AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene017753

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017753.t1 MTR_7g089800 99.558 453 1 1 1 453 1 452 0.0 921
MS.gene017753.t1 MTR_7g089800 99.764 423 1 0 31 453 1 423 0.0 863
MS.gene017753.t1 MTR_8g040120 67.660 470 131 9 1 453 1 466 0.0 580
MS.gene017753.t1 MTR_5g054900 52.596 443 171 10 40 453 2 434 4.34e-144 419
MS.gene017753.t1 MTR_5g054900 51.663 451 175 11 32 453 24 460 4.58e-140 409
MS.gene017753.t1 MTR_5g054900 59.312 349 113 4 124 453 15 353 6.50e-140 405
MS.gene017753.t1 MTR_5g054900 58.739 349 111 5 124 453 15 349 6.43e-136 395
MS.gene017753.t1 MTR_7g092750 58.232 328 124 5 135 453 39 362 9.31e-130 380
MS.gene017753.t1 MTR_7g092750 58.232 328 124 5 135 453 140 463 2.61e-128 380
MS.gene017753.t1 MTR_1g111310 62.739 314 101 4 145 453 405 707 3.20e-127 385
MS.gene017753.t1 MTR_1g111310 61.716 303 102 3 145 447 38 326 1.41e-114 352
MS.gene017753.t1 MTR_2g086420 61.458 288 101 2 166 453 191 468 9.66e-122 364
MS.gene017753.t1 MTR_2g086420 61.458 288 101 2 166 453 192 469 1.09e-121 364
MS.gene017753.t1 MTR_3g087940 59.000 300 110 3 159 453 70 361 8.38e-114 339
MS.gene017753.t1 MTR_4g053250 49.025 359 160 5 102 453 119 461 2.23e-110 335
MS.gene017753.t1 MTR_7g092750 52.439 328 117 6 135 453 140 437 3.73e-107 325
MS.gene017753.t1 MTR_0126s0080 61.154 260 85 6 157 405 204 458 1.89e-101 311
MS.gene017753.t1 MTR_8g091650 51.351 296 130 4 163 453 70 356 1.37e-93 287
MS.gene017753.t1 MTR_8g091650 52.083 288 124 4 171 453 5 283 1.93e-93 284
MS.gene017753.t1 MTR_3g073560 47.353 340 156 5 128 451 13 345 3.70e-93 293
MS.gene017753.t1 MTR_8g091650 51.890 291 126 4 168 453 111 392 1.59e-92 285
MS.gene017753.t1 MTR_5g060950 51.568 287 128 3 168 450 67 346 3.41e-91 281
MS.gene017753.t1 MTR_3g044820 59.358 187 58 4 145 320 29 208 2.61e-72 227
MS.gene017753.t1 MTR_1g111320 36.571 175 92 4 59 231 54 211 1.05e-23 99.4
MS.gene017753.t1 MTR_1g090370 32.367 207 110 5 245 446 47 228 4.36e-21 92.0
MS.gene017753.t1 MTR_8g094690 27.126 247 140 5 229 441 8 248 2.21e-16 79.3
MS.gene017753.t1 MTR_2g076140 22.535 213 124 3 240 432 8 199 9.24e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017753.t1 AT3G12250 73.414 331 77 4 133 453 1 330 1.56e-168 477
MS.gene017753.t1 AT3G12250 73.414 331 77 4 133 453 1 330 1.56e-168 477
MS.gene017753.t1 AT3G12250 73.414 331 77 4 133 453 1 330 1.56e-168 477
MS.gene017753.t1 AT3G12250 73.414 331 77 4 133 453 1 330 1.56e-168 477
MS.gene017753.t1 AT5G06950 78.523 298 63 1 156 453 34 330 9.38e-167 472
MS.gene017753.t1 AT5G06950 78.523 298 63 1 156 453 34 330 9.38e-167 472
MS.gene017753.t1 AT5G06950 78.523 298 63 1 156 453 34 330 9.38e-167 472
MS.gene017753.t1 AT5G06950 78.523 298 63 1 156 453 34 330 9.38e-167 472
MS.gene017753.t1 AT5G06950 78.523 298 63 1 156 453 34 330 9.38e-167 472
MS.gene017753.t1 AT3G12250 77.852 298 65 1 156 453 7 303 1.54e-166 471
MS.gene017753.t1 AT3G12250 77.852 298 65 1 156 453 28 324 4.07e-166 471
MS.gene017753.t1 AT3G12250 77.852 298 65 1 156 453 59 355 6.55e-165 469
MS.gene017753.t1 AT5G06960 73.292 322 77 3 140 453 10 330 5.75e-155 442
MS.gene017753.t1 AT5G06960 73.292 322 77 3 140 453 10 330 5.75e-155 442
MS.gene017753.t1 AT5G06960 77.083 288 65 1 166 453 24 310 6.91e-155 441
MS.gene017753.t1 AT1G68640 70.103 291 84 2 165 453 163 452 7.11e-138 404
MS.gene017753.t1 AT1G08320 58.104 327 124 4 130 453 13 329 7.52e-128 375
MS.gene017753.t1 AT1G08320 58.104 327 124 4 130 453 13 329 7.52e-128 375
MS.gene017753.t1 AT1G08320 58.104 327 124 4 130 453 137 453 2.60e-126 375
MS.gene017753.t1 AT1G08320 58.104 327 124 4 130 453 137 453 2.60e-126 375
MS.gene017753.t1 AT1G08320 58.104 327 124 4 130 453 137 453 2.60e-126 375
MS.gene017753.t1 AT5G06839 56.954 302 117 3 165 453 115 416 4.01e-117 349
MS.gene017753.t1 AT5G06839 57.143 301 117 3 165 453 115 415 1.83e-116 348
MS.gene017753.t1 AT5G06839 57.143 301 117 3 165 453 158 458 1.92e-116 349
MS.gene017753.t1 AT5G10030 54.688 320 132 4 139 453 51 362 2.43e-113 338
MS.gene017753.t1 AT5G10030 54.688 320 132 4 139 453 51 362 2.43e-113 338
MS.gene017753.t1 AT5G10030 54.688 320 132 4 139 453 51 362 2.43e-113 338
MS.gene017753.t1 AT5G10030 54.688 320 132 4 139 453 51 362 2.43e-113 338
MS.gene017753.t1 AT5G10030 54.688 320 132 4 139 453 51 362 2.43e-113 338
MS.gene017753.t1 AT1G22070 56.393 305 124 3 153 453 83 382 4.23e-112 335
MS.gene017753.t1 AT5G65210 50.716 349 141 5 128 453 26 366 2.83e-109 328
MS.gene017753.t1 AT5G65210 50.716 349 141 5 128 453 26 366 2.83e-109 328
MS.gene017753.t1 AT5G65210 50.716 349 141 5 128 453 26 366 2.83e-109 328
MS.gene017753.t1 AT5G65210 50.716 349 141 5 128 453 26 366 2.83e-109 328
MS.gene017753.t1 AT5G65210 50.716 349 141 5 128 453 26 366 2.83e-109 328
MS.gene017753.t1 AT5G65210 50.716 349 141 5 128 453 26 366 2.83e-109 328
MS.gene017753.t1 AT5G65210 55.667 300 120 3 159 453 5 296 3.44e-109 325
MS.gene017753.t1 AT1G77920 49.046 367 155 6 89 453 30 366 5.06e-108 324
MS.gene017753.t1 AT1G58330 26.244 221 145 5 235 443 9 223 6.89e-15 74.3
MS.gene017753.t1 AT3G14880 24.675 231 131 5 228 432 1 214 2.15e-14 73.2
MS.gene017753.t1 AT3G14880 23.651 241 134 5 228 435 1 224 2.71e-13 70.1

Find 118 sgRNAs with CRISPR-Local

Find 257 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCTCGAATTTCTGATTT+TGG 0.114816 7.3:+19135964 MS.gene017753:CDS
ATCAACTGTTGTTCAGTTAA+AGG 0.191657 7.3:-19138357 None:intergenic
AAAAGACGCGCTGCCAAATT+TGG 0.207656 7.3:+19136599 MS.gene017753:CDS
CCAGATGTTGAAGCCAAATT+TGG 0.211263 7.3:-19136612 None:intergenic
AGCCATTTGTCCCATGTAAT+TGG 0.245079 7.3:-19138517 None:intergenic
CCAAATTTGGCTTCAACATC+TGG 0.245789 7.3:+19136612 MS.gene017753:CDS
CCCAACCCATCAGGTGCTTC+TGG 0.270597 7.3:+19138486 MS.gene017753:CDS
TTAGGTGCTGATATTCAATT+TGG 0.276431 7.3:+19136405 MS.gene017753:CDS
AACCTCTCTGCTGCAATTGC+TGG 0.307118 7.3:+19136555 MS.gene017753:CDS
GCTGTAGCTCTTGCTCTAGT+TGG 0.316242 7.3:-19137169 None:intergenic
GCAGCTTCTTGTAAGTCATT+TGG 0.321728 7.3:+19138332 MS.gene017753:intron
GATGGTTAGAAGAGCATAAT+AGG 0.327313 7.3:+19137950 MS.gene017753:CDS
CTGGCGGCCATCGTGAGAAT+TGG 0.336333 7.3:+19136631 MS.gene017753:CDS
TATTGCAGCCCTTAGTTCAT+TGG 0.346864 7.3:-19137977 None:intergenic
TCATGTGGATTGGAGGCTTT+CGG 0.349268 7.3:+19138151 MS.gene017753:CDS
TGGCGGCCATCGTGAGAATT+GGG 0.354181 7.3:+19136632 MS.gene017753:CDS
GGAATATTTATTTCAAGTAC+TGG 0.364580 7.3:+19137325 MS.gene017753:CDS
GAAAAGCCGACTGAGGAAAA+AGG 0.365804 7.3:+19137005 MS.gene017753:CDS
TACCATTTCCACTCATTGAA+TGG 0.377090 7.3:-19137357 None:intergenic
CATACTTCTGCTAAGATTCA+TGG 0.378386 7.3:-19136025 None:intergenic
TCGGTCATCTGAACTTCTTA+AGG 0.384806 7.3:+19138170 MS.gene017753:CDS
TTTAACTGAACAACAGTTGA+TGG 0.387147 7.3:+19138359 MS.gene017753:CDS
ATTTACATGGAATTATTAGA+TGG 0.388302 7.3:-19135120 None:intergenic
TCAATTTGGTGCTTTAAGTA+AGG 0.395237 7.3:+19136419 MS.gene017753:CDS
CTTTCCGAGACATTGGCTAA+TGG 0.402534 7.3:+19138459 MS.gene017753:CDS
CTCAAAATCGTGAAGCTGCC+AGG 0.414559 7.3:+19136983 MS.gene017753:CDS
AAAGCAAATAGCCAAGCTTT+AGG 0.415265 7.3:+19136387 MS.gene017753:CDS
TGCGAGCTCTGAGTTCTCTA+TGG 0.421587 7.3:+19139070 MS.gene017753:CDS
ACCCATTCAATGAGTGGAAA+TGG 0.422756 7.3:+19137355 MS.gene017753:CDS
GGAAAGCTTGGTACTCTTGA+GGG 0.428090 7.3:+19138549 MS.gene017753:CDS
CTGTAGCTCTTGCTCTAGTT+GGG 0.432408 7.3:-19137168 None:intergenic
GTTGCAACGTTTGCTGCCTC+AGG 0.435590 7.3:-19138975 None:intergenic
CTGCAATGCGTCCATTCCTT+GGG 0.435984 7.3:-19138430 None:intergenic
AAGAGCTCGAGCTGATTGTC+TGG 0.439976 7.3:-19139019 None:intergenic
CTCTATGGCTTGCACGGCCA+AGG 0.444992 7.3:+19139085 MS.gene017753:CDS
TTTGAAACAGTTTACTCCCT+TGG 0.445923 7.3:-19139102 None:intergenic
TGAAAGATCAAAAGACAAAT+CGG 0.446752 7.3:+19136864 MS.gene017753:CDS
TGGAAATGTGGCCAATTACA+TGG 0.448525 7.3:+19138506 MS.gene017753:CDS
GCTGCAATGCGTCCATTCCT+TGG 0.454033 7.3:-19138431 None:intergenic
ATAGGCAAACCAATGAACTA+AGG 0.455979 7.3:+19137968 MS.gene017753:CDS
CCAGAAGCACCTGATGGGTT+GGG 0.456476 7.3:-19138486 None:intergenic
GACACTAACAAGGTTGTTAA+CGG 0.458291 7.3:+19135078 MS.gene017753:CDS
ACCATTTCCACTCATTGAAT+GGG 0.458496 7.3:-19137356 None:intergenic
GCTACAGCGAGCACGCCAGC+AGG 0.459908 7.3:+19137184 MS.gene017753:CDS
AAAAGACAAATCGGATCAAA+AGG 0.461930 7.3:+19136873 MS.gene017753:CDS
TCCAGAAGCACCTGATGGGT+TGG 0.465437 7.3:-19138487 None:intergenic
CTCAATTTGAAGATATCTAC+AGG 0.469063 7.3:+19138052 MS.gene017753:CDS
GAAATCCTAGAGATTGTTCA+AGG 0.473552 7.3:-19135990 None:intergenic
ACCTCTCTGCTGCAATTGCT+GGG 0.478042 7.3:+19136556 MS.gene017753:CDS
CACATGAAACACCTCTCAGC+TGG 0.482882 7.3:-19138135 None:intergenic
GGGACAAATGGCTATGGCCA+TGG 0.486901 7.3:+19138527 MS.gene017753:CDS
GGCCAATTACATGGGACAAA+TGG 0.487544 7.3:+19138515 MS.gene017753:CDS
TGCAACAATTAGAGAGCAGC+AGG 0.488377 7.3:+19137135 MS.gene017753:CDS
AATGGTTCACCCAACCCATC+AGG 0.491558 7.3:+19138477 MS.gene017753:CDS
GAGAACTCAGAGCTCGCAGC+CGG 0.499226 7.3:-19139065 None:intergenic
GGAGCCCTTGAACAATCTCT+AGG 0.499416 7.3:+19135985 MS.gene017753:CDS
CTGCAATAAATTCTCATGCT+GGG 0.499442 7.3:+19137992 MS.gene017753:CDS
TTGGATTTCAGGGGCATGGA+GGG 0.504205 7.3:+19135928 MS.gene017753:intron
ACACTAACAAGGTTGTTAAC+GGG 0.504918 7.3:+19135079 MS.gene017753:CDS
AAACGTTGCAACAAATGCTT+CGG 0.506047 7.3:+19138986 MS.gene017753:CDS
GAGAGGTGTTTCATGTGGAT+TGG 0.507638 7.3:+19138141 MS.gene017753:CDS
TGTTCAGACGTTAAGACGGC+TGG 0.509648 7.3:+19136960 MS.gene017753:intron
GGTACAGTCCATTGCAAACT+CGG 0.515997 7.3:+19136527 MS.gene017753:intron
GCTGCAATAAATTCTCATGC+TGG 0.516591 7.3:+19137991 MS.gene017753:CDS
AGGTGTTTCATGTGGATTGG+AGG 0.518347 7.3:+19138144 MS.gene017753:CDS
GAATATCAGCACCTAAAGCT+TGG 0.527661 7.3:-19136398 None:intergenic
GGGAGAGTCCAACATGGCTG+AGG 0.529600 7.3:+19136653 MS.gene017753:CDS
GCAATCACTTTCCGAGACAT+TGG 0.530262 7.3:+19138452 MS.gene017753:CDS
GCTTTCATTTGATTAAACAC+TGG 0.536527 7.3:-19136369 None:intergenic
TACAGAAGACAAGAATCAAA+TGG 0.538000 7.3:+19136701 MS.gene017753:CDS
CAATAAGTGATTATTTCTCC+CGG 0.538111 7.3:+19139046 MS.gene017753:CDS
GCTATGGCCATGGGAAAGCT+TGG 0.544267 7.3:+19138537 MS.gene017753:CDS
TTAACTGAACAACAGTTGAT+GGG 0.552406 7.3:+19138360 MS.gene017753:CDS
GGACAAATGGCTATGGCCAT+GGG 0.556028 7.3:+19138528 MS.gene017753:CDS
AGACGCTCTTTCCCAAGGAA+TGG 0.556679 7.3:+19138419 MS.gene017753:CDS
GTTTATATCCGAGTTTGCAA+TGG 0.558175 7.3:-19136535 None:intergenic
GGGAAAGCTTGGTACTCTTG+AGG 0.558797 7.3:+19138548 MS.gene017753:CDS
ATCTCTAGGATTTCGTGTTG+AGG 0.565350 7.3:+19135999 MS.gene017753:CDS
TTAGATGGAGGTGCGTAGCT+CGG 0.566017 7.3:-19135105 None:intergenic
AGCGCTTCCCTCAGCCATGT+TGG 0.566699 7.3:-19136661 None:intergenic
ACATTTCCAGAAGCACCTGA+TGG 0.566763 7.3:-19138492 None:intergenic
GAAGATATCTACAGGCTGAA+AGG 0.567290 7.3:+19138060 MS.gene017753:CDS
TCCACATTCTATCAGGAATG+TGG 0.571375 7.3:+19138106 MS.gene017753:CDS
TCTTGAGGGATTTCTTCGCC+AGG 0.573076 7.3:+19138563 MS.gene017753:CDS
ATCAGGTGCTTCTGGAAATG+TGG 0.573606 7.3:+19138494 MS.gene017753:CDS
TGGTTATTGATGGGCAGTAG+AGG 0.574524 7.3:+19135042 None:intergenic
TACATGGAATTATTAGATGG+AGG 0.577181 7.3:-19135117 None:intergenic
TCTATGGCTTGCACGGCCAA+GGG 0.578391 7.3:+19139086 MS.gene017753:CDS
TAGGCAAACCAATGAACTAA+GGG 0.579382 7.3:+19137969 MS.gene017753:CDS
CATTTCCAGAAGCACCTGAT+GGG 0.580742 7.3:-19138491 None:intergenic
CAGCTGAGAGGTGTTTCATG+TGG 0.583907 7.3:+19138136 MS.gene017753:CDS
TGCAATAAATTCTCATGCTG+GGG 0.590748 7.3:+19137993 MS.gene017753:CDS
TCCACATTCCTGATAGAATG+TGG 0.593998 7.3:-19138107 None:intergenic
TTACATGGGACAAATGGCTA+TGG 0.598092 7.3:+19138521 MS.gene017753:CDS
AGAACTCAGAGCTCGCAGCC+GGG 0.599159 7.3:-19139064 None:intergenic
TGAAATTGTCGACAATGGTA+CGG 0.603907 7.3:-19138026 None:intergenic
TGAGTTCTCTATGGCTTGCA+CGG 0.606772 7.3:+19139079 MS.gene017753:CDS
GCTGAAGACGCTCTTTCCCA+AGG 0.608444 7.3:+19138414 MS.gene017753:CDS
GAGCAGACCCATTCAATGAG+TGG 0.614912 7.3:+19137349 MS.gene017753:CDS
GGAGAGTCCAACATGGCTGA+GGG 0.616774 7.3:+19136654 MS.gene017753:CDS
CCAAAATCAGAAATTCGAGA+AGG 0.617363 7.3:-19135964 None:intergenic
TGAACCATTAGCCAATGTCT+CGG 0.617863 7.3:-19138463 None:intergenic
GGCGGCCATCGTGAGAATTG+GGG 0.627011 7.3:+19136633 MS.gene017753:CDS
AAGAGTACCAAGCTTTCCCA+TGG 0.628858 7.3:-19138544 None:intergenic
GGAAATGTGGCCAATTACAT+GGG 0.630650 7.3:+19138507 MS.gene017753:CDS
AACTGCTGAGGACACTAACA+AGG 0.634040 7.3:+19135068 MS.gene017753:CDS
AATTTGGCTTCAACATCTGG+CGG 0.636343 7.3:+19136615 MS.gene017753:CDS
TTTGGATTTCAGGGGCATGG+AGG 0.641756 7.3:+19135927 MS.gene017753:intron
AGTCATGAAATTGTCGACAA+TGG 0.650887 7.3:-19138031 None:intergenic
CAGTAGAGGTAGAACTGCTG+AGG 0.651706 7.3:+19135056 MS.gene017753:CDS
ACCCAGCAATTGCAGCAGAG+AGG 0.653003 7.3:-19136557 None:intergenic
ACTCTCCCCAATTCTCACGA+TGG 0.657176 7.3:-19136638 None:intergenic
CTGCCAGGAAAAGCCGACTG+AGG 0.660519 7.3:+19136998 MS.gene017753:CDS
GTTTATAGGCTGATAACCTG+AGG 0.665954 7.3:+19138959 MS.gene017753:intron
AAATCCTAGAGATTGTTCAA+GGG 0.671979 7.3:-19135989 None:intergenic
TGTGGAAGACTCCAGCTGAG+AGG 0.690086 7.3:+19138124 MS.gene017753:CDS
GAATTGGGGAGAGTCCAACA+TGG 0.702168 7.3:+19136647 MS.gene017753:CDS
TTGATGCAGAATACGCACGA+TGG 0.731911 7.3:+19137932 MS.gene017753:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAACAACAAAAAAA+GGG - chr7.3:19136082-19136101 None:intergenic 10.0%
!!! TATCATTATTTACTTTTTTA+AGG - chr7.3:19136258-19136277 None:intergenic 10.0%
!! AAAAAAAACAACAAAAAAAG+GGG - chr7.3:19136081-19136100 None:intergenic 15.0%
!! AAGATGATATACAAATAAAT+AGG - chr7.3:19136343-19136362 None:intergenic 15.0%
!! AAGATTAACATTAAACAAAA+GGG - chr7.3:19135157-19135176 None:intergenic 15.0%
!! ATTTACAATTTAACAGAAAA+AGG - chr7.3:19137036-19137055 None:intergenic 15.0%
!! CAAAAAAAAACAACAAAAAA+AGG - chr7.3:19136083-19136102 None:intergenic 15.0%
!! TAAGATTAACATTAAACAAA+AGG - chr7.3:19135158-19135177 None:intergenic 15.0%
!!! GTTTTGTTTAAATTTATTGT+AGG + chr7.3:19135214-19135233 MS.gene017753:intron 15.0%
!!! TTGATAATTCTTAAATTTAG+AGG + chr7.3:19135423-19135442 MS.gene017753:intron 15.0%
!!! TTGATTATTTATCTTTTCTA+GGG + chr7.3:19137304-19137323 MS.gene017753:intron 15.0%
!!! TTGCAATTTATTGATTTTAT+TGG - chr7.3:19136457-19136476 None:intergenic 15.0%
!!! TTTGATTATTTATCTTTTCT+AGG + chr7.3:19137303-19137322 MS.gene017753:intron 15.0%
!! AAATATCTGTATATGTTAAG+AGG - chr7.3:19137625-19137644 None:intergenic 20.0%
!! ACAAAATGTTAAACATATGT+TGG - chr7.3:19135901-19135920 None:intergenic 20.0%
!! ATGAAAAAAGAAACATATCA+CGG - chr7.3:19137568-19137587 None:intergenic 20.0%
!! ATTGCTTTACTTTAATCATA+CGG + chr7.3:19136726-19136745 MS.gene017753:intron 20.0%
!! ATTTACATGGAATTATTAGA+TGG - chr7.3:19135123-19135142 None:intergenic 20.0%
!! CAAAAGCAAAATTTAACATA+TGG - chr7.3:19136942-19136961 None:intergenic 20.0%
!! CAAAATGTTAAACATATGTT+GGG - chr7.3:19135900-19135919 None:intergenic 20.0%
!! TAGAAATTATGCATGTTATT+GGG + chr7.3:19135296-19135315 MS.gene017753:intron 20.0%
!! TATACTCTTTATCACTTTAT+TGG - chr7.3:19138777-19138796 None:intergenic 20.0%
!!! AAGAGGTTTGATATTTTTAA+AGG - chr7.3:19137608-19137627 None:intergenic 20.0%
!!! ATGAACAAAGTTTTAAATTG+CGG + chr7.3:19135448-19135467 MS.gene017753:intron 20.0%
!!! GATATTTTTAAAGGAAATGT+TGG - chr7.3:19137599-19137618 None:intergenic 20.0%
!!! TGTTAGAACTTATTTTTAGT+CGG + chr7.3:19137663-19137682 MS.gene017753:intron 20.0%
!!! TTAACATTTTGTCATGATTT+TGG + chr7.3:19135909-19135928 MS.gene017753:intron 20.0%
! AAAGGAAAACAAAAGTGAAT+TGG - chr7.3:19138931-19138950 None:intergenic 25.0%
! AATAGCAATCTTCTATGAAA+AGG - chr7.3:19135746-19135765 None:intergenic 25.0%
! AATTAATTGTGTACCTTAGA+GGG + chr7.3:19138801-19138820 MS.gene017753:intron 25.0%
! ACAAATAAATAGGTTAATCG+TGG - chr7.3:19136333-19136352 None:intergenic 25.0%
! AGAAATTATGCATGTTATTG+GGG + chr7.3:19135297-19135316 MS.gene017753:intron 25.0%
! ATGATGTTGAATTGAAGTTA+GGG + chr7.3:19135324-19135343 MS.gene017753:intron 25.0%
! ATGTTAATCTTACTCTTGAT+TGG + chr7.3:19135166-19135185 MS.gene017753:intron 25.0%
! GTAGAAATTATGCATGTTAT+TGG + chr7.3:19135295-19135314 MS.gene017753:intron 25.0%
! GTTATGTTCTATGAAGTAAA+CGG - chr7.3:19135609-19135628 None:intergenic 25.0%
! TATGATGTTGAATTGAAGTT+AGG + chr7.3:19135323-19135342 MS.gene017753:intron 25.0%
! TGAAAGATCAAAAGACAAAT+CGG + chr7.3:19136864-19136883 MS.gene017753:CDS 25.0%
! TGACTATATAAACCATCTAA+AGG - chr7.3:19135242-19135261 None:intergenic 25.0%
!! CAAAAAGAAAAGAGCATATA+AGG - chr7.3:19135715-19135734 None:intergenic 25.0%
!! GGAATATTTATTTCAAGTAC+TGG + chr7.3:19137325-19137344 MS.gene017753:CDS 25.0%
!! TAACATTGAATTTAAAGCTG+TGG + chr7.3:19137485-19137504 MS.gene017753:intron 25.0%
!! TATATGCTCTTTTCTTTTTG+TGG + chr7.3:19135715-19135734 MS.gene017753:intron 25.0%
!!! AATGAAGATGGCTATTTTAT+TGG - chr7.3:19136812-19136831 None:intergenic 25.0%
!!! GATTAAGTGTTGGATTTTTA+AGG + chr7.3:19138255-19138274 MS.gene017753:intron 25.0%
!!! TAAACGGAAGTATTTTTACA+GGG - chr7.3:19135593-19135612 None:intergenic 25.0%
!!! TGGTCTTGCTATTAATTTTA+GGG + chr7.3:19135186-19135205 MS.gene017753:intron 25.0%
!!! TTGGTCTTGCTATTAATTTT+AGG + chr7.3:19135185-19135204 MS.gene017753:intron 25.0%
AAAAATTCCTCCAAGTAGAA+GGG - chr7.3:19137446-19137465 None:intergenic 30.0%
AAAAGACAAATCGGATCAAA+AGG + chr7.3:19136873-19136892 MS.gene017753:CDS 30.0%
AAATCCTAGAGATTGTTCAA+GGG - chr7.3:19135992-19136011 None:intergenic 30.0%
ATCAACTGTTGTTCAGTTAA+AGG - chr7.3:19138360-19138379 None:intergenic 30.0%
ATGCAAAATCCATTAACTCT+TGG + chr7.3:19137517-19137536 MS.gene017753:intron 30.0%
ATTCCATGTAAATTTGTCTG+AGG + chr7.3:19135130-19135149 MS.gene017753:intron 30.0%
ATTCTTCTTTCCATTCATTC+AGG + chr7.3:19137106-19137125 MS.gene017753:intron 30.0%
CAAAAACGTCAACACAATTT+AGG - chr7.3:19137892-19137911 None:intergenic 30.0%
CCATAGAGAATAAACAAATG+AGG - chr7.3:19138205-19138224 None:intergenic 30.0%
CCATGTTTCAAAGCTAAAAA+GGG - chr7.3:19135830-19135849 None:intergenic 30.0%
CCTCATTTGTTTATTCTCTA+TGG + chr7.3:19138202-19138221 MS.gene017753:intron 30.0%
CTCAAGATCTAACAACAAAT+CGG - chr7.3:19135794-19135813 None:intergenic 30.0%
CTCAATTTGAAGATATCTAC+AGG + chr7.3:19138052-19138071 MS.gene017753:CDS 30.0%
CTGCAAAACAAAAATGAAGA+TGG - chr7.3:19136824-19136843 None:intergenic 30.0%
GAAATAGACAGTTAATTACC+TGG - chr7.3:19138584-19138603 None:intergenic 30.0%
GAATTAATTGTGTACCTTAG+AGG + chr7.3:19138800-19138819 MS.gene017753:intron 30.0%
GATAACGATTGATTAAGTGT+TGG + chr7.3:19138245-19138264 MS.gene017753:intron 30.0%
GCTTTCATTTGATTAAACAC+TGG - chr7.3:19136372-19136391 None:intergenic 30.0%
GTCTTTAATCACACATATGA+TGG - chr7.3:19137757-19137776 None:intergenic 30.0%
GTTATTGAATGAAACTGTGT+CGG - chr7.3:19138670-19138689 None:intergenic 30.0%
TACAAACAAATGCAACAAGT+TGG - chr7.3:19136217-19136236 None:intergenic 30.0%
TACAGAAGACAAGAATCAAA+TGG + chr7.3:19136701-19136720 MS.gene017753:CDS 30.0%
TACATGGAATTATTAGATGG+AGG - chr7.3:19135120-19135139 None:intergenic 30.0%
TCCATGTTTCAAAGCTAAAA+AGG - chr7.3:19135831-19135850 None:intergenic 30.0%
TGAAACATGGATTTCATCAT+TGG + chr7.3:19135840-19135859 MS.gene017753:intron 30.0%
TTAACTGAACAACAGTTGAT+GGG + chr7.3:19138360-19138379 MS.gene017753:CDS 30.0%
TTACTTCATAGAACATAACG+CGG + chr7.3:19135610-19135629 MS.gene017753:intron 30.0%
TTATCAGCCTATAAACATGA+AGG - chr7.3:19138955-19138974 None:intergenic 30.0%
TTTAACTGAACAACAGTTGA+TGG + chr7.3:19138359-19138378 MS.gene017753:CDS 30.0%
! AATGCTGTTGATGCTTTTAT+AGG + chr7.3:19135505-19135524 MS.gene017753:intron 30.0%
! GTTATTCGTACATCTAAAAC+TGG + chr7.3:19138297-19138316 MS.gene017753:intron 30.0%
! TATCTCAACTTCCTTCTTTT+TGG + chr7.3:19138606-19138625 MS.gene017753:intron 30.0%
! TCCTTTTCCTTCATGTTTAT+AGG + chr7.3:19138945-19138964 MS.gene017753:intron 30.0%
! TGTCATGATTTTGGATTTCA+GGG + chr7.3:19135918-19135937 MS.gene017753:intron 30.0%
! TTCTACTTGGAGGAATTTTT+CGG + chr7.3:19137446-19137465 MS.gene017753:intron 30.0%
! TTGTCATGATTTTGGATTTC+AGG + chr7.3:19135917-19135936 MS.gene017753:intron 30.0%
! TTTGTCTTTTGATCTTTCAC+TGG - chr7.3:19136863-19136882 None:intergenic 30.0%
!! CTAAATTGTGTTGACGTTTT+TGG + chr7.3:19137890-19137909 MS.gene017753:intron 30.0%
!! TCAATTTGGTGCTTTAAGTA+AGG + chr7.3:19136419-19136438 MS.gene017753:CDS 30.0%
!! TCTTTGTTGCTATTTCATTC+TGG + chr7.3:19137256-19137275 MS.gene017753:intron 30.0%
!! TTAGGTGCTGATATTCAATT+TGG + chr7.3:19136405-19136424 MS.gene017753:CDS 30.0%
!!! AGAGTTAATGGATTTTGCAT+TGG - chr7.3:19137517-19137536 None:intergenic 30.0%
!!! GGTCTTGCTATTAATTTTAG+GGG + chr7.3:19135187-19135206 MS.gene017753:intron 30.0%
!!! GTAAACGGAAGTATTTTTAC+AGG - chr7.3:19135594-19135613 None:intergenic 30.0%
!!! TACTTTTTTAAGGACTTCTC+TGG - chr7.3:19136248-19136267 None:intergenic 30.0%
AAACGTTGCAACAAATGCTT+CGG + chr7.3:19138986-19139005 MS.gene017753:CDS 35.0%
AAAGCAAATAGCCAAGCTTT+AGG + chr7.3:19136387-19136406 MS.gene017753:CDS 35.0%
AAATAGCAAAACAAACCTGC+TGG - chr7.3:19137202-19137221 None:intergenic 35.0%
ACACTAACAAGGTTGTTAAC+GGG + chr7.3:19135079-19135098 MS.gene017753:CDS 35.0%
ACCATTTCCACTCATTGAAT+GGG - chr7.3:19137359-19137378 None:intergenic 35.0%
AGGTTAATCGTGGATTCATA+AGG - chr7.3:19136323-19136342 None:intergenic 35.0%
AGTATAAGCACTAAGAACAC+AGG - chr7.3:19136146-19136165 None:intergenic 35.0%
AGTCATGAAATTGTCGACAA+TGG - chr7.3:19138034-19138053 None:intergenic 35.0%
ATAGGCAAACCAATGAACTA+AGG + chr7.3:19137968-19137987 MS.gene017753:CDS 35.0%
CATACGGTTTATTCTGAATC+TGG + chr7.3:19136742-19136761 MS.gene017753:intron 35.0%
CATACTTCTGCTAAGATTCA+TGG - chr7.3:19136028-19136047 None:intergenic 35.0%
CATGAAAAAAATTGATGCCG+TGG + chr7.3:19135532-19135551 MS.gene017753:intron 35.0%
CCAAAATCAGAAATTCGAGA+AGG - chr7.3:19135967-19135986 None:intergenic 35.0%
CTGCAATAAATTCTCATGCT+GGG + chr7.3:19137992-19138011 MS.gene017753:CDS 35.0%
CTTGATATTGGAGAGAATTG+CGG + chr7.3:19135479-19135498 MS.gene017753:intron 35.0%
GAAAAATTCCTCCAAGTAGA+AGG - chr7.3:19137447-19137466 None:intergenic 35.0%
GAAAATAGTAGTCTGTAGCA+TGG + chr7.3:19137826-19137845 MS.gene017753:intron 35.0%
GAAATCCTAGAGATTGTTCA+AGG - chr7.3:19135993-19136012 None:intergenic 35.0%
GAATTGAAGTTAGGGTCTAT+TGG + chr7.3:19135332-19135351 MS.gene017753:intron 35.0%
GACACTAACAAGGTTGTTAA+CGG + chr7.3:19135078-19135097 MS.gene017753:CDS 35.0%
GCCTATAAACATGAAGGAAA+AGG - chr7.3:19138949-19138968 None:intergenic 35.0%
GTTTATATCCGAGTTTGCAA+TGG - chr7.3:19136538-19136557 None:intergenic 35.0%
TACCATTTCCACTCATTGAA+TGG - chr7.3:19137360-19137379 None:intergenic 35.0%
TAGGCAAACCAATGAACTAA+GGG + chr7.3:19137969-19137988 MS.gene017753:CDS 35.0%
TCTTCACTTGCATGTATGTA+CGG + chr7.3:19136506-19136525 MS.gene017753:intron 35.0%
TGAAATTGTCGACAATGGTA+CGG - chr7.3:19138029-19138048 None:intergenic 35.0%
TGCAATAAATTCTCATGCTG+GGG + chr7.3:19137993-19138012 MS.gene017753:CDS 35.0%
TTATTGTAGGTGCCTTTAGA+TGG + chr7.3:19135227-19135246 MS.gene017753:intron 35.0%
TTTGTCAAGCCAAGAGTTAA+TGG - chr7.3:19137529-19137548 None:intergenic 35.0%
! CCTTCTCGAATTTCTGATTT+TGG + chr7.3:19135964-19135983 MS.gene017753:CDS 35.0%
! CTTTTGTTCAGACGTTAAGA+CGG + chr7.3:19136956-19136975 MS.gene017753:intron 35.0%
! GATGGTTAGAAGAGCATAAT+AGG + chr7.3:19137950-19137969 MS.gene017753:CDS 35.0%
! GATGTTTTCCACATTCTATC+AGG + chr7.3:19138099-19138118 MS.gene017753:CDS 35.0%
! GTCATGATTTTGGATTTCAG+GGG + chr7.3:19135919-19135938 MS.gene017753:intron 35.0%
!!! CCCTTTTTAGCTTTGAAACA+TGG + chr7.3:19135827-19135846 MS.gene017753:intron 35.0%
!!! TTTTGTTTTGCAGCCTGAAA+GGG + chr7.3:19136831-19136850 MS.gene017753:intron 35.0%
!!! TTTTTGTTTTGCAGCCTGAA+AGG + chr7.3:19136830-19136849 MS.gene017753:intron 35.0%
AAGCTAAAAAGGGTCCAACA+TGG - chr7.3:19135820-19135839 None:intergenic 40.0%
ACATATCACGGCAAATGTCA+TGG - chr7.3:19137556-19137575 None:intergenic 40.0%
ACCCATTCAATGAGTGGAAA+TGG + chr7.3:19137355-19137374 MS.gene017753:CDS 40.0%
AGCCATTTGTCCCATGTAAT+TGG - chr7.3:19138520-19138539 None:intergenic 40.0%
ATAGTAGTCTGTAGCATGGA+TGG + chr7.3:19137830-19137849 MS.gene017753:intron 40.0%
CCAGATGTTGAAGCCAAATT+TGG - chr7.3:19136615-19136634 None:intergenic 40.0%
CGCAATTCTCTCCAATATCA+AGG - chr7.3:19135481-19135500 None:intergenic 40.0%
GAAAAAAATTGATGCCGTGG+TGG + chr7.3:19135535-19135554 MS.gene017753:intron 40.0%
GAAGATATCTACAGGCTGAA+AGG + chr7.3:19138060-19138079 MS.gene017753:CDS 40.0%
GAATATCAGCACCTAAAGCT+TGG - chr7.3:19136401-19136420 None:intergenic 40.0%
GCAGCTTCTTGTAAGTCATT+TGG + chr7.3:19138332-19138351 MS.gene017753:intron 40.0%
GCGGATACTTACCTTGATAT+TGG + chr7.3:19135467-19135486 MS.gene017753:intron 40.0%
GCTGCAATAAATTCTCATGC+TGG + chr7.3:19137991-19138010 MS.gene017753:CDS 40.0%
GGAAATGTGGCCAATTACAT+GGG + chr7.3:19138507-19138526 MS.gene017753:CDS 40.0%
GGATACACGGTATACAACAA+CGG - chr7.3:19138700-19138719 None:intergenic 40.0%
GGTCCTCAGACAAATTTACA+TGG - chr7.3:19135136-19135155 None:intergenic 40.0%
GTTTATAGGCTGATAACCTG+AGG + chr7.3:19138959-19138978 MS.gene017753:intron 40.0%
TACAGACACAAACACGACAA+CGG - chr7.3:19138726-19138745 None:intergenic 40.0%
TAGATCTTGAGCATCCATGT+TGG + chr7.3:19135803-19135822 MS.gene017753:intron 40.0%
TATTGCAGCCCTTAGTTCAT+TGG - chr7.3:19137980-19137999 None:intergenic 40.0%
TCCACATTCCTGATAGAATG+TGG - chr7.3:19138110-19138129 None:intergenic 40.0%
TCCACATTCTATCAGGAATG+TGG + chr7.3:19138106-19138125 MS.gene017753:CDS 40.0%
TCGGTCATCTGAACTTCTTA+AGG + chr7.3:19138170-19138189 MS.gene017753:CDS 40.0%
TGAACCATTAGCCAATGTCT+CGG - chr7.3:19138466-19138485 None:intergenic 40.0%
TGCACATATGCCTGAATGAA+TGG - chr7.3:19137119-19137138 None:intergenic 40.0%
TGGAAATGTGGCCAATTACA+TGG + chr7.3:19138506-19138525 MS.gene017753:CDS 40.0%
TGTTTCTTCTGCATGCAATC+TGG + chr7.3:19137068-19137087 MS.gene017753:intron 40.0%
TTACATGGGACAAATGGCTA+TGG + chr7.3:19138521-19138540 MS.gene017753:CDS 40.0%
! AATTTGGCTTCAACATCTGG+CGG + chr7.3:19136615-19136634 MS.gene017753:CDS 40.0%
! ACATGCAAGTGAAGAGTGTA+AGG - chr7.3:19136501-19136520 None:intergenic 40.0%
! AGAAGTATGTCGCTCACATT+TGG + chr7.3:19136039-19136058 MS.gene017753:intron 40.0%
! CCAAATTTGGCTTCAACATC+TGG + chr7.3:19136612-19136631 MS.gene017753:CDS 40.0%
! CTCAACTTCCTTCTTTTTGG+AGG + chr7.3:19138609-19138628 MS.gene017753:intron 40.0%
!! ATCTCTAGGATTTCGTGTTG+AGG + chr7.3:19135999-19136018 MS.gene017753:CDS 40.0%
!!! TTTGTTTTGCAGCCTGAAAG+GGG + chr7.3:19136832-19136851 MS.gene017753:intron 40.0%
AAAAGACGCGCTGCCAAATT+TGG + chr7.3:19136599-19136618 MS.gene017753:CDS 45.0%
AACTGCTGAGGACACTAACA+AGG + chr7.3:19135068-19135087 MS.gene017753:CDS 45.0%
AATAGTTGTTCCCCTCTCGA+TGG + chr7.3:19136295-19136314 MS.gene017753:intron 45.0%
ACACAAACACGACAACGGAA+TGG - chr7.3:19138721-19138740 None:intergenic 45.0%
ACGACAACGGAATGGATACA+CGG - chr7.3:19138713-19138732 None:intergenic 45.0%
ATTCATAAGGCTCCATCGAG+AGG - chr7.3:19136310-19136329 None:intergenic 45.0%
CTGTAGCTCTTGCTCTAGTT+GGG - chr7.3:19137171-19137190 None:intergenic 45.0%
GAAAAGCCGACTGAGGAAAA+AGG + chr7.3:19137005-19137024 MS.gene017753:CDS 45.0%
GCAATCACTTTCCGAGACAT+TGG + chr7.3:19138452-19138471 MS.gene017753:CDS 45.0%
GCATCAAAGTCCCTTCTACT+TGG + chr7.3:19137433-19137452 MS.gene017753:intron 45.0%
GGAAAGCTTGGTACTCTTGA+GGG + chr7.3:19138549-19138568 MS.gene017753:CDS 45.0%
GGCCAATTACATGGGACAAA+TGG + chr7.3:19138515-19138534 MS.gene017753:CDS 45.0%
GGTACAGTCCATTGCAAACT+CGG + chr7.3:19136527-19136546 MS.gene017753:intron 45.0%
GTAATGCATCTCACCCTCTA+AGG - chr7.3:19138817-19138836 None:intergenic 45.0%
TCAAAGTCCCTTCTACTTGG+AGG + chr7.3:19137436-19137455 MS.gene017753:intron 45.0%
TCAAGCTTGCGTCACACAAT+TGG - chr7.3:19137401-19137420 None:intergenic 45.0%
TGCAACAATTAGAGAGCAGC+AGG + chr7.3:19137135-19137154 MS.gene017753:CDS 45.0%
TTCATAAGGCTCCATCGAGA+GGG - chr7.3:19136309-19136328 None:intergenic 45.0%
TTGATGCAGAATACGCACGA+TGG + chr7.3:19137932-19137951 MS.gene017753:CDS 45.0%
! ATCAGGTGCTTCTGGAAATG+TGG + chr7.3:19138494-19138513 MS.gene017753:CDS 45.0%
! CTTTCCGAGACATTGGCTAA+TGG + chr7.3:19138459-19138478 MS.gene017753:CDS 45.0%
! GATTTTGGATTTCAGGGGCA+TGG + chr7.3:19135924-19135943 MS.gene017753:intron 45.0%
! GCTGTACCTTTTTCCTCAGT+CGG - chr7.3:19137014-19137033 None:intergenic 45.0%
! TGAGTTCTCTATGGCTTGCA+CGG + chr7.3:19139079-19139098 MS.gene017753:CDS 45.0%
! TTAGGGTCTATTGGTTGCAG+AGG + chr7.3:19135341-19135360 MS.gene017753:intron 45.0%
!! AAGAGTACCAAGCTTTCCCA+TGG - chr7.3:19138547-19138566 None:intergenic 45.0%
!! ACATTTCCAGAAGCACCTGA+TGG - chr7.3:19138495-19138514 None:intergenic 45.0%
!! AGGTGTTTCATGTGGATTGG+AGG + chr7.3:19138144-19138163 MS.gene017753:CDS 45.0%
!! CATTTCCAGAAGCACCTGAT+GGG - chr7.3:19138494-19138513 None:intergenic 45.0%
!! GAGAGGTGTTTCATGTGGAT+TGG + chr7.3:19138141-19138160 MS.gene017753:CDS 45.0%
!! TCATGTGGATTGGAGGCTTT+CGG + chr7.3:19138151-19138170 MS.gene017753:CDS 45.0%
!! TTGTTTTGCAGCCTGAAAGG+GGG + chr7.3:19136833-19136852 MS.gene017753:intron 45.0%
!! TTTTTGGTGTGCAGGTGCAA+TGG + chr7.3:19137906-19137925 MS.gene017753:intron 45.0%
!!! TGTTGACGTTTTTGGTGTGC+AGG + chr7.3:19137898-19137917 MS.gene017753:intron 45.0%
AACCTCTCTGCTGCAATTGC+TGG + chr7.3:19136555-19136574 MS.gene017753:CDS 50.0%
AAGAGCTCGAGCTGATTGTC+TGG - chr7.3:19139022-19139041 None:intergenic 50.0%
AATGGTTCACCCAACCCATC+AGG + chr7.3:19138477-19138496 MS.gene017753:CDS 50.0%
ACCTCTCTGCTGCAATTGCT+GGG + chr7.3:19136556-19136575 MS.gene017753:CDS 50.0%
ACTCTCCCCAATTCTCACGA+TGG - chr7.3:19136641-19136660 None:intergenic 50.0%
AGACGCTCTTTCCCAAGGAA+TGG + chr7.3:19138419-19138438 MS.gene017753:CDS 50.0%
AGCTTGCGTCACACAATTGG+AGG - chr7.3:19137398-19137417 None:intergenic 50.0%
CACATGAAACACCTCTCAGC+TGG - chr7.3:19138138-19138157 None:intergenic 50.0%
CACTCACACATGTCGAACAC+CGG - chr7.3:19138640-19138659 None:intergenic 50.0%
CAGTAGAGGTAGAACTGCTG+AGG + chr7.3:19135056-19135075 MS.gene017753:CDS 50.0%
CTCAAAATCGTGAAGCTGCC+AGG + chr7.3:19136983-19137002 MS.gene017753:CDS 50.0%
CTGCAATGCGTCCATTCCTT+GGG - chr7.3:19138433-19138452 None:intergenic 50.0%
GAATTGGGGAGAGTCCAACA+TGG + chr7.3:19136647-19136666 MS.gene017753:CDS 50.0%
GAGCAGACCCATTCAATGAG+TGG + chr7.3:19137349-19137368 MS.gene017753:CDS 50.0%
GCTGTAGCTCTTGCTCTAGT+TGG - chr7.3:19137172-19137191 None:intergenic 50.0%
GGACAAATGGCTATGGCCAT+GGG + chr7.3:19138528-19138547 MS.gene017753:CDS 50.0%
GGAGCCCTTGAACAATCTCT+AGG + chr7.3:19135985-19136004 MS.gene017753:CDS 50.0%
GGGAAAGCTTGGTACTCTTG+AGG + chr7.3:19138548-19138567 MS.gene017753:CDS 50.0%
TCATAAGGCTCCATCGAGAG+GGG - chr7.3:19136308-19136327 None:intergenic 50.0%
TCTTGAGGGATTTCTTCGCC+AGG + chr7.3:19138563-19138582 MS.gene017753:CDS 50.0%
TGTTCAGACGTTAAGACGGC+TGG + chr7.3:19136960-19136979 MS.gene017753:intron 50.0%
! TGGTTGCAGAGGAAAGTGTG+TGG + chr7.3:19135352-19135371 MS.gene017753:intron 50.0%
! TGTTTTGCAGCCTGAAAGGG+GGG + chr7.3:19136834-19136853 MS.gene017753:intron 50.0%
! TTAGATGGAGGTGCGTAGCT+CGG - chr7.3:19135108-19135127 None:intergenic 50.0%
! TTGCAGAGGAAAGTGTGTGG+TGG + chr7.3:19135355-19135374 MS.gene017753:intron 50.0%
! TTGGATTTCAGGGGCATGGA+GGG + chr7.3:19135928-19135947 MS.gene017753:intron 50.0%
! TTTGGATTTCAGGGGCATGG+AGG + chr7.3:19135927-19135946 MS.gene017753:intron 50.0%
!! CAGCTGAGAGGTGTTTCATG+TGG + chr7.3:19138136-19138155 MS.gene017753:CDS 50.0%
!! CTTCTTTTTGGAGGCGTGTC+CGG + chr7.3:19138618-19138637 MS.gene017753:intron 50.0%
!! TGCGAGCTCTGAGTTCTCTA+TGG + chr7.3:19139070-19139089 MS.gene017753:CDS 50.0%
!! TTTCCTCAGTCGGCTTTTCC+TGG - chr7.3:19137004-19137023 None:intergenic 50.0%
ACCCAGCAATTGCAGCAGAG+AGG - chr7.3:19136560-19136579 None:intergenic 55.0%
ACTGACAATTCGCGTCAGCG+AGG - chr7.3:19135649-19135668 None:intergenic 55.0%
CGGACACGCCTCCAAAAAGA+AGG - chr7.3:19138620-19138639 None:intergenic 55.0%
GCTATGGCCATGGGAAAGCT+TGG + chr7.3:19138537-19138556 MS.gene017753:CDS 55.0%
GCTGAAGACGCTCTTTCCCA+AGG + chr7.3:19138414-19138433 MS.gene017753:CDS 55.0%
GCTGCAATGCGTCCATTCCT+TGG - chr7.3:19138434-19138453 None:intergenic 55.0%
GGAGAGTCCAACATGGCTGA+GGG + chr7.3:19136654-19136673 MS.gene017753:CDS 55.0%
GGGACAAATGGCTATGGCCA+TGG + chr7.3:19138527-19138546 MS.gene017753:CDS 55.0%
TCACTGGATTCCCCCCTTTC+AGG - chr7.3:19136847-19136866 None:intergenic 55.0%
TGCCGTGGTGGCACAAATCA+CGG + chr7.3:19135547-19135566 MS.gene017753:intron 55.0%
TGGCGGCCATCGTGAGAATT+GGG + chr7.3:19136632-19136651 MS.gene017753:CDS 55.0%
TGTGGAAGACTCCAGCTGAG+AGG + chr7.3:19138124-19138143 MS.gene017753:CDS 55.0%
! GACCGTGATTTGTGCCACCA+CGG - chr7.3:19135552-19135571 None:intergenic 55.0%
! GTTGCAACGTTTGCTGCCTC+AGG - chr7.3:19138978-19138997 None:intergenic 55.0%
! TCTATGGCTTGCACGGCCAA+GGG + chr7.3:19139086-19139105 MS.gene017753:CDS 55.0%
!! CCAGAAGCACCTGATGGGTT+GGG - chr7.3:19138489-19138508 None:intergenic 55.0%
!! TCCAGAAGCACCTGATGGGT+TGG - chr7.3:19138490-19138509 None:intergenic 55.0%
AGAACTCAGAGCTCGCAGCC+GGG - chr7.3:19139067-19139086 None:intergenic 60.0%
AGCGCTTCCCTCAGCCATGT+TGG - chr7.3:19136664-19136683 None:intergenic 60.0%
CCCAACCCATCAGGTGCTTC+TGG + chr7.3:19138486-19138505 MS.gene017753:CDS 60.0%
CTGCCAGGAAAAGCCGACTG+AGG + chr7.3:19136998-19137017 MS.gene017753:CDS 60.0%
CTGGCGGCCATCGTGAGAAT+TGG + chr7.3:19136631-19136650 MS.gene017753:CDS 60.0%
GAGAACTCAGAGCTCGCAGC+CGG - chr7.3:19139068-19139087 None:intergenic 60.0%
GGCGGCCATCGTGAGAATTG+GGG + chr7.3:19136633-19136652 MS.gene017753:CDS 60.0%
GGGAGAGTCCAACATGGCTG+AGG + chr7.3:19136653-19136672 MS.gene017753:CDS 60.0%
! CTCTATGGCTTGCACGGCCA+AGG + chr7.3:19139085-19139104 MS.gene017753:CDS 60.0%
GCTACAGCGAGCACGCCAGC+AGG + chr7.3:19137184-19137203 MS.gene017753:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 19135051 19139113 19135051 ID=MS.gene017753
chr7.3 mRNA 19135051 19139113 19135051 ID=MS.gene017753.t1;Parent=MS.gene017753
chr7.3 exon 19135051 19135136 19135051 ID=MS.gene017753.t1.exon1;Parent=MS.gene017753.t1
chr7.3 CDS 19135051 19135136 19135051 ID=cds.MS.gene017753.t1;Parent=MS.gene017753.t1
chr7.3 exon 19135939 19136042 19135939 ID=MS.gene017753.t1.exon2;Parent=MS.gene017753.t1
chr7.3 CDS 19135939 19136042 19135939 ID=cds.MS.gene017753.t1;Parent=MS.gene017753.t1
chr7.3 exon 19136367 19136440 19136367 ID=MS.gene017753.t1.exon3;Parent=MS.gene017753.t1
chr7.3 CDS 19136367 19136440 19136367 ID=cds.MS.gene017753.t1;Parent=MS.gene017753.t1
chr7.3 exon 19136534 19136722 19136534 ID=MS.gene017753.t1.exon4;Parent=MS.gene017753.t1
chr7.3 CDS 19136534 19136722 19136534 ID=cds.MS.gene017753.t1;Parent=MS.gene017753.t1
chr7.3 exon 19136844 19136894 19136844 ID=MS.gene017753.t1.exon5;Parent=MS.gene017753.t1
chr7.3 CDS 19136844 19136894 19136844 ID=cds.MS.gene017753.t1;Parent=MS.gene017753.t1
chr7.3 exon 19136967 19137026 19136967 ID=MS.gene017753.t1.exon6;Parent=MS.gene017753.t1
chr7.3 CDS 19136967 19137026 19136967 ID=cds.MS.gene017753.t1;Parent=MS.gene017753.t1
chr7.3 exon 19137128 19137205 19137128 ID=MS.gene017753.t1.exon7;Parent=MS.gene017753.t1
chr7.3 CDS 19137128 19137205 19137128 ID=cds.MS.gene017753.t1;Parent=MS.gene017753.t1
chr7.3 exon 19137325 19137376 19137325 ID=MS.gene017753.t1.exon8;Parent=MS.gene017753.t1
chr7.3 CDS 19137325 19137376 19137325 ID=cds.MS.gene017753.t1;Parent=MS.gene017753.t1
chr7.3 exon 19137920 19138191 19137920 ID=MS.gene017753.t1.exon9;Parent=MS.gene017753.t1
chr7.3 CDS 19137920 19138191 19137920 ID=cds.MS.gene017753.t1;Parent=MS.gene017753.t1
chr7.3 exon 19138336 19138584 19138336 ID=MS.gene017753.t1.exon10;Parent=MS.gene017753.t1
chr7.3 CDS 19138336 19138584 19138336 ID=cds.MS.gene017753.t1;Parent=MS.gene017753.t1
chr7.3 exon 19138967 19139113 19138967 ID=MS.gene017753.t1.exon11;Parent=MS.gene017753.t1
chr7.3 CDS 19138967 19139113 19138967 ID=cds.MS.gene017753.t1;Parent=MS.gene017753.t1
Gene Sequence

>MS.gene017753

ATGGGCAGTAGAGGTAGAACTGCTGAGGACACTAACAAGGTTGTTAACGGGATGCCGAGCTACGCACCTCCATCTAATAATTCCATGTAAATTTGTCTGAGGACCCTTTTGTTTAATGTTAATCTTACTCTTGATTGGTCTTGCTATTAATTTTAGGGGTAAAGTTTTGTTTAAATTTATTGTAGGTGCCTTTAGATGGTTTATATAGTCAATATAGTATTTTAGTATATGTGTTATGTAACTAGTAGAAATTATGCATGTTATTGGGGAGATATGATGTTGAATTGAAGTTAGGGTCTATTGGTTGCAGAGGAAAGTGTGTGGTGGAAATGATAAAAAGTGTTATATGTTGATTTTATTGTTTATTAATTATTGATAATTCTTAAATTTAGAGGAGATGAACAAAGTTTTAAATTGCGGATACTTACCTTGATATTGGAGAGAATTGCGGTCAAATGCTGTTGATGCTTTTATAGGAAAACATGAAAAAAATTGATGCCGTGGTGGCACAAATCACGGTCGCAGATCTAACTTTAAAACCCTGTAAAAATACTTCCGTTTACTTCATAGAACATAACGCGGCTAACTCGTCGTTCCTCGCTGACGCGAATTGTCAGTTTTTTCAGATTCTTCTAATTCTTGAAAGTTGAGACGATACAAACCTTATATGCTCTTTTCTTTTTGTGGCTTTACCTTTTCATAGAAGATTGCTATTGCTTTTCATGTTCATATGCTTCTTGCCGATTTGTTGTTAGATCTTGAGCATCCATGTTGGACCCTTTTTAGCTTTGAAACATGGATTTCATCATTGGCTGCATGTAGTTATGATTTATTCTTGAATATGCACCCAACATATGTTTAACATTTTGTCATGATTTTGGATTTCAGGGGCATGGAGGGAACTAATATTCATCCTTCTCGAATTTCTGATTTTGGAGCCCTTGAACAATCTCTAGGATTTCGTGTTGAGGATGCCATGAATCTTAGCAGAAGTATGTCGCTCACATTTGGATCTCTAGCAGTTTTACCCCTTTTTTTGTTGTTTTTTTTTGCTTTGCTGTGAACTTTTGTTTTATTAATTTAATATGCTGTCCTGTGTTCTTAGTGCTTATACTGTCACACTTGCATATCGTTAATCGTTGTGTATTAAAAACAGAAGATATCCAACTTGTTGCATTTGTTTGTAATTTGCTGCCAGAGAAGTCCTTAAAAAAGTAAATAATGATAGAAATACATGCTATTAGAATAGTTGTTCCCCTCTCGATGGAGCCTTATGAATCCACGATTAACCTATTTATTTGTATATCATCTTTCAGATCCAGTGTTTAATCAAATGAAAGCAAATAGCCAAGCTTTAGGTGCTGATATTCAATTTGGTGCTTTAAGTAAGGTAAAATTGTATTCCAATAAAATCAATAAATTGCAAAAGTGTAAATGAATTTCTGAACCTTACACTCTTCACTTGCATGTATGTACGGTACAGTCCATTGCAAACTCGGATATAAACCTCTCTGCTGCAATTGCTGGGTCTCAGACATTGCAATTACAAAAAGACGCGCTGCCAAATTTGGCTTCAACATCTGGCGGCCATCGTGAGAATTGGGGAGAGTCCAACATGGCTGAGGGAAGCGCTGATACTTCAACAGATGATACAGAAGACAAGAATCAAATGGTGATTGCTTTACTTTAATCATACGGTTTATTCTGAATCTGGAATTTAATTTATTCAAACAGTCAAAAGCATGTTTTTTTCATACTCCAATAAAATAGCCATCTTCATTTTTGTTTTGCAGCCTGAAAGGGGGGAATCCAGTGAAAGATCAAAAGACAAATCGGATCAAAAGGTTATATAATGTAATTATATTCACATAAACATTAGCATTTGTTACCATATGTTAAATTTTGCTTTTGTTCAGACGTTAAGACGGCTGGCTCAAAATCGTGAAGCTGCCAGGAAAAGCCGACTGAGGAAAAAGGTACAGCCTTTTTCTGTTAAATTGTAAATGAACTTGTAAATTGTTTCTTCTGCATGCAATCTGGTTAGTAATTTTGTAAATTCTTCTTTCCATTCATTCAGGCATATGTGCAACAATTAGAGAGCAGCAGGCTGAAACTAACCCAACTAGAGCAAGAGCTACAGCGAGCACGCCAGCAGGTTTGTTTTGCTATTTTATTCACTATTCGTGATTCAAATTCTGATACTTATCTTTGTTGCTATTTCATTCTGGTTATGTTACTATGTTATTTGATGATTTGATTATTTATCTTTTCTAGGGAATATTTATTTCAAGTACTGGAGAGCAGACCCATTCAATGAGTGGAAATGGTATTTAATCTTCTTTTACCTCCAATTGTGTGACGCAAGCTTGAAATTTGTTAATTGCATCAAAGTCCCTTCTACTTGGAGGAATTTTTCGGTGACTTTTGAGTCTGATAACATTGAATTTAAAGCTGTGGCTATAGCCAATGCAAAATCCATTAACTCTTGGCTTGACAAATGCTCCATGACATTTGCCGTGATATGTTTCTTTTTTCATGAAAGAATCCAACATTTCCTTTAAAAATATCAAACCTCTTAACATATACAGATATTTCAACTTGTTCAATATGCTTGTTAGAACTTATTTTTAGTCGGTAAGTGCAAGCATGTGCTATGATTTTGAACTATAGTTTAACTTTTTATACATTGACAACAAATCACAACCATCATATGTGTGATTAAAGACAAGTCTTTACGCTGACAGTGCATATGAACTAAATCATTTTCAACTATGAGAAAATAGTAGTCTGTAGCATGGATGGACAGACTTTTACTGTAGTTTGTGCTGTGTTTCAGAACCTAAATTGTGTTGACGTTTTTGGTGTGCAGGTGCAATGGCATTTGATGCAGAATACGCACGATGGTTAGAAGAGCATAATAGGCAAACCAATGAACTAAGGGCTGCAATAAATTCTCATGCTGGGGATATTGAACTCCGTACCATTGTCGACAATTTCATGACTCAATTTGAAGATATCTACAGGCTGAAAGGTGTTGCAGCAAAAGCTGATGTTTTCCACATTCTATCAGGAATGTGGAAGACTCCAGCTGAGAGGTGTTTCATGTGGATTGGAGGCTTTCGGTCATCTGAACTTCTTAAGGTGAGAAATTCCTCATTTGTTTATTCTCTATGGTTTGCATATTCATATATCTTGATAACGATTGATTAAGTGTTGGATTTTTAAGGTATATTTCTTTTTAGTCACGTTATTCGTACATCTAAAACTGGATTGACTCTGTTGCAGCTTCTTGTAAGTCATTTGGAGCCTTTAACTGAACAACAGTTGATGGGTATCTACAACTTGCAACAGTCATCTCAACAAGCTGAAGACGCTCTTTCCCAAGGAATGGACGCATTGCAGCAATCACTTTCCGAGACATTGGCTAATGGTTCACCCAACCCATCAGGTGCTTCTGGAAATGTGGCCAATTACATGGGACAAATGGCTATGGCCATGGGAAAGCTTGGTACTCTTGAGGGATTTCTTCGCCAGGTAATTAACTGTCTATTTCTTTATCTCAACTTCCTTCTTTTTGGAGGCGTGTCCGGTGTTCGACATGTGTGAGTGTCAGACACCGACACAGTTTCATTCAATAACATACTTTCCGTTGTTGTATACCGTGTATCCATTCCGTTGTCGTGTTTGTGTCTGTACTTAATTTGCTAAACTTGAAAATATAAACCAATAAAGTGATAAAGAGTATAAAAGAATTAATTGTGTACCTTAGAGGGTGAGATGCATTACAATTGAGCATAGATTTAATTAATGATACACGTGTATGACATATTGATTCATCAGAAGAATAAATAAAAGTAGTTACAACTTATAACACTTACCAATTCACTTTTGTTTTCCTTTTCCTTCATGTTTATAGGCTGATAACCTGAGGCAGCAAACGTTGCAACAAATGCTTCGGATATTAACAACCAGACAATCAGCTCGAGCTCTTCTCGCAATAAGTGATTATTTCTCCCGGCTGCGAGCTCTGAGTTCTCTATGGCTTGCACGGCCAAGGGAGTAA
Protein sequence

>MS.gene017753.t1

MGSRGRTAEDTNKVVNGMPSYAPPSNNSMGMEGTNIHPSRISDFGALEQSLGFRVEDAMNLSRNPVFNQMKANSQALGADIQFGALSKSIANSDINLSAAIAGSQTLQLQKDALPNLASTSGGHRENWGESNMAEGSADTSTDDTEDKNQMPERGESSERSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSTGEQTHSMSGNGAMAFDAEYARWLEEHNRQTNELRAAINSHAGDIELRTIVDNFMTQFEDIYRLKGVAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVSHLEPLTEQQLMGIYNLQQSSQQAEDALSQGMDALQQSLSETLANGSPNPSGASGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE