AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene014002

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014002.t1 MTR_7g089800 99.558 453 1 1 1 453 1 452 0.0 921
MS.gene014002.t1 MTR_7g089800 99.764 423 1 0 31 453 1 423 0.0 863
MS.gene014002.t1 MTR_8g040120 67.660 470 131 9 1 453 1 466 0.0 580
MS.gene014002.t1 MTR_5g054900 52.596 443 171 10 40 453 2 434 4.34e-144 419
MS.gene014002.t1 MTR_5g054900 51.663 451 175 11 32 453 24 460 4.58e-140 409
MS.gene014002.t1 MTR_5g054900 59.312 349 113 4 124 453 15 353 6.50e-140 405
MS.gene014002.t1 MTR_5g054900 58.739 349 111 5 124 453 15 349 6.43e-136 395
MS.gene014002.t1 MTR_7g092750 58.232 328 124 5 135 453 39 362 9.31e-130 380
MS.gene014002.t1 MTR_7g092750 58.232 328 124 5 135 453 140 463 2.61e-128 380
MS.gene014002.t1 MTR_1g111310 62.739 314 101 4 145 453 405 707 3.20e-127 385
MS.gene014002.t1 MTR_1g111310 61.716 303 102 3 145 447 38 326 1.41e-114 352
MS.gene014002.t1 MTR_2g086420 61.458 288 101 2 166 453 191 468 9.66e-122 364
MS.gene014002.t1 MTR_2g086420 61.458 288 101 2 166 453 192 469 1.09e-121 364
MS.gene014002.t1 MTR_3g087940 59.000 300 110 3 159 453 70 361 8.38e-114 339
MS.gene014002.t1 MTR_4g053250 49.025 359 160 5 102 453 119 461 2.23e-110 335
MS.gene014002.t1 MTR_7g092750 52.439 328 117 6 135 453 140 437 3.73e-107 325
MS.gene014002.t1 MTR_0126s0080 61.154 260 85 6 157 405 204 458 1.89e-101 311
MS.gene014002.t1 MTR_8g091650 51.351 296 130 4 163 453 70 356 1.37e-93 287
MS.gene014002.t1 MTR_8g091650 52.083 288 124 4 171 453 5 283 1.93e-93 284
MS.gene014002.t1 MTR_3g073560 47.353 340 156 5 128 451 13 345 3.70e-93 293
MS.gene014002.t1 MTR_8g091650 51.890 291 126 4 168 453 111 392 1.59e-92 285
MS.gene014002.t1 MTR_5g060950 51.568 287 128 3 168 450 67 346 3.41e-91 281
MS.gene014002.t1 MTR_3g044820 59.358 187 58 4 145 320 29 208 2.61e-72 227
MS.gene014002.t1 MTR_1g111320 36.571 175 92 4 59 231 54 211 1.05e-23 99.4
MS.gene014002.t1 MTR_1g090370 32.367 207 110 5 245 446 47 228 4.36e-21 92.0
MS.gene014002.t1 MTR_8g094690 27.126 247 140 5 229 441 8 248 2.21e-16 79.3
MS.gene014002.t1 MTR_2g076140 22.535 213 124 3 240 432 8 199 9.24e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014002.t1 AT3G12250 73.414 331 77 4 133 453 1 330 1.56e-168 477
MS.gene014002.t1 AT3G12250 73.414 331 77 4 133 453 1 330 1.56e-168 477
MS.gene014002.t1 AT3G12250 73.414 331 77 4 133 453 1 330 1.56e-168 477
MS.gene014002.t1 AT3G12250 73.414 331 77 4 133 453 1 330 1.56e-168 477
MS.gene014002.t1 AT5G06950 78.523 298 63 1 156 453 34 330 9.38e-167 472
MS.gene014002.t1 AT5G06950 78.523 298 63 1 156 453 34 330 9.38e-167 472
MS.gene014002.t1 AT5G06950 78.523 298 63 1 156 453 34 330 9.38e-167 472
MS.gene014002.t1 AT5G06950 78.523 298 63 1 156 453 34 330 9.38e-167 472
MS.gene014002.t1 AT5G06950 78.523 298 63 1 156 453 34 330 9.38e-167 472
MS.gene014002.t1 AT3G12250 77.852 298 65 1 156 453 7 303 1.54e-166 471
MS.gene014002.t1 AT3G12250 77.852 298 65 1 156 453 28 324 4.07e-166 471
MS.gene014002.t1 AT3G12250 77.852 298 65 1 156 453 59 355 6.55e-165 469
MS.gene014002.t1 AT5G06960 73.292 322 77 3 140 453 10 330 5.75e-155 442
MS.gene014002.t1 AT5G06960 73.292 322 77 3 140 453 10 330 5.75e-155 442
MS.gene014002.t1 AT5G06960 77.083 288 65 1 166 453 24 310 6.91e-155 441
MS.gene014002.t1 AT1G68640 70.103 291 84 2 165 453 163 452 7.11e-138 404
MS.gene014002.t1 AT1G08320 58.104 327 124 4 130 453 13 329 7.52e-128 375
MS.gene014002.t1 AT1G08320 58.104 327 124 4 130 453 13 329 7.52e-128 375
MS.gene014002.t1 AT1G08320 58.104 327 124 4 130 453 137 453 2.60e-126 375
MS.gene014002.t1 AT1G08320 58.104 327 124 4 130 453 137 453 2.60e-126 375
MS.gene014002.t1 AT1G08320 58.104 327 124 4 130 453 137 453 2.60e-126 375
MS.gene014002.t1 AT5G06839 56.954 302 117 3 165 453 115 416 4.01e-117 349
MS.gene014002.t1 AT5G06839 57.143 301 117 3 165 453 115 415 1.83e-116 348
MS.gene014002.t1 AT5G06839 57.143 301 117 3 165 453 158 458 1.92e-116 349
MS.gene014002.t1 AT5G10030 54.688 320 132 4 139 453 51 362 2.43e-113 338
MS.gene014002.t1 AT5G10030 54.688 320 132 4 139 453 51 362 2.43e-113 338
MS.gene014002.t1 AT5G10030 54.688 320 132 4 139 453 51 362 2.43e-113 338
MS.gene014002.t1 AT5G10030 54.688 320 132 4 139 453 51 362 2.43e-113 338
MS.gene014002.t1 AT5G10030 54.688 320 132 4 139 453 51 362 2.43e-113 338
MS.gene014002.t1 AT1G22070 56.393 305 124 3 153 453 83 382 4.23e-112 335
MS.gene014002.t1 AT5G65210 50.716 349 141 5 128 453 26 366 2.83e-109 328
MS.gene014002.t1 AT5G65210 50.716 349 141 5 128 453 26 366 2.83e-109 328
MS.gene014002.t1 AT5G65210 50.716 349 141 5 128 453 26 366 2.83e-109 328
MS.gene014002.t1 AT5G65210 50.716 349 141 5 128 453 26 366 2.83e-109 328
MS.gene014002.t1 AT5G65210 50.716 349 141 5 128 453 26 366 2.83e-109 328
MS.gene014002.t1 AT5G65210 50.716 349 141 5 128 453 26 366 2.83e-109 328
MS.gene014002.t1 AT5G65210 55.667 300 120 3 159 453 5 296 3.44e-109 325
MS.gene014002.t1 AT1G77920 49.046 367 155 6 89 453 30 366 5.06e-108 324
MS.gene014002.t1 AT1G58330 26.244 221 145 5 235 443 9 223 6.89e-15 74.3
MS.gene014002.t1 AT3G14880 24.675 231 131 5 228 432 1 214 2.15e-14 73.2
MS.gene014002.t1 AT3G14880 23.651 241 134 5 228 435 1 224 2.71e-13 70.1

Find 118 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCTCGAATTTCTGATTT+TGG 0.114816 7.2:+18785881 MS.gene014002:CDS
ATCAACTGTTGTTCAGTTAA+AGG 0.191657 7.2:-18788450 None:intergenic
AAAAGACGCGCTGCCAAATT+TGG 0.207656 7.2:+18786694 MS.gene014002:CDS
CCAGATGTTGAAGCCAAATT+TGG 0.211263 7.2:-18786707 None:intergenic
AGCCATTTGTCCCATGTAAT+TGG 0.245079 7.2:-18788610 None:intergenic
CCAAATTTGGCTTCAACATC+TGG 0.245789 7.2:+18786707 MS.gene014002:CDS
CCCAACCCATCAGGTGCTTC+TGG 0.270597 7.2:+18788579 MS.gene014002:CDS
TTAGGTGCTGATATTCAATT+TGG 0.276431 7.2:+18786500 MS.gene014002:CDS
AACCTCTCTGCTGCAATTGC+TGG 0.307118 7.2:+18786650 MS.gene014002:CDS
GCTGTAGCTCTTGCTCTAGT+TGG 0.316242 7.2:-18787264 None:intergenic
GCAGCTTCTTGTAAGTCATT+TGG 0.321728 7.2:+18788425 MS.gene014002:intron
GATGGTTAGAAGAGCATAAT+AGG 0.327313 7.2:+18788043 MS.gene014002:CDS
CTGGCGGCCATCGTGAGAAT+TGG 0.336333 7.2:+18786726 MS.gene014002:CDS
TATTGCAGCCCTTAGTTCAT+TGG 0.346864 7.2:-18788070 None:intergenic
TCATGTGGATTGGAGGCTTT+CGG 0.349268 7.2:+18788244 MS.gene014002:CDS
TGGCGGCCATCGTGAGAATT+GGG 0.354181 7.2:+18786727 MS.gene014002:CDS
GGAATATTTATTTCAAGTAC+TGG 0.364580 7.2:+18787420 MS.gene014002:CDS
GAAAAGCCGACTGAGGAAAA+AGG 0.365804 7.2:+18787100 MS.gene014002:CDS
CATACTTCTGCTAAGATTCA+TGG 0.370102 7.2:-18785942 None:intergenic
TACCATTTCCACTCATTGAA+TGG 0.377090 7.2:-18787452 None:intergenic
TCGGTCATCTGAACTTCTTA+AGG 0.384806 7.2:+18788263 MS.gene014002:CDS
TTTAACTGAACAACAGTTGA+TGG 0.387147 7.2:+18788452 MS.gene014002:CDS
ATTTACATGGAATTATTAGA+TGG 0.388302 7.2:-18785037 None:intergenic
TCAATTTGGTGCTTTAAGTA+AGG 0.395237 7.2:+18786514 MS.gene014002:CDS
CTTTCCGAGACATTGGCTAA+TGG 0.402534 7.2:+18788552 MS.gene014002:CDS
CTCAAAATCGTGAAGCTGCC+AGG 0.414559 7.2:+18787078 MS.gene014002:CDS
AAAGCAAATAGCCAAGCTTT+AGG 0.415265 7.2:+18786482 MS.gene014002:CDS
TGCGAGCTCTGAGTTCTCTA+TGG 0.421587 7.2:+18789163 MS.gene014002:CDS
ACCCATTCAATGAGTGGAAA+TGG 0.422756 7.2:+18787450 MS.gene014002:CDS
GGAAAGCTTGGTACTCTTGA+GGG 0.428090 7.2:+18788642 MS.gene014002:CDS
CTGTAGCTCTTGCTCTAGTT+GGG 0.432408 7.2:-18787263 None:intergenic
GTTGCAACGTTTGCTGCCTC+AGG 0.435590 7.2:-18789068 None:intergenic
CTGCAATGCGTCCATTCCTT+GGG 0.435984 7.2:-18788523 None:intergenic
AAGAGCTCGAGCTGATTGTC+TGG 0.439976 7.2:-18789112 None:intergenic
CTCTATGGCTTGCACGGCCA+AGG 0.444992 7.2:+18789178 MS.gene014002:CDS
TTTGAAACAGTTTACTCCCT+TGG 0.445923 7.2:-18789195 None:intergenic
TGAAAGATCAAAAGACAAAT+CGG 0.446752 7.2:+18786959 MS.gene014002:CDS
TGGAAATGTGGCCAATTACA+TGG 0.448525 7.2:+18788599 MS.gene014002:CDS
GCTGCAATGCGTCCATTCCT+TGG 0.454033 7.2:-18788524 None:intergenic
ATAGGCAAACCAATGAACTA+AGG 0.455979 7.2:+18788061 MS.gene014002:CDS
CCAGAAGCACCTGATGGGTT+GGG 0.456476 7.2:-18788579 None:intergenic
GACACTAACAAGGTTGTTAA+CGG 0.458291 7.2:+18784995 MS.gene014002:CDS
ACCATTTCCACTCATTGAAT+GGG 0.458496 7.2:-18787451 None:intergenic
GCTACAGCGAGCACGCCAGC+AGG 0.459908 7.2:+18787279 MS.gene014002:CDS
AAAAGACAAATCGGATCAAA+AGG 0.461930 7.2:+18786968 MS.gene014002:CDS
TCCAGAAGCACCTGATGGGT+TGG 0.465437 7.2:-18788580 None:intergenic
CTCAATTTGAAGATATCTAC+AGG 0.469063 7.2:+18788145 MS.gene014002:CDS
GAAATCCTAGAGATTGTTCA+AGG 0.473552 7.2:-18785907 None:intergenic
ACCTCTCTGCTGCAATTGCT+GGG 0.478042 7.2:+18786651 MS.gene014002:CDS
CACATGAAACACCTCTCAGC+TGG 0.482882 7.2:-18788228 None:intergenic
GGGACAAATGGCTATGGCCA+TGG 0.486901 7.2:+18788620 MS.gene014002:CDS
GGCCAATTACATGGGACAAA+TGG 0.487544 7.2:+18788608 MS.gene014002:CDS
TGCAACAATTAGAGAGCAGC+AGG 0.488377 7.2:+18787230 MS.gene014002:CDS
AATGGTTCACCCAACCCATC+AGG 0.491558 7.2:+18788570 MS.gene014002:CDS
GAGAACTCAGAGCTCGCAGC+CGG 0.499226 7.2:-18789158 None:intergenic
GGAGCCCTTGAACAATCTCT+AGG 0.499416 7.2:+18785902 MS.gene014002:CDS
CTGCAATAAATTCTCATGCT+GGG 0.499442 7.2:+18788085 MS.gene014002:CDS
TTGGATTTCAGGGGCATGGA+GGG 0.504205 7.2:+18785845 MS.gene014002:intron
ACACTAACAAGGTTGTTAAC+GGG 0.504918 7.2:+18784996 MS.gene014002:CDS
AAACGTTGCAACAAATGCTT+CGG 0.506047 7.2:+18789079 MS.gene014002:CDS
GAGAGGTGTTTCATGTGGAT+TGG 0.507638 7.2:+18788234 MS.gene014002:CDS
TGTTCAGACGTTAAGACGGC+TGG 0.509648 7.2:+18787055 MS.gene014002:intron
GGTACAGTCCATTGCAAACT+CGG 0.515997 7.2:+18786622 MS.gene014002:intron
GCTGCAATAAATTCTCATGC+TGG 0.516591 7.2:+18788084 MS.gene014002:CDS
AGGTGTTTCATGTGGATTGG+AGG 0.518347 7.2:+18788237 MS.gene014002:CDS
GAATATCAGCACCTAAAGCT+TGG 0.527661 7.2:-18786493 None:intergenic
GGGAGAGTCCAACATGGCTG+AGG 0.529600 7.2:+18786748 MS.gene014002:CDS
GCAATCACTTTCCGAGACAT+TGG 0.530262 7.2:+18788545 MS.gene014002:CDS
GCTTTCATTTGATTAAACAC+TGG 0.536527 7.2:-18786464 None:intergenic
TACAGAAGACAAGAATCAAA+TGG 0.538000 7.2:+18786796 MS.gene014002:CDS
CAATAAGTGATTATTTCTCC+CGG 0.538111 7.2:+18789139 MS.gene014002:CDS
GCTATGGCCATGGGAAAGCT+TGG 0.544267 7.2:+18788630 MS.gene014002:CDS
TTAACTGAACAACAGTTGAT+GGG 0.552406 7.2:+18788453 MS.gene014002:CDS
GGACAAATGGCTATGGCCAT+GGG 0.556028 7.2:+18788621 MS.gene014002:CDS
AGACGCTCTTTCCCAAGGAA+TGG 0.556679 7.2:+18788512 MS.gene014002:CDS
GTTTATATCCGAGTTTGCAA+TGG 0.558175 7.2:-18786630 None:intergenic
GGGAAAGCTTGGTACTCTTG+AGG 0.558797 7.2:+18788641 MS.gene014002:CDS
ATCTCTAGGATTTCGTGTTG+AGG 0.565350 7.2:+18785916 MS.gene014002:CDS
TTAGATGGAGGTGCGTAGCT+CGG 0.566017 7.2:-18785022 None:intergenic
AGCGCTTCCCTCAGCCATGT+TGG 0.566699 7.2:-18786756 None:intergenic
