Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014664.t1 | XP_013461985.1 | 99.5 | 418 | 2 | 0 | 1 | 418 | 41 | 458 | 2.30E-236 | 827.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014664.t1 | P28011 | 99.5 | 418 | 2 | 0 | 1 | 418 | 1 | 418 | 9.3e-239 | 827.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014664.t1 | A0A072V2E4 | 99.5 | 418 | 2 | 0 | 1 | 418 | 1 | 418 | 1.6e-236 | 827.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene014664 | MS.gene016021 | PPI |
| MS.gene33167 | MS.gene014664 | PPI |
| MS.gene014664 | MS.gene060918 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014664.t1 | MTR_3g110065 | 99.522 | 418 | 2 | 0 | 1 | 418 | 41 | 458 | 0.0 | 854 |
| MS.gene014664.t1 | MTR_3g110065 | 99.522 | 418 | 2 | 0 | 1 | 418 | 1 | 418 | 0.0 | 853 |
| MS.gene014664.t1 | MTR_3g110065 | 99.488 | 391 | 2 | 0 | 1 | 391 | 41 | 431 | 0.0 | 802 |
| MS.gene014664.t1 | MTR_1g013050 | 56.000 | 400 | 174 | 2 | 12 | 410 | 59 | 457 | 1.13e-163 | 468 |
| MS.gene014664.t1 | MTR_4g080140 | 50.627 | 399 | 195 | 1 | 16 | 414 | 25 | 421 | 2.32e-145 | 420 |
| MS.gene014664.t1 | MTR_4g080130 | 48.371 | 399 | 197 | 3 | 16 | 413 | 20 | 410 | 1.54e-133 | 390 |
| MS.gene014664.t1 | MTR_4g014910 | 50.000 | 54 | 27 | 0 | 288 | 341 | 23 | 76 | 5.53e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014664.t1 | AT5G11520 | 81.490 | 416 | 77 | 0 | 1 | 416 | 32 | 447 | 0.0 | 728 |
| MS.gene014664.t1 | AT5G19550 | 82.878 | 403 | 69 | 0 | 15 | 417 | 2 | 404 | 0.0 | 714 |
| MS.gene014664.t1 | AT1G62800 | 72.525 | 404 | 111 | 0 | 15 | 418 | 2 | 405 | 0.0 | 638 |
| MS.gene014664.t1 | AT1G62800 | 72.030 | 404 | 111 | 1 | 15 | 418 | 2 | 403 | 0.0 | 629 |
| MS.gene014664.t1 | AT1G62800 | 70.414 | 338 | 100 | 0 | 15 | 352 | 2 | 339 | 0.0 | 523 |
| MS.gene014664.t1 | AT4G31990 | 54.545 | 396 | 178 | 2 | 16 | 410 | 51 | 445 | 1.46e-160 | 460 |
| MS.gene014664.t1 | AT4G31990 | 54.545 | 396 | 178 | 2 | 16 | 410 | 51 | 445 | 1.46e-160 | 460 |
| MS.gene014664.t1 | AT4G31990 | 54.545 | 396 | 178 | 2 | 16 | 410 | 46 | 440 | 2.34e-160 | 459 |
| MS.gene014664.t1 | AT4G31990 | 54.545 | 396 | 178 | 2 | 16 | 410 | 51 | 445 | 3.89e-160 | 459 |
| MS.gene014664.t1 | AT2G30970 | 51.918 | 391 | 186 | 1 | 24 | 414 | 39 | 427 | 5.27e-147 | 425 |
| MS.gene014664.t1 | AT2G30970 | 51.918 | 391 | 186 | 1 | 24 | 414 | 39 | 427 | 5.27e-147 | 425 |
Find 113 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACCCAAGTTGAGCTTAAT+TGG | 0.160043 | 3.1:+87658677 | None:intergenic |
| GCGAAGAACATGGGTCTTTA+TGG | 0.189310 | 3.1:-87656597 | MS.gene014664:CDS |
| TTTCTTTGACAGTGCTTATC+AGG | 0.256759 | 3.1:-87656956 | MS.gene014664:intron |
| AGTCACATTATCAAGCAAAT+TGG | 0.295698 | 3.1:-87655767 | MS.gene014664:CDS |
| ACCACTGTTCAAGGCTTATC+TGG | 0.296478 | 3.1:-87657548 | MS.gene014664:CDS |
| AGCCAGATGTGGGACTGTTT+TGG | 0.314178 | 3.1:+87655008 | None:intergenic |
| GCCCTGCTATTCAAGAGAAC+AGG | 0.323064 | 3.1:-87657574 | MS.gene014664:CDS |
| AAGTCAAGCCCTCGTGTTGC+TGG | 0.342959 | 3.1:+87657277 | None:intergenic |
| CATCAGATGTCAGGTATATA+TGG | 0.350575 | 3.1:+87655687 | None:intergenic |
| GATCTTGGTTCTGCCCCATC+TGG | 0.359579 | 3.1:-87657087 | MS.gene014664:CDS |
| TACTCAAGTCCTCCTATTCA+TGG | 0.370617 | 3.1:-87656231 | MS.gene014664:CDS |
| AAGGAGTATATTCCAATTGT+TGG | 0.372264 | 3.1:-87657858 | MS.gene014664:CDS |
| TGCTGATGGTGGAGAATTGC+TGG | 0.380748 | 3.1:-87656634 | MS.gene014664:CDS |
| ACAGGACTTCTTGAGGATCT+TGG | 0.382872 | 3.1:-87657102 | MS.gene014664:intron |
| TATACTTGCCAACACCTACT+TGG | 0.385684 | 3.1:-87657363 | MS.gene014664:CDS |
| GTACTGGTTCGCTAAGAGTT+GGG | 0.400671 | 3.1:-87657526 | MS.gene014664:CDS |
| CACCCAAGTTGAGCTTAATT+GGG | 0.412201 | 3.1:+87658678 | None:intergenic |
| CTCCAAAACAGTCCCACATC+TGG | 0.425931 | 3.1:-87655010 | MS.gene014664:CDS |
| ATTGGAATGTTTACTTTCAC+AGG | 0.428060 | 3.1:-87655749 | MS.gene014664:CDS |
| GTTCAAGGCTTATCTGGTAC+TGG | 0.432196 | 3.1:-87657542 | MS.gene014664:CDS |
| ACACCGAGGATAGGATCTTC+AGG | 0.432488 | 3.1:+87659151 | None:intergenic |
| ATACTTGCCAACACCTACTT+GGG | 0.432758 | 3.1:-87657362 | MS.gene014664:CDS |
| AGGAGTATATTCCAATTGTT+GGG | 0.451682 | 3.1:-87657857 | MS.gene014664:CDS |
| TGCAGGAGGATTAGCATGGC+TGG | 0.453349 | 3.1:-87655039 | MS.gene014664:intron |
| AACAGGGTTACCACTGTTCA+AGG | 0.453722 | 3.1:-87657557 | MS.gene014664:CDS |
| ACCCTGTTCTCTTGAATAGC+AGG | 0.458243 | 3.1:+87657572 | None:intergenic |
| GTTCGTTTGTTTGTTGCTGA+TGG | 0.463816 | 3.1:-87656648 | MS.gene014664:CDS |
| TGATCCAACGCTTGAACAAT+GGG | 0.468112 | 3.1:-87657019 | MS.gene014664:CDS |
| CCATGTTCTTCGCATAACTC+TGG | 0.469261 | 3.1:+87656607 | None:intergenic |
| AAATCAGCGAGCCCAACAAT+TGG | 0.471038 | 3.1:+87657846 | None:intergenic |
| AAGTTGAGCTTAATTGGGAT+TGG | 0.472333 | 3.1:+87658683 | None:intergenic |
| ACACGAGGGCTTGACTTTCA+AGG | 0.475131 | 3.1:-87657271 | MS.gene014664:intron |
| CATATATACCTGACATCTGA+TGG | 0.476268 | 3.1:-87655686 | MS.gene014664:CDS |
| TGACTGGACTATTGAGTTGA+AGG | 0.476617 | 3.1:-87656085 | MS.gene014664:CDS |
| ACAATGGATGCACCATGAAT+AGG | 0.476661 | 3.1:+87656219 | None:intergenic |
| CATTGAAATTTAAGCAACTC+GGG | 0.476742 | 3.1:+87654963 | None:intergenic |
| TGCTCCCATTGTTCAAGCGT+TGG | 0.479098 | 3.1:+87657015 | None:intergenic |
| GGTACTGGTTCGCTAAGAGT+TGG | 0.481361 | 3.1:-87657527 | MS.gene014664:CDS |
| GTCAAGATGGAAACTTGCTC+AGG | 0.481636 | 3.1:+87655719 | None:intergenic |
| AATAGGAGGACTTGAGTACA+TGG | 0.483790 | 3.1:+87656236 | None:intergenic |
| GCCAACTGAAACTTGTGATT+AGG | 0.484457 | 3.1:-87656260 | MS.gene014664:CDS |
| TCAGGGATTTGTACAATGAC+TGG | 0.487365 | 3.1:-87656101 | MS.gene014664:intron |
| ATGGTACTCTTTAGTCAAGA+TGG | 0.489731 | 3.1:+87655706 | None:intergenic |
| TTGATCCAACGCTTGAACAA+TGG | 0.495724 | 3.1:-87657020 | MS.gene014664:CDS |
| CTAACATGTCATTCAATAGT+TGG | 0.496646 | 3.1:+87657982 | None:intergenic |
| GAATAGGTACACCAGGTGAT+TGG | 0.497772 | 3.1:-87655790 | MS.gene014664:intron |
| TCAGCAACAAACAAACGAAC+AGG | 0.500179 | 3.1:+87656651 | None:intergenic |
| TCAGAAGAAGCGGTTGGAGA+AGG | 0.502905 | 3.1:+87659202 | None:intergenic |
| TACTGGTTCGCTAAGAGTTG+GGG | 0.504319 | 3.1:-87657525 | MS.gene014664:CDS |
| TGTCTTACCCATCAGATGTC+AGG | 0.505685 | 3.1:+87655678 | None:intergenic |
| TCACTACCTGTCCTTGAGAA+TGG | 0.510089 | 3.1:+87656191 | None:intergenic |
| CGTTTGTTTGTTGCTGATGG+TGG | 0.521870 | 3.1:-87656645 | MS.gene014664:CDS |
| CCAGAGTTATGCGAAGAACA+TGG | 0.522554 | 3.1:-87656607 | MS.gene014664:CDS |
| CTTGAGAATGGCGGCCACAA+TGG | 0.525791 | 3.1:+87656203 | None:intergenic |
| ATTAAGCTCAACTTGGGTGT+TGG | 0.529955 | 3.1:-87658674 | MS.gene014664:CDS |
| AATCCCAATTAAGCTCAACT+TGG | 0.530818 | 3.1:-87658681 | MS.gene014664:CDS |
| ACGAACGAGATGAGCGAAGA+CGG | 0.543404 | 3.1:+87659177 | None:intergenic |
| ATCTGCATCTAGACTTCCAC+TGG | 0.543479 | 3.1:+87656680 | None:intergenic |
| CATGTTCTTCGCATAACTCT+GGG | 0.545873 | 3.1:+87656608 | None:intergenic |
| TGGCCGCCATTCTCAAGGAC+AGG | 0.547950 | 3.1:-87656197 | MS.gene014664:intron |
| ATAAGATTCTAACCTCAGTT+CGG | 0.549064 | 3.1:+87658645 | None:intergenic |
| TGATAAGCACTGTCAAAGAA+AGG | 0.550216 | 3.1:+87656958 | None:intergenic |
| TTTGTATGATTGCCCCAAGT+AGG | 0.551425 | 3.1:+87657349 | None:intergenic |
| AGTCAGCGGATGTTTCAAGC+AGG | 0.552000 | 3.1:-87656290 | MS.gene014664:CDS |
| GTTCCTTACAGGACTTCTTG+AGG | 0.552621 | 3.1:-87657109 | MS.gene014664:intron |
| ACATTGAAATTTAAGCAACT+CGG | 0.554651 | 3.1:+87654962 | None:intergenic |
| GCCTAATCACAAGTTTCAGT+TGG | 0.558972 | 3.1:+87656259 | None:intergenic |
| GCAAAACAACAGATCCAGAT+GGG | 0.564621 | 3.1:+87657073 | None:intergenic |
| TTTGATGCTTTACGTGCTAG+AGG | 0.574452 | 3.1:-87656024 | MS.gene014664:intron |
| ACGGAATCAGAAGAAGCGGT+TGG | 0.574811 | 3.1:+87659196 | None:intergenic |
| TGAAATGCTTACAATGCTCA+AGG | 0.575001 | 3.1:+87656560 | None:intergenic |
| CATTGTGGCCGCCATTCTCA+AGG | 0.579863 | 3.1:-87656202 | MS.gene014664:CDS |
| GGAAGGTAAACCCCTTGTGT+TGG | 0.582281 | 3.1:-87658027 | MS.gene014664:CDS |
| GCTCCTGAAGATCCTATCCT+CGG | 0.583735 | 3.1:-87659154 | MS.gene014664:CDS |
| TGCAATTGAATAGGTACACC+AGG | 0.584729 | 3.1:-87655797 | MS.gene014664:intron |
| CCCTGCTATTCAAGAGAACA+GGG | 0.585827 | 3.1:-87657573 | MS.gene014664:CDS |
| TACTATGCTCCAGCAACACG+AGG | 0.591280 | 3.1:-87657286 | MS.gene014664:CDS |
| ATCCCAATTAAGCTCAACTT+GGG | 0.594526 | 3.1:-87658680 | MS.gene014664:CDS |
| AGCGTTGGATCAACACCAGT+AGG | 0.595444 | 3.1:+87657030 | None:intergenic |
| GGTCTTTATGGTGAACGTGT+TGG | 0.597249 | 3.1:-87656585 | MS.gene014664:CDS |
| CCCTGTTCTCTTGAATAGCA+GGG | 0.601948 | 3.1:+87657573 | None:intergenic |
| GCCTCACAACATCCAACACA+AGG | 0.602594 | 3.1:+87658015 | None:intergenic |
| ATATATACCTGACATCTGAT+GGG | 0.603581 | 3.1:-87655685 | MS.gene014664:intron |
| GCATGTGCACATAACCCTAC+TGG | 0.605334 | 3.1:-87657045 | MS.gene014664:CDS |
| AACAAACATACACCGAGGAT+AGG | 0.605565 | 3.1:+87659142 | None:intergenic |
| ACCAGATAAGCCTTGAACAG+TGG | 0.611040 | 3.1:+87657547 | None:intergenic |
| GTCAGCGGATGTTTCAAGCA+GGG | 0.615517 | 3.1:-87656289 | MS.gene014664:CDS |
| TATTCATGGTGCATCCATTG+TGG | 0.615918 | 3.1:-87656217 | MS.gene014664:CDS |
| AGCAAAACAACAGATCCAGA+TGG | 0.618409 | 3.1:+87657072 | None:intergenic |
| GACTATTGAGTTGAAGGCAA+TGG | 0.618768 | 3.1:-87656079 | MS.gene014664:CDS |
| CAGAGTTATGCGAAGAACAT+GGG | 0.621421 | 3.1:-87656606 | MS.gene014664:CDS |
| ATGGATGCACCATGAATAGG+AGG | 0.622449 | 3.1:+87656222 | None:intergenic |
| TTGGAATGTTTACTTTCACA+GGG | 0.622534 | 3.1:-87655748 | MS.gene014664:CDS |
| GCGTTGGATCAACACCAGTA+GGG | 0.625083 | 3.1:+87657031 | None:intergenic |
| TGTATTGCATCAGCCAGATG+TGG | 0.629141 | 3.1:+87654997 | None:intergenic |
| ATTGTGCAGGAGGATTAGCA+TGG | 0.631015 | 3.1:-87655043 | MS.gene014664:intron |
| TCCCCAGGTCAGCAAGTCAG+CGG | 0.637569 | 3.1:-87656304 | MS.gene014664:intron |
| GTATTGCATCAGCCAGATGT+GGG | 0.644231 | 3.1:+87654998 | None:intergenic |
| GAAGACGGAATCAGAAGAAG+CGG | 0.647565 | 3.1:+87659192 | None:intergenic |
| CCCTTGTGTTGGATGTTGTG+AGG | 0.649198 | 3.1:-87658016 | MS.gene014664:CDS |
| GGTAACTGTCGCTTACAACA+AGG | 0.650998 | 3.1:-87658708 | MS.gene014664:CDS |
| TACTTGGGGCAATCATACAA+AGG | 0.652701 | 3.1:-87657347 | MS.gene014664:CDS |
| CTCACAACATCCAACACAAG+GGG | 0.662888 | 3.1:+87658017 | None:intergenic |
| TGATTGCCCCAAGTAGGTGT+TGG | 0.664181 | 3.1:+87657355 | None:intergenic |
| TACTTGCCAACACCTACTTG+GGG | 0.669923 | 3.1:-87657361 | MS.gene014664:CDS |
| TGTTGGTGCTTACCGAACTG+AGG | 0.670501 | 3.1:-87658657 | MS.gene014664:intron |
| ATAATGTGACTCCAATCACC+TGG | 0.679037 | 3.1:+87655779 | None:intergenic |
| CCTCACAACATCCAACACAA+GGG | 0.691571 | 3.1:+87658016 | None:intergenic |
| ACTGGTTCGCTAAGAGTTGG+GGG | 0.694356 | 3.1:-87657524 | MS.gene014664:CDS |
| CTACCTGTCCTTGAGAATGG+CGG | 0.699592 | 3.1:+87656194 | None:intergenic |
| ACTATGCTCCAGCAACACGA+GGG | 0.711939 | 3.1:-87657285 | MS.gene014664:CDS |
| CAAAACAACAGATCCAGATG+GGG | 0.713598 | 3.1:+87657074 | None:intergenic |
| ATAGGAGGACTTGAGTACAT+GGG | 0.714033 | 3.1:+87656237 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGCATAATAATTTAAAAAT+TGG | - | chr3.1:87655655-87655674 | MS.gene014664:intron | 10.0% |
| !! | TTAGTTAAAAAAATATAAAG+GGG | + | chr3.1:87656753-87656772 | None:intergenic | 10.0% |
| !!! | AAGAATTTATTTTGTTATTA+AGG | - | chr3.1:87658796-87658815 | MS.gene014664:intron | 10.0% |
| !!! | AATTTTTTTTTTTTTTTTGG+TGG | + | chr3.1:87656553-87656572 | None:intergenic | 10.0% |
| !!! | ATTTTTAAATTATTATGCAT+TGG | + | chr3.1:87655655-87655674 | None:intergenic | 10.0% |
| !! | CAAAAAAAAAAAAAAAACAG+AGG | + | chr3.1:87655437-87655456 | None:intergenic | 15.0% |
| !!! | ATTAAATGGAGATAATTTTA+TGG | - | chr3.1:87657662-87657681 | MS.gene014664:intron | 15.0% |
| !!! | TTAAATGGAGATAATTTTAT+GGG | - | chr3.1:87657663-87657682 | MS.gene014664:intron | 15.0% |
| !! | AAATGAATGATTACACATAA+GGG | + | chr3.1:87659093-87659112 | None:intergenic | 20.0% |
| !! | AATATCACAAATCTTATGTT+AGG | - | chr3.1:87655937-87655956 | MS.gene014664:intron | 20.0% |
| !! | CATAATTGGATTTCATTTAA+TGG | - | chr3.1:87657048-87657067 | MS.gene014664:CDS | 20.0% |
| !! | TAAATGAATGATTACACATA+AGG | + | chr3.1:87659094-87659113 | None:intergenic | 20.0% |
| !! | TACATACTTTCAAAAATCTT+TGG | + | chr3.1:87658918-87658937 | None:intergenic | 20.0% |
| !! | TCAATACTCAATAACATAAT+TGG | - | chr3.1:87657034-87657053 | MS.gene014664:CDS | 20.0% |
| !! | TTATTAACAGCAAAAGAAAT+TGG | + | chr3.1:87658661-87658680 | None:intergenic | 20.0% |
| !! | TTCAATAAAAGAATATGCAT+TGG | + | chr3.1:87657452-87657471 | None:intergenic | 20.0% |
| !!! | AATCATCAGTAACAAAATTT+TGG | + | chr3.1:87655400-87655419 | None:intergenic | 20.0% |
| !!! | AGGTTAGAATCTTATTTATT+TGG | - | chr3.1:87655558-87655577 | MS.gene014664:intron | 20.0% |
| !!! | ATTTATTTTGTTATTAAGGC+TGG | - | chr3.1:87658800-87658819 | MS.gene014664:intron | 20.0% |
| !!! | GGTTAGAATCTTATTTATTT+GGG | - | chr3.1:87655559-87655578 | MS.gene014664:intron | 20.0% |
| !!! | GTTTTCTCATAAACTATTTT+GGG | - | chr3.1:87655842-87655861 | MS.gene014664:intron | 20.0% |
| !!! | TAATCATCTTTTGCATAATT+TGG | - | chr3.1:87656002-87656021 | MS.gene014664:intron | 20.0% |
| !!! | TGTTTTCTCATAAACTATTT+TGG | - | chr3.1:87655841-87655860 | MS.gene014664:intron | 20.0% |
| !!! | TTTTCTCATAAACTATTTTG+GGG | - | chr3.1:87655843-87655862 | MS.gene014664:intron | 20.0% |
| ! | AAAAGATGATTATGCAGTAT+AGG | + | chr3.1:87655994-87656013 | None:intergenic | 25.0% |
| ! | AAGATTCAAGAGATTAGAAA+TGG | + | chr3.1:87657359-87657378 | None:intergenic | 25.0% |
| ! | ACTCTTTCTTTACTATCAAA+TGG | + | chr3.1:87655815-87655834 | None:intergenic | 25.0% |
| ! | AGGGAAAAAATCATATTGAA+TGG | + | chr3.1:87657730-87657749 | None:intergenic | 25.0% |
| ! | AGTTATGCATAATTTATGCA+AGG | - | chr3.1:87656516-87656535 | MS.gene014664:intron | 25.0% |
| ! | ATTGTAGAAAAGGAAAATCA+GGG | + | chr3.1:87657865-87657884 | None:intergenic | 25.0% |
| ! | CAACTCAAATAAATGTTTCA+TGG | + | chr3.1:87658365-87658384 | None:intergenic | 25.0% |
| ! | GGGAAAAAATCATATTGAAT+GGG | + | chr3.1:87657729-87657748 | None:intergenic | 25.0% |
| ! | TAATATTGCTGTATATCGTT+GGG | - | chr3.1:87656770-87656789 | MS.gene014664:intron | 25.0% |
| ! | TATTGATCATGATGCATATT+GGG | + | chr3.1:87657020-87657039 | None:intergenic | 25.0% |
| ! | TATTGTAGAAAAGGAAAATC+AGG | + | chr3.1:87657866-87657885 | None:intergenic | 25.0% |
| ! | TGACTTGATTAAGAGAATAA+TGG | + | chr3.1:87658730-87658749 | None:intergenic | 25.0% |
| ! | TTGATACAAATGCGAAAATA+AGG | + | chr3.1:87656986-87657005 | None:intergenic | 25.0% |
| !! | AAAAGAAAGTATAGTGAATC+AGG | + | chr3.1:87656241-87656260 | None:intergenic | 25.0% |
| !! | AAGCATTTCAAAGCATTAAA+TGG | - | chr3.1:87657648-87657667 | MS.gene014664:intron | 25.0% |
| !! | AATCTTATTTATTTGGGATG+TGG | - | chr3.1:87655565-87655584 | MS.gene014664:intron | 25.0% |
| !! | TGAAATATATAGGCATTGTT+TGG | - | chr3.1:87655734-87655753 | MS.gene014664:CDS | 25.0% |
| !! | TTTTTCTACATAAAGAAGCT+TGG | - | chr3.1:87657809-87657828 | MS.gene014664:CDS | 25.0% |
| !!! | ACATCTATTTTTGTTCAACA+GGG | - | chr3.1:87657487-87657506 | MS.gene014664:intron | 25.0% |
| !!! | GTCTTCATTCTGAAATATAT+AGG | - | chr3.1:87655724-87655743 | MS.gene014664:CDS | 25.0% |
| !!! | GTTGCATTCTTTTTAGTTTA+AGG | - | chr3.1:87658974-87658993 | MS.gene014664:intron | 25.0% |
| AAAGTATGTACTGTTTGATG+TGG | - | chr3.1:87658928-87658947 | MS.gene014664:intron | 30.0% | |
| AAGAATATGCATTGGAGATA+TGG | + | chr3.1:87657444-87657463 | None:intergenic | 30.0% | |
| ACATGATTCAAATCATAAGC+AGG | + | chr3.1:87657750-87657769 | None:intergenic | 30.0% | |
| AGTCACATTATCAAGCAAAT+TGG | - | chr3.1:87658428-87658447 | MS.gene014664:intron | 30.0% | |
| ATAAAGGGGATAGAAAGTTA+AGG | + | chr3.1:87656739-87656758 | None:intergenic | 30.0% | |
| ATAAGATTCTAACCTCAGTT+CGG | + | chr3.1:87655553-87655572 | None:intergenic | 30.0% | |
| ATATATACCTGACATCTGAT+GGG | - | chr3.1:87658510-87658529 | MS.gene014664:intron | 30.0% | |
| ATCTTAATGAGATGCGAAAT+TGG | + | chr3.1:87655152-87655171 | None:intergenic | 30.0% | |
| ATTGAATGGGATGAAATACA+AGG | + | chr3.1:87657716-87657735 | None:intergenic | 30.0% | |
| ATTGGAATGTTTACTTTCAC+AGG | - | chr3.1:87658446-87658465 | MS.gene014664:intron | 30.0% | |
| CATGATTCAAATCATAAGCA+GGG | + | chr3.1:87657749-87657768 | None:intergenic | 30.0% | |
| CTAACATGTCATTCAATAGT+TGG | + | chr3.1:87656216-87656235 | None:intergenic | 30.0% | |
| CTAATATTGCTGTATATCGT+TGG | - | chr3.1:87656769-87656788 | MS.gene014664:intron | 30.0% | |
| CTGTTGAACAAAAATAGATG+TGG | + | chr3.1:87657488-87657507 | None:intergenic | 30.0% | |
| GAAATATATATCCATGCTGT+AGG | + | chr3.1:87659064-87659083 | None:intergenic | 30.0% | |
| GATTGAATTTCAAAGCGATA+CGG | - | chr3.1:87655270-87655289 | MS.gene014664:intron | 30.0% | |
| GTCATTGAAAATGCATGTTA+AGG | - | chr3.1:87656024-87656043 | MS.gene014664:intron | 30.0% | |
| TAAGGAATGATAGATCGATA+AGG | - | chr3.1:87656042-87656061 | MS.gene014664:CDS | 30.0% | |
| TATTTCTCCTGCAATTGAAT+AGG | - | chr3.1:87658389-87658408 | MS.gene014664:intron | 30.0% | |
| TGATAAAGAACTGTACAGAA+AGG | + | chr3.1:87658238-87658257 | None:intergenic | 30.0% | |
| TGTGTCTGTGTTTGAAAAAT+AGG | - | chr3.1:87655466-87655485 | MS.gene014664:intron | 30.0% | |
| TTCAAGAGATTAGAAATGGT+TGG | + | chr3.1:87657355-87657374 | None:intergenic | 30.0% | |
| TTGGAATGTTTACTTTCACA+GGG | - | chr3.1:87658447-87658466 | MS.gene014664:intron | 30.0% | |
| ! | AAGGAGTATATTCCAATTGT+TGG | - | chr3.1:87656337-87656356 | MS.gene014664:intron | 30.0% |
| ! | AGAATCTTTTGCAATTCCTT+TGG | - | chr3.1:87658207-87658226 | MS.gene014664:intron | 30.0% |
| ! | AGGAGTATATTCCAATTGTT+GGG | - | chr3.1:87656338-87656357 | MS.gene014664:intron | 30.0% |
| ! | GTAAAGCATCAAAAAGTTGT+TGG | + | chr3.1:87658164-87658183 | None:intergenic | 30.0% |
| ! | GTATTGATCATGATGCATAT+TGG | + | chr3.1:87657021-87657040 | None:intergenic | 30.0% |
| ! | TCAAAAACACATGTTACTTG+TGG | + | chr3.1:87657835-87657854 | None:intergenic | 30.0% |
| ! | TCATACAAAGGTTTTCAACT+TGG | - | chr3.1:87656860-87656879 | MS.gene014664:intron | 30.0% |
| !! | TGACTTGTGAGTTTTACTAA+TGG | - | chr3.1:87656129-87656148 | MS.gene014664:intron | 30.0% |
| !! | TTCTGTTCTGCATTGTTTTT+AGG | - | chr3.1:87656305-87656324 | MS.gene014664:intron | 30.0% |
| !! | TTGAGTGCTAAGCTTATTTT+TGG | - | chr3.1:87656379-87656398 | MS.gene014664:intron | 30.0% |
| !!! | CACATCTATTTTTGTTCAAC+AGG | - | chr3.1:87657486-87657505 | MS.gene014664:intron | 30.0% |
| !!! | CATGCATTTTTTTATTGTGC+AGG | - | chr3.1:87659139-87659158 | MS.gene014664:intron | 30.0% |
| AAAGAAATTGGACAACAGCA+TGG | + | chr3.1:87658649-87658668 | None:intergenic | 35.0% | |
| AAGAAAACAAACATACACCG+AGG | + | chr3.1:87655061-87655080 | None:intergenic | 35.0% | |
| AAGATCAAGGCAAACAAACA+CGG | + | chr3.1:87656800-87656819 | None:intergenic | 35.0% | |
| AAGTTGAGCTTAATTGGGAT+TGG | + | chr3.1:87655515-87655534 | None:intergenic | 35.0% | |
| AATCCCAATTAAGCTCAACT+TGG | - | chr3.1:87655514-87655533 | MS.gene014664:intron | 35.0% | |
| AATGCATGTCTTGAGTTATG+TGG | + | chr3.1:87659127-87659146 | None:intergenic | 35.0% | |
| AGGGCTATGTTCAAAAAAGT+GGG | + | chr3.1:87656606-87656625 | None:intergenic | 35.0% | |
| ATAATGCGCTGAAAAGATCA+AGG | + | chr3.1:87656813-87656832 | None:intergenic | 35.0% | |
| ATCCCAATTAAGCTCAACTT+GGG | - | chr3.1:87655515-87655534 | MS.gene014664:intron | 35.0% | |
| ATCTGTAGTGATTAGTGATC+TGG | - | chr3.1:87657690-87657709 | MS.gene014664:intron | 35.0% | |
| ATGGTACTCTTTAGTCAAGA+TGG | + | chr3.1:87658492-87658511 | None:intergenic | 35.0% | |
| ATTGTACAAATCCCTGAAAG+AGG | + | chr3.1:87658091-87658110 | None:intergenic | 35.0% | |
| CATATATACCTGACATCTGA+TGG | - | chr3.1:87658509-87658528 | MS.gene014664:intron | 35.0% | |
| CATCAGATGTCAGGTATATA+TGG | + | chr3.1:87658511-87658530 | None:intergenic | 35.0% | |
| TGAAATGCTTACAATGCTCA+AGG | + | chr3.1:87657638-87657657 | None:intergenic | 35.0% | |
| TTATGCAGTATAGGTCTGTT+TGG | + | chr3.1:87655985-87656004 | None:intergenic | 35.0% | |
| TTATGTCCACACACAAGTTA+TGG | + | chr3.1:87657302-87657321 | None:intergenic | 35.0% | |
| TTCAATTAGTTCAGACGAGT+AGG | - | chr3.1:87658557-87658576 | MS.gene014664:intron | 35.0% | |
| TTTCTTTGACAGTGCTTATC+AGG | - | chr3.1:87657239-87657258 | MS.gene014664:intron | 35.0% | |
| ! | CATGGATTATCCCAAGAAAT+GGG | + | chr3.1:87657389-87657408 | None:intergenic | 35.0% |
| ! | GGTAGAAGTATATTCTTGTG+TGG | + | chr3.1:87657423-87657442 | None:intergenic | 35.0% |
| ! | TGATAAGCACTGTCAAAGAA+AGG | + | chr3.1:87657240-87657259 | None:intergenic | 35.0% |
| ! | TTTCTACCATAACTTGTGTG+TGG | - | chr3.1:87657293-87657312 | MS.gene014664:CDS | 35.0% |
| !! | GGGAGCATTTATTGTAGAAA+AGG | + | chr3.1:87657875-87657894 | None:intergenic | 35.0% |
| !!! | GCATTTTTTTATTGTGCAGG+AGG | - | chr3.1:87659142-87659161 | MS.gene014664:intron | 35.0% |
| !!! | TTTTTTTTGGTGGTGAACCT+CGG | + | chr3.1:87656543-87656562 | None:intergenic | 35.0% |
| AACAAACATACACCGAGGAT+AGG | + | chr3.1:87655056-87655075 | None:intergenic | 40.0% | |
| AAGAAGTCCTGTAAGGAACA+AGG | + | chr3.1:87657085-87657104 | None:intergenic | 40.0% | |
| AAGTGGGCAAAAGAACAGTT+AGG | + | chr3.1:87656590-87656609 | None:intergenic | 40.0% | |
| AATAGGAGGACTTGAGTACA+TGG | + | chr3.1:87657962-87657981 | None:intergenic | 40.0% | |
| AATCCTTGAAAGATTCTCGC+AGG | + | chr3.1:87658336-87658355 | None:intergenic | 40.0% | |
| ACAATGGATGCACCATGAAT+AGG | + | chr3.1:87657979-87657998 | None:intergenic | 40.0% | |
| AGCAAAACAACAGATCCAGA+TGG | + | chr3.1:87657126-87657145 | None:intergenic | 40.0% | |
| AGTTGCAATGTGCAACATGT+TGG | - | chr3.1:87658687-87658706 | MS.gene014664:CDS | 40.0% | |
| ATAATGTGACTCCAATCACC+TGG | + | chr3.1:87658419-87658438 | None:intergenic | 40.0% | |
| ATACTTGCCAACACCTACTT+GGG | - | chr3.1:87656833-87656852 | MS.gene014664:intron | 40.0% | |
| ATAGGAGGACTTGAGTACAT+GGG | + | chr3.1:87657961-87657980 | None:intergenic | 40.0% | |
| ATTAAGCTCAACTTGGGTGT+TGG | - | chr3.1:87655521-87655540 | MS.gene014664:intron | 40.0% | |
| CAAAACAACAGATCCAGATG+GGG | + | chr3.1:87657124-87657143 | None:intergenic | 40.0% | |
| CAAATCACATGTGTCAGTGT+TGG | - | chr3.1:87655691-87655710 | MS.gene014664:CDS | 40.0% | |
| CAATATACTTCTGCTTCCCT+TGG | - | chr3.1:87658029-87658048 | MS.gene014664:CDS | 40.0% | |
| CAGAGTTATGCGAAGAACAT+GGG | - | chr3.1:87657589-87657608 | MS.gene014664:intron | 40.0% | |
| CAGGGCTATGTTCAAAAAAG+TGG | + | chr3.1:87656607-87656626 | None:intergenic | 40.0% | |
| CATAATTTATGCAAGGTCCG+AGG | - | chr3.1:87656523-87656542 | MS.gene014664:intron | 40.0% | |
| CATGTTCTTCGCATAACTCT+GGG | + | chr3.1:87657590-87657609 | None:intergenic | 40.0% | |
| CCATTTCTTGGGATAATCCA+TGG | - | chr3.1:87657387-87657406 | MS.gene014664:intron | 40.0% | |
| CTTGAAGCTTCCCATTTCTT+GGG | - | chr3.1:87657376-87657395 | MS.gene014664:intron | 40.0% | |
| GCAAAACAACAGATCCAGAT+GGG | + | chr3.1:87657125-87657144 | None:intergenic | 40.0% | |
| GCCAACTGAAACTTGTGATT+AGG | - | chr3.1:87657935-87657954 | MS.gene014664:intron | 40.0% | |
| GCCTAATCACAAGTTTCAGT+TGG | + | chr3.1:87657939-87657958 | None:intergenic | 40.0% | |
| GTTCCAGTTAAGTGTGAACA+TGG | - | chr3.1:87658606-87658625 | MS.gene014664:intron | 40.0% | |
| GTTGCAATGTGCAACATGTT+GGG | - | chr3.1:87658688-87658707 | MS.gene014664:CDS | 40.0% | |
| GTTTATCTCTACCTACAGCA+TGG | - | chr3.1:87659050-87659069 | MS.gene014664:intron | 40.0% | |
| TACTCAAGTCCTCCTATTCA+TGG | - | chr3.1:87657964-87657983 | MS.gene014664:intron | 40.0% | |
| TACTTGGGGCAATCATACAA+AGG | - | chr3.1:87656848-87656867 | MS.gene014664:intron | 40.0% | |
| TATACTTGCCAACACCTACT+TGG | - | chr3.1:87656832-87656851 | MS.gene014664:intron | 40.0% | |
| TATGAGAGATGATGCTGTCT+CGG | - | chr3.1:87658999-87659018 | MS.gene014664:intron | 40.0% | |
| TATTCATGGTGCATCCATTG+TGG | - | chr3.1:87657978-87657997 | MS.gene014664:intron | 40.0% | |
| TCAGCAACAAACAAACGAAC+AGG | + | chr3.1:87657547-87657566 | None:intergenic | 40.0% | |
| TCAGGGATTTGTACAATGAC+TGG | - | chr3.1:87658094-87658113 | MS.gene014664:intron | 40.0% | |
| TCTTGAAGCTTCCCATTTCT+TGG | - | chr3.1:87657375-87657394 | MS.gene014664:intron | 40.0% | |
| TGATCCAACGCTTGAACAAT+GGG | - | chr3.1:87657176-87657195 | MS.gene014664:intron | 40.0% | |
| TGCAATTGAATAGGTACACC+AGG | - | chr3.1:87658398-87658417 | MS.gene014664:intron | 40.0% | |
| TGGTGTACCTATTCAATTGC+AGG | + | chr3.1:87658399-87658418 | None:intergenic | 40.0% | |
| TGTGTGGACATTATTCACCA+TGG | + | chr3.1:87657407-87657426 | None:intergenic | 40.0% | |
| TTCTACAATAAATGCTCCCC+AGG | - | chr3.1:87657876-87657895 | MS.gene014664:intron | 40.0% | |
| TTGATCCAACGCTTGAACAA+TGG | - | chr3.1:87657175-87657194 | MS.gene014664:intron | 40.0% | |
| TTGCAATGTGCAACATGTTG+GGG | - | chr3.1:87658689-87658708 | MS.gene014664:CDS | 40.0% | |
| TTTGATGCTTTACGTGCTAG+AGG | - | chr3.1:87658171-87658190 | MS.gene014664:intron | 40.0% | |
| TTTGTATGATTGCCCCAAGT+AGG | + | chr3.1:87656849-87656868 | None:intergenic | 40.0% | |
| ! | ACAAAGGTTTTCAACTTGGC+AGG | - | chr3.1:87656864-87656883 | MS.gene014664:intron | 40.0% |
| ! | ACACCCAAGTTGAGCTTAAT+TGG | + | chr3.1:87655521-87655540 | None:intergenic | 40.0% |
| ! | CACCCAAGTTGAGCTTAATT+GGG | + | chr3.1:87655520-87655539 | None:intergenic | 40.0% |
| ! | CCATGGATTATCCCAAGAAA+TGG | + | chr3.1:87657390-87657409 | None:intergenic | 40.0% |
| ! | GTTCGTTTGTTTGTTGCTGA+TGG | - | chr3.1:87657547-87657566 | MS.gene014664:CDS | 40.0% |
| !! | GACTATTGAGTTGAAGGCAA+TGG | - | chr3.1:87658116-87658135 | MS.gene014664:intron | 40.0% |
| !! | TGACTGGACTATTGAGTTGA+AGG | - | chr3.1:87658110-87658129 | MS.gene014664:intron | 40.0% |
| !!! | ACTTGTTTTGCTCCTCTTTC+AGG | - | chr3.1:87658076-87658095 | MS.gene014664:intron | 40.0% |
| !!! | AGCTTATTTTTGGTGCAGAC+AGG | - | chr3.1:87656389-87656408 | MS.gene014664:intron | 40.0% |
| !!! | CTTGTTTTGCTCCTCTTTCA+GGG | - | chr3.1:87658077-87658096 | MS.gene014664:intron | 40.0% |
| !!! | TGTTTTTAGGTCACGCAACA+AGG | - | chr3.1:87656318-87656337 | MS.gene014664:intron | 40.0% |
| AAATCAGCGAGCCCAACAAT+TGG | + | chr3.1:87656352-87656371 | None:intergenic | 45.0% | |
| AACAGGGTTACCACTGTTCA+AGG | - | chr3.1:87656638-87656657 | MS.gene014664:CDS | 45.0% | |
| AAGTCCTGTAAGGAACAAGG+AGG | + | chr3.1:87657082-87657101 | None:intergenic | 45.0% | |
| AATGGCCTGTGATACTTACC+AGG | - | chr3.1:87656147-87656166 | MS.gene014664:intron | 45.0% | |
| ACAGGACTTCTTGAGGATCT+TGG | - | chr3.1:87657093-87657112 | MS.gene014664:CDS | 45.0% | |
| ACCACTGTTCAAGGCTTATC+TGG | - | chr3.1:87656647-87656666 | MS.gene014664:CDS | 45.0% | |
| ACCAGATAAGCCTTGAACAG+TGG | + | chr3.1:87656651-87656670 | None:intergenic | 45.0% | |
| ACCCTGTTCTCTTGAATAGC+AGG | + | chr3.1:87656626-87656645 | None:intergenic | 45.0% | |
| ACCTTCCTGGTAAGTATCAC+AGG | + | chr3.1:87656155-87656174 | None:intergenic | 45.0% | |
| AGTCCTGTAAGGAACAAGGA+GGG | + | chr3.1:87657081-87657100 | None:intergenic | 45.0% | |
| ATAACTGAGCTAAGCTCACG+GGG | + | chr3.1:87656502-87656521 | None:intergenic | 45.0% | |
| ATATGTCCAAGTCCAGCCAA+GGG | + | chr3.1:87658048-87658067 | None:intergenic | 45.0% | |
| ATCTGCATCTAGACTTCCAC+TGG | + | chr3.1:87657518-87657537 | None:intergenic | 45.0% | |
| ATGCTTTACGTGCTAGAGGT+TGG | - | chr3.1:87658175-87658194 | MS.gene014664:intron | 45.0% | |
| ATGGATGCACCATGAATAGG+AGG | + | chr3.1:87657976-87657995 | None:intergenic | 45.0% | |
| CATAACTGAGCTAAGCTCAC+GGG | + | chr3.1:87656503-87656522 | None:intergenic | 45.0% | |
| CCAGAGTTATGCGAAGAACA+TGG | - | chr3.1:87657588-87657607 | MS.gene014664:intron | 45.0% | |
| CCATGTTCTTCGCATAACTC+TGG | + | chr3.1:87657591-87657610 | None:intergenic | 45.0% | |
| CCCTGCTATTCAAGAGAACA+GGG | - | chr3.1:87656622-87656641 | MS.gene014664:CDS | 45.0% | |
| CCCTGTTCTCTTGAATAGCA+GGG | + | chr3.1:87656625-87656644 | None:intergenic | 45.0% | |
| CCTCACAACATCCAACACAA+GGG | + | chr3.1:87656182-87656201 | None:intergenic | 45.0% | |
| CTCACAACATCCAACACAAG+GGG | + | chr3.1:87656181-87656200 | None:intergenic | 45.0% | |
| GAAGACGGAATCAGAAGAAG+CGG | + | chr3.1:87655006-87655025 | None:intergenic | 45.0% | |
| GAATAGGTACACCAGGTGAT+TGG | - | chr3.1:87658405-87658424 | MS.gene014664:intron | 45.0% | |
| GATCCTCAAGAAGTCCTGTA+AGG | + | chr3.1:87657092-87657111 | None:intergenic | 45.0% | |
| GCACCATGTTCACACTTAAC+TGG | + | chr3.1:87658612-87658631 | None:intergenic | 45.0% | |
| GCATAACTGAGCTAAGCTCA+CGG | + | chr3.1:87656504-87656523 | None:intergenic | 45.0% | |
| GCGAAGAACATGGGTCTTTA+TGG | - | chr3.1:87657598-87657617 | MS.gene014664:intron | 45.0% | |
| GGTCTTTATGGTGAACGTGT+TGG | - | chr3.1:87657610-87657629 | MS.gene014664:intron | 45.0% | |
| GTACAGAAAGGACAAGCCAA+AGG | + | chr3.1:87658226-87658245 | None:intergenic | 45.0% | |
| GTATTGCATCAGCCAGATGT+GGG | + | chr3.1:87659200-87659219 | None:intergenic | 45.0% | |
| GTTCAAGGCTTATCTGGTAC+TGG | - | chr3.1:87656653-87656672 | MS.gene014664:CDS | 45.0% | |
| GTTCCTTACAGGACTTCTTG+AGG | - | chr3.1:87657086-87657105 | MS.gene014664:CDS | 45.0% | |
| TACTTGCCAACACCTACTTG+GGG | - | chr3.1:87656834-87656853 | MS.gene014664:intron | 45.0% | |
| TCACTACCTGTCCTTGAGAA+TGG | + | chr3.1:87658007-87658026 | None:intergenic | 45.0% | |
| TCTCCTGCGAGAATCTTTCA+AGG | - | chr3.1:87658330-87658349 | MS.gene014664:intron | 45.0% | |
| TGCAATGTGCAACATGTTGG+GGG | - | chr3.1:87658690-87658709 | MS.gene014664:CDS | 45.0% | |
| TGTATTGCATCAGCCAGATG+TGG | + | chr3.1:87659201-87659220 | None:intergenic | 45.0% | |
| TGTCTTACCCATCAGATGTC+AGG | + | chr3.1:87658520-87658539 | None:intergenic | 45.0% | |
| ! | ATTGTGCAGGAGGATTAGCA+TGG | - | chr3.1:87659152-87659171 | MS.gene014664:intron | 45.0% |
| ! | CGTTTGTTTGTTGCTGATGG+TGG | - | chr3.1:87657550-87657569 | MS.gene014664:CDS | 45.0% |
| ! | GGTAACTGTCGCTTACAACA+AGG | - | chr3.1:87655487-87655506 | MS.gene014664:intron | 45.0% |
| ! | GTCAAGATGGAAACTTGCTC+AGG | + | chr3.1:87658479-87658498 | None:intergenic | 45.0% |
| !! | GTACTGGTTCGCTAAGAGTT+GGG | - | chr3.1:87656669-87656688 | MS.gene014664:CDS | 45.0% |
| !! | TACTGGTTCGCTAAGAGTTG+GGG | - | chr3.1:87656670-87656689 | MS.gene014664:CDS | 45.0% |
| !! | ATTAGTTAAAAAAATATAAA+GGG | + | chr3.1:87656754-87656773 | None:intergenic | 5.0% |
| !! | TATTAGTTAAAAAAATATAA+AGG | + | chr3.1:87656755-87656774 | None:intergenic | 5.0% |
| !!! | AAGAATTTTTTTTTTTTTTT+TGG | + | chr3.1:87656556-87656575 | None:intergenic | 5.0% |
| ACACAAGGGGTTTACCTTCC+TGG | + | chr3.1:87656168-87656187 | None:intergenic | 50.0% | |
| ACACCGAGGATAGGATCTTC+AGG | + | chr3.1:87655047-87655066 | None:intergenic | 50.0% | |
| ACACGAGGGCTTGACTTTCA+AGG | - | chr3.1:87656924-87656943 | MS.gene014664:intron | 50.0% | |
| ACGAACGAGATGAGCGAAGA+CGG | + | chr3.1:87655021-87655040 | None:intergenic | 50.0% | |
| ACGGAATCAGAAGAAGCGGT+TGG | + | chr3.1:87655002-87655021 | None:intergenic | 50.0% | |
| ACTATGCTCCAGCAACACGA+GGG | - | chr3.1:87656910-87656929 | MS.gene014664:intron | 50.0% | |
| AGTCAGCGGATGTTTCAAGC+AGG | - | chr3.1:87657905-87657924 | MS.gene014664:intron | 50.0% | |
| ATACTTCTGCTTCCCTTGGC+TGG | - | chr3.1:87658033-87658052 | MS.gene014664:intron | 50.0% | |
| CAGCATGGTACGCAAGCTAT+AGG | + | chr3.1:87658634-87658653 | None:intergenic | 50.0% | |
| CATATGTCCAAGTCCAGCCA+AGG | + | chr3.1:87658049-87658068 | None:intergenic | 50.0% | |
| CCCTTGTGTTGGATGTTGTG+AGG | - | chr3.1:87656179-87656198 | MS.gene014664:intron | 50.0% | |
| CTACCTGTCCTTGAGAATGG+CGG | + | chr3.1:87658004-87658023 | None:intergenic | 50.0% | |
| CTCCAAAACAGTCCCACATC+TGG | - | chr3.1:87659185-87659204 | MS.gene014664:CDS | 50.0% | |
| GCATGTGCACATAACCCTAC+TGG | - | chr3.1:87657150-87657169 | MS.gene014664:intron | 50.0% | |
| GCCCTGCTATTCAAGAGAAC+AGG | - | chr3.1:87656621-87656640 | MS.gene014664:CDS | 50.0% | |
| GCCTCACAACATCCAACACA+AGG | + | chr3.1:87656183-87656202 | None:intergenic | 50.0% | |
| GCCTGTGATACTTACCAGGA+AGG | - | chr3.1:87656151-87656170 | MS.gene014664:intron | 50.0% | |
| GCGTTGGATCAACACCAGTA+GGG | + | chr3.1:87657167-87657186 | None:intergenic | 50.0% | |
| GCTCCTGAAGATCCTATCCT+CGG | - | chr3.1:87655041-87655060 | MS.gene014664:intron | 50.0% | |
| GGAAGGTAAACCCCTTGTGT+TGG | - | chr3.1:87656168-87656187 | MS.gene014664:intron | 50.0% | |
| GTCAGCGGATGTTTCAAGCA+GGG | - | chr3.1:87657906-87657925 | MS.gene014664:intron | 50.0% | |
| GTCCTGTAAGGAACAAGGAG+GGG | + | chr3.1:87657080-87657099 | None:intergenic | 50.0% | |
| TACTATGCTCCAGCAACACG+AGG | - | chr3.1:87656909-87656928 | MS.gene014664:intron | 50.0% | |
| TCAGAAGAAGCGGTTGGAGA+AGG | + | chr3.1:87654996-87655015 | None:intergenic | 50.0% | |
| TCCTGTAAGGAACAAGGAGG+GGG | + | chr3.1:87657079-87657098 | None:intergenic | 50.0% | |
| TGATTGCCCCAAGTAGGTGT+TGG | + | chr3.1:87656843-87656862 | None:intergenic | 50.0% | |
| TGCTCCCATTGTTCAAGCGT+TGG | + | chr3.1:87657183-87657202 | None:intergenic | 50.0% | |
| ! | AGCCAGATGTGGGACTGTTT+TGG | + | chr3.1:87659190-87659209 | None:intergenic | 50.0% |
| ! | AGCGTTGGATCAACACCAGT+AGG | + | chr3.1:87657168-87657187 | None:intergenic | 50.0% |
| ! | CGATACGGTTCTGATGCTGA+TGG | - | chr3.1:87655285-87655304 | MS.gene014664:intron | 50.0% |
| ! | GTTCAACAGGGTTTTGCCAG+TGG | - | chr3.1:87657499-87657518 | MS.gene014664:CDS | 50.0% |
| ! | TGTTGGTGCTTACCGAACTG+AGG | - | chr3.1:87655538-87655557 | MS.gene014664:intron | 50.0% |
| !! | ACTGGTTCGCTAAGAGTTGG+GGG | - | chr3.1:87656671-87656690 | MS.gene014664:CDS | 50.0% |
| !! | GGTACTGGTTCGCTAAGAGT+TGG | - | chr3.1:87656668-87656687 | MS.gene014664:CDS | 50.0% |
| !! | TGCTGATGGTGGAGAATTGC+TGG | - | chr3.1:87657561-87657580 | MS.gene014664:CDS | 50.0% |
| AAGTCAAGCCCTCGTGTTGC+TGG | + | chr3.1:87656921-87656940 | None:intergenic | 55.0% | |
| CATTGTGGCCGCCATTCTCA+AGG | - | chr3.1:87657993-87658012 | MS.gene014664:CDS | 55.0% | |
| CTTGAGAATGGCGGCCACAA+TGG | + | chr3.1:87657995-87658014 | None:intergenic | 55.0% | |
| TCCCCCTCCTTGTTCCTTAC+AGG | - | chr3.1:87657075-87657094 | MS.gene014664:CDS | 55.0% | |
| ! | TGCAGGAGGATTAGCATGGC+TGG | - | chr3.1:87659156-87659175 | MS.gene014664:CDS | 55.0% |
| !! | ATCCGCTGACTTGCTGACCT+GGG | + | chr3.1:87657896-87657915 | None:intergenic | 55.0% |
| !! | GATCTTGGTTCTGCCCCATC+TGG | - | chr3.1:87657108-87657127 | MS.gene014664:intron | 55.0% |
| CTGCTTCCCTTGGCTGGACT+TGG | - | chr3.1:87658039-87658058 | MS.gene014664:intron | 60.0% | |
| TCCCCAGGTCAGCAAGTCAG+CGG | - | chr3.1:87657891-87657910 | MS.gene014664:intron | 60.0% | |
| TGGCCGCCATTCTCAAGGAC+AGG | - | chr3.1:87657998-87658017 | MS.gene014664:CDS | 60.0% | |
| !! | CATCCGCTGACTTGCTGACC+TGG | + | chr3.1:87657897-87657916 | None:intergenic | 60.0% |
| !! | TCCGCTGACTTGCTGACCTG+GGG | + | chr3.1:87657895-87657914 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 87654972 | 87659245 | 87654972 | ID=MS.gene014664 |
| chr3.1 | mRNA | 87654972 | 87659245 | 87654972 | ID=MS.gene014664.t1;Parent=MS.gene014664 |
| chr3.1 | exon | 87659153 | 87659245 | 87659153 | ID=MS.gene014664.t1.exon1;Parent=MS.gene014664.t1 |
| chr3.1 | CDS | 87659153 | 87659245 | 87659153 | ID=cds.MS.gene014664.t1;Parent=MS.gene014664.t1 |
| chr3.1 | exon | 87658658 | 87658729 | 87658658 | ID=MS.gene014664.t1.exon2;Parent=MS.gene014664.t1 |
| chr3.1 | CDS | 87658658 | 87658729 | 87658658 | ID=cds.MS.gene014664.t1;Parent=MS.gene014664.t1 |
| chr3.1 | exon | 87657987 | 87658048 | 87657987 | ID=MS.gene014664.t1.exon3;Parent=MS.gene014664.t1 |
| chr3.1 | CDS | 87657987 | 87658048 | 87657987 | ID=cds.MS.gene014664.t1;Parent=MS.gene014664.t1 |
| chr3.1 | exon | 87657807 | 87657890 | 87657807 | ID=MS.gene014664.t1.exon4;Parent=MS.gene014664.t1 |
| chr3.1 | CDS | 87657807 | 87657890 | 87657807 | ID=cds.MS.gene014664.t1;Parent=MS.gene014664.t1 |
| chr3.1 | exon | 87657496 | 87657595 | 87657496 | ID=MS.gene014664.t1.exon5;Parent=MS.gene014664.t1 |
| chr3.1 | CDS | 87657496 | 87657595 | 87657496 | ID=cds.MS.gene014664.t1;Parent=MS.gene014664.t1 |
| chr3.1 | exon | 87657272 | 87657392 | 87657272 | ID=MS.gene014664.t1.exon6;Parent=MS.gene014664.t1 |
| chr3.1 | CDS | 87657272 | 87657392 | 87657272 | ID=cds.MS.gene014664.t1;Parent=MS.gene014664.t1 |
| chr3.1 | exon | 87656957 | 87657120 | 87656957 | ID=MS.gene014664.t1.exon7;Parent=MS.gene014664.t1 |
| chr3.1 | CDS | 87656957 | 87657120 | 87656957 | ID=cds.MS.gene014664.t1;Parent=MS.gene014664.t1 |
| chr3.1 | exon | 87656572 | 87656709 | 87656572 | ID=MS.gene014664.t1.exon8;Parent=MS.gene014664.t1 |
| chr3.1 | CