |
| MS.gene05589 | MS.gene98272 | -0.831374 | 1.73E-55 | -1.69E-46 |
| MS.gene056218 | MS.gene98272 | 0.826544 | 2.56E-54 | -1.69E-46 |
| MS.gene056224 | MS.gene98272 | 0.813826 | 2.10E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene98272 | -0.80746 | 5.00E-50 | -1.69E-46 |
| MS.gene056590 | MS.gene98272 | 0.84006 | 1.09E-57 | -1.69E-46 |
| MS.gene056591 | MS.gene98272 | 0.839928 | 1.18E-57 | -1.69E-46 |
| MS.gene056694 | MS.gene98272 | 0.834318 | 3.21E-56 | -1.69E-46 |
| MS.gene056697 | MS.gene98272 | 0.820205 | 7.76E-53 | -1.69E-46 |
| MS.gene056748 | MS.gene98272 | 0.853291 | 2.63E-61 | -1.69E-46 |
| MS.gene056856 | MS.gene98272 | 0.824875 | 6.37E-54 | -1.69E-46 |
| MS.gene056988 | MS.gene98272 | 0.80838 | 3.19E-50 | -1.69E-46 |
| MS.gene057768 | MS.gene98272 | 0.839936 | 1.18E-57 | -1.69E-46 |
| MS.gene058158 | MS.gene98272 | 0.815785 | 7.74E-52 | -1.69E-46 |
| MS.gene058175 | MS.gene98272 | 0.801898 | 7.25E-49 | -1.69E-46 |
| MS.gene058334 | MS.gene98272 | 0.835025 | 2.13E-56 | -1.69E-46 |
| MS.gene058544 | MS.gene98272 | -0.804626 | 1.97E-49 | -1.69E-46 |
| MS.gene058603 | MS.gene98272 | 0.822326 | 2.51E-53 | -1.69E-46 |
| MS.gene058838 | MS.gene98272 | -0.824017 | 1.01E-53 | -1.69E-46 |
| MS.gene05914 | MS.gene98272 | -0.814711 | 1.34E-51 | -1.69E-46 |
| MS.gene059315 | MS.gene98272 | 0.817153 | 3.82E-52 | -1.69E-46 |
| MS.gene059526 | MS.gene98272 | 0.833107 | 6.45E-56 | -1.69E-46 |
| MS.gene05960 | MS.gene98272 | 0.846659 | 1.89E-59 | -1.69E-46 |
| MS.gene059892 | MS.gene98272 | 0.8085 | 3.00E-50 | -1.69E-46 |
| MS.gene059955 | MS.gene98272 | 0.802969 | 4.36E-49 | -1.69E-46 |
| MS.gene060087 | MS.gene98272 | 0.830461 | 2.90E-55 | -1.69E-46 |
| MS.gene060358 | MS.gene98272 | 0.817501 | 3.19E-52 | -1.69E-46 |
| MS.gene060593 | MS.gene98272 | 0.809578 | 1.77E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene98272 | -0.822182 | 2.72E-53 | -1.69E-46 |
| MS.gene061044 | MS.gene98272 | 0.839015 | 2.04E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31058 | MS.gene98272 | PPI |
| MS.gene06502 | MS.gene98272 | PPI |
| MS.gene98272 | MS.gene049377 | PPI |
| MS.gene013405 | MS.gene98272 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98272.t1 | MTR_3g075120 | 97.037 | 540 | 14 | 1 | 1 | 538 | 1 | 540 | 0.0 | 1067 |
| MS.gene98272.t1 | MTR_3g094320 | 49.013 | 557 | 239 | 5 | 25 | 537 | 28 | 583 | 0.0 | 554 |
| MS.gene98272.t1 | MTR_7g072600 | 53.571 | 56 | 26 | 0 | 182 | 237 | 18 | 73 | 7.49e-14 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98272.t1 | AT5G50300 | 67.562 | 521 | 163 | 2 | 13 | 528 | 24 | 543 | 0.0 | 720 |
| MS.gene98272.t1 | AT5G50300 | 67.562 | 521 | 163 | 2 | 13 | 528 | 7 | 526 | 0.0 | 720 |
| MS.gene98272.t1 | AT3G10960 | 49.911 | 561 | 237 | 5 | 19 | 535 | 19 | 579 | 0.0 | 568 |
Find 137 sgRNAs with CRISPR-Local
Find 157 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAAGCAAGCCCCAGTTTC+TGG | 0.095177 | 3.1:-61685287 | None:intergenic |
| AACCAAGGTGTTGGGCTTAT+TGG | 0.202923 | 3.1:+61685215 | MS.gene98272:CDS |
| GTTTGTAACGGCGTTGTTTA+TGG | 0.215211 | 3.1:-61684643 | None:intergenic |
| CATGCAAGCCTAATAGATTT+TGG | 0.220227 | 3.1:-61685146 | None:intergenic |
| GTTAAAGGTAGTATGATTTA+TGG | 0.226860 | 3.1:+61685386 | MS.gene98272:CDS |
| TGGGCCTGATCCGGCTAATT+TGG | 0.234839 | 3.1:+61685235 | MS.gene98272:CDS |
| CTTGCATGTGCTGCTGGTAT+TGG | 0.252498 | 3.1:+61685161 | MS.gene98272:CDS |
| AACTTCAATGGCTATTGTTT+TGG | 0.253159 | 3.1:+61685058 | MS.gene98272:CDS |