ACATTTCCAGAAGCACCTGA+TGG 0.566763 7.2:-18788585 None:intergenic
GAAGATATCTACAGGCTGAA+AGG 0.567290 7.2:+18788153 MS.gene014002:CDS
TCCACATTCTATCAGGAATG+TGG 0.571375 7.2:+18788199 MS.gene014002:CDS
TCTTGAGGGATTTCTTCGCC+AGG 0.573076 7.2:+18788656 MS.gene014002:CDS
ATCAGGTGCTTCTGGAAATG+TGG 0.573606 7.2:+18788587 MS.gene014002:CDS
TGGTTATTGATGGGCAGTAG+AGG 0.574524 7.2:+18784959 None:intergenic
TACATGGAATTATTAGATGG+AGG 0.577181 7.2:-18785034 None:intergenic
TCTATGGCTTGCACGGCCAA+GGG 0.578391 7.2:+18789179 MS.gene014002:CDS
TAGGCAAACCAATGAACTAA+GGG 0.579382 7.2:+18788062 MS.gene014002:CDS
CATTTCCAGAAGCACCTGAT+GGG 0.580742 7.2:-18788584 None:intergenic
CAGCTGAGAGGTGTTTCATG+TGG 0.583907 7.2:+18788229 MS.gene014002:CDS
TGCAATAAATTCTCATGCTG+GGG 0.590748 7.2:+18788086 MS.gene014002:CDS
TCCACATTCCTGATAGAATG+TGG 0.593998 7.2:-18788200 None:intergenic
TTACATGGGACAAATGGCTA+TGG 0.598092 7.2:+18788614 MS.gene014002:CDS
AGAACTCAGAGCTCGCAGCC+GGG 0.599159 7.2:-18789157 None:intergenic
TGAAATTGTCGACAATGGTA+CGG 0.603907 7.2:-18788119 None:intergenic
TGAGTTCTCTATGGCTTGCA+CGG 0.606772 7.2:+18789172 MS.gene014002:CDS
GCTGAAGACGCTCTTTCCCA+AGG 0.608444 7.2:+18788507 MS.gene014002:CDS
GAGCAGACCCATTCAATGAG+TGG 0.614912 7.2:+18787444 MS.gene014002:CDS
GGAGAGTCCAACATGGCTGA+GGG 0.616774 7.2:+18786749 MS.gene014002:CDS
CCAAAATCAGAAATTCGAGA+AGG 0.617363 7.2:-18785881 None:intergenic
TGAACCATTAGCCAATGTCT+CGG 0.617863 7.2:-18788556 None:intergenic
GGCGGCCATCGTGAGAATTG+GGG 0.627011 7.2:+18786728 MS.gene014002:CDS
AAGAGTACCAAGCTTTCCCA+TGG 0.628858 7.2:-18788637 None:intergenic
GGAAATGTGGCCAATTACAT+GGG 0.630650 7.2:+18788600 MS.gene014002:CDS
AACTGCTGAGGACACTAACA+AGG 0.634040 7.2:+18784985 MS.gene014002:CDS
AATTTGGCTTCAACATCTGG+CGG 0.636343 7.2:+18786710 MS.gene014002:CDS
TTTGGATTTCAGGGGCATGG+AGG 0.641756 7.2:+18785844 MS.gene014002:intron
AGTCATGAAATTGTCGACAA+TGG 0.650887 7.2:-18788124 None:intergenic
CAGTAGAGGTAGAACTGCTG+AGG 0.651706 7.2:+18784973 MS.gene014002:CDS
ACCCAGCAATTGCAGCAGAG+AGG 0.653003 7.2:-18786652 None:intergenic
ACTCTCCCCAATTCTCACGA+TGG 0.657176 7.2:-18786733 None:intergenic
CTGCCAGGAAAAGCCGACTG+AGG 0.660519 7.2:+18787093 MS.gene014002:CDS
GTTTATAGGCTGATAACCTG+AGG 0.665954 7.2:+18789052 MS.gene014002:intron
AAATCCTAGAGATTGTTCAA+GGG 0.671979 7.2:-18785906 None:intergenic
TGTGGAAGACTCCAGCTGAG+AGG 0.690086 7.2:+18788217 MS.gene014002:CDS
GAATTGGGGAGAGTCCAACA+TGG 0.702168 7.2:+18786742 MS.gene014002:CDS
TTGATGCAGAATACGCACGA+TGG 0.731911 7.2:+18788025 MS.gene014002:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGCATATTAAATTAATAAAA+GGG - chr7.2:18786216-18786235 None:intergenic 10.0%
!!! TATCATTATTTACTTTTTTA+AGG - chr7.2:18786353-18786372 None:intergenic 10.0%
!! AAAAAAAAACAACAAAAAAG+GGG - chr7.2:18785992-18786011 None:intergenic 15.0%
!! AAGATGATATACAAATAAAT+AGG - chr7.2:18786438-18786457 None:intergenic 15.0%
!! AAGATTAACATTAAACAAAA+GGG - chr7.2:18785074-18785093 None:intergenic 15.0%
!! ATTTACAATTTAACAGAAAA+AGG - chr7.2:18787131-18787150 None:intergenic 15.0%
!! CAAAAAAAAACAACAAAAAA+GGG - chr7.2:18785993-18786012 None:intergenic 15.0%
!! CAGCATATTAAATTAATAAA+AGG - chr7.2:18786217-18786236 None:intergenic 15.0%
!! TAAGATTAACATTAAACAAA+AGG - chr7.2:18785075-18785094 None:intergenic 15.0%
!!! GTTTTGTTTAAATTTATTGT+AGG + chr7.2:18785131-18785150 MS.gene014002:intron 15.0%
!!! TTGATAATTCTTAAATTTAG+AGG + chr7.2:18785340-18785359 MS.gene014002:intron 15.0%
!!! TTGATTATTTATCTTTTCTA+GGG + chr7.2:18787399-18787418 MS.gene014002:intron 15.0%
!!! TTGCAATTTATTGATTTTAT+TGG - chr7.2:18786552-18786571 None:intergenic 15.0%
!!! TTTGATTATTTATCTTTTCT+AGG + chr7.2:18787398-18787417 MS.gene014002:intron 15.0%
!! AAATATCTGTATATGTTAAG+AGG - chr7.2:18787720-18787739 None:intergenic 20.0%
!! ACAAAATGTTAAACATATGT+TGG - chr7.2:18785818-18785837 None:intergenic 20.0%
!! ATGAAAAAAGAAACATATCA+CGG - chr7.2:18787663-18787682 None:intergenic 20.0%
!! ATTGCTTTACTTTAATCATA+CGG + chr7.2:18786821-18786840 MS.gene014002:intron 20.0%
!! ATTTACATGGAATTATTAGA+TGG - chr7.2:18785040-18785059 None:intergenic 20.0%
!! CAAAAGCAAAATTTAACATA+TGG - chr7.2:18787037-18787056 None:intergenic 20.0%
!! CAAAATGTTAAACATATGTT+GGG - chr7.2:18785817-18785836 None:intergenic 20.0%
!! GCAAAAAAAAACAACAAAAA+AGG - chr7.2:18785994-18786013 None:intergenic 20.0%
!! TATACTCTTTATCACTTTAT+TGG - chr7.2:18788870-18788889 None:intergenic 20.0%
!!! AAGAGGTTTGATATTTTTAA+AGG - chr7.2:18787703-18787722 None:intergenic 20.0%
!!! AGATGAACAAAGTTTTAAAT+TGG + chr7.2:18785363-18785382 MS.gene014002:intron 20.0%
!!! ATGAACAAAGTTTTAAATTG+GGG + chr7.2:18785365-18785384 MS.gene014002:intron 20.0%
!!! GATATTTTTAAAGGAAATGT+TGG - chr7.2:18787694-18787713 None:intergenic 20.0%
!!! GATGAACAAAGTTTTAAATT+GGG + chr7.2:18785364-18785383 MS.gene014002:intron 20.0%
!!! GTGAACTTTTGTTTTATTAA+GGG + chr7.2:18786020-18786039 MS.gene014002:intron 20.0%
!!! TGTGAACTTTTGTTTTATTA+AGG + chr7.2:18786019-18786038 MS.gene014002:intron 20.0%
!!! TGTTAGAACTTATTTTTAGT+CGG + chr7.2:18787758-18787777 MS.gene014002:intron 20.0%
!!! TTAACATTTTGTCATGATTT+TGG + chr7.2:18785826-18785845 MS.gene014002:intron 20.0%
! AAAGGAAAACAAAAGTGAAT+TGG - chr7.2:18789024-18789043 None:intergenic 25.0%
! AATAGCAATCTTCTATGAAA+AGG - chr7.2:18785663-18785682 None:intergenic 25.0%
! AATTAATTGTGTACCTTAGA+GGG + chr7.2:18788894-18788913 MS.gene014002:intron 25.0%
! ACAAATAAATAGGTTAATCG+AGG - chr7.2:18786428-18786447 None:intergenic 25.0%
! ATGATGTTGAATTGAAGTTA+GGG + chr7.2:18785241-18785260 MS.gene014002:intron 25.0%
! ATGTTAATCTTACTCTTGAT+TGG + chr7.2:18785083-18785102 MS.gene014002:intron 25.0%
! GTAGAAATTATGCATGTTAT+TGG + chr7.2:18785212-18785231 MS.gene014002:intron 25.0%
! GTTATGTTCTATGAAGTAAA+CGG - chr7.2:18785526-18785545 None:intergenic 25.0%
! TATGATGTTGAATTGAAGTT+AGG + chr7.2:18785240-18785259 MS.gene014002:intron 25.0%
! TGAAAGATCAAAAGACAAAT+CGG + chr7.2:18786959-18786978 MS.gene014002:CDS 25.0%
! TGACTATATAAACCATCTAA+AGG - chr7.2:18785159-18785178 None:intergenic 25.0%
!! CAAAAAGAAAAGAGCATATA+AGG - chr7.2:18785632-18785651 None:intergenic 25.0%
!! GGAATATTTATTTCAAGTAC+TGG + chr7.2:18787420-18787439 MS.gene014002:CDS 25.0%
!! TAACATTGAATTTAAAGCTG+TGG + chr7.2:18787580-18787599 MS.gene014002:intron 25.0%
!! TATATGCTCTTTTCTTTTTG+TGG + chr7.2:18785632-18785651 MS.gene014002:intron 25.0%
!! TGACTTAAAATTTCCACTTT+TGG + chr7.2:18786151-18786170 MS.gene014002:intron 25.0%
!!! AATGAAGATGGCTATTTTAT+TGG - chr7.2:18786907-18786926 None:intergenic 25.0%
!!! GATTAAGTGTTGGATTTTTA+AGG + chr7.2:18788348-18788367 MS.gene014002:intron 25.0%
!!! TAAACGGAAGTATTTTTACA+GGG - chr7.2:18785510-18785529 None:intergenic 25.0%
!!! TGGTCTTGCTATTAATTTTA+GGG + chr7.2:18785103-18785122 MS.gene014002:intron 25.0%
!!! TTGGTCTTGCTATTAATTTT+AGG + chr7.2:18785102-18785121 MS.gene014002:intron 25.0%
AAAAATTCCTCCAAGTAGAA+GGG - chr7.2:18787541-18787560 None:intergenic 30.0%
AAAAGACAAATCGGATCAAA+AGG + chr7.2:18786968-18786987 MS.gene014002:CDS 30.0%
AAATCCTAGAGATTGTTCAA+GGG - chr7.2:18785909-18785928 None:intergenic 30.0%
ATCAACTGTTGTTCAGTTAA+AGG - chr7.2:18788453-18788472 None:intergenic 30.0%
ATGCAAAATCCATTAACTCT+TGG + chr7.2:18787612-18787631 MS.gene014002:intron 30.0%
ATTCCATGTAAATTTGTCTG+AGG + chr7.2:18785047-18785066 MS.gene014002:intron 30.0%
ATTCTTCTTTCCATTCATTC+AGG + chr7.2:18787201-18787220 MS.gene014002:intron 30.0%
CAAAAACGTCAACACAATTT+AGG - chr7.2:18787985-18788004 None:intergenic 30.0%
CCATAGAGAATAAACAAATG+AGG - chr7.2:18788298-18788317 None:intergenic 30.0%
CCATGTTTCAAAGCTAAAAA+GGG - chr7.2:18785747-18785766 None:intergenic 30.0%
CCTCATTTGTTTATTCTCTA+TGG + chr7.2:18788295-18788314 MS.gene014002:intron 30.0%
CTCAAGATCTAACAACAAAT+CGG - chr7.2:18785711-18785730 None:intergenic 30.0%
CTCAATTTGAAGATATCTAC+AGG + chr7.2:18788145-18788164 MS.gene014002:CDS 30.0%
CTGCAAAACAAAAATGAAGA+TGG - chr7.2:18786919-18786938 None:intergenic 30.0%
GAAATAGACAGTTAATTACC+TGG - chr7.2:18788677-18788696 None:intergenic 30.0%
GAATTAATTGTGTACCTTAG+AGG + chr7.2:18788893-18788912 MS.gene014002:intron 30.0%
GATAACGATTGATTAAGTGT+TGG + chr7.2:18788338-18788357 MS.gene014002:intron 30.0%
GCTTTCATTTGATTAAACAC+TGG - chr7.2:18786467-18786486 None:intergenic 30.0%
GTCTTTAATCACACATATGA+TGG - chr7.2:18787852-18787871 None:intergenic 30.0%
GTTATTGAATGAAACTGTGT+CGG - chr7.2:18788763-18788782 None:intergenic 30.0%
TACAAACAAATGCAACAAGT+TGG - chr7.2:18786312-18786331 None:intergenic 30.0%
TACAGAAGACAAGAATCAAA+TGG + chr7.2:18786796-18786815 MS.gene014002:CDS 30.0%
TACAGACATAAACATGACAA+CGG - chr7.2:18788819-18788838 None:intergenic 30.0%
TACATGGAATTATTAGATGG+AGG - chr7.2:18785037-18785056 None:intergenic 30.0%
TCCATGTTTCAAAGCTAAAA+AGG - chr7.2:18785748-18785767 None:intergenic 30.0%
TGAAACATGGATTTCATCAT+TGG + chr7.2:18785757-18785776 MS.gene014002:intron 30.0%
TTAACTGAACAACAGTTGAT+GGG + chr7.2:18788453-18788472 MS.gene014002:CDS 30.0%
TTACTTCATAGAACATAACG+CGG + chr7.2:18785527-18785546 MS.gene014002:intron 30.0%
TTATCAGCCTATAAACATGA+AGG - chr7.2:18789048-18789067 None:intergenic 30.0%
TTTAACTGAACAACAGTTGA+TGG + chr7.2:18788452-18788471 MS.gene014002:CDS 30.0%
! AATGCTGTTGATGCTTTTAT+AGG + chr7.2:18785422-18785441 MS.gene014002:intron 30.0%
! CAATAAGTGATTATTTCTCC+CGG + chr7.2:18789139-18789158 MS.gene014002:CDS 30.0%
! GTTATTCGTACATCTAAAAC+TGG + chr7.2:18788390-18788409 MS.gene014002:intron 30.0%
! TATCTCAACTTCCTTCTTTT+TGG + chr7.2:18788699-18788718 MS.gene014002:intron 30.0%
! TCCTTTTCCTTCATGTTTAT+AGG + chr7.2:18789038-18789057 MS.gene014002:intron 30.0%
! TGTCATGATTTTGGATTTCA+GGG + chr7.2:18785835-18785854 MS.gene014002:intron 30.0%
! TTCTACTTGGAGGAATTTTT+CGG + chr7.2:18787541-18787560 MS.gene014002:intron 30.0%
! TTGTCATGATTTTGGATTTC+AGG + chr7.2:18785834-18785853 MS.gene014002:intron 30.0%
! TTTGTCTTTTGATCTTTCAC+TGG - chr7.2:18786958-18786977 None:intergenic 30.0%
!! CTAAATTGTGTTGACGTTTT+TGG + chr7.2:18787983-18788002 MS.gene014002:intron 30.0%
!! TCAATTTGGTGCTTTAAGTA+AGG + chr7.2:18786514-18786533 MS.gene014002:CDS 30.0%
!! TCTTTGTTGCTATTTCATTC+TGG + chr7.2:18787351-18787370 MS.gene014002:intron 30.0%
!! TTAGGTGCTGATATTCAATT+TGG + chr7.2:18786500-18786519 MS.gene014002:CDS 30.0%
!!! AGAGTTAATGGATTTTGCAT+TGG - chr7.2:18787612-18787631 None:intergenic 30.0%
!!! GGTCTTGCTATTAATTTTAG+GGG + chr7.2:18785104-18785123 MS.gene014002:intron 30.0%
!!! GTAAACGGAAGTATTTTTAC+AGG - chr7.2:18785511-18785530 None:intergenic 30.0%
!!! TACTTTTTTAAGGACTTCTC+TGG - chr7.2:18786343-18786362 None:intergenic 30.0%
AAACGTTGCAACAAATGCTT+CGG + chr7.2:18789079-18789098 MS.gene014002:CDS 35.0%
AAAGCAAATAGCCAAGCTTT+AGG + chr7.2:18786482-18786501 MS.gene014002:CDS 35.0%
AAATAGCAAAACAAACCTGC+TGG - chr7.2:18787297-18787316 None:intergenic 35.0%
ACACTAACAAGGTTGTTAAC+GGG + chr7.2:18784996-18785015 MS.gene014002:CDS 35.0%
ACATAAACATGACAACGGAA+TGG - chr7.2:18788814-18788833 None:intergenic 35.0%
ACCATTTCCACTCATTGAAT+GGG - chr7.2:18787454-18787473 None:intergenic 35.0%
AGGTTAATCGAGGATTCATA+AGG - chr7.2:18786418-18786437 None:intergenic 35.0%
AGTATAAGCACTAAGAACAC+AGG - chr7.2:18786241-18786260 None:intergenic 35.0%
AGTCATGAAATTGTCGACAA+TGG - chr7.2:18788127-18788146 None:intergenic 35.0%
ATAGGCAAACCAATGAACTA+AGG + chr7.2:18788061-18788080 MS.gene014002:CDS 35.0%
CATACGGTTTATTCTGAATC+TGG + chr7.2:18786837-18786856 MS.gene014002:intron 35.0%
CATACTTCTGCTAAGATTCA+TGG - chr7.2:18785945-18785964 None:intergenic 35.0%
CATGAAAAAAATTGATGCCG+TGG + chr7.2:18785449-18785468 MS.gene014002:intron 35.0%
CCAAAATCAGAAATTCGAGA+AGG - chr7.2:18785884-18785903 None:intergenic 35.0%
CTGCAATAAATTCTCATGCT+GGG + chr7.2:18788085-18788104 MS.gene014002:CDS 35.0%
CTTGATATTGGAGAGAATTG+CGG + chr7.2:18785396-18785415 MS.gene014002:intron 35.0%
GAAAAATTCCTCCAAGTAGA+AGG - chr7.2:18787542-18787561 None:intergenic 35.0%
GAAAATAGTAGTCTGTAGCA+TGG + chr7.2:18787921-18787940 MS.gene014002:intron 35.0%
GAAATCCTAGAGATTGTTCA+AGG - chr7.2:18785910-18785929 None:intergenic 35.0%
GAATTGAAGTTAGGGTCTAT+TGG + chr7.2:18785249-18785268 MS.gene014002:intron 35.0%
GACACTAACAAGGTTGTTAA+CGG + chr7.2:18784995-18785014 MS.gene014002:CDS 35.0%
GCCTATAAACATGAAGGAAA+AGG - chr7.2:18789042-18789061 None:intergenic 35.0%
GTTTATATCCGAGTTTGCAA+TGG - chr7.2:18786633-18786652 None:intergenic 35.0%
TACCATTTCCACTCATTGAA+TGG - chr7.2:18787455-18787474 None:intergenic 35.0%
TAGGCAAACCAATGAACTAA+GGG + chr7.2:18788062-18788081 MS.gene014002:CDS 35.0%
TCTTCACTTGCATGTATGTA+CGG + chr7.2:18786601-18786620 MS.gene014002:intron 35.0%
TGAAATTGTCGACAATGGTA+CGG - chr7.2:18788122-18788141 None:intergenic 35.0%
TGCAATAAATTCTCATGCTG+GGG + chr7.2:18788086-18788105 MS.gene014002:CDS 35.0%
TTATTGTAGGTGCCTTTAGA+TGG + chr7.2:18785144-18785163 MS.gene014002:intron 35.0%
TTTGTCAAGCCAAGAGTTAA+TGG - chr7.2:18787624-18787643 None:intergenic 35.0%
! CCTTCTCGAATTTCTGATTT+TGG + chr7.2:18785881-18785900 MS.gene014002:CDS 35.0%
! CTTAGCAGAAGTATGTCATT+TGG + chr7.2:18785950-18785969 MS.gene014002:intron 35.0%
! CTTTTGTTCAGACGTTAAGA+CGG + chr7.2:18787051-18787070 MS.gene014002:intron 35.0%
! GATGGTTAGAAGAGCATAAT+AGG + chr7.2:18788043-18788062 MS.gene014002:CDS 35.0%
! GATGTTTTCCACATTCTATC+AGG + chr7.2:18788192-18788211 MS.gene014002:CDS 35.0%
! GTCATGATTTTGGATTTCAG+GGG + chr7.2:18785836-18785855 MS.gene014002:intron 35.0%
!!! CCCTTTTTAGCTTTGAAACA+TGG + chr7.2:18785744-18785763 MS.gene014002:intron 35.0%
!!! TTTTGTTTTGCAGCCTGAAA+GGG + chr7.2:18786926-18786945 MS.gene014002:intron 35.0%
!!! TTTTTGTTTTGCAGCCTGAA+AGG + chr7.2:18786925-18786944 MS.gene014002:intron 35.0%
AAGCTAAAAAGGGTCCAACA+TGG - chr7.2:18785737-18785756 None:intergenic 40.0%
ACATATCACGGCAAATGTCA+TGG - chr7.2:18787651-18787670 None:intergenic 40.0%
ACCCATTCAATGAGTGGAAA+TGG + chr7.2:18787450-18787469 MS.gene014002:CDS 40.0%
AGCCATTTGTCCCATGTAAT+TGG - chr7.2:18788613-18788632 None:intergenic 40.0%
ATAGTAGTCTGTAGCATGGA+TGG + chr7.2:18787925-18787944 MS.gene014002:intron 40.0%
ATGACAACGGAATGGATACA+CGG - chr7.2:18788806-18788825 None:intergenic 40.0%
CCAGATGTTGAAGCCAAATT+TGG - chr7.2:18786710-18786729 None:intergenic 40.0%
CGCAATTCTCTCCAATATCA+AGG - chr7.2:18785398-18785417 None:intergenic 40.0%
GAAAAAAATTGATGCCGTGG+TGG + chr7.2:18785452-18785471 MS.gene014002:intron 40.0%
GAAGATATCTACAGGCTGAA+AGG + chr7.2:18788153-18788172 MS.gene014002:CDS 40.0%
GAATATCAGCACCTAAAGCT+TGG - chr7.2:18786496-18786515 None:intergenic 40.0%
GCAGCTTCTTGTAAGTCATT+TGG + chr7.2:18788425-18788444 MS.gene014002:intron 40.0%
GCTGCAATAAATTCTCATGC+TGG + chr7.2:18788084-18788103 MS.gene014002:CDS 40.0%
GGAAATGTGGCCAATTACAT+GGG + chr7.2:18788600-18788619 MS.gene014002:CDS 40.0%
GGATACACGGTATACAACAA+CGG - chr7.2:18788793-18788812 None:intergenic 40.0%
GGGGATACTTACCTTGATAT+TGG + chr7.2:18785384-18785403 MS.gene014002:intron 40.0%
GGTCCTCAGACAAATTTACA+TGG - chr7.2:18785053-18785072 None:intergenic 40.0%
GTTTATAGGCTGATAACCTG+AGG + chr7.2:18789052-18789071 MS.gene014002:intron 40.0%
TAGATCTTGAGCATCCATGT+TGG + chr7.2:18785720-18785739 MS.gene014002:intron 40.0%
TATTGCAGCCCTTAGTTCAT+TGG - chr7.2:18788073-18788092 None:intergenic 40.0%
TCCACATTCCTGATAGAATG+TGG - chr7.2:18788203-18788222 None:intergenic 40.0%
TCCACATTCTATCAGGAATG+TGG + chr7.2:18788199-18788218 MS.gene014002:CDS 40.0%
TCGGTCATCTGAACTTCTTA+AGG + chr7.2:18788263-18788282 MS.gene014002:CDS 40.0%
TGAACCATTAGCCAATGTCT+CGG - chr7.2:18788559-18788578 None:intergenic 40.0%
TGCACATATGCCTGAATGAA+TGG - chr7.2:18787214-18787233 None:intergenic 40.0%
TGGAAATGTGGCCAATTACA+TGG + chr7.2:18788599-18788618 MS.gene014002:CDS 40.0%
TGTTTCTTCTGCATGCAATC+TGG + chr7.2:18787163-18787182 MS.gene014002:intron 40.0%
TTACATGGGACAAATGGCTA+TGG + chr7.2:18788614-18788633 MS.gene014002:CDS 40.0%
! AATTTGGCTTCAACATCTGG+CGG + chr7.2:18786710-18786729 MS.gene014002:CDS 40.0%
! ACATGCAAGTGAAGAGTGTA+AGG - chr7.2:18786596-18786615 None:intergenic 40.0%
! CCAAATTTGGCTTCAACATC+TGG + chr7.2:18786707-18786726 MS.gene014002:CDS 40.0%
! CTCAACTTCCTTCTTTTTGG+AGG + chr7.2:18788702-18788721 MS.gene014002:intron 40.0%
!! ATCTCTAGGATTTCGTGTTG+AGG + chr7.2:18785916-18785935 MS.gene014002:CDS 40.0%
!!! TTTGTTTTGCAGCCTGAAAG+GGG + chr7.2:18786927-18786946 MS.gene014002:intron 40.0%
AAAAGACGCGCTGCCAAATT+TGG + chr7.2:18786694-18786713 MS.gene014002:CDS 45.0%
AACTGCTGAGGACACTAACA+AGG + chr7.2:18784985-18785004 MS.gene014002:CDS 45.0%
AATAGTTGTTCCCCTCTCGA+TGG + chr7.2:18786390-18786409 MS.gene014002:intron 45.0%
ACTGACAATTCGAGTCAGCA+AGG - chr7.2:18785566-18785585 None:intergenic 45.0%
ATTCATAAGGCTCCATCGAG+AGG - chr7.2:18786405-18786424 None:intergenic 45.0%
CTGGTTAAGGAAGCCAAAAG+TGG - chr7.2:18786167-18786186 None:intergenic 45.0%
CTGTAGCTCTTGCTCTAGTT+GGG - chr7.2:18787266-18787285 None:intergenic 45.0%
GAAAAGCCGACTGAGGAAAA+AGG + chr7.2:18787100-18787119 MS.gene014002:CDS 45.0%
GCAATCACTTTCCGAGACAT+TGG + chr7.2:18788545-18788564 MS.gene014002:CDS 45.0%
GCATCAAAGTCCCTTCTACT+TGG + chr7.2:18787528-18787547 MS.gene014002:intron 45.0%
GGAAAGCTTGGTACTCTTGA+GGG + chr7.2:18788642-18788661 MS.gene014002:CDS 45.0%
GGCCAATTACATGGGACAAA+TGG + chr7.2:18788608-18788627 MS.gene014002:CDS 45.0%
GGTACAGTCCATTGCAAACT+CGG + chr7.2:18786622-18786641 MS.gene014002:intron 45.0%
GTAATGCATCTCACCCTCTA+AGG - chr7.2:18788910-18788929 None:intergenic 45.0%
TCAAAGTCCCTTCTACTTGG+AGG + chr7.2:18787531-18787550 MS.gene014002:intron 45.0%
TCAAGCTTGCGTCACACAAT+TGG - chr7.2:18787496-18787515 None:intergenic 45.0%
TGCAACAATTAGAGAGCAGC+AGG + chr7.2:18787230-18787249 MS.gene014002:CDS 45.0%
TTCATAAGGCTCCATCGAGA+GGG - chr7.2:18786404-18786423 None:intergenic 45.0%
TTGATGCAGAATACGCACGA+TGG + chr7.2:18788025-18788044 MS.gene014002:CDS 45.0%
! ATCAGGTGCTTCTGGAAATG+TGG + chr7.2:18788587-18788606 MS.gene014002:CDS 45.0%
! CTTTCCGAGACATTGGCTAA+TGG + chr7.2:18788552-18788571 MS.gene014002:CDS 45.0%
! GATTTTGGATTTCAGGGGCA+TGG + chr7.2:18785841-18785860 MS.gene014002:intron 45.0%
! GCTGTACCTTTTTCCTCAGT+CGG - chr7.2:18787109-18787128 None:intergenic 45.0%
! TGAGTTCTCTATGGCTTGCA+CGG + chr7.2:18789172-18789191 MS.gene014002:CDS 45.0%
! TTAGGGTCTATTGGTTGCAG+AGG + chr7.2:18785258-18785277 MS.gene014002:intron 45.0%
!! AAGAGTACCAAGCTTTCCCA+TGG - chr7.2:18788640-18788659 None:intergenic 45.0%
!! ACATTTCCAGAAGCACCTGA+TGG - chr7.2:18788588-18788607 None:intergenic 45.0%
!! AGGTGTTTCATGTGGATTGG+AGG + chr7.2:18788237-18788256 MS.gene014002:CDS 45.0%
!! CATTTCCAGAAGCACCTGAT+GGG - chr7.2:18788587-18788606 None:intergenic 45.0%
!! GAGAGGTGTTTCATGTGGAT+TGG + chr7.2:18788234-18788253 MS.gene014002:CDS 45.0%
!! TCATGTGGATTGGAGGCTTT+CGG + chr7.2:18788244-18788263 MS.gene014002:CDS 45.0%
!! TTGTTTTGCAGCCTGAAAGG+GGG + chr7.2:18786928-18786947 MS.gene014002:intron 45.0%
!! TTTTTGGTGTGCAGGTGCAA+TGG + chr7.2:18787999-18788018 MS.gene014002:intron 45.0%
!!! TGTTGACGTTTTTGGTGTGC+AGG + chr7.2:18787991-18788010 MS.gene014002:intron 45.0%
AAATGTTAACCAGTGCCCCC+GGG + chr7.2:18786043-18786062 MS.gene014002:intron 50.0%
AACCTCTCTGCTGCAATTGC+TGG + chr7.2:18786650-18786669 MS.gene014002:CDS 50.0%
AAGAGCTCGAGCTGATTGTC+TGG - chr7.2:18789115-18789134 None:intergenic 50.0%
AATGGTTCACCCAACCCATC+AGG + chr7.2:18788570-18788589 MS.gene014002:CDS 50.0%
ACCTCTCTGCTGCAATTGCT+GGG + chr7.2:18786651-18786670 MS.gene014002:CDS 50.0%
ACTCTCCCCAATTCTCACGA+TGG - chr7.2:18786736-18786755 None:intergenic 50.0%
AGACGCTCTTTCCCAAGGAA+TGG + chr7.2:18788512-18788531 MS.gene014002:CDS 50.0%
AGCTTGCGTCACACAATTGG+AGG - chr7.2:18787493-18787512 None:intergenic 50.0%
CACATGAAACACCTCTCAGC+TGG - chr7.2:18788231-18788250 None:intergenic 50.0%
CACTCACACATGTCGAACAC+CGG - chr7.2:18788733-18788752 None:intergenic 50.0%
CAGTAGAGGTAGAACTGCTG+AGG + chr7.2:18784973-18784992 MS.gene014002:CDS 50.0%
CTCAAAATCGTGAAGCTGCC+AGG + chr7.2:18787078-18787097 MS.gene014002:CDS 50.0%
CTGCAATGCGTCCATTCCTT+GGG - chr7.2:18788526-18788545 None:intergenic 50.0%
GAAATGTTAACCAGTGCCCC+CGG + chr7.2:18786042-18786061 MS.gene014002:intron 50.0%
GAATTGGGGAGAGTCCAACA+TGG + chr7.2:18786742-18786761 MS.gene014002:CDS 50.0%
GAGCAGACCCATTCAATGAG+TGG + chr7.2:18787444-18787463 MS.gene014002:CDS 50.0%
GCTGTAGCTCTTGCTCTAGT+TGG - chr7.2:18787267-18787286 None:intergenic 50.0%
GGACAAATGGCTATGGCCAT+GGG + chr7.2:18788621-18788640 MS.gene014002:CDS 50.0%
GGAGCCCTTGAACAATCTCT+AGG + chr7.2:18785902-18785921 MS.gene014002:CDS 50.0%
GGGAAAGCTTGGTACTCTTG+AGG + chr7.2:18788641-18788660 MS.gene014002:CDS 50.0%
TAACTCCTTAACCAGTGCCC+CGG - chr7.2:18786064-18786083 None:intergenic 50.0%
TCATAAGGCTCCATCGAGAG+GGG - chr7.2:18786403-18786422 None:intergenic 50.0%
TCTTGAGGGATTTCTTCGCC+AGG + chr7.2:18788656-18788675 MS.gene014002:CDS 50.0%
TGTTCAGACGTTAAGACGGC+TGG + chr7.2:18787055-18787074 MS.gene014002:intron 50.0%
! TGGTTGCAGAGGAAAGTGTG+TGG + chr7.2:18785269-18785288 MS.gene014002:intron 50.0%
! TGTTTTGCAGCCTGAAAGGG+GGG + chr7.2:18786929-18786948 MS.gene014002:intron 50.0%
! TTAGATGGAGGTGCGTAGCT+CGG - chr7.2:18785025-18785044 None:intergenic 50.0%
! TTGCAGAGGAAAGTGTGTGG+TGG + chr7.2:18785272-18785291 MS.gene014002:intron 50.0%
! TTGGATTTCAGGGGCATGGA+GGG + chr7.2:18785845-18785864 MS.gene014002:intron 50.0%
! TTTGGATTTCAGGGGCATGG+AGG + chr7.2:18785844-18785863 MS.gene014002:intron 50.0%
!! CAGCTGAGAGGTGTTTCATG+TGG + chr7.2:18788229-18788248 MS.gene014002:CDS 50.0%
!! CTTCTTTTTGGAGGCGTGTC+CGG + chr7.2:18788711-18788730 MS.gene014002:intron 50.0%
!! TGCGAGCTCTGAGTTCTCTA+TGG + chr7.2:18789163-18789182 MS.gene014002:CDS 50.0%
!! TTTCCTCAGTCGGCTTTTCC+TGG - chr7.2:18787099-18787118 None:intergenic 50.0%
AACTCCTTAACCAGTGCCCC+GGG - chr7.2:18786063-18786082 None:intergenic 55.0%
AATGTTAACCAGTGCCCCCG+GGG + chr7.2:18786044-18786063 MS.gene014002:intron 55.0%
ACCCAGCAATTGCAGCAGAG+AGG - chr7.2:18786655-18786674 None:intergenic 55.0%
CGGACACGCCTCCAAAAAGA+AGG - chr7.2:18788713-18788732 None:intergenic 55.0%
GCTATGGCCATGGGAAAGCT+TGG + chr7.2:18788630-18788649 MS.gene014002:CDS 55.0%
GCTGAAGACGCTCTTTCCCA+AGG + chr7.2:18788507-18788526 MS.gene014002:CDS 55.0%
GCTGCAATGCGTCCATTCCT+TGG - chr7.2:18788527-18788546 None:intergenic 55.0%
GGAGAGTCCAACATGGCTGA+GGG + chr7.2:18786749-18786768 MS.gene014002:CDS 55.0%
GGGACAAATGGCTATGGCCA+TGG + chr7.2:18788620-18788639 MS.gene014002:CDS 55.0%
GTCATGTTAACCAGTGCCCC+CGG - chr7.2:18786194-18786213 None:intergenic 55.0%
TCACTGGATTCCCCCCTTTC+AGG - chr7.2:18786942-18786961 None:intergenic 55.0%
TCATGTTAACCAGTGCCCCC+GGG - chr7.2:18786193-18786212 None:intergenic 55.0%
TGCCGTGGTGGCACAAATCA+CGG + chr7.2:18785464-18785483 MS.gene014002:intron 55.0%
TGGCGGCCATCGTGAGAATT+GGG + chr7.2:18786727-18786746 MS.gene014002:CDS 55.0%
TGTGGAAGACTCCAGCTGAG+AGG + chr7.2:18788217-18788236 MS.gene014002:CDS 55.0%
! GACCGTGATTTGTGCCACCA+CGG - chr7.2:18785469-18785488 None:intergenic 55.0%
! GTTGCAACGTTTGCTGCCTC+AGG - chr7.2:18789071-18789090 None:intergenic 55.0%
! TCTATGGCTTGCACGGCCAA+GGG + chr7.2:18789179-18789198 MS.gene014002:CDS 55.0%
!! CCAGAAGCACCTGATGGGTT+GGG - chr7.2:18788582-18788601 None:intergenic 55.0%
!! TCCAGAAGCACCTGATGGGT+TGG - chr7.2:18788583-18788602 None:intergenic 55.0%
ACTCCTTAACCAGTGCCCCG+GGG - chr7.2:18786062-18786081 None:intergenic 60.0%
AGAACTCAGAGCTCGCAGCC+GGG - chr7.2:18789160-18789179 None:intergenic 60.0%
AGCGCTTCCCTCAGCCATGT+TGG - chr7.2:18786759-18786778 None:intergenic 60.0%
CATGTTAACCAGTGCCCCCG+GGG - chr7.2:18786192-18786211 None:intergenic 60.0%
CCCAACCCATCAGGTGCTTC+TGG + chr7.2:18788579-18788598 MS.gene014002:CDS 60.0%
CTGCCAGGAAAAGCCGACTG+AGG + chr7.2:18787093-18787112 MS.gene014002:CDS 60.0%
CTGGCGGCCATCGTGAGAAT+TGG + chr7.2:18786726-18786745 MS.gene014002:CDS 60.0%
CTTCCTTAACCAGTGCCCCG+GGG + chr7.2:18786174-18786193 MS.gene014002:intron 60.0%
GAGAACTCAGAGCTCGCAGC+CGG - chr7.2:18789161-18789180 None:intergenic 60.0%
GCTTCCTTAACCAGTGCCCC+GGG + chr7.2:18786173-18786192 MS.gene014002:intron 60.0%
GGCGGCCATCGTGAGAATTG+GGG + chr7.2:18786728-18786747 MS.gene014002:CDS 60.0%
GGCTTCCTTAACCAGTGCCC+CGG + chr7.2:18786172-18786191 MS.gene014002:intron 60.0%
GGGAGAGTCCAACATGGCTG+AGG + chr7.2:18786748-18786767 MS.gene014002:CDS 60.0%
TTCCTTAACCAGTGCCCCGG+GGG + chr7.2:18786175-18786194 MS.gene014002:intron 60.0%
! CTCTATGGCTTGCACGGCCA+AGG + chr7.2:18789178-18789197 MS.gene014002:CDS 60.0%
CTCCTTAACCAGTGCCCCGG+GGG - chr7.2:18786061-18786080 None:intergenic 65.0%
GCTACAGCGAGCACGCCAGC+AGG + chr7.2:18787279-18787298 MS.gene014002:CDS 70.0%
!! TGCCCCCGGGGCACTGGTTA+AGG + chr7.2:18786056-18786075 MS.gene014002:intron 70.0%
!! TGCCCCCGGGGCACTGGTTA+AGG - chr7.2:18786075-18786056 None:intergenic 70.0%
AACCAGTGCCCCCGGGGCAC+TGG + chr7.2:18786050-18786069 MS.gene014002:intron 75.0%
AACCAGTGCCCCCGGGGCAC+TGG - chr7.2:18786069-18786050 None:intergenic 75.0%
! AACCAGTGCCCCGGGGGCAC+TGG + chr7.2:18786181-18786200 MS.gene014002:intron 75.0%
! AACCAGTGCCCCGGGGGCAC+TGG - chr7.2:18786200-18786181 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 18784968 18789206 18784968 ID=MS.gene014002
chr7.2 mRNA 18784968 18789206 18784968 ID=MS.gene014002.t1;Parent=MS.gene014002
chr7.2 exon 18784968 18785053 18784968 ID=MS.gene014002.t1.exon1;Parent=MS.gene014002.t1
chr7.2 CDS 18784968 18785053 18784968 ID=cds.MS.gene014002.t1;Parent=MS.gene014002.t1
chr7.2 exon 18785856 18785959 18785856 ID=MS.gene014002.t1.exon2;Parent=MS.gene014002.t1
chr7.2 CDS 18785856 18785959 18785856 ID=cds.MS.gene014002.t1;Parent=MS.gene014002.t1
chr7.2 exon 18786462 18786535 18786462 ID=MS.gene014002.t1.exon3;Parent=MS.gene014002.t1
chr7.2 CDS 18786462 18786535 18786462 ID=cds.MS.gene014002.t1;Parent=MS.gene014002.t1
chr7.2 exon 18786629 18786817 18786629 ID=MS.gene014002.t1.exon4;Parent=MS.gene014002.t1
chr7.2 CDS 18786629 18786817 18786629 ID=cds.MS.gene014002.t1;Parent=MS.gene014002.t1
chr7.2 exon 18786939 18786989 18786939 ID=MS.gene014002.t1.exon5;Parent=MS.gene014002.t1
chr7.2 CDS 18786939 18786989 18786939 ID=cds.MS.gene014002.t1;Parent=MS.gene014002.t1
chr7.2 exon 18787062 18787121 18787062 ID=MS.gene014002.t1.exon6;Parent=MS.gene014002.t1
chr7.2 CDS 18787062 18787121 18787062 ID=cds.MS.gene014002.t1;Parent=MS.gene014002.t1
chr7.2 exon 18787223 18787300 18787223 ID=MS.gene014002.t1.exon7;Parent=MS.gene014002.t1
chr7.2 CDS 18787223 18787300 18787223 ID=cds.MS.gene014002.t1;Parent=MS.gene014002.t1
chr7.2 exon 18787420 18787471 18787420 ID=MS.gene014002.t1.exon8;Parent=MS.gene014002.t1
chr7.2 CDS 18787420 18787471 18787420 ID=cds.MS.gene014002.t1;Parent=MS.gene014002.t1
chr7.2 exon 18788013 18788284 18788013 ID=MS.gene014002.t1.exon9;Parent=MS.gene014002.t1
chr7.2 CDS 18788013 18788284 18788013 ID=cds.MS.gene014002.t1;Parent=MS.gene014002.t1
chr7.2 exon 18788429 18788677 18788429 ID=MS.gene014002.t1.exon10;Parent=MS.gene014002.t1
chr7.2 CDS 18788429 18788677 18788429 ID=cds.MS.gene014002.t1;Parent=MS.gene014002.t1
chr7.2 exon 18789060 18789206 18789060 ID=MS.gene014002.t1.exon11;Parent=MS.gene014002.t1
chr7.2 CDS 18789060 18789206 18789060 ID=cds.MS.gene014002.t1;Parent=MS.gene014002.t1
Gene Sequence

>MS.gene014002

ATGGGCAGTAGAGGTAGAACTGCTGAGGACACTAACAAGGTTGTTAACGGGATGCCGAGCTACGCACCTCCATCTAATAATTCCATGTAAATTTGTCTGAGGACCCTTTTGTTTAATGTTAATCTTACTCTTGATTGGTCTTGCTATTAATTTTAGGGGTAAAGTTTTGTTTAAATTTATTGTAGGTGCCTTTAGATGGTTTATATAGTCAATATAGTATTTTAGTATATGTGTTATGTAACTAGTAGAAATTATGCATGTTATTGGAGAGATATGATGTTGAATTGAAGTTAGGGTCTATTGGTTGCAGAGGAAAGTGTGTGGTGGAAATGATAAAAAGTGTTATATGTTGATTTTATTGTTTATTAATTATTGATAATTCTTAAATTTAGAGGAGATGAACAAAGTTTTAAATTGGGGATACTTACCTTGATATTGGAGAGAATTGCGGTCAAATGCTGTTGATGCTTTTATAGGAAAACATGAAAAAAATTGATGCCGTGGTGGCACAAATCACGGTCGCAGATCTAACTTTAAAACCCTGTAAAAATACTTCCGTTTACTTCATAGAACATAACGCGGCTAACTCGTCGTTCCTTGCTGACTCGAATTGTCAGTTTTTTCAGATTCTTCTAATTCTTGAAAGTTGAGACGATACAAACCTTATATGCTCTTTTCTTTTTGTGGCTTTACCTTTTCATAGAAGATTGCTATTGCTTTTCATGTTCATATGCTTCTTGCCGATTTGTTGTTAGATCTTGAGCATCCATGTTGGACCCTTTTTAGCTTTGAAACATGGATTTCATCATTGGCTGCATGTAGTTATGATTTATTCTTGAATATGCACCCAACATATGTTTAACATTTTGTCATGATTTTGGATTTCAGGGGCATGGAGGGAACTAATATTCATCCTTCTCGAATTTCTGATTTTGGAGCCCTTGAACAATCTCTAGGATTTCGTGTTGAGGATGCCATGAATCTTAGCAGAAGTATGTCATTTGGATCTCTAGCAGTTTTACCCCTTTTTTGTTGTTTTTTTTTGCTTTGCTGTGAACTTTTGTTTTATTAAGGGAAATGTTAACCAGTGCCCCCGGGGCACTGGTTAAGGAGTTAAATATAGAAGTATCTTGCATTGAAAGTTGTGTTGTCATTGCATTAAAAACTTAAAAAGTGTTCTTTTTGACTTAAAATTTCCACTTTTGGCTTCCTTAACCAGTGCCCCGGGGGCACTGGTTAACATGACCCTTTTATTAATTTAATATGCTGTCCTGTGTTCTTAGTGCTTATACTGTCACACTTGCATATCGTTAATCGTTGTGTATTAAAAACAGAAGATATCCAACTTGTTGCATTTGTTTGTAATTTGCTGCCAGAGAAGTCCTTAAAAAAGTAAATAATGATAGAAATACATGCTATTAGAATAGTTGTTCCCCTCTCGATGGAGCCTTATGAATCCTCGATTAACCTATTTATTTGTATATCATCTTTCAGATCCAGTGTTTAATCAAATGAAAGCAAATAGCCAAGCTTTAGGTGCTGATATTCAATTTGGTGCTTTAAGTAAGGTAAAATTGTATTCCAATAAAATCAATAAATTGCAAAAGTGTAAATGAATTTCTGAACCTTACACTCTTCACTTGCATGTATGTACGGTACAGTCCATTGCAAACTCGGATATAAACCTCTCTGCTGCAATTGCTGGGTCTCAGACATTGCAATTACAAAAAGACGCGCTGCCAAATTTGGCTTCAACATCTGGCGGCCATCGTGAGAATTGGGGAGAGTCCAACATGGCTGAGGGAAGCGCTGATACTTCAACAGATGATACAGAAGACAAGAATCAAATGGTGATTGCTTTACTTTAATCATACGGTTTATTCTGAATCTGGAATTTAATTTATTCAAACAGTCAAAAGCATGTTTTTTTCATACTCCAATAAAATAGCCATCTTCATTTTTGTTTTGCAGCCTGAAAGGGGGGAATCCAGTGAAAGATCAAAAGACAAATCGGATCAAAAGGTTATATAATGTAATTATATTCACATAAACATTAGCATTTGTTACCATATGTTAAATTTTGCTTTTGTTCAGACGTTAAGACGGCTGGCTCAAAATCGTGAAGCTGCCAGGAAAAGCCGACTGAGGAAAAAGGTACAGCCTTTTTCTGTTAAATTGTAAATGAACTTGTAAATTGTTTCTTCTGCATGCAATCTGGTTAGTAATTTTGTAAATTCTTCTTTCCATTCATTCAGGCATATGTGCAACAATTAGAGAGCAGCAGGCTGAAACTAACCCAACTAGAGCAAGAGCTACAGCGAGCACGCCAGCAGGTTTGTTTTGCTATTTTATTCACTATTCGTGATTCAAATTCTGATACTTATCTTTGTTGCTATTTCATTCTGGTTATGTTACTATGTTATTTGATGATTTGATTATTTATCTTTTCTAGGGAATATTTATTTCAAGTACTGGAGAGCAGACCCATTCAATGAGTGGAAATGGTATTTAATCTTCTTTTACCTCCAATTGTGTGACGCAAGCTTGAAATTTGTTAATTGCATCAAAGTCCCTTCTACTTGGAGGAATTTTTCGGTGACTTTTGAGTCTGATAACATTGAATTTAAAGCTGTGGCTATAGCCAATGCAAAATCCATTAACTCTTGGCTTGACAAATGCTCCATGACATTTGCCGTGATATGTTTCTTTTTTCATGAAAGAATCCAACATTTCCTTTAAAAATATCAAACCTCTTAACATATACAGATATTTCAACTTGTTCAATATGCTTGTTAGAACTTATTTTTAGTCGGTAAGTGCAAGCATGTGCTATGATTTTGAACTATAGTTTAACTTTTTATACATTGACAACAAATCACAACCATCATATGTGTGATTAAAGACAAATCTTTACGCTGACAGTGCATATGAACTAAATCATTTTCAACTATGAGAAAATAGTAGTCTGTAGCATGGATGGACAGACTTTTACTGTAGTGTGCTGTGTTTCAGAACCTAAATTGTGTTGACGTTTTTGGTGTGCAGGTGCAATGGCATTTGATGCAGAATACGCACGATGGTTAGAAGAGCATAATAGGCAAACCAATGAACTAAGGGCTGCAATAAATTCTCATGCTGGGGATATTGAACTCCGTACCATTGTCGACAATTTCATGACTCAATTTGAAGATATCTACAGGCTGAAAGGTGTTGCAGCAAAAGCTGATGTTTTCCACATTCTATCAGGAATGTGGAAGACTCCAGCTGAGAGGTGTTTCATGTGGATTGGAGGCTTTCGGTCATCTGAACTTCTTAAGGTGAGAAATTCCTCATTTGTTTATTCTCTATGGTTTGCATATTCATATATCTTGATAACGATTGATTAAGTGTTGGATTTTTAAGGTATATTTCTTTTTAGTCACGTTATTCGTACATCTAAAACTGGATTGACTCTGTTGCAGCTTCTTGTAAGTCATTTGGAGCCTTTAACTGAACAACAGTTGATGGGTATCTACAACTTGCAACAGTCATCTCAACAAGCTGAAGACGCTCTTTCCCAAGGAATGGACGCATTGCAGCAATCACTTTCCGAGACATTGGCTAATGGTTCACCCAACCCATCAGGTGCTTCTGGAAATGTGGCCAATTACATGGGACAAATGGCTATGGCCATGGGAAAGCTTGGTACTCTTGAGGGATTTCTTCGCCAGGTAATTAACTGTCTATTTCTTTATCTCAACTTCCTTCTTTTTGGAGGCGTGTCCGGTGTTCGACATGTGTGAGTGTCAGACACCGACACAGTTTCATTCAATAACATACTTTCCGTTGTTGTATACCGTGTATCCATTCCGTTGTCATGTTTATGTCTGTACTTAATTTGCTAAACTTGAAAATATAAACCAATAAAGTGATAAAGAGTATAAAAGAATTAATTGTGTACCTTAGAGGGTGAGATGCATTACAATTGAGCATAGATTTAATTAATGATACACGTGTATGACATATTGATTCATCAGAAGAATAAATAAAAGTAGTTACAACTTATAACACTTACCAATTCACTTTTGTTTTCCTTTTCCTTCATGTTTATAGGCTGATAACCTGAGGCAGCAAACGTTGCAACAAATGCTTCGGATATTAACAACCAGACAATCAGCTCGAGCTCTTCTCGCAATAAGTGATTATTTCTCCCGGCTGCGAGCTCTGAGTTCTCTATGGCTTGCACGGCCAAGGGAGTAA
Protein sequence

>MS.gene014002.t1

MGSRGRTAEDTNKVVNGMPSYAPPSNNSMGMEGTNIHPSRISDFGALEQSLGFRVEDAMNLSRNPVFNQMKANSQALGADIQFGALSKSIANSDINLSAAIAGSQTLQLQKDALPNLASTSGGHRENWGESNMAEGSADTSTDDTEDKNQMPERGESSERSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSTGEQTHSMSGNGAMAFDAEYARWLEEHNRQTNELRAAINSHAGDIELRTIVDNFMTQFEDIYRLKGVAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVSHLEPLTEQQLMGIYNLQQSSQQAEDALSQGMDALQQSLSETLANGSPNPSGASGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE