Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016556.t1 | XP_003627926.1 | 98.7 | 466 | 6 | 0 | 1 | 466 | 1 | 466 | 6.50E-224 | 786.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016556.t1 | Q6IVC2 | 64.1 | 454 | 153 | 6 | 18 | 466 | 24 | 472 | 1.3e-127 | 458.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016556.t1 | G7LGW2 | 98.7 | 466 | 6 | 0 | 1 | 466 | 1 | 466 | 4.7e-224 | 786.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene016556.t1 | TF | bZIP |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene017753 | MS.gene016556 | PPI |
MS.gene016556 | MS.gene014002 | PPI |
MS.gene016556 | MS.gene017753 | PPI |
MS.gene016556 | MS.gene61762 | PPI |
MS.gene016556 | MS.gene063783 | PPI |
MS.gene016556 | MS.gene38759 | PPI |
MS.gene016556 | MS.gene88455 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016556.t1 | MTR_8g040120 | 98.712 | 466 | 6 | 0 | 1 | 466 | 1 | 466 | 0.0 | 948 |
MS.gene016556.t1 | MTR_7g089800 | 67.591 | 469 | 132 | 9 | 1 | 466 | 1 | 452 | 0.0 | 589 |
MS.gene016556.t1 | MTR_7g089800 | 69.863 | 438 | 114 | 7 | 31 | 466 | 2 | 423 | 0.0 | 578 |
MS.gene016556.t1 | MTR_5g054900 | 68.858 | 289 | 88 | 2 | 179 | 466 | 66 | 353 | 2.79e-142 | 412 |
MS.gene016556.t1 | MTR_5g054900 | 68.858 | 289 | 88 | 2 | 179 | 466 | 147 | 434 | 1.80e-141 | 412 |
MS.gene016556.t1 | MTR_5g054900 | 68.166 | 289 | 86 | 3 | 179 | 466 | 66 | 349 | 3.43e-138 | 401 |
MS.gene016556.t1 | MTR_5g054900 | 68.166 | 289 | 86 | 3 | 179 | 466 | 177 | 460 | 5.35e-137 | 402 |
MS.gene016556.t1 | MTR_7g092750 | 56.891 | 341 | 133 | 6 | 134 | 465 | 26 | 361 | 2.97e-130 | 381 |
MS.gene016556.t1 | MTR_1g111310 | 59.155 | 355 | 115 | 6 | 135 | 466 | 360 | 707 | 4.27e-130 | 393 |
MS.gene016556.t1 | MTR_1g111310 | 60.119 | 336 | 114 | 5 | 135 | 460 | 1 | 326 | 2.82e-119 | 365 |
MS.gene016556.t1 | MTR_7g092750 | 56.891 | 341 | 133 | 6 | 134 | 465 | 127 | 462 | 6.39e-129 | 382 |
MS.gene016556.t1 | MTR_2g086420 | 63.194 | 288 | 96 | 3 | 179 | 466 | 191 | 468 | 1.47e-124 | 372 |
MS.gene016556.t1 | MTR_2g086420 | 63.194 | 288 | 96 | 3 | 179 | 466 | 192 | 469 | 1.65e-124 | 372 |
MS.gene016556.t1 | MTR_3g087940 | 56.575 | 327 | 124 | 4 | 150 | 466 | 43 | 361 | 3.97e-118 | 350 |
MS.gene016556.t1 | MTR_4g053250 | 58.419 | 291 | 102 | 3 | 179 | 466 | 187 | 461 | 4.56e-113 | 342 |
MS.gene016556.t1 | MTR_7g092750 | 51.613 | 341 | 125 | 7 | 134 | 465 | 127 | 436 | 1.09e-108 | 329 |
MS.gene016556.t1 | MTR_0126s0080 | 59.387 | 261 | 93 | 4 | 168 | 419 | 203 | 459 | 1.02e-103 | 317 |
MS.gene016556.t1 | MTR_8g091650 | 52.027 | 296 | 128 | 4 | 176 | 466 | 70 | 356 | 9.56e-95 | 290 |
MS.gene016556.t1 | MTR_8g091650 | 52.778 | 288 | 122 | 4 | 184 | 466 | 5 | 283 | 2.52e-94 | 286 |
MS.gene016556.t1 | MTR_8g091650 | 52.577 | 291 | 124 | 4 | 181 | 466 | 111 | 392 | 9.91e-94 | 289 |
MS.gene016556.t1 | MTR_3g073560 | 50.993 | 302 | 137 | 3 | 169 | 466 | 53 | 347 | 4.94e-92 | 291 |
MS.gene016556.t1 | MTR_5g060950 | 52.962 | 287 | 124 | 3 | 181 | 463 | 67 | 346 | 6.91e-92 | 283 |
MS.gene016556.t1 | MTR_3g044820 | 59.677 | 186 | 63 | 4 | 160 | 333 | 23 | 208 | 9.01e-74 | 231 |
MS.gene016556.t1 | MTR_1g111320 | 52.033 | 123 | 44 | 4 | 134 | 244 | 92 | 211 | 6.66e-27 | 108 |
MS.gene016556.t1 | MTR_1g090370 | 33.333 | 207 | 108 | 5 | 258 | 459 | 47 | 228 | 2.51e-23 | 98.6 |
MS.gene016556.t1 | MTR_8g094690 | 28.333 | 240 | 144 | 4 | 242 | 453 | 8 | 247 | 5.66e-18 | 84.3 |
MS.gene016556.t1 | MTR_7g068860 | 24.171 | 211 | 157 | 2 | 249 | 456 | 9 | 219 | 1.93e-12 | 67.0 |
MS.gene016556.t1 | MTR_2g076140 | 22.581 | 217 | 127 | 3 | 249 | 445 | 4 | 199 | 4.66e-12 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016556.t1 | AT3G12250 | 80.120 | 332 | 64 | 2 | 135 | 466 | 1 | 330 | 0.0 | 526 |
MS.gene016556.t1 | AT3G12250 | 80.120 | 332 | 64 | 2 | 135 | 466 | 1 | 330 | 0.0 | 526 |
MS.gene016556.t1 | AT3G12250 | 80.120 | 332 | 64 | 2 | 135 | 466 | 1 | 330 | 0.0 | 526 |
MS.gene016556.t1 | AT3G12250 | 80.120 | 332 | 64 | 2 | 135 | 466 | 1 | 330 | 0.0 | 526 |
MS.gene016556.t1 | AT3G12250 | 74.790 | 357 | 63 | 3 | 135 | 466 | 1 | 355 | 0.0 | 514 |
MS.gene016556.t1 | AT3G12250 | 82.237 | 304 | 53 | 1 | 163 | 466 | 1 | 303 | 1.20e-177 | 499 |
MS.gene016556.t1 | AT3G12250 | 82.237 | 304 | 53 | 1 | 163 | 466 | 22 | 324 | 1.26e-177 | 500 |
MS.gene016556.t1 | AT5G06950 | 75.510 | 343 | 60 | 3 | 135 | 466 | 1 | 330 | 1.60e-177 | 500 |
MS.gene016556.t1 | AT5G06950 | 75.510 | 343 | 60 | 3 | 135 | 466 | 1 | 330 | 1.60e-177 | 500 |
MS.gene016556.t1 | AT5G06950 | 75.510 | 343 | 60 | 3 | 135 | 466 | 1 | 330 | 1.60e-177 | 500 |
MS.gene016556.t1 | AT5G06950 | 75.510 | 343 | 60 | 3 | 135 | 466 | 1 | 330 | 1.60e-177 | 500 |
MS.gene016556.t1 | AT5G06950 | 75.510 | 343 | 60 | 3 | 135 | 466 | 1 | 330 | 1.60e-177 | 500 |
MS.gene016556.t1 | AT5G06960 | 77.410 | 332 | 73 | 2 | 135 | 466 | 1 | 330 | 4.08e-173 | 489 |
MS.gene016556.t1 | AT5G06960 | 77.410 | 332 | 73 | 2 | 135 | 466 | 1 | 330 | 4.08e-173 | 489 |
MS.gene016556.t1 | AT5G06960 | 80.208 | 288 | 56 | 1 | 179 | 466 | 24 | 310 | 4.96e-162 | 460 |
MS.gene016556.t1 | AT1G68640 | 70.238 | 336 | 95 | 4 | 134 | 466 | 119 | 452 | 3.15e-145 | 423 |
MS.gene016556.t1 | AT1G08320 | 64.583 | 288 | 92 | 2 | 179 | 466 | 52 | 329 | 6.73e-131 | 383 |
MS.gene016556.t1 | AT1G08320 | 64.583 | 288 | 92 | 2 | 179 | 466 | 52 | 329 | 6.73e-131 | 383 |
MS.gene016556.t1 | AT1G08320 | 64.583 | 288 | 92 | 2 | 179 | 466 | 176 | 453 | 1.12e-129 | 384 |
MS.gene016556.t1 | AT1G08320 | 64.583 | 288 | 92 | 2 | 179 | 466 | 176 | 453 | 1.12e-129 | 384 |
MS.gene016556.t1 | AT1G08320 | 64.583 | 288 | 92 | 2 | 179 | 466 | 176 | 453 | 1.12e-129 | 384 |
MS.gene016556.t1 | AT5G06839 | 61.022 | 313 | 108 | 4 | 167 | 465 | 103 | 415 | 1.69e-127 | 376 |
MS.gene016556.t1 | AT5G06839 | 61.022 | 313 | 107 | 5 | 167 | 465 | 103 | 414 | 4.06e-127 | 375 |
MS.gene016556.t1 | AT5G06839 | 61.022 | 313 | 107 | 5 | 167 | 465 | 146 | 457 | 6.96e-127 | 376 |
MS.gene016556.t1 | AT1G22070 | 54.328 | 335 | 139 | 4 | 136 | 466 | 58 | 382 | 6.51e-115 | 343 |
MS.gene016556.t1 | AT5G10030 | 58.054 | 298 | 112 | 3 | 174 | 466 | 73 | 362 | 1.91e-113 | 338 |
MS.gene016556.t1 | AT5G10030 | 58.054 | 298 | 112 | 3 | 174 | 466 | 73 | 362 | 1.91e-113 | 338 |
MS.gene016556.t1 | AT5G10030 | 58.054 | 298 | 112 | 3 | 174 | 466 | 73 | 362 | 1.91e-113 | 338 |
MS.gene016556.t1 | AT5G10030 | 58.054 | 298 | 112 | 3 | 174 | 466 | 73 | 362 | 1.91e-113 | 338 |
MS.gene016556.t1 | AT5G10030 | 58.054 | 298 | 112 | 3 | 174 | 466 | 73 | 362 | 1.91e-113 | 338 |
MS.gene016556.t1 | AT1G77920 | 53.666 | 341 | 135 | 5 | 137 | 466 | 38 | 366 | 2.07e-111 | 333 |
MS.gene016556.t1 | AT5G65210 | 50.838 | 358 | 148 | 7 | 128 | 466 | 18 | 366 | 1.70e-108 | 326 |
MS.gene016556.t1 | AT5G65210 | 50.838 | 358 | 148 | 7 | 128 | 466 | 18 | 366 | 1.70e-108 | 326 |
MS.gene016556.t1 | AT5G65210 | 50.838 | 358 | 148 | 7 | 128 | 466 | 18 | 366 | 1.70e-108 | 326 |
MS.gene016556.t1 | AT5G65210 | 50.838 | 358 | 148 | 7 | 128 | 466 | 18 | 366 | 1.70e-108 | 326 |
MS.gene016556.t1 | AT5G65210 | 50.838 | 358 | 148 | 7 | 128 | 466 | 18 | 366 | 1.70e-108 | 326 |
MS.gene016556.t1 | AT5G65210 | 50.838 | 358 | 148 | 7 | 128 | 466 | 18 | 366 | 1.70e-108 | 326 |
MS.gene016556.t1 | AT5G65210 | 56.376 | 298 | 117 | 3 | 174 | 466 | 7 | 296 | 1.93e-108 | 323 |
MS.gene016556.t1 | AT3G14880 | 22.791 | 215 | 124 | 3 | 256 | 445 | 17 | 214 | 4.82e-12 | 66.2 |
MS.gene016556.t1 | AT1G58330 | 25.116 | 215 | 153 | 4 | 249 | 456 | 10 | 223 | 6.72e-12 | 65.5 |
MS.gene016556.t1 | AT3G14880 | 24.390 | 205 | 140 | 3 | 256 | 445 | 17 | 221 | 3.58e-11 | 63.5 |
Find 126 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTGTATGAACACTTAATA+TGG | 0.220209 | 8.2:+60429651 | None:intergenic |
CTGCTGAAAGGTGTTTCTTA+TGG | 0.270813 | 8.2:-60427065 | MS.gene016556:CDS |
AACGACTACTTTCCAATTGT+TGG | 0.295766 | 8.2:+60428078 | None:intergenic |
CGGCCATGGCAAATTCTTCC+TGG | 0.301627 | 8.2:+60429626 | None:intergenic |
CAATGCATCTTCTGCTTGTT+GGG | 0.319617 | 8.2:+60426596 | None:intergenic |
ACTACAATCATTTAATCTCT+TGG | 0.339226 | 8.2:+60426019 | None:intergenic |
GGCTCTGCTTGGTTCGTCAA+TGG | 0.351770 | 8.2:+60429724 | None:intergenic |
AATCAATCCCTTGCTGTTGC+GGG | 0.351965 | 8.2:-60429097 | MS.gene016556:CDS |
TAGTCAACCATATCGCTTAG+AGG | 0.358339 | 8.2:-60430577 | MS.gene016556:CDS |
GCATTTGTTGTAGTGTTTGC+TGG | 0.361748 | 8.2:+60426140 | None:intergenic |
ACCTTCCTCATCTGGTTCCT+CGG | 0.368179 | 8.2:-60426517 | MS.gene016556:CDS |
GCTGAAGCTCTTGCTCTAGT+TGG | 0.368756 | 8.2:+60428045 | None:intergenic |
ACAGCTTCTGGTAAATCAAT+TGG | 0.378865 | 8.2:-60426670 | MS.gene016556:intron |
TCAAGAGAACTGGTGTGAAC+AGG | 0.383523 | 8.2:+60429886 | None:intergenic |
CCTTCCTCATCTGGTTCCTC+GGG | 0.387610 | 8.2:-60426516 | MS.gene016556:CDS |
TCCTTACTTTCTTTCTCAAT+CGG | 0.389088 | 8.2:+60428889 | None:intergenic |
ACTGGTGCACCTTCCTCATC+TGG | 0.390580 | 8.2:-60426525 | MS.gene016556:CDS |
CAGGGCCAGGAGAAATTGTT+TGG | 0.403898 | 8.2:+60429905 | None:intergenic |
GCTCTGCTTGGTTCGTCAAT+GGG | 0.405147 | 8.2:+60429725 | None:intergenic |
ATAGGCCTATGTCCAACAAT+TGG | 0.407086 | 8.2:-60428090 | MS.gene016556:intron |
ACAATGCATCTTCTGCTTGT+TGG | 0.407137 | 8.2:+60426595 | None:intergenic |
ACACATTCACTGAGTGGAAA+TGG | 0.409133 | 8.2:-60427837 | MS.gene016556:intron |
AGCAAGAGCTTCAGCGAGCC+AGG | 0.410136 | 8.2:-60428037 | MS.gene016556:CDS |
TCCACATGCCAGACAACAAA+TGG | 0.411800 | 8.2:+60427094 | None:intergenic |
ATTGTCGTGTTGTCAATATT+CGG | 0.418451 | 8.2:+60426116 | None:intergenic |
CTTAATATGGTACCGCTACC+TGG | 0.419828 | 8.2:+60429664 | None:intergenic |
CGCTCTCAGCTCTCTCTGGT+TGG | 0.422468 | 8.2:-60426047 | MS.gene016556:CDS |
AGCAGAAGATGCATTGTCTC+AGG | 0.422669 | 8.2:-60426589 | MS.gene016556:CDS |
TCTCACTGAGCAGCAGTTGA+TGG | 0.427305 | 8.2:-60426643 | MS.gene016556:CDS |
TCACACCAGTTCTCTTGATA+AGG | 0.429903 | 8.2:-60429881 | MS.gene016556:intron |
ACAGCATCCTCTAAGCGATA+TGG | 0.434154 | 8.2:+60430570 | None:intergenic |
AATATTGACAACACGACAAT+CGG | 0.436484 | 8.2:-60426113 | MS.gene016556:CDS |
GCTTCAGCGAGCCAGGCAAC+AGG | 0.437362 | 8.2:-60428030 | MS.gene016556:intron |
TGCGCGCTCTCAGCTCTCTC+TGG | 0.437796 | 8.2:-60426051 | MS.gene016556:CDS |
TTTAACTCACTTAAAGTAAG+TGG | 0.445667 | 8.2:-60429928 | MS.gene016556:CDS |
CTGAAGCTCTTGCTCTAGTT+GGG | 0.454588 | 8.2:+60428046 | None:intergenic |
GAACTTCGCATGATTGTTGA+TGG | 0.456225 | 8.2:-60427180 | MS.gene016556:CDS |
ACTCACCTTATCAAGAGAAC+TGG | 0.460871 | 8.2:+60429876 | None:intergenic |
TTTATCCTTTGATCTGTCAC+TGG | 0.461119 | 8.2:+60429066 | None:intergenic |
GGCAAATTACATGGGTCAAA+TGG | 0.469208 | 8.2:-60426487 | MS.gene016556:CDS |
ATCAACAATCATGCGAAGTT+CGG | 0.473485 | 8.2:+60427182 | None:intergenic |
GATGAGAAGGGAGCAGAAAG+AGG | 0.473605 | 8.2:-60431840 | MS.gene016556:CDS |
GGGGAATGTGGCAAATTACA+TGG | 0.473681 | 8.2:-60426496 | MS.gene016556:CDS |
GAAAGGTGTTTCTTATGGCT+TGG | 0.475014 | 8.2:-60427060 | MS.gene016556:CDS |
GGGTCAAATGGCTATGGCCA+TGG | 0.476020 | 8.2:-60426475 | MS.gene016556:CDS |
AGTTGGTGTTGAAGATGAGA+AGG | 0.478818 | 8.2:-60431853 | MS.gene016556:CDS |
AAATCAATCCCTTGCTGTTG+CGG | 0.481055 | 8.2:-60429098 | MS.gene016556:CDS |
GAACTGGTGTGAACAGGGCC+AGG | 0.486580 | 8.2:+60429892 | None:intergenic |
GCAACCTATGTGGCTCTGCT+TGG | 0.486642 | 8.2:+60429713 | None:intergenic |
GCTATGGCCATGGGTAAACT+TGG | 0.487827 | 8.2:-60426465 | MS.gene016556:CDS |
GCTGAAAGGTGTTGCAGCTA+AGG | 0.488277 | 8.2:-60427127 | MS.gene016556:CDS |
TGCAGAATATGCAAGGTGGC+TGG | 0.488727 | 8.2:-60427265 | MS.gene016556:CDS |
AGATGCATTGTCTCAGGGTA+TGG | 0.491210 | 8.2:-60426583 | MS.gene016556:CDS |
CCATGGCCGATGCCAGTCCT+AGG | 0.497921 | 8.2:-60429612 | MS.gene016556:CDS |
TCGGTCATCTGAACTTCTCA+AGG | 0.499364 | 8.2:-60427031 | MS.gene016556:intron |
ATGAGAAGGGAGCAGAAAGA+GGG | 0.507949 | 8.2:-60431839 | MS.gene016556:CDS |
CACCCGCTGATTCTTGTCAT+CGG | 0.514566 | 8.2:+60429564 | None:intergenic |
TCTGTCGAAATATCAGTCCT+AGG | 0.517561 | 8.2:+60429595 | None:intergenic |
ATCTGGTTCCTCGGGGAATG+TGG | 0.518894 | 8.2:-60426508 | MS.gene016556:CDS |
GCTTCAATTCCGACGATGCA+TGG | 0.521925 | 8.2:-60431809 | MS.gene016556:intron |
GGGAGTCTTCATATCAAGCT+CGG | 0.529762 | 8.2:-60427868 | MS.gene016556:CDS |
CCTAGGACTGGCATCGGCCA+TGG | 0.532193 | 8.2:+60429612 | None:intergenic |
CTTGCAGAGACGTTGTCCAC+TGG | 0.532862 | 8.2:-60426543 | MS.gene016556:CDS |
CTCACTGAGCAGCAGTTGAT+GGG | 0.536958 | 8.2:-60426642 | MS.gene016556:CDS |
AGGACTGATATTTCGACAGA+TGG | 0.538631 | 8.2:-60429592 | MS.gene016556:CDS |
TTTGTTAATTGCAACCTATG+TGG | 0.539225 | 8.2:+60429703 | None:intergenic |
TCCATTTGTTGTCTGGCATG+TGG | 0.541899 | 8.2:-60427095 | MS.gene016556:CDS |
GAACACTCGAGGGCTTCATT+CGG | 0.542555 | 8.2:-60426443 | MS.gene016556:CDS |
ACTTTCCAATTGTTGGACAT+AGG | 0.549896 | 8.2:+60428085 | None:intergenic |
AAAGGATAAATCAGATCAGA+AGG | 0.550838 | 8.2:-60429053 | MS.gene016556:intron |
TGCATCTTCTGCTTGTTGGG+AGG | 0.551942 | 8.2:+60426599 | None:intergenic |
GGTCAAATGGCTATGGCCAT+GGG | 0.552555 | 8.2:-60426474 | MS.gene016556:CDS |
ATCAGTCCTAGGACTGGCAT+CGG | 0.552732 | 8.2:+60429606 | None:intergenic |
GGAGTCTTCATATCAAGCTC+GGG | 0.556167 | 8.2:-60427867 | MS.gene016556:CDS |
CGAAATATCAGTCCTAGGAC+TGG | 0.557940 | 8.2:+60429600 | None:intergenic |
AGGTGTTTCTTATGGCTTGG+TGG | 0.558392 | 8.2:-60427057 | MS.gene016556:CDS |
CATAAGAAACACCTTTCAGC+AGG | 0.562302 | 8.2:+60427066 | None:intergenic |
AAGCTTCAATCATCAAATCC+AGG | 0.562366 | 8.2:-60429682 | MS.gene016556:CDS |
CGAACCAAGCAGAGCCACAT+AGG | 0.562908 | 8.2:-60429717 | MS.gene016556:CDS |
GTCAGAACCCGCAACAGCAA+GGG | 0.563883 | 8.2:+60429090 | None:intergenic |
TTACATGGGTCAAATGGCTA+TGG | 0.565231 | 8.2:-60426481 | MS.gene016556:CDS |
CACGATTCTGAGCGAGCCTG+CGG | 0.566544 | 8.2:+60428928 | None:intergenic |
ACTGAATCTAACCTGTTGCC+TGG | 0.566777 | 8.2:+60428019 | None:intergenic |
ACTCGAGGGCTTCATTCGGC+AGG | 0.567994 | 8.2:-60426439 | MS.gene016556:intron |
AGTGGCCAAACAATTTCTCC+TGG | 0.570700 | 8.2:-60429910 | MS.gene016556:CDS |
CAAGAGAACTGGTGTGAACA+GGG | 0.573772 | 8.2:+60429887 | None:intergenic |
ATGGATTTCAGCTATACAGA+TGG | 0.574550 | 8.2:-60430642 | MS.gene016556:intron |
TTGGGAGGATTGTTGCAAGT+TGG | 0.576668 | 8.2:+60426614 | None:intergenic |
CAGTGGACAACGTCTCTGCA+AGG | 0.586648 | 8.2:+60426544 | None:intergenic |
ATCAACTGCTGCTCAGTGAG+AGG | 0.591227 | 8.2:+60426645 | None:intergenic |
AAAAGTAATCATGGATGGCA+AGG | 0.591430 | 8.2:+60426080 | None:intergenic |
GCAGCCGTGAAAAGTAATCA+TGG | 0.591691 | 8.2:+60426071 | None:intergenic |
GAGGATGCTGTTGTTCTGAG+TGG | 0.593981 | 8.2:-60430558 | MS.gene016556:CDS |
TATTATTGTAGACTCTCCGC+AGG | 0.596692 | 8.2:-60428944 | MS.gene016556:intron |
CAATCATCAAATCCAGGTAG+CGG | 0.596748 | 8.2:-60429676 | MS.gene016556:CDS |
CCGTGAAAAGTAATCATGGA+TGG | 0.597749 | 8.2:+60426075 | None:intergenic |
CACCGATGACAAGAATCAGC+GGG | 0.600003 | 8.2:-60429566 | MS.gene016556:intron |
GAGTGTTCCAAGTTTACCCA+TGG | 0.600742 | 8.2:+60426458 | None:intergenic |
TGACTCCAGTGACAGATCAA+AGG | 0.603790 | 8.2:-60429071 | MS.gene016556:CDS |
AGTGGACAACGTCTCTGCAA+GGG | 0.605477 | 8.2:+60426545 | None:intergenic |
AAGTGTTCATACAGAAAACC+AGG | 0.608836 | 8.2:-60429644 | MS.gene016556:CDS |
ATTCCCCGAGGAACCAGATG+AGG | 0.609365 | 8.2:+60426512 | None:intergenic |
GCAGAAGATGCATTGTCTCA+GGG | 0.610171 | 8.2:-60426588 | MS.gene016556:CDS |
CATGATTGTTGATGGTGTAG+TGG | 0.611316 | 8.2:-60427172 | MS.gene016556:CDS |
TGGATTTCAGCTATACAGAT+GGG | 0.613061 | 8.2:-60430641 | MS.gene016556:intron |
AGTCAGAACCCGCAACAGCA+AGG | 0.613696 | 8.2:+60429089 | None:intergenic |
AGATGAGGAAGGTGCACCAG+TGG | 0.616659 | 8.2:+60426527 | None:intergenic |
GTTGGTGTTGAAGATGAGAA+GGG | 0.617547 | 8.2:-60431852 | MS.gene016556:CDS |
AGAAATATACCATGCATCGT+CGG | 0.626352 | 8.2:+60431800 | None:intergenic |
GGTAAACTTGGAACACTCGA+GGG | 0.626928 | 8.2:-60426453 | MS.gene016556:CDS |
GCATCGTCGGAATTGAAGCT+CGG | 0.633427 | 8.2:+60431813 | None:intergenic |
TGTGGAAAACACCTGCTGAA+AGG | 0.636597 | 8.2:-60427077 | MS.gene016556:CDS |
GGGTAAACTTGGAACACTCG+AGG | 0.640334 | 8.2:-60426454 | MS.gene016556:CDS |
ATGGGAAGTAGAATCAGAGT+TGG | 0.641548 | 8.2:-60431870 | MS.gene016556:CDS |
CCCGAGGAACCAGATGAGGA+AGG | 0.644618 | 8.2:+60426516 | None:intergenic |
CAGGCTCGCTCAGAATCGTG+AGG | 0.649410 | 8.2:-60428925 | MS.gene016556:CDS |
AAACCAGGAAGAATTTGCCA+TGG | 0.653768 | 8.2:-60429629 | MS.gene016556:CDS |
AATTCGATGCAGAATATGCA+AGG | 0.654839 | 8.2:-60427272 | MS.gene016556:CDS |
TCTGATTATAGATTCAAACT+CGG | 0.655868 | 8.2:-60429953 | MS.gene016556:intron |
GGGAATGTGGCAAATTACAT+GGG | 0.666390 | 8.2:-60426495 | MS.gene016556:CDS |
CTTCCTCATCTGGTTCCTCG+GGG | 0.671637 | 8.2:-60426515 | MS.gene016556:CDS |
GAACAAACACATTCACTGAG+TGG | 0.681277 | 8.2:-60427843 | MS.gene016556:CDS |
ACACCGATGACAAGAATCAG+CGG | 0.687622 | 8.2:-60429567 | MS.gene016556:CDS |
GCTCGCTCAGAATCGTGAGG+CGG | 0.692281 | 8.2:-60428922 | MS.gene016556:CDS |
GTAATTTGCCACATTCCCCG+AGG | 0.720922 | 8.2:+60426500 | None:intergenic |
TCGATGCAGAATATGCAAGG+TGG | 0.769831 | 8.2:-60427269 | MS.gene016556:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTAAAAAAAGAATAGTAA+AGG | - | chr8.2:60431069-60431088 | MS.gene016556:intron | 10.0% |
!! | TATTATAAAATATCTTACTA+TGG | - | chr8.2:60431697-60431716 | MS.gene016556:intron | 10.0% |
!!! | ATAGTAAGATATTTTATAAT+AGG | + | chr8.2:60431698-60431717 | None:intergenic | 10.0% |
!!! | GAAAATTGATTTAAATAAAT+TGG | + | chr8.2:60429665-60429684 | None:intergenic | 10.0% |
!!! | TAGTAAGATATTTTATAATA+GGG | + | chr8.2:60431697-60431716 | None:intergenic | 10.0% |
!!! | TTACCATTTTTTAAATAAAT+TGG | - | chr8.2:60427511-60427530 | MS.gene016556:intron | 10.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8.2:60429279-60429298 | MS.gene016556:intron | 100.0% |
!! | AAACTTGTGTTTAATTAATT+TGG | - | chr8.2:60431500-60431519 | MS.gene016556:intron | 15.0% |
!! | ATATTAACAAATTTATTGCA+TGG | - | chr8.2:60428876-60428895 | MS.gene016556:intron | 15.0% |
!! | ATCAAAATATATGACATAAT+TGG | - | chr8.2:60426969-60426988 | MS.gene016556:intron | 15.0% |
!! | GTTCCAATTTATTTAAAAAA+TGG | + | chr8.2:60427517-60427536 | None:intergenic | 15.0% |
!! | TCAAAATATATGACATAATT+GGG | - | chr8.2:60426970-60426989 | MS.gene016556:intron | 15.0% |
!! | TTAAAGATAATAAATATGGT+TGG | + | chr8.2:60429565-60429584 | None:intergenic | 15.0% |
!!! | TAATTTTTTACAACTATCAT+AGG | + | chr8.2:60429728-60429747 | None:intergenic | 15.0% |
!!! | TGATTTAAATAAATTGGTTT+TGG | + | chr8.2:60429659-60429678 | None:intergenic | 15.0% |
!!! | TTTAACTTTCTTATATCTTT+TGG | - | chr8.2:60426513-60426532 | MS.gene016556:CDS | 15.0% |
!! | AACAGAAACAAATTATACTA+TGG | + | chr8.2:60430527-60430546 | None:intergenic | 20.0% |
!! | AATAAATTGGAACTATACAA+TGG | - | chr8.2:60427524-60427543 | MS.gene016556:intron | 20.0% |
!! | ACACAATTAAATGATTGTTA+TGG | + | chr8.2:60430594-60430613 | None:intergenic | 20.0% |
!! | ACATGATAACAACATTTATA+TGG | + | chr8.2:60429102-60429121 | None:intergenic | 20.0% |
!! | ATGATAACAACATTTATATG+GGG | + | chr8.2:60429100-60429119 | None:intergenic | 20.0% |
!! | ATGTTATCATTTAAACAAGA+AGG | + | chr8.2:60428391-60428410 | None:intergenic | 20.0% |
!! | CATGATAACAACATTTATAT+GGG | + | chr8.2:60429101-60429120 | None:intergenic | 20.0% |
!! | TGTTATCATTTAAACAAGAA+GGG | + | chr8.2:60428390-60428409 | None:intergenic | 20.0% |
!! | TTCAAAATAAGTCAAAGATT+CGG | + | chr8.2:60430986-60431005 | None:intergenic | 20.0% |
!!! | AAACTATGTTACTTATTCTT+TGG | - | chr8.2:60430098-60430117 | MS.gene016556:intron | 20.0% |
!!! | AACAAGTTTTATGAGATTAT+TGG | + | chr8.2:60427459-60427478 | None:intergenic | 20.0% |
!!! | ATGTTAAATAGCTTTTCTAA+AGG | + | chr8.2:60426916-60426935 | None:intergenic | 20.0% |
!!! | CATAGTATATTCATTTTCAT+AGG | - | chr8.2:60429792-60429811 | MS.gene016556:intron | 20.0% |
!!! | CATTTTAAATGTATCATCAA+GGG | + | chr8.2:60426194-60426213 | None:intergenic | 20.0% |
!!! | TAAATTTGTTGATCGAAATT+TGG | - | chr8.2:60427077-60427096 | MS.gene016556:CDS | 20.0% |
!!! | TCATTTTAAATGTATCATCA+AGG | + | chr8.2:60426195-60426214 | None:intergenic | 20.0% |
!!! | TTTTAGATTGCAAGTTTTTT+TGG | - | chr8.2:60426143-60426162 | MS.gene016556:CDS | 20.0% |
!!! | TTTTCATATAAGATGTAAGT+CGG | + | chr8.2:60426490-60426509 | None:intergenic | 20.0% |
! | AAAATTCATTAGCAAAGGAA+AGG | + | chr8.2:60427927-60427946 | None:intergenic | 25.0% |
! | AAACATGCATTAAACATTAC+AGG | + | chr8.2:60429402-60429421 | None:intergenic | 25.0% |
! | AAAGATAGACAATGATATCT+AGG | + | chr8.2:60427866-60427885 | None:intergenic | 25.0% |
! | AAATTCATAACCTAAAGTGT+CGG | + | chr8.2:60431583-60431602 | None:intergenic | 25.0% |
! | AAGATAATAAATATGGTTGG+AGG | + | chr8.2:60429562-60429581 | None:intergenic | 25.0% |
! | AAGCCCTAAATCTAAATTTA+GGG | + | chr8.2:60426370-60426389 | None:intergenic | 25.0% |
! | AATGTAAAGTGATCTATGAT+TGG | + | chr8.2:60429622-60429641 | None:intergenic | 25.0% |
! | AATGTGATCCATATTGAAAA+GGG | + | chr8.2:60430909-60430928 | None:intergenic | 25.0% |
! | ACAGGAAAATGATTAAAATG+TGG | - | chr8.2:60430427-60430446 | MS.gene016556:intron | 25.0% |
! | ACTTGTGTTTGATTAAATGA+TGG | + | chr8.2:60429689-60429708 | None:intergenic | 25.0% |
! | AGAGAAAAATTGCACAAAAA+CGG | + | chr8.2:60427197-60427216 | None:intergenic | 25.0% |
! | AGAGTCTACAATAATATTGA+AGG | + | chr8.2:60428952-60428971 | None:intergenic | 25.0% |
! | AGTTGTGAAATGTAGATTTA+GGG | - | chr8.2:60426321-60426340 | MS.gene016556:intron | 25.0% |
! | AGTTTGTACAAAAAGCTATT+CGG | - | chr8.2:60429156-60429175 | MS.gene016556:intron | 25.0% |
! | ATCCTAATTCTGACAAAATA+TGG | - | chr8.2:60427239-60427258 | MS.gene016556:CDS | 25.0% |
! | ATTATGTCTAATAGTCTATC+TGG | - | chr8.2:60430124-60430143 | MS.gene016556:intron | 25.0% |
! | CAATCATTTAATTGTGTTTC+AGG | - | chr8.2:60430597-60430616 | MS.gene016556:CDS | 25.0% |
! | CTAAAATGAAATGTACGATT+TGG | - | chr8.2:60427215-60427234 | MS.gene016556:CDS | 25.0% |
! | GAAAAGCTATTTAACATACA+AGG | - | chr8.2:60426919-60426938 | MS.gene016556:intron | 25.0% |
! | GAAAATGAATATACTATGTC+AGG | + | chr8.2:60429790-60429809 | None:intergenic | 25.0% |
! | GCCTTCAAAATATTAAAACT+CGG | + | chr8.2:60431151-60431170 | None:intergenic | 25.0% |
! | GTTACGTAAGTTTATAAACA+GGG | - | chr8.2:60428624-60428643 | MS.gene016556:intron | 25.0% |
! | TAGTTGTGAAATGTAGATTT+AGG | - | chr8.2:60426320-60426339 | MS.gene016556:intron | 25.0% |
! | TCAAAATAAGTCAAAGATTC+GGG | + | chr8.2:60430985-60431004 | None:intergenic | 25.0% |
! | TCAGAAAAATTCATTAGCAA+AGG | + | chr8.2:60427932-60427951 | None:intergenic | 25.0% |
! | TCTGATTATAGATTCAAACT+CGG | - | chr8.2:60427947-60427966 | MS.gene016556:intron | 25.0% |
! | TGTTACGTAAGTTTATAAAC+AGG | - | chr8.2:60428623-60428642 | MS.gene016556:intron | 25.0% |
! | TTAAGAACAAGAACTTTCTT+TGG | - | chr8.2:60431025-60431044 | MS.gene016556:intron | 25.0% |
! | TTCTGTATGAACACTTAATA+TGG | + | chr8.2:60428252-60428271 | None:intergenic | 25.0% |
! | TTGCCCTAAATTTAGATTTA+GGG | - | chr8.2:60426364-60426383 | MS.gene016556:intron | 25.0% |
! | TTTAACTCACTTAAAGTAAG+TGG | - | chr8.2:60427972-60427991 | MS.gene016556:intron | 25.0% |
!! | AATTTCTTGTTTCTTCTTGT+AGG | - | chr8.2:60430011-60430030 | MS.gene016556:intron | 25.0% |
!! | ACAATTACTTGTTGATTACT+TGG | - | chr8.2:60427571-60427590 | MS.gene016556:intron | 25.0% |
!! | ATCCATATTTTGTCAGAATT+AGG | + | chr8.2:60427244-60427263 | None:intergenic | 25.0% |
!! | ATTAATTTGGTACATTTGCA+TGG | - | chr8.2:60431513-60431532 | MS.gene016556:intron | 25.0% |
!! | ATTTCTGTGTATTTGTTACA+AGG | - | chr8.2:60431724-60431743 | MS.gene016556:intron | 25.0% |
!! | ATTTCTTGTTTCTTCTTGTA+GGG | - | chr8.2:60430012-60430031 | MS.gene016556:intron | 25.0% |
!! | CACATTATGATGAGATTTTT+AGG | - | chr8.2:60430751-60430770 | MS.gene016556:intron | 25.0% |
!! | CATGTTTGAATTATTTTCGA+GGG | - | chr8.2:60429415-60429434 | MS.gene016556:intron | 25.0% |
!!! | AAGCCAATAATTTTAACATG+AGG | - | chr8.2:60429258-60429277 | MS.gene016556:intron | 25.0% |
!!! | AATTTTCATGTTTCTGACTT+TGG | - | chr8.2:60427294-60427313 | MS.gene016556:intron | 25.0% |
!!! | ACCGAGTTTTAATATTTTGA+AGG | - | chr8.2:60431147-60431166 | MS.gene016556:intron | 25.0% |
!!! | AGCCAATAATTTTAACATGA+GGG | - | chr8.2:60429259-60429278 | MS.gene016556:intron | 25.0% |
!!! | ATGTTGAAGTTTTAGCATTA+CGG | - | chr8.2:60428091-60428110 | MS.gene016556:intron | 25.0% |
!!! | CAAGGAAATGTTTTATTTTG+AGG | - | chr8.2:60426937-60426956 | MS.gene016556:intron | 25.0% |
!!! | CTTATTTTGCATAAATCTCT+AGG | - | chr8.2:60426451-60426470 | MS.gene016556:CDS | 25.0% |
!!! | GAAAAGGTTTTGTTACTAAT+AGG | - | chr8.2:60427051-60427070 | MS.gene016556:CDS | 25.0% |
!!! | GTTTTATTTTGAGGAGTATA+TGG | - | chr8.2:60426946-60426965 | MS.gene016556:intron | 25.0% |
AAAGGATAAATCAGATCAGA+AGG | - | chr8.2:60428847-60428866 | MS.gene016556:intron | 30.0% | |
AACACAAGTGTATACTTCTT+TGG | - | chr8.2:60429700-60429719 | MS.gene016556:CDS | 30.0% | |
AAGTGCTTATGTATAAGCTA+CGG | + | chr8.2:60428650-60428669 | None:intergenic | 30.0% | |
AATAATTGTCATAGTCCAGT+TGG | + | chr8.2:60426664-60426683 | None:intergenic | 30.0% | |
AATATTGACAACACGACAAT+CGG | - | chr8.2:60431787-60431806 | MS.gene016556:intron | 30.0% | |
AATGAACCACCATTTATGAA+AGG | - | chr8.2:60430399-60430418 | MS.gene016556:intron | 30.0% | |
ACTTGGCAAAGATAATGTTA+AGG | - | chr8.2:60427588-60427607 | MS.gene016556:intron | 30.0% | |
ATGAACCACCATTTATGAAA+GGG | - | chr8.2:60430400-60430419 | MS.gene016556:intron | 30.0% | |
ATTGTATAGTATGTAACGTG+GGG | - | chr8.2:60426869-60426888 | MS.gene016556:intron | 30.0% | |
ATTGTCGTGTTGTCAATATT+CGG | + | chr8.2:60431787-60431806 | None:intergenic | 30.0% | |
CAAAATAAGTCAAAGATTCG+GGG | + | chr8.2:60430984-60431003 | None:intergenic | 30.0% | |
CAAGAAGAAACAAGAAATTC+AGG | + | chr8.2:60430010-60430029 | None:intergenic | 30.0% | |
CAAGCCCTAAATCTAAATTT+AGG | + | chr8.2:60426371-60426390 | None:intergenic | 30.0% | |
CAATGCTACTCATCTTATTA+AGG | + | chr8.2:60428728-60428747 | None:intergenic | 30.0% | |
CATCTTATTAAGGCTCTATT+TGG | + | chr8.2:60428718-60428737 | None:intergenic | 30.0% | |
CATGAAATAGTGAAAACACA+AGG | + | chr8.2:60431662-60431681 | None:intergenic | 30.0% | |
CATTGTATAGTATGTAACGT+GGG | - | chr8.2:60426868-60426887 | MS.gene016556:intron | 30.0% | |
GAATGTGATCCATATTGAAA+AGG | + | chr8.2:60430910-60430929 | None:intergenic | 30.0% | |
GATAAGGTTTAACCTAGAAT+GGG | + | chr8.2:60426811-60426830 | None:intergenic | 30.0% | |
GTTGCCCTAAATTTAGATTT+AGG | - | chr8.2:60426363-60426382 | MS.gene016556:intron | 30.0% | |
GTTTGTACAAAAAGCTATTC+GGG | - | chr8.2:60429157-60429176 | MS.gene016556:intron | 30.0% | |
TATACAATCTCCACATGATA+AGG | + | chr8.2:60426827-60426846 | None:intergenic | 30.0% | |
TCATTGTATAGTATGTAACG+TGG | - | chr8.2:60426867-60426886 | MS.gene016556:intron | 30.0% | |
TCCTTACTTTCTTTCTCAAT+CGG | + | chr8.2:60429014-60429033 | None:intergenic | 30.0% | |
TGATAAGGTTTAACCTAGAA+TGG | + | chr8.2:60426812-60426831 | None:intergenic | 30.0% | |
TTGTCAAATGGAAACTATAG+TGG | + | chr8.2:60427727-60427746 | None:intergenic | 30.0% | |
TTTGTTAATTGCAACCTATG+TGG | + | chr8.2:60428200-60428219 | None:intergenic | 30.0% | |
! | ATGTCGGTTACAAAGTTATA+AGG | + | chr8.2:60429190-60429209 | None:intergenic | 30.0% |
! | ATTCTAGTGTTGTTGAATAG+CGG | + | chr8.2:60427832-60427851 | None:intergenic | 30.0% |
! | ATTTAGATTTAGGGCTTGTT+TGG | - | chr8.2:60426373-60426392 | MS.gene016556:intron | 30.0% |
! | CAAAAAGTGTAACTTCCTAT+TGG | + | chr8.2:60429216-60429235 | None:intergenic | 30.0% |
! | CAATAGGAAGTTACACTTTT+TGG | - | chr8.2:60429214-60429233 | MS.gene016556:intron | 30.0% |
! | GCATGTTTGAATTATTTTCG+AGG | - | chr8.2:60429414-60429433 | MS.gene016556:intron | 30.0% |
! | GTACTTGACATGTTTTCTTT+GGG | - | chr8.2:60427129-60427148 | MS.gene016556:CDS | 30.0% |
! | GTTTGGATTGACTTATTTAC+TGG | - | chr8.2:60426390-60426409 | MS.gene016556:intron | 30.0% |
! | TACTTGACATGTTTTCTTTG+GGG | - | chr8.2:60427130-60427149 | MS.gene016556:CDS | 30.0% |
! | TTCAATTGATTTCAAGGAAC+AGG | + | chr8.2:60430961-60430980 | None:intergenic | 30.0% |
! | TTCCTTTTTATGCTGATACT+CGG | - | chr8.2:60430927-60430946 | MS.gene016556:intron | 30.0% |
!! | AAGTACAAAGTGTTGTCAAA+TGG | + | chr8.2:60427739-60427758 | None:intergenic | 30.0% |
!! | AATAATTTTAACATGAGGGG+GGG | - | chr8.2:60429263-60429282 | MS.gene016556:intron | 30.0% |
!! | AGTAGATTTGAGGTATTGTT+TGG | - | chr8.2:60430219-60430238 | MS.gene016556:intron | 30.0% |
!! | CAATAATTTTAACATGAGGG+GGG | - | chr8.2:60429262-60429281 | MS.gene016556:intron | 30.0% |
!! | CCAATAATTTTAACATGAGG+GGG | - | chr8.2:60429261-60429280 | MS.gene016556:intron | 30.0% |
!! | GCCAATAATTTTAACATGAG+GGG | - | chr8.2:60429260-60429279 | MS.gene016556:intron | 30.0% |
!! | TTGTTGCTTTGAATGAAGAA+TGG | - | chr8.2:60426239-60426258 | MS.gene016556:intron | 30.0% |
!! | TTTGAGGTATTGTTTGGTAT+AGG | - | chr8.2:60430225-60430244 | MS.gene016556:intron | 30.0% |
AAAAGTAATCATGGATGGCA+AGG | + | chr8.2:60431823-60431842 | None:intergenic | 35.0% | |
AAAATAGAGTACGACTGCTA+CGG | + | chr8.2:60429984-60430003 | None:intergenic | 35.0% | |
AACGACTACTTTCCAATTGT+TGG | + | chr8.2:60429825-60429844 | None:intergenic | 35.0% | |
AACTTCCTATTGGACAATGT+CGG | + | chr8.2:60429206-60429225 | None:intergenic | 35.0% | |
AAGCTTCAATCATCAAATCC+AGG | - | chr8.2:60428218-60428237 | MS.gene016556:intron | 35.0% | |
AAGTGTTCATACAGAAAACC+AGG | - | chr8.2:60428256-60428275 | MS.gene016556:intron | 35.0% | |
AATTCGATGCAGAATATGCA+AGG | - | chr8.2:60430628-60430647 | MS.gene016556:CDS | 35.0% | |
ACAGCTTCTGGTAAATCAAT+TGG | - | chr8.2:60431230-60431249 | MS.gene016556:intron | 35.0% | |
ACTTTCCAATTGTTGGACAT+AGG | + | chr8.2:60429818-60429837 | None:intergenic | 35.0% | |
AGAAATATACCATGCATCGT+CGG | + | chr8.2:60426103-60426122 | None:intergenic | 35.0% | |
AGTCTTCTTGTAATCTGACT+TGG | - | chr8.2:60427370-60427389 | MS.gene016556:intron | 35.0% | |
ATCAACAATCATGCGAAGTT+CGG | + | chr8.2:60430721-60430740 | None:intergenic | 35.0% | |
ATGGATTTCAGCTATACAGA+TGG | - | chr8.2:60427258-60427277 | MS.gene016556:CDS | 35.0% | |
ATGTATTTAACAGCAGGCTT+AGG | + | chr8.2:60431110-60431129 | None:intergenic | 35.0% | |
ATGTTGGCAACTAAAGAGAA+AGG | + | chr8.2:60428142-60428161 | None:intergenic | 35.0% | |
CAGGTCATATGATTCTTCAA+CGG | + | chr8.2:60429383-60429402 | None:intergenic | 35.0% | |
CATTACGGAACATCTAATTG+CGG | - | chr8.2:60428106-60428125 | MS.gene016556:intron | 35.0% | |
CCCCCTCATGTTAAAATTAT+TGG | + | chr8.2:60429264-60429283 | None:intergenic | 35.0% | |
CTAGGTTAAACCTTATCATG+TGG | - | chr8.2:60426814-60426833 | MS.gene016556:intron | 35.0% | |
CTGTTGTACCCTTTCATAAA+TGG | + | chr8.2:60430411-60430430 | None:intergenic | 35.0% | |
CTTCAAGTCAAAACTCATTC+TGG | + | chr8.2:60429520-60429539 | None:intergenic | 35.0% | |
GAAAGTAAGAAGAGAGAAGT+AGG | - | chr8.2:60430156-60430175 | MS.gene016556:intron | 35.0% | |
GAATGAAGAATGGATAGTGA+AGG | - | chr8.2:60426249-60426268 | MS.gene016556:intron | 35.0% | |
GTTTAACCTAGAATGGGAAA+TGG | + | chr8.2:60426805-60426824 | None:intergenic | 35.0% | |
TACAATTCAATGGTCAATCG+AGG | + | chr8.2:60429764-60429783 | None:intergenic | 35.0% | |
TCACTGTGAATATCTTCCTT+GGG | - | chr8.2:60426755-60426774 | MS.gene016556:intron | 35.0% | |
TGAGACATGTATTTAACAGC+AGG | + | chr8.2:60431116-60431135 | None:intergenic | 35.0% | |
TGGATTTCAGCTATACAGAT+GGG | - | chr8.2:60427259-60427278 | MS.gene016556:CDS | 35.0% | |
TGGTCTTCCTTCAGTTAAAT+TGG | - | chr8.2:60429234-60429253 | MS.gene016556:intron | 35.0% | |
TGTATTTAACAGCAGGCTTA+GGG | + | chr8.2:60431109-60431128 | None:intergenic | 35.0% | |
TGTCAGGTCTTACAATTCAA+TGG | + | chr8.2:60429774-60429793 | None:intergenic | 35.0% | |
TGTTGTATTATCTCGTGTCT+TGG | - | chr8.2:60427429-60427448 | MS.gene016556:intron | 35.0% | |
TTCAACATTTATACCGAAGC+AGG | + | chr8.2:60428079-60428098 | None:intergenic | 35.0% | |
TTCATTAGCAAAGGAAAGGA+TGG | + | chr8.2:60427923-60427942 | None:intergenic | 35.0% | |
TTCTAACGAATTTCCTGCTT+CGG | - | chr8.2:60428063-60428082 | MS.gene016556:CDS | 35.0% | |
TTGACAAGTTCAACTTGAAC+TGG | + | chr8.2:60428449-60428468 | None:intergenic | 35.0% | |
TTGACTTAGTGTGACAAATG+TGG | - | chr8.2:60431205-60431224 | MS.gene016556:intron | 35.0% | |
TTGTACCCTTTCATAAATGG+TGG | + | chr8.2:60430408-60430427 | None:intergenic | 35.0% | |
TTGTACTTAATAGCGTATCG+TGG | - | chr8.2:60427751-60427770 | MS.gene016556:intron | 35.0% | |
TTGTTGATCGAAATTTGGCA+TGG | - | chr8.2:60427082-60427101 | MS.gene016556:CDS | 35.0% | |
TTTATCCTTTGATCTGTCAC+TGG | + | chr8.2:60428837-60428856 | None:intergenic | 35.0% | |
! | AGAAGGGAGAAAAAGCATAA+AGG | + | chr8.2:60428374-60428393 | None:intergenic | 35.0% |
! | CATTTATGAAAGGGTACAAC+AGG | - | chr8.2:60430409-60430428 | MS.gene016556:intron | 35.0% |
! | GGTACTTGACATGTTTTCTT+TGG | - | chr8.2:60427128-60427147 | MS.gene016556:CDS | 35.0% |
! | TATGCTGACCCTTTTCAATA+TGG | - | chr8.2:60430898-60430917 | MS.gene016556:intron | 35.0% |
! | TGGTACATTTGCATGGTTTT+TGG | - | chr8.2:60431520-60431539 | MS.gene016556:intron | 35.0% |
!! | ATAATTTTAACATGAGGGGG+GGG | - | chr8.2:60429264-60429283 | MS.gene016556:intron | 35.0% |
!! | CCATCCATGATTACTTTTCA+CGG | - | chr8.2:60431825-60431844 | MS.gene016556:CDS | 35.0% |
!! | GATGAGATTTTTAGGCTGAA+AGG | - | chr8.2:60430759-60430778 | MS.gene016556:intron | 35.0% |
!!! | GATGTTTTCCATTTGTTGTC+TGG | - | chr8.2:60430798-60430817 | MS.gene016556:intron | 35.0% |
AAACCAGGAAGAATTTGCCA+TGG | - | chr8.2:60428271-60428290 | MS.gene016556:intron | 40.0% | |
AACAAGAACTTTCTTTGGCG+TGG | - | chr8.2:60431030-60431049 | MS.gene016556:intron | 40.0% | |
ACAAATGTGGTTACAGCTTC+TGG | - | chr8.2:60431218-60431237 | MS.gene016556:intron | 40.0% | |
ACAATGCATCTTCTGCTTGT+TGG | + | chr8.2:60431308-60431327 | None:intergenic | 40.0% | |
ACACATTCACTGAGTGGAAA+TGG | - | chr8.2:60430063-60430082 | MS.gene016556:intron | 40.0% | |
ACACTTCCATTTCCCATTCT+AGG | - | chr8.2:60426796-60426815 | MS.gene016556:intron | 40.0% | |
ACTCACCTTATCAAGAGAAC+TGG | + | chr8.2:60428027-60428046 | None:intergenic | 40.0% | |
ACTGGTGCAATCTAATTGCA+AGG | + | chr8.2:60429911-60429930 | None:intergenic | 40.0% | |
AGATGTGCAAATGCAGGATA+GGG | + | chr8.2:60428421-60428440 | None:intergenic | 40.0% | |
AGCCGAGTATCAGCATAAAA+AGG | + | chr8.2:60430932-60430951 | None:intergenic | 40.0% | |
AGGACTGATATTTCGACAGA+TGG | - | chr8.2:60428308-60428327 | MS.gene016556:intron | 40.0% | |
ATAGGCCTATGTCCAACAAT+TGG | - | chr8.2:60429810-60429829 | MS.gene016556:intron | 40.0% | |
ATGGGAAGTAGAATCAGAGT+TGG | - | chr8.2:60426030-60426049 | MS.gene016556:CDS | 40.0% | |
CAAGTCAAAACTCATTCTGG+AGG | + | chr8.2:60429517-60429536 | None:intergenic | 40.0% | |
CAATCATCAAATCCAGGTAG+CGG | - | chr8.2:60428224-60428243 | MS.gene016556:intron | 40.0% | |
CAATGCATCTTCTGCTTGTT+GGG | + | chr8.2:60431307-60431326 | None:intergenic | 40.0% | |
CATAAGAAACACCTTTCAGC+AGG | + | chr8.2:60430837-60430856 | None:intergenic | 40.0% | |
CCGTGAAAAGTAATCATGGA+TGG | + | chr8.2:60431828-60431847 | None:intergenic | 40.0% | |
CGTGTCGCACAAAAATCAAA+AGG | + | chr8.2:60429958-60429977 | None:intergenic | 40.0% | |
GAACAAACACATTCACTGAG+TGG | - | chr8.2:60430057-60430076 | MS.gene016556:intron | 40.0% | |
GAACTTCGCATGATTGTTGA+TGG | - | chr8.2:60430720-60430739 | MS.gene016556:intron | 40.0% | |
GCCGATTGAGAAAGAAAGTA+AGG | - | chr8.2:60429010-60429029 | MS.gene016556:intron | 40.0% | |
GCTAGTTGTATGACAGGAAA+AGG | - | chr8.2:60427035-60427054 | MS.gene016556:CDS | 40.0% | |
GGCAAATTACATGGGTCAAA+TGG | - | chr8.2:60431413-60431432 | MS.gene016556:intron | 40.0% | |
GGGAATGTGGCAAATTACAT+GGG | - | chr8.2:60431405-60431424 | MS.gene016556:intron | 40.0% | |
GTCACTGTGAATATCTTCCT+TGG | - | chr8.2:60426754-60426773 | MS.gene016556:intron | 40.0% | |
TAGTCAACCATATCGCTTAG+AGG | - | chr8.2:60427323-60427342 | MS.gene016556:intron | 40.0% | |
TAGTCCAGTTGGTCCATATA+AGG | + | chr8.2:60426653-60426672 | None:intergenic | 40.0% | |
TATGCAGCTAGTTGTATGAC+AGG | - | chr8.2:60427029-60427048 | MS.gene016556:intron | 40.0% | |
TATTATTGTAGACTCTCCGC+AGG | - | chr8.2:60428956-60428975 | MS.gene016556:intron | 40.0% | |
TCACACCAGTTCTCTTGATA+AGG | - | chr8.2:60428019-60428038 | MS.gene016556:intron | 40.0% | |
TCGAAATTTGGCATGGTTCA+TGG | - | chr8.2:60427089-60427108 | MS.gene016556:CDS | 40.0% | |
TCTGTCGAAATATCAGTCCT+AGG | + | chr8.2:60428308-60428327 | None:intergenic | 40.0% | |
TGAGCAGTGTAGTAGATTTG+AGG | - | chr8.2:60430209-60430228 | MS.gene016556:intron | 40.0% | |
TGCAGATCGCAGAAAATAGT+GGG | - | chr8.2:60427666-60427685 | MS.gene016556:intron | 40.0% | |
TGTAACCGACATTGTCCAAT+AGG | - | chr8.2:60429198-60429217 | MS.gene016556:intron | 40.0% | |
TTACATGGGTCAAATGGCTA+TGG | - | chr8.2:60431419-60431438 | MS.gene016556:intron | 40.0% | |
TTGCAGATCGCAGAAAATAG+TGG | - | chr8.2:60427665-60427684 | MS.gene016556:intron | 40.0% | |
! | AAGCTATGTTGCAGAGCTTT+TGG | + | chr8.2:60428516-60428535 | None:intergenic | 40.0% |
! | ACATAATTGGGCTCTAGTCT+TGG | - | chr8.2:60426982-60427001 | MS.gene016556:intron | 40.0% |
! | ACTATGGTGTTTTACGCTGA+TGG | + | chr8.2:60430511-60430530 | None:intergenic | 40.0% |
! | TCGGGGTTCAATTGATTTCA+AGG | + | chr8.2:60430967-60430986 | None:intergenic | 40.0% |
! | TGGCTTGCCAATTTAACTGA+AGG | + | chr8.2:60429244-60429263 | None:intergenic | 40.0% |
!! | AAATCAATCCCTTGCTGTTG+CGG | - | chr8.2:60428802-60428821 | MS.gene016556:intron | 40.0% |
!! | AGTTGGTGTTGAAGATGAGA+AGG | - | chr8.2:60426047-60426066 | MS.gene016556:CDS | 40.0% |
!! | CATGATTGTTGATGGTGTAG+TGG | - | chr8.2:60430728-60430747 | MS.gene016556:intron | 40.0% |
!! | CTGCTGAAAGGTGTTTCTTA+TGG | - | chr8.2:60430835-60430854 | MS.gene016556:intron | 40.0% |
!! | GAAAGGTGTTTCTTATGGCT+TGG | - | chr8.2:60430840-60430859 | MS.gene016556:intron | 40.0% |
!! | GCATTTGTTGTAGTGTTTGC+TGG | + | chr8.2:60431763-60431782 | None:intergenic | 40.0% |
!! | GTTGGTGTTGAAGATGAGAA+GGG | - | chr8.2:60426048-60426067 | MS.gene016556:CDS | 40.0% |
!! | TAATTTTAACATGAGGGGGG+GGG | - | chr8.2:60429265-60429284 | MS.gene016556:intron | 40.0% |
!!! | TCTTATGGCTTGGTGGTTTT+CGG | - | chr8.2:60430850-60430869 | MS.gene016556:intron | 40.0% |
ACACCGATGACAAGAATCAG+CGG | - | chr8.2:60428333-60428352 | MS.gene016556:intron | 45.0% | |
ACAGCATCCTCTAAGCGATA+TGG | + | chr8.2:60427333-60427352 | None:intergenic | 45.0% | |
ACTGAATCTAACCTGTTGCC+TGG | + | chr8.2:60429884-60429903 | None:intergenic | 45.0% | |
AGAAAGAGAGAGCAGACAAC+TGG | + | chr8.2:60429929-60429948 | None:intergenic | 45.0% | |
AGATGCATTGTCTCAGGGTA+TGG | - | chr8.2:60431317-60431336 | MS.gene016556:intron | 45.0% | |
AGCAGAAGATGCATTGTCTC+AGG | - | chr8.2:60431311-60431330 | MS.gene016556:intron | 45.0% | |
AGTGGCCAAACAATTTCTCC+TGG | - | chr8.2:60427990-60428009 | MS.gene016556:intron | 45.0% | |
ATGAGAAGGGAGCAGAAAGA+GGG | - | chr8.2:60426061-60426080 | MS.gene016556:CDS | 45.0% | |
CAAAACCGCTCTGCCTTATA+TGG | - | chr8.2:60426637-60426656 | MS.gene016556:CDS | 45.0% | |
CAAGAGAACTGGTGTGAACA+GGG | + | chr8.2:60428016-60428035 | None:intergenic | 45.0% | |
CAGATGTGCAAATGCAGGAT+AGG | + | chr8.2:60428422-60428441 | None:intergenic | 45.0% | |
CAGCTTACAAACAGTCTCAC+AGG | + | chr8.2:60426424-60426443 | None:intergenic | 45.0% | |
CATCTGAACTTCTCAAGGTG+AGG | - | chr8.2:60430874-60430893 | MS.gene016556:intron | 45.0% | |
CATGGTGTATCGTGTTCACT+GGG | - | chr8.2:60427107-60427126 | MS.gene016556:CDS | 45.0% | |
CGAAATATCAGTCCTAGGAC+TGG | + | chr8.2:60428303-60428322 | None:intergenic | 45.0% | |
CTATCCTGCATTTGCACATC+TGG | - | chr8.2:60428420-60428439 | MS.gene016556:intron | 45.0% | |
CTGAAGCTCTTGCTCTAGTT+GGG | + | chr8.2:60429857-60429876 | None:intergenic | 45.0% | |
CTGTGAATATCTTCCTTGGG+TGG | - | chr8.2:60426758-60426777 | MS.gene016556:intron | 45.0% | |
CTTAATATGGTACCGCTACC+TGG | + | chr8.2:60428239-60428258 | None:intergenic | 45.0% | |
GAGTGTTCCAAGTTTACCCA+TGG | + | chr8.2:60431445-60431464 | None:intergenic | 45.0% | |
GCAGAAGATGCATTGTCTCA+GGG | - | chr8.2:60431312-60431331 | MS.gene016556:intron | 45.0% | |
GCAGCCGTGAAAAGTAATCA+TGG | + | chr8.2:60431832-60431851 | None:intergenic | 45.0% | |
GGAGTCTTCATATCAAGCTC+GGG | - | chr8.2:60430033-60430052 | MS.gene016556:intron | 45.0% | |
GGGAGTCTTCATATCAAGCT+CGG | - | chr8.2:60430032-60430051 | MS.gene016556:intron | 45.0% | |
GGGGAATGTGGCAAATTACA+TGG | - | chr8.2:60431404-60431423 | MS.gene016556:intron | 45.0% | |
GGTAAACTTGGAACACTCGA+GGG | - | chr8.2:60431447-60431466 | MS.gene016556:intron | 45.0% | |
GTTTCCAGATGTGCAAATGC+AGG | + | chr8.2:60428427-60428446 | None:intergenic | 45.0% | |
TCAAGAGAACTGGTGTGAAC+AGG | + | chr8.2:60428017-60428036 | None:intergenic | 45.0% | |
TCATGGTGTATCGTGTTCAC+TGG | - | chr8.2:60427106-60427125 | MS.gene016556:CDS | 45.0% | |
TCCACATGCCAGACAACAAA+TGG | + | chr8.2:60430809-60430828 | None:intergenic | 45.0% | |
TCGATGCAGAATATGCAAGG+TGG | - | chr8.2:60430631-60430650 | MS.gene016556:CDS | 45.0% | |
TCGGTCATCTGAACTTCTCA+AGG | - | chr8.2:60430869-60430888 | MS.gene016556:intron | 45.0% | |
TCTGCCTTATATGGACCAAC+TGG | - | chr8.2:60426646-60426665 | MS.gene016556:CDS | 45.0% | |
TGACTCCAGTGACAGATCAA+AGG | - | chr8.2:60428829-60428848 | MS.gene016556:intron | 45.0% | |
TGTGGAAAACACCTGCTGAA+AGG | - | chr8.2:60430823-60430842 | MS.gene016556:intron | 45.0% | |
TTGGGAGGATTGTTGCAAGT+TGG | + | chr8.2:60431289-60431308 | None:intergenic | 45.0% | |
TTGGTCCATATAAGGCAGAG+CGG | + | chr8.2:60426645-60426664 | None:intergenic | 45.0% | |
! | AGGTGTTTCTTATGGCTTGG+TGG | - | chr8.2:60430843-60430862 | MS.gene016556:intron | 45.0% |
! | ATGGTGTTTTACGCTGATGG+TGG | + | chr8.2:60430508-60430527 | None:intergenic | 45.0% |
! | GGGCTTTTATCACGTGATGT+TGG | + | chr8.2:60428158-60428177 | None:intergenic | 45.0% |
! | TGGTGTTTTACGCTGATGGT+GGG | + | chr8.2:60430507-60430526 | None:intergenic | 45.0% |
!! | AATCAATCCCTTGCTGTTGC+GGG | - | chr8.2:60428803-60428822 | MS.gene016556:intron | 45.0% |
!! | AATTTTAACATGAGGGGGGG+GGG | - | chr8.2:60429266-60429285 | MS.gene016556:intron | 45.0% |
!! | CTATGTAGCACCGACACTTT+AGG | - | chr8.2:60431570-60431589 | MS.gene016556:intron | 45.0% |
!! | TCCATTTGTTGTCTGGCATG+TGG | - | chr8.2:60430805-60430824 | MS.gene016556:intron | 45.0% |
!! | AAATTTAAAGATAATAAATA+TGG | + | chr8.2:60429569-60429588 | None:intergenic | 5.0% |
AGTGGACAACGTCTCTGCAA+GGG | + | chr8.2:60431358-60431377 | None:intergenic | 50.0% | |
ATCAACTGCTGCTCAGTGAG+AGG | + | chr8.2:60431258-60431277 | None:intergenic | 50.0% | |
CACCGATGACAAGAATCAGC+GGG | - | chr8.2:60428334-60428353 | MS.gene016556:intron | 50.0% | |
CAGGGCCAGGAGAAATTGTT+TGG | + | chr8.2:60427998-60428017 | None:intergenic | 50.0% | |
CTCACTGAGCAGCAGTTGAT+GGG | - | chr8.2:60431258-60431277 | MS.gene016556:intron | 50.0% | |
CTTCGCAGCTGAGAGAAGAA+AGG | - | chr8.2:60430468-60430487 | MS.gene016556:intron | 50.0% | |
GAACACTCGAGGGCTTCATT+CGG | - | chr8.2:60431457-60431476 | MS.gene016556:intron | 50.0% | |
GAACTTTCTTTGGCGTGGCA+TGG | - | chr8.2:60431035-60431054 | MS.gene016556:intron | 50.0% | |
GATGAGAAGGGAGCAGAAAG+AGG | - | chr8.2:60426060-60426079 | MS.gene016556:CDS | 50.0% | |
GCATCGTCGGAATTGAAGCT+CGG | + | chr8.2:60426090-60426109 | None:intergenic | 50.0% | |
GCTATGGCCATGGGTAAACT+TGG | - | chr8.2:60431435-60431454 | MS.gene016556:intron | 50.0% | |
GCTGAAGCTCTTGCTCTAGT+TGG | + | chr8.2:60429858-60429877 | None:intergenic | 50.0% | |
GCTTCAATTCCGACGATGCA+TGG | - | chr8.2:60426091-60426110 | MS.gene016556:CDS | 50.0% | |
GGGTAAACTTGGAACACTCG+AGG | - | chr8.2:60431446-60431465 | MS.gene016556:intron | 50.0% | |
GGTCAAATGGCTATGGCCAT+GGG | - | chr8.2:60431426-60431445 | MS.gene016556:intron | 50.0% | |
TCTCACTGAGCAGCAGTTGA+TGG | - | chr8.2:60431257-60431276 | MS.gene016556:intron | 50.0% | |
TGCAGAATATGCAAGGTGGC+TGG | - | chr8.2:60430635-60430654 | MS.gene016556:intron | 50.0% | |
TTCCTTGGGTGGTTAGAGTG+AGG | - | chr8.2:60426769-60426788 | MS.gene016556:intron | 50.0% | |
TTTCTTTGGCGTGGCATGGT+GGG | - | chr8.2:60431039-60431058 | MS.gene016556:intron | 50.0% | |
! | ACCTTCCTCATCTGGTTCCT+CGG | - | chr8.2:60431383-60431402 | MS.gene016556:intron | 50.0% |
! | ATCAGTCCTAGGACTGGCAT+CGG | + | chr8.2:60428297-60428316 | None:intergenic | 50.0% |
! | GAGGATGCTGTTGTTCTGAG+TGG | - | chr8.2:60427342-60427361 | MS.gene016556:intron | 50.0% |
! | GCAGAGCGGTTTTGCATAGA+GGG | + | chr8.2:60426631-60426650 | None:intergenic | 50.0% |
! | GCTCTGCTTGGTTCGTCAAT+GGG | + | chr8.2:60428178-60428197 | None:intergenic | 50.0% |
! | GTAATTTGCCACATTCCCCG+AGG | + | chr8.2:60431403-60431422 | None:intergenic | 50.0% |
! | TGCATCTTCTGCTTGTTGGG+AGG | + | chr8.2:60431304-60431323 | None:intergenic | 50.0% |
!! | ATTTTAACATGAGGGGGGGG+GGG | - | chr8.2:60429267-60429286 | MS.gene016556:intron | 50.0% |
!! | CACCCGCTGATTCTTGTCAT+CGG | + | chr8.2:60428339-60428358 | None:intergenic | 50.0% |
!! | GCTCTAGTCTTGGAGAGCAT+CGG | - | chr8.2:60426992-60427011 | MS.gene016556:intron | 50.0% |
!! | GCTGAAAGGTGTTGCAGCTA+AGG | - | chr8.2:60430773-60430792 | MS.gene016556:intron | 50.0% |
ACTGGTGCACCTTCCTCATC+TGG | - | chr8.2:60431375-60431394 | MS.gene016556:intron | 55.0% | |
AGCCTCACTCTAACCACCCA+AGG | + | chr8.2:60426774-60426793 | None:intergenic | 55.0% | |
AGTCAGAACCCGCAACAGCA+AGG | + | chr8.2:60428814-60428833 | None:intergenic | 55.0% | |
ATTCCCCGAGGAACCAGATG+AGG | + | chr8.2:60431391-60431410 | None:intergenic | 55.0% | |
CAGTGGACAACGTCTCTGCA+AGG | + | chr8.2:60431359-60431378 | None:intergenic | 55.0% | |
CGAACCAAGCAGAGCCACAT+AGG | - | chr8.2:60428183-60428202 | MS.gene016556:intron | 55.0% | |
CGGCCATGGCAAATTCTTCC+TGG | + | chr8.2:60428277-60428296 | None:intergenic | 55.0% | |
CTTGCAGAGACGTTGTCCAC+TGG | - | chr8.2:60431357-60431376 | MS.gene016556:intron | 55.0% | |
CTTTCTTTGGCGTGGCATGG+TGG | - | chr8.2:60431038-60431057 | MS.gene016556:intron | 55.0% | |
GGGTCAAATGGCTATGGCCA+TGG | - | chr8.2:60431425-60431444 | MS.gene016556:intron | 55.0% | |
GTCAGAACCCGCAACAGCAA+GGG | + | chr8.2:60428813-60428832 | None:intergenic | 55.0% | |
! | AGATGAGGAAGGTGCACCAG+TGG | + | chr8.2:60431376-60431395 | None:intergenic | 55.0% |
! | ATCTGGTTCCTCGGGGAATG+TGG | - | chr8.2:60431392-60431411 | MS.gene016556:intron | 55.0% |
! | CCTTCCTCATCTGGTTCCTC+GGG | - | chr8.2:60431384-60431403 | MS.gene016556:intron | 55.0% |
! | CTTCCTCATCTGGTTCCTCG+GGG | - | chr8.2:60431385-60431404 | MS.gene016556:intron | 55.0% |
! | GCAACCTATGTGGCTCTGCT+TGG | + | chr8.2:60428190-60428209 | None:intergenic | 55.0% |
! | GGCAGAGCGGTTTTGCATAG+AGG | + | chr8.2:60426632-60426651 | None:intergenic | 55.0% |
! | GGCTCTGCTTGGTTCGTCAA+TGG | + | chr8.2:60428179-60428198 | None:intergenic | 55.0% |
! | TTTTAACATGAGGGGGGGGG+GGG | - | chr8.2:60429268-60429287 | MS.gene016556:intron | 55.0% |
ACTCGAGGGCTTCATTCGGC+AGG | - | chr8.2:60431461-60431480 | MS.gene016556:intron | 60.0% | |
AGCAAGAGCTTCAGCGAGCC+AGG | - | chr8.2:60429863-60429882 | MS.gene016556:intron | 60.0% | |
CACGATTCTGAGCGAGCCTG+CGG | + | chr8.2:60428975-60428994 | None:intergenic | 60.0% | |
CAGGCTCGCTCAGAATCGTG+AGG | - | chr8.2:60428975-60428994 | MS.gene016556:intron | 60.0% | |
CCCGAGGAACCAGATGAGGA+AGG | + | chr8.2:60431387-60431406 | None:intergenic | 60.0% | |
CGCTCTCAGCTCTCTCTGGT+TGG | - | chr8.2:60431853-60431872 | MS.gene016556:CDS | 60.0% | |
GAACTGGTGTGAACAGGGCC+AGG | + | chr8.2:60428011-60428030 | None:intergenic | 60.0% | |
GCTCGCTCAGAATCGTGAGG+CGG | - | chr8.2:60428978-60428997 | MS.gene016556:intron | 60.0% | |
TTTAACATGAGGGGGGGGGG+GGG | - | chr8.2:60429269-60429288 | MS.gene016556:intron | 60.0% | |
CCATGGCCGATGCCAGTCCT+AGG | - | chr8.2:60428288-60428307 | MS.gene016556:intron | 65.0% | |
GCTTCAGCGAGCCAGGCAAC+AGG | - | chr8.2:60429870-60429889 | MS.gene016556:intron | 65.0% | |
TGCGCGCTCTCAGCTCTCTC+TGG | - | chr8.2:60431849-60431868 | MS.gene016556:CDS | 65.0% | |
TTAACATGAGGGGGGGGGGG+GGG | - | chr8.2:60429270-60429289 | MS.gene016556:intron | 65.0% | |
!! | CCTAGGACTGGCATCGGCCA+TGG | + | chr8.2:60428291-60428310 | None:intergenic | 65.0% |
TAACATGAGGGGGGGGGGGG+GGG | - | chr8.2:60429271-60429290 | MS.gene016556:intron | 70.0% | |
AACATGAGGGGGGGGGGGGG+GGG | - | chr8.2:60429272-60429291 | MS.gene016556:intron | 75.0% | |
! | ACATGAGGGGGGGGGGGGGG+GGG | - | chr8.2:60429273-60429292 | MS.gene016556:intron | 80.0% |
! | ATGAGGGGGGGGGGGGGGGG+GGG | - | chr8.2:60429275-60429294 | MS.gene016556:intron | 85.0% |
! | CATGAGGGGGGGGGGGGGGG+GGG | - | chr8.2:60429274-60429293 | MS.gene016556:intron | 85.0% |
! | GGGGGGGGGGGGGGGGGCTT+AGG | - | chr8.2:60429290-60429309 | MS.gene016556:intron | 90.0% |
! | TGAGGGGGGGGGGGGGGGGG+GGG | - | chr8.2:60429276-60429295 | MS.gene016556:intron | 90.0% |
! | AGGGGGGGGGGGGGGGGGGG+GGG | - | chr8.2:60429278-60429297 | MS.gene016556:intron | 95.0% |
! | GAGGGGGGGGGGGGGGGGGG+GGG | - | chr8.2:60429277-60429296 | MS.gene016556:intron | 95.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 60426030 | 60431892 | 60426030 | ID=MS.gene016556 |
chr8.2 | mRNA | 60426030 | 60431892 | 60426030 | ID=MS.gene016556.t1;Parent=MS.gene016556 |
chr8.2 | exon | 60431810 | 60431892 | 60431810 | ID=MS.gene016556.t1.exon1;Parent=MS.gene016556.t1 |
chr8.2 | CDS | 60431810 | 60431892 | 60431810 | ID=cds.MS.gene016556.t1;Parent=MS.gene016556.t1 |
chr8.2 | exon | 60430556 | 60430653 | 60430556 | ID=MS.gene016556.t1.exon2;Parent=MS.gene016556.t1 |
chr8.2 | CDS | 60430556 | 60430653 | 60430556 | ID=cds.MS.gene016556.t1;Parent=MS.gene016556.t1 |
chr8.2 | exon | 60429882 | 60429964 | 60429882 | ID=MS.gene016556.t1.exon3;Parent=MS.gene016556.t1 |
chr8.2 | CDS | 60429882 | 60429964 | 60429882 | ID=cds.MS.gene016556.t1;Parent=MS.gene016556.t1 |
chr8.2 | exon | 60429567 | 60429770 | 60429567 | ID=MS.gene016556.t1.exon4;Parent=MS.gene016556.t1 |
chr8.2 | CDS | 60429567 | 60429770 | 60429567 | ID=cds.MS.gene016556.t1;Parent=MS.gene016556.t1 |
chr8.2 | exon | 60429054 | 60429128 | 60429054 | ID=MS.gene016556.t1.exon5;Parent=MS.gene016556.t1 |
chr8.2 | CDS | 60429054 | 60429128 | 60429054 | ID=cds.MS.gene016556.t1;Parent=MS.gene016556.t1 |
chr8.2 | exon | 60428896 | 60428955 | 60428896 | ID=MS.gene016556.t1.exon6;Parent=MS.gene016556.t1 |
chr8.2 | CDS | 60428896 | 60428955 | 60428896 | ID=cds.MS.gene016556.t1;Parent=MS.gene016556.t1 |
chr8.2 | exon | 60428031 | 60428108 | 60428031 | ID=MS.gene016556.t1.exon7;Parent=MS.gene016556.t1 |
chr8.2 | CDS | 60428031 | 60428108 | 60428031 | ID=cds.MS.gene016556.t1;Parent=MS.gene016556.t1 |
chr8.2 | exon | 60427838 | 60427889 | 60427838 | ID=MS.gene016556.t1.exon8;Parent=MS.gene016556.t1 |
chr8.2 | CDS | 60427838 | 60427889 | 60427838 | ID=cds.MS.gene016556.t1;Parent=MS.gene016556.t1 |
chr8.2 | exon | 60427032 | 60427303 | 60427032 | ID=MS.gene016556.t1.exon9;Parent=MS.gene016556.t1 |
chr8.2 | CDS | 60427032 | 60427303 | 60427032 | ID=cds.MS.gene016556.t1;Parent=MS.gene016556.t1 |
chr8.2 | exon | 60426440 | 60426688 | 60426440 | ID=MS.gene016556.t1.exon10;Parent=MS.gene016556.t1 |
chr8.2 | CDS | 60426440 | 60426688 | 60426440 | ID=cds.MS.gene016556.t1;Parent=MS.gene016556.t1 |
chr8.2 | exon | 60426030 | 60426176 | 60426030 | ID=MS.gene016556.t1.exon11;Parent=MS.gene016556.t1 |
chr8.2 | CDS | 60426030 | 60426176 | 60426030 | ID=cds.MS.gene016556.t1;Parent=MS.gene016556.t1 |
Gene Sequence |
Protein sequence |