| AAGTTCTGGCTTGGAGCTTT+TGG | 0.263465 | 3.1:+61685329 | MS.gene98272:CDS |
| ACCAAGGTGTTGGGCTTATT+GGG | 0.273447 | 3.1:+61685216 | MS.gene98272:CDS |
| CCCAGAAACTGGGGCTTGCT+TGG | 0.280194 | 3.1:+61685286 | MS.gene98272:CDS |
| TTGCATGTGCTGCTGGTATT+GGG | 0.306219 | 3.1:+61685162 | MS.gene98272:CDS |
| CCATCACCAAGTGGTGTATC+AGG | 0.320339 | 3.1:-61685464 | None:intergenic |
| AAAAGTATCGACCCAGAAAC+TGG | 0.321079 | 3.1:+61685275 | MS.gene98272:CDS |
| AGTTGCAAAGCCCAAAGTTC+TGG | 0.334679 | 3.1:+61685315 | MS.gene98272:CDS |
| AAGCTCCAAGCCAGAACTTT+GGG | 0.337032 | 3.1:-61685325 | None:intergenic |
| ACTATTGTAGGGTCAGCTTT+AGG | 0.337994 | 3.1:+61685725 | MS.gene98272:CDS |
| ATGCTGCAAGCATCATAAAT+TGG | 0.340022 | 3.1:+61686077 | MS.gene98272:CDS |
| TTTAACCTTGTTGGTTATCA+TGG | 0.341914 | 3.1:+61685014 | MS.gene98272:CDS |
| TTAGGTCTTGCTCCAGGTAT+GGG | 0.343050 | 3.1:+61684972 | MS.gene98272:CDS |
| GGTGAGTTTGTGGATGAAAA+AGG | 0.348399 | 3.1:+61685656 | MS.gene98272:CDS |
| AAACTTTGAAGGTGAATATA+TGG | 0.351162 | 3.1:+61685679 | MS.gene98272:CDS |
| GGTTTAATGAAGAATGTTAA+AGG | 0.354466 | 3.1:+61685371 | MS.gene98272:CDS |
| TTTAGGTCTTGCTCCAGGTA+TGG | 0.357659 | 3.1:+61684971 | MS.gene98272:CDS |
| AGCTTATACCAAAATCTATT+AGG | 0.366341 | 3.1:+61685138 | MS.gene98272:CDS |
| GTCCTTCACTAGTGATGGTT+GGG | 0.368109 | 3.1:+61685897 | MS.gene98272:CDS |
| ATGAGAGAGGGTGGTAGGAC+AGG | 0.368223 | 3.1:+61685788 | MS.gene98272:CDS |
| TCTTTGTGACATTTGTGTCT+TGG | 0.380620 | 3.1:+61685414 | MS.gene98272:CDS |
| CCAAGCAAGCCCCAGTTTCT+GGG | 0.387318 | 3.1:-61685286 | None:intergenic |
| GGATTAACGGCTGTGATCAT+TGG | 0.387358 | 3.1:+61685809 | MS.gene98272:CDS |
| ATAGCAAATGGTATTGTTGC+TGG | 0.390897 | 3.1:+61686019 | MS.gene98272:CDS |
| TACAACAACTGCAACATTTG+TGG | 0.398363 | 3.1:+61685751 | MS.gene98272:CDS |
| TTTGCTATGGAATAAGTTAG+AGG | 0.398585 | 3.1:-61686004 | None:intergenic |
| GATGCAGCTGGTACTATTGT+AGG | 0.399262 | 3.1:+61685713 | MS.gene98272:CDS |
| CCAGAAACTGGGGCTTGCTT+GGG | 0.399883 | 3.1:+61685287 | MS.gene98272:CDS |
| TGTTGTCAAGTGTTCCTCCA+TGG | 0.400237 | 3.1:+61685867 | MS.gene98272:CDS |
| AATGGTATTGTTGCTGGTAT+TGG | 0.400571 | 3.1:+61686025 | MS.gene98272:CDS |
| AGGTTCCGCCTGAGCCGGTT+AGG | 0.405081 | 3.1:-61684785 | None:intergenic |
| GGCTGAGATTGGTGAGTTTG+TGG | 0.411324 | 3.1:+61685646 | MS.gene98272:CDS |
| AAAGCTCCAAGCCAGAACTT+TGG | 0.419444 | 3.1:-61685326 | None:intergenic |
| GCAAGCATCATAAATTGGTT+GGG | 0.419855 | 3.1:+61686082 | MS.gene98272:CDS |
| ATGGTTTCTTCTGTTGCAAT+GGG | 0.423017 | 3.1:+61684930 | MS.gene98272:CDS |
| GTTGTCAAGTGTTCCTCCAT+GGG | 0.424101 | 3.1:+61685868 | MS.gene98272:CDS |
| TTCAAGTTAACCAAGGTGTT+GGG | 0.433354 | 3.1:+61685207 | MS.gene98272:CDS |
| CAAGCTTCATATCCAGCATT+AGG | 0.435994 | 3.1:-61684858 | None:intergenic |
| GAGGAACACTTGACAACAAA+GGG | 0.436205 | 3.1:-61685862 | None:intergenic |
| CAACACCTTGGTTAACTTGA+AGG | 0.438439 | 3.1:-61685205 | None:intergenic |
| GGTTAGGATGGTTGCGTTGA+CGG | 0.441711 | 3.1:-61684769 | None:intergenic |
| CAAAGCCCAAAGTTCTGGCT+TGG | 0.453258 | 3.1:+61685320 | MS.gene98272:CDS |
| ATTAGGCTTGCATGTGCTGC+TGG | 0.458483 | 3.1:+61685155 | MS.gene98272:CDS |
| GACTGGTATAATGTATACTA+TGG | 0.460238 | 3.1:+61685625 | MS.gene98272:CDS |
| TAAGCATTGGGCCCCATACC+TGG | 0.463025 | 3.1:-61684984 | None:intergenic |
| TATGGTTTCTTCTGTTGCAA+TGG | 0.464732 | 3.1:+61684929 | MS.gene98272:CDS |
| TCTTTGTTGTAACTTGAAGT+AGG | 0.472333 | 3.1:-61684679 | None:intergenic |
| GTAACCAAATTAGCCGGATC+AGG | 0.472560 | 3.1:-61685239 | None:intergenic |
| TGCAACTTCTGTAACTGCTA+TGG | 0.474498 | 3.1:+61684911 | MS.gene98272:CDS |
| GGGTGGTAGGACAGGATTAA+CGG | 0.474590 | 3.1:+61685796 | MS.gene98272:CDS |
| AAGGGAAGTTTGGGAGGCAT+TGG | 0.475987 | 3.1:+61685571 | MS.gene98272:CDS |
| GTTAAAAGCTAAATAAGCAT+TGG | 0.476658 | 3.1:-61684997 | None:intergenic |
| GTGTCGGCCACTGCAACAAC+AGG | 0.478730 | 3.1:+61686142 | MS.gene98272:CDS |
| TTAAAAGCTAAATAAGCATT+GGG | 0.480173 | 3.1:-61684996 | None:intergenic |
| CTAACTTATTCCATAGCAAA+TGG | 0.481739 | 3.1:+61686007 | MS.gene98272:CDS |
| AATCTCATATCAAACTTCAA+TGG | 0.485501 | 3.1:+61685046 | MS.gene98272:CDS |
| CTGATACACCACTTGGTGAT+GGG | 0.491740 | 3.1:+61685465 | MS.gene98272:CDS |
| CTTCAAGTTAACCAAGGTGT+TGG | 0.492330 | 3.1:+61685206 | MS.gene98272:CDS |
| TGCAAGCATCATAAATTGGT+TGG | 0.492995 | 3.1:+61686081 | MS.gene98272:CDS |
| CCTGATACACCACTTGGTGA+TGG | 0.494415 | 3.1:+61685464 | MS.gene98272:CDS |
| GCAACCATCCTAACCGGCTC+AGG | 0.495398 | 3.1:+61684777 | MS.gene98272:CDS |
| ACATTTGTGGAATCATCAGC+TGG | 0.495434 | 3.1:+61685764 | MS.gene98272:CDS |
| CTTCCTTTAGGTCTTGCTCC+AGG | 0.495831 | 3.1:+61684966 | MS.gene98272:CDS |
| GGCTAATTTGGTTACGATGA+CGG | 0.502335 | 3.1:+61685247 | MS.gene98272:CDS |
| GGTCCTTCACTAGTGATGGT+TGG | 0.503897 | 3.1:+61685896 | MS.gene98272:CDS |
| CGAACAGTCTGCAACGGAGC+AGG | 0.504315 | 3.1:-61684805 | None:intergenic |
| TGGGCTTATTGGGCCTGATC+CGG | 0.513185 | 3.1:+61685226 | MS.gene98272:CDS |
| GGAGCAGGTTCCGCCTGAGC+CGG | 0.514286 | 3.1:-61684790 | None:intergenic |
| AGTGTTCCTCCATGGGCTAT+AGG | 0.514609 | 3.1:+61685875 | MS.gene98272:CDS |
| GTCAACGCAACCATCCTAAC+CGG | 0.515994 | 3.1:+61684771 | MS.gene98272:CDS |
| GCCGTTACAAACAGCTTCAT+AGG | 0.518154 | 3.1:+61684654 | MS.gene98272:CDS |
| GAAACTGGGGCTTGCTTGGG+TGG | 0.519213 | 3.1:+61685290 | MS.gene98272:CDS |
| CTTGTTGGTTATCATGGAAG+TGG | 0.521160 | 3.1:+61685020 | MS.gene98272:CDS |
| TCCGCCTGAGCCGGTTAGGA+TGG | 0.522218 | 3.1:-61684781 | None:intergenic |
| TAAATTGGTTGGGGAAAATG+AGG | 0.522940 | 3.1:+61686092 | MS.gene98272:CDS |
| TAAGATTGAATCAACTGCAT+GGG | 0.524569 | 3.1:+61685523 | MS.gene98272:CDS |
| TATAGGTCCTTCACTAGTGA+TGG | 0.527969 | 3.1:+61685892 | MS.gene98272:CDS |
| TTAGGCTTCAGTGTGCAATC+TGG | 0.529240 | 3.1:-61684840 | None:intergenic |
| ATACCTGGAGCAAGACCTAA+AGG | 0.530459 | 3.1:-61684969 | None:intergenic |
| AATATAGAAGTATGGGAGGA+GGG | 0.534212 | 3.1:+61684565 | None:intergenic |
| TGCACACTGAAGCCTAATGC+TGG | 0.535912 | 3.1:+61684846 | MS.gene98272:CDS |
| AGCAACAATACCATTTGCTA+TGG | 0.536834 | 3.1:-61686017 | None:intergenic |
| AAAATCATTATAGCAAAAGC+AGG | 0.540709 | 3.1:-61685977 | None:intergenic |
| TAATATAGAAGTATGGGAGG+AGG | 0.545354 | 3.1:+61684564 | None:intergenic |
| TAGGTCTTGCTCCAGGTATG+GGG | 0.545422 | 3.1:+61684973 | MS.gene98272:CDS |
| TAATAAAAGGGAAGTTTGGG+AGG | 0.550227 | 3.1:+61685565 | MS.gene98272:CDS |
| GCATATATTGTTGATGCAGC+TGG | 0.552779 | 3.1:+61685701 | MS.gene98272:CDS |
| GGTTGGGGAAAATGAGGAGA+AGG | 0.555614 | 3.1:+61686098 | MS.gene98272:CDS |
| GTTGATGTAATTGCTATGAC+TGG | 0.557035 | 3.1:+61685608 | MS.gene98272:CDS |
| GTAAGCCATGGTTAGAAAAG+TGG | 0.557631 | 3.1:-61684739 | None:intergenic |
| AACAACAGGTGTTGACTCAA+TGG | 0.559073 | 3.1:+61686156 | MS.gene98272:CDS |
| AAAGTATCGACCCAGAAACT+GGG | 0.559581 | 3.1:+61685276 | MS.gene98272:CDS |
| CAAGCATCATAAATTGGTTG+GGG | 0.560273 | 3.1:+61686083 | MS.gene98272:CDS |
| CTGGGATGAGAGAGGGTGGT+AGG | 0.562053 | 3.1:+61685783 | MS.gene98272:CDS |
| AAGTTGTGAAGGATATTGAT+TGG | 0.562846 | 3.1:+61685933 | MS.gene98272:CDS |
| ATGCAGCTGGTACTATTGTA+GGG | 0.565450 | 3.1:+61685714 | MS.gene98272:CDS |
| TTGTTGCAGTGGCCGACACT+TGG | 0.566804 | 3.1:-61686138 | None:intergenic |
| GACGGTTATGATGTAAGCCA+TGG | 0.571881 | 3.1:-61684751 | None:intergenic |
| ATAAGATTGAATCAACTGCA+TGG | 0.577206 | 3.1:+61685522 | MS.gene98272:CDS |
| ACCATCCTAACCGGCTCAGG+CGG | 0.579563 | 3.1:+61684780 | MS.gene98272:CDS |
| ATGTATACTATGGCTGAGAT+TGG | 0.581796 | 3.1:+61685635 | MS.gene98272:CDS |
| TCCTATGAAGCTGTTTGTAA+CGG | 0.584350 | 3.1:-61684655 | None:intergenic |
| GCCCAATAAGCCCAACACCT+TGG | 0.585757 | 3.1:-61685217 | None:intergenic |
| ACCCCAACCATCACTAGTGA+AGG | 0.592025 | 3.1:-61685899 | None:intergenic |
| AATGAGGAGAAGGATGATCA+AGG | 0.597156 | 3.1:+61686108 | MS.gene98272:CDS |
| TCCTTCACTAGTGATGGTTG+GGG | 0.600145 | 3.1:+61685898 | MS.gene98272:CDS |
| GTCATCGTAACCAAATTAGC+CGG | 0.603620 | 3.1:-61685245 | None:intergenic |
| AATGATGATGAAAGTTGTGA+AGG | 0.608328 | 3.1:+61685922 | MS.gene98272:CDS |
| GGTTAGAAAAGTGGCAGTTG+CGG | 0.614796 | 3.1:-61684730 | None:intergenic |
| ATCATCAGCTGGGATGAGAG+AGG | 0.620208 | 3.1:+61685775 | MS.gene98272:CDS |
| TCATCAGCTGGGATGAGAGA+GGG | 0.625775 | 3.1:+61685776 | MS.gene98272:CDS |
| AGTGAAGGACCTATAGCCCA+TGG | 0.627407 | 3.1:-61685884 | None:intergenic |
| GTGCAATCTGGTGTTGCAGT+AGG | 0.631629 | 3.1:-61684828 | None:intergenic |
| GTCAACACCTGTTGTTGCAG+TGG | 0.633263 | 3.1:-61686149 | None:intergenic |
| ATGGGAGGAGGGAAAGCATG+TGG | 0.635626 | 3.1:+61684576 | MS.gene98272:CDS |
| GGAGGAACACTTGACAACAA+AGG | 0.635885 | 3.1:-61685863 | None:intergenic |
| GTGGGCCTTCAAGTTAACCA+AGG | 0.637659 | 3.1:+61685200 | MS.gene98272:CDS |
| CACTTCCATGATAACCAACA+AGG | 0.638963 | 3.1:-61685019 | None:intergenic |
| CTGGAGCAAGACCTAAAGGA+AGG | 0.643586 | 3.1:-61684965 | None:intergenic |
| CTAAAATTCCCATCACCAAG+TGG | 0.643825 | 3.1:-61685473 | None:intergenic |
| CAAGGAGCATAACCAAGTGT+CGG | 0.645951 | 3.1:+61686126 | MS.gene98272:CDS |
| CATTTGTGGAATCATCAGCT+GGG | 0.649553 | 3.1:+61685765 | MS.gene98272:CDS |
| AACAGGTGTTGACTCAATGG+TGG | 0.650221 | 3.1:+61686159 | MS.gene98272:CDS |
| AATTAATATAGAAGTATGGG+AGG | 0.654250 | 3.1:+61684561 | None:intergenic |
| AGTAGGCGAACAGTCTGCAA+CGG | 0.671171 | 3.1:-61684811 | None:intergenic |
| AAGTATCGACCCAGAAACTG+GGG | 0.678648 | 3.1:+61685277 | MS.gene98272:CDS |
| TCAGCTGGGATGAGAGAGGG+TGG | 0.679695 | 3.1:+61685779 | MS.gene98272:CDS |
| GTCTTGGTTTAGACACACTG+AGG | 0.729855 | 3.1:+61685430 | MS.gene98272:CDS |
| GAAGGACCTATAGCCCATGG+AGG | 0.763046 | 3.1:-61685881 | None:intergenic |
| AGGAACACTTGACAACAAAG+GGG | 0.764521 | 3.1:-61685861 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAGCTAAATAAGCATT+GGG | - | chr3.1:61684999-61685018 | None:intergenic | 20.0% |
| !!! | ACTTTGGTGATTTTAATAAA+AGG | + | chr3.1:61685552-61685571 | MS.gene98272:CDS | 20.0% |
| !!! | ATTTTAATAAAAGGGAAGTT+TGG | + | chr3.1:61685561-61685580 | MS.gene98272:CDS | 20.0% |
| !!! | CTTTGGTGATTTTAATAAAA+GGG | + | chr3.1:61685553-61685572 | MS.gene98272:CDS | 20.0% |
| !!! | TTTTAATAAAAGGGAAGTTT+GGG | + | chr3.1:61685562-61685581 | MS.gene98272:CDS | 20.0% |
| ! | AAAATCATTATAGCAAAAGC+AGG | - | chr3.1:61685980-61685999 | None:intergenic | 25.0% |
| ! | AATCTCATATCAAACTTCAA+TGG | + | chr3.1:61685046-61685065 | MS.gene98272:CDS | 25.0% |
| ! | AGCTTATACCAAAATCTATT+AGG | + | chr3.1:61685138-61685157 | MS.gene98272:CDS | 25.0% |
| ! | GGTTTAATGAAGAATGTTAA+AGG | + | chr3.1:61685371-61685390 | MS.gene98272:CDS | 25.0% |
| ! | GTTAAAAGCTAAATAAGCAT+TGG | - | chr3.1:61685000-61685019 | None:intergenic | 25.0% |
| ! | GTTAAAGGTAGTATGATTTA+TGG | + | chr3.1:61685386-61685405 | MS.gene98272:CDS | 25.0% |
| !! | AAACTTTGAAGGTGAATATA+TGG | + | chr3.1:61685679-61685698 | MS.gene98272:CDS | 25.0% |
| !!! | TATTTAGCTTTTAACCTTGT+TGG | + | chr3.1:61685005-61685024 | MS.gene98272:CDS | 25.0% |
| AAAAAACACATGGACTCAAA+TGG | + | chr3.1:61684614-61684633 | MS.gene98272:CDS | 30.0% | |
| AAGTTGTGAAGGATATTGAT+TGG | + | chr3.1:61685933-61685952 | MS.gene98272:CDS | 30.0% | |
| AGCCAAAACAAAAAATGACT+TGG | + | chr3.1:61684884-61684903 | MS.gene98272:CDS | 30.0% | |
| ATAAGATTGAATCAACTGCA+TGG | + | chr3.1:61685522-61685541 | MS.gene98272:CDS | 30.0% | |
| CTAACTTATTCCATAGCAAA+TGG | + | chr3.1:61686007-61686026 | MS.gene98272:CDS | 30.0% | |
| GACTGGTATAATGTATACTA+TGG | + | chr3.1:61685625-61685644 | MS.gene98272:CDS | 30.0% | |
| GATGAAAAAGGAAACTTTGA+AGG | + | chr3.1:61685668-61685687 | MS.gene98272:CDS | 30.0% | |
| TAAGATTGAATCAACTGCAT+GGG | + | chr3.1:61685523-61685542 | MS.gene98272:CDS | 30.0% | |
| TTTCAAGGCTAAAAAACACA+TGG | + | chr3.1:61684604-61684623 | MS.gene98272:CDS | 30.0% | |
| ! | AACTTCAATGGCTATTGTTT+TGG | + | chr3.1:61685058-61685077 | MS.gene98272:CDS | 30.0% |
| ! | AATGATGATGAAAGTTGTGA+AGG | + | chr3.1:61685922-61685941 | MS.gene98272:CDS | 30.0% |
| ! | CAAAACAAAAAATGACTTGG+TGG | + | chr3.1:61684887-61684906 | MS.gene98272:CDS | 30.0% |
| ! | TCTTTGTTGTAACTTGAAGT+AGG | - | chr3.1:61684682-61684701 | None:intergenic | 30.0% |
| ! | TTTAACCTTGTTGGTTATCA+TGG | + | chr3.1:61685014-61685033 | MS.gene98272:CDS | 30.0% |
| ! | TTTGCTATGGAATAAGTTAG+AGG | - | chr3.1:61686007-61686026 | None:intergenic | 30.0% |
| !!! | CACCAAGTCATTTTTTGTTT+TGG | - | chr3.1:61684889-61684908 | None:intergenic | 30.0% |
| !!! | TTTCTTTTAGCTTCTGCTTT+TGG | + | chr3.1:61685095-61685114 | MS.gene98272:CDS | 30.0% |
| !!! | TTTTTAGCTAACCTTCCTTT+AGG | + | chr3.1:61684954-61684973 | MS.gene98272:CDS | 30.0% |
| AATGGTATTGTTGCTGGTAT+TGG | + | chr3.1:61686025-61686044 | MS.gene98272:CDS | 35.0% | |
| ATAGCAAATGGTATTGTTGC+TGG | + | chr3.1:61686019-61686038 | MS.gene98272:CDS | 35.0% | |
| ATGCTGCAAGCATCATAAAT+TGG | + | chr3.1:61686077-61686096 | MS.gene98272:CDS | 35.0% | |
| ATGGTTTCTTCTGTTGCAAT+GGG | + | chr3.1:61684930-61684949 | MS.gene98272:CDS | 35.0% | |
| ATGTATACTATGGCTGAGAT+TGG | + | chr3.1:61685635-61685654 | MS.gene98272:CDS | 35.0% | |
| CAAGCATCATAAATTGGTTG+GGG | + | chr3.1:61686083-61686102 | MS.gene98272:CDS | 35.0% | |
| GCAAGCATCATAAATTGGTT+GGG | + | chr3.1:61686082-61686101 | MS.gene98272:CDS | 35.0% | |
| GTTGATGTAATTGCTATGAC+TGG | + | chr3.1:61685608-61685627 | MS.gene98272:CDS | 35.0% | |
| TAAATTGGTTGGGGAAAATG+AGG | + | chr3.1:61686092-61686111 | MS.gene98272:CDS | 35.0% | |
| TAATAAAAGGGAAGTTTGGG+AGG | + | chr3.1:61685565-61685584 | MS.gene98272:CDS | 35.0% | |
| TACAACAACTGCAACATTTG+TGG | + | chr3.1:61685751-61685770 | MS.gene98272:CDS | 35.0% | |
| TATGGTTTCTTCTGTTGCAA+TGG | + | chr3.1:61684929-61684948 | MS.gene98272:CDS | 35.0% | |
| TCCTATGAAGCTGTTTGTAA+CGG | - | chr3.1:61684658-61684677 | None:intergenic | 35.0% | |
| TCTTTGTGACATTTGTGTCT+TGG | + | chr3.1:61685414-61685433 | MS.gene98272:CDS | 35.0% | |
| TGCAAGCATCATAAATTGGT+TGG | + | chr3.1:61686081-61686100 | MS.gene98272:CDS | 35.0% | |
| ! | AAGCATGTGGTGTATTTTCA+AGG | + | chr3.1:61684589-61684608 | MS.gene98272:CDS | 35.0% |
| ! | AGCAACAATACCATTTGCTA+TGG | - | chr3.1:61686020-61686039 | None:intergenic | 35.0% |
| ! | CATGCAAGCCTAATAGATTT+TGG | - | chr3.1:61685149-61685168 | None:intergenic | 35.0% |
| ! | GGTTTTCTTATCACAAGCTA+CGG | + | chr3.1:61685350-61685369 | MS.gene98272:CDS | 35.0% |
| ! | TATTTTCCTGATACACCACT+TGG | + | chr3.1:61685458-61685477 | MS.gene98272:CDS | 35.0% |
| ! | TTCAAGTTAACCAAGGTGTT+GGG | + | chr3.1:61685207-61685226 | MS.gene98272:CDS | 35.0% |
| !! | GGGCTTTTTATTGCTTTTGT+GGG | + | chr3.1:61685182-61685201 | MS.gene98272:CDS | 35.0% |
| !! | TGGGCTTTTTATTGCTTTTG+TGG | + | chr3.1:61685181-61685200 | MS.gene98272:CDS | 35.0% |
| !!! | ACTGCATGGGTTTTTAACTT+TGG | + | chr3.1:61685536-61685555 | MS.gene98272:CDS | 35.0% |
| !!! | ATGGCTATTGTTTTGGTTGA+AGG | + | chr3.1:61685065-61685084 | MS.gene98272:CDS | 35.0% |
| AATGAGGAGAAGGATGATCA+AGG | + | chr3.1:61686108-61686127 | MS.gene98272:CDS | 40.0% | |
| ACATTTGTGGAATCATCAGC+TGG | + | chr3.1:61685764-61685783 | MS.gene98272:CDS | 40.0% | |
| ACTATTGTAGGGTCAGCTTT+AGG | + | chr3.1:61685725-61685744 | MS.gene98272:CDS | 40.0% | |
| AGGAACACTTGACAACAAAG+GGG | - | chr3.1:61685864-61685883 | None:intergenic | 40.0% | |
| ATGCAGCTGGTACTATTGTA+GGG | + | chr3.1:61685714-61685733 | MS.gene98272:CDS | 40.0% | |
| CAAGCTTCATATCCAGCATT+AGG | - | chr3.1:61684861-61684880 | None:intergenic | 40.0% | |
| CACTTCCATGATAACCAACA+AGG | - | chr3.1:61685022-61685041 | None:intergenic | 40.0% | |
| CATTTGTGGAATCATCAGCT+GGG | + | chr3.1:61685765-61685784 | MS.gene98272:CDS | 40.0% | |
| CTAAAATTCCCATCACCAAG+TGG | - | chr3.1:61685476-61685495 | None:intergenic | 40.0% | |
| GAGGAACACTTGACAACAAA+GGG | - | chr3.1:61685865-61685884 | None:intergenic | 40.0% | |
| GCATATATTGTTGATGCAGC+TGG | + | chr3.1:61685701-61685720 | MS.gene98272:CDS | 40.0% | |
| GGCTAATTTGGTTACGATGA+CGG | + | chr3.1:61685247-61685266 | MS.gene98272:CDS | 40.0% | |
| GGTGAGTTTGTGGATGAAAA+AGG | + | chr3.1:61685656-61685675 | MS.gene98272:CDS | 40.0% | |
| GTAAGCCATGGTTAGAAAAG+TGG | - | chr3.1:61684742-61684761 | None:intergenic | 40.0% | |
| GTCATCGTAACCAAATTAGC+CGG | - | chr3.1:61685248-61685267 | None:intergenic | 40.0% | |
| GTTTGTAACGGCGTTGTTTA+TGG | - | chr3.1:61684646-61684665 | None:intergenic | 40.0% | |
| TATAGGTCCTTCACTAGTGA+TGG | + | chr3.1:61685892-61685911 | MS.gene98272:CDS | 40.0% | |
| TGCAACTTCTGTAACTGCTA+TGG | + | chr3.1:61684911-61684930 | MS.gene98272:CDS | 40.0% | |
| ! | CAACACCTTGGTTAACTTGA+AGG | - | chr3.1:61685208-61685227 | None:intergenic | 40.0% |
| ! | CTTCAAGTTAACCAAGGTGT+TGG | + | chr3.1:61685206-61685225 | MS.gene98272:CDS | 40.0% |
| ! | CTTGTTGGTTATCATGGAAG+TGG | + | chr3.1:61685020-61685039 | MS.gene98272:CDS | 40.0% |
| ! | TTCTGGGTCGATACTTTTAC+AGG | - | chr3.1:61685273-61685292 | None:intergenic | 40.0% |
| !! | AAAAGTATCGACCCAGAAAC+TGG | + | chr3.1:61685275-61685294 | MS.gene98272:CDS | 40.0% |
| !! | AAAGTATCGACCCAGAAACT+GGG | + | chr3.1:61685276-61685295 | MS.gene98272:CDS | 40.0% |
| !! | AACAACAGGTGTTGACTCAA+TGG | + | chr3.1:61686156-61686175 | MS.gene98272:CDS | 40.0% |
| !!! | AACTGCCACTTTTCTAACCA+TGG | + | chr3.1:61684734-61684753 | MS.gene98272:CDS | 40.0% |
| !!! | GCTTCTGCTTTTGGTTTAAG+AGG | + | chr3.1:61685104-61685123 | MS.gene98272:CDS | 40.0% |
| AAAGCTCCAAGCCAGAACTT+TGG | - | chr3.1:61685329-61685348 | None:intergenic | 45.0% | |
| AAGCTCCAAGCCAGAACTTT+GGG | - | chr3.1:61685328-61685347 | None:intergenic | 45.0% | |
| AGTTGCAAAGCCCAAAGTTC+TGG | + | chr3.1:61685315-61685334 | MS.gene98272:CDS | 45.0% | |
| ATACCTGGAGCAAGACCTAA+AGG | - | chr3.1:61684972-61684991 | None:intergenic | 45.0% | |
| GACGGTTATGATGTAAGCCA+TGG | - | chr3.1:61684754-61684773 | None:intergenic | 45.0% | |
| GATGCAGCTGGTACTATTGT+AGG | + | chr3.1:61685713-61685732 | MS.gene98272:CDS | 45.0% | |
| GCCGTTACAAACAGCTTCAT+AGG | + | chr3.1:61684654-61684673 | MS.gene98272:CDS | 45.0% | |
| GGAGGAACACTTGACAACAA+AGG | - | chr3.1:61685866-61685885 | None:intergenic | 45.0% | |
| GGATTAACGGCTGTGATCAT+TGG | + | chr3.1:61685809-61685828 | MS.gene98272:CDS | 45.0% | |
| GGTTAGAAAAGTGGCAGTTG+CGG | - | chr3.1:61684733-61684752 | None:intergenic | 45.0% | |
| GTAACCAAATTAGCCGGATC+AGG | - | chr3.1:61685242-61685261 | None:intergenic | 45.0% | |
| GTCCTTCACTAGTGATGGTT+GGG | + | chr3.1:61685897-61685916 | MS.gene98272:CDS | 45.0% | |
| GTCTTGGTTTAGACACACTG+AGG | + | chr3.1:61685430-61685449 | MS.gene98272:CDS | 45.0% | |
| GTTGTCAAGTGTTCCTCCAT+GGG | + | chr3.1:61685868-61685887 | MS.gene98272:CDS | 45.0% | |
| TCCTTCACTAGTGATGGTTG+GGG | + | chr3.1:61685898-61685917 | MS.gene98272:CDS | 45.0% | |
| TGTTGTCAAGTGTTCCTCCA+TGG | + | chr3.1:61685867-61685886 | MS.gene98272:CDS | 45.0% | |
| TTAGGCTTCAGTGTGCAATC+TGG | - | chr3.1:61684843-61684862 | None:intergenic | 45.0% | |
| TTAGGTCTTGCTCCAGGTAT+GGG | + | chr3.1:61684972-61684991 | MS.gene98272:CDS | 45.0% | |
| TTTAGGTCTTGCTCCAGGTA+TGG | + | chr3.1:61684971-61684990 | MS.gene98272:CDS | 45.0% | |
| ! | CAAGGAGCATAACCAAGTGT+CGG | + | chr3.1:61686126-61686145 | MS.gene98272:CDS | 45.0% |
| ! | CTGATACACCACTTGGTGAT+GGG | + | chr3.1:61685465-61685484 | MS.gene98272:CDS | 45.0% |
| ! | TTGCATGTGCTGCTGGTATT+GGG | + | chr3.1:61685162-61685181 | MS.gene98272:CDS | 45.0% |
| !! | AACAGGTGTTGACTCAATGG+TGG | + | chr3.1:61686159-61686178 | MS.gene98272:CDS | 45.0% |
| !! | AACCAAGGTGTTGGGCTTAT+TGG | + | chr3.1:61685215-61685234 | MS.gene98272:CDS | 45.0% |
| !! | AAGTATCGACCCAGAAACTG+GGG | + | chr3.1:61685277-61685296 | MS.gene98272:CDS | 45.0% |
| !! | ACCAAGGTGTTGGGCTTATT+GGG | + | chr3.1:61685216-61685235 | MS.gene98272:CDS | 45.0% |
| !!! | AAGTTCTGGCTTGGAGCTTT+TGG | + | chr3.1:61685329-61685348 | MS.gene98272:CDS | 45.0% |
| ACCCCAACCATCACTAGTGA+AGG | - | chr3.1:61685902-61685921 | None:intergenic | 50.0% | |
| AGTAGGCGAACAGTCTGCAA+CGG | - | chr3.1:61684814-61684833 | None:intergenic | 50.0% | |
| AGTGAAGGACCTATAGCCCA+TGG | - | chr3.1:61685887-61685906 | None:intergenic | 50.0% | |
| ATCATCAGCTGGGATGAGAG+AGG | + | chr3.1:61685775-61685794 | MS.gene98272:CDS | 50.0% | |
| ATTAGGCTTGCATGTGCTGC+TGG | + | chr3.1:61685155-61685174 | MS.gene98272:CDS | 50.0% | |
| CCATCACCAAGTGGTGTATC+AGG | - | chr3.1:61685467-61685486 | None:intergenic | 50.0% | |
| CTGGAGCAAGACCTAAAGGA+AGG | - | chr3.1:61684968-61684987 | None:intergenic | 50.0% | |
| CTTCCTTTAGGTCTTGCTCC+AGG | + | chr3.1:61684966-61684985 | MS.gene98272:CDS | 50.0% | |
| GGCTGAGATTGGTGAGTTTG+TGG | + | chr3.1:61685646-61685665 | MS.gene98272:CDS | 50.0% | |
| GGGTGGTAGGACAGGATTAA+CGG | + | chr3.1:61685796-61685815 | MS.gene98272:CDS | 50.0% | |
| GGTCCTTCACTAGTGATGGT+TGG | + | chr3.1:61685896-61685915 | MS.gene98272:CDS | 50.0% | |
| GGTTAGGATGGTTGCGTTGA+CGG | - | chr3.1:61684772-61684791 | None:intergenic | 50.0% | |
| GGTTGGGGAAAATGAGGAGA+AGG | + | chr3.1:61686098-61686117 | MS.gene98272:CDS | 50.0% | |
| GTCAACACCTGTTGTTGCAG+TGG | - | chr3.1:61686152-61686171 | None:intergenic | 50.0% | |
| GTCAACGCAACCATCCTAAC+CGG | + | chr3.1:61684771-61684790 | MS.gene98272:CDS | 50.0% | |
| TAGGTCTTGCTCCAGGTATG+GGG | + | chr3.1:61684973-61684992 | MS.gene98272:CDS | 50.0% | |
| TCATCAGCTGGGATGAGAGA+GGG | + | chr3.1:61685776-61685795 | MS.gene98272:CDS | 50.0% | |
| TGCACACTGAAGCCTAATGC+TGG | + | chr3.1:61684846-61684865 | MS.gene98272:CDS | 50.0% | |
| ! | AAGGGAAGTTTGGGAGGCAT+TGG | + | chr3.1:61685571-61685590 | MS.gene98272:CDS | 50.0% |
| ! | AGTGTTCCTCCATGGGCTAT+AGG | + | chr3.1:61685875-61685894 | MS.gene98272:CDS | 50.0% |
| ! | CAAAGCCCAAAGTTCTGGCT+TGG | + | chr3.1:61685320-61685339 | MS.gene98272:CDS | 50.0% |
| ! | CCTGATACACCACTTGGTGA+TGG | + | chr3.1:61685464-61685483 | MS.gene98272:CDS | 50.0% |
| ! | CTTGCATGTGCTGCTGGTAT+TGG | + | chr3.1:61685161-61685180 | MS.gene98272:CDS | 50.0% |
| ! | GTGGGCCTTCAAGTTAACCA+AGG | + | chr3.1:61685200-61685219 | MS.gene98272:CDS | 50.0% |
| !! | GTGCAATCTGGTGTTGCAGT+AGG | - | chr3.1:61684831-61684850 | None:intergenic | 50.0% |
| ATGAGAGAGGGTGGTAGGAC+AGG | + | chr3.1:61685788-61685807 | MS.gene98272:CDS | 55.0% | |
| CCAAGCAAGCCCCAGTTTCT+GGG | - | chr3.1:61685289-61685308 | None:intergenic | 55.0% | |
| GAAGGACCTATAGCCCATGG+AGG | - | chr3.1:61685884-61685903 | None:intergenic | 55.0% | |
| GCCCAATAAGCCCAACACCT+TGG | - | chr3.1:61685220-61685239 | None:intergenic | 55.0% | |
| TGGGCCTGATCCGGCTAATT+TGG | + | chr3.1:61685235-61685254 | MS.gene98272:CDS | 55.0% | |
| TGGGCTTATTGGGCCTGATC+CGG | + | chr3.1:61685226-61685245 | MS.gene98272:CDS | 55.0% | |
| TTGTTGCAGTGGCCGACACT+TGG | - | chr3.1:61686141-61686160 | None:intergenic | 55.0% | |
| ! | ATGGGAGGAGGGAAAGCATG+TGG | + | chr3.1:61684576-61684595 | MS.gene98272:CDS | 55.0% |
| ! | CCAGAAACTGGGGCTTGCTT+GGG | + | chr3.1:61685287-61685306 | MS.gene98272:CDS | 55.0% |
| !! | TAAGCATTGGGCCCCATACC+TGG | - | chr3.1:61684987-61685006 | None:intergenic | 55.0% |
| CCCAAGCAAGCCCCAGTTTC+TGG | - | chr3.1:61685290-61685309 | None:intergenic | 60.0% | |
| CGAACAGTCTGCAACGGAGC+AGG | - | chr3.1:61684808-61684827 | None:intergenic | 60.0% | |
| CTGGGATGAGAGAGGGTGGT+AGG | + | chr3.1:61685783-61685802 | MS.gene98272:CDS | 60.0% | |
| TCAGCTGGGATGAGAGAGGG+TGG | + | chr3.1:61685779-61685798 | MS.gene98272:CDS | 60.0% | |
| ! | ACCATCCTAACCGGCTCAGG+CGG | + | chr3.1:61684780-61684799 | MS.gene98272:CDS | 60.0% |
| ! | CCCAGAAACTGGGGCTTGCT+TGG | + | chr3.1:61685286-61685305 | MS.gene98272:CDS | 60.0% |
| ! | GAAACTGGGGCTTGCTTGGG+TGG | + | chr3.1:61685290-61685309 | MS.gene98272:CDS | 60.0% |
| ! | GCAACCATCCTAACCGGCTC+AGG | + | chr3.1:61684777-61684796 | MS.gene98272:CDS | 60.0% |
| ! | GTGTCGGCCACTGCAACAAC+AGG | + | chr3.1:61686142-61686161 | MS.gene98272:CDS | 60.0% |
| AGGTTCCGCCTGAGCCGGTT+AGG | - | chr3.1:61684788-61684807 | None:intergenic | 65.0% | |
| TCCGCCTGAGCCGGTTAGGA+TGG | - | chr3.1:61684784-61684803 | None:intergenic | 65.0% | |
| GGAGCAGGTTCCGCCTGAGC+CGG | - | chr3.1:61684793-61684812 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 61684576 | 61686192 | 61684576 | ID=MS.gene98272 |
| chr3.1 | mRNA | 61684576 | 61686192 | 61684576 | ID=MS.gene98272.t1;Parent=MS.gene98272 |
| chr3.1 | exon | 61684576 | 61686192 | 61684576 | ID=MS.gene98272.t1.exon1;Parent=MS.gene98272.t1 |
| chr3.1 | CDS | 61684576 | 61686192 | 61684576 | ID=cds.MS.gene98272.t1;Parent=MS.gene98272.t1 |
| Gene Sequence |
| Protein sequence |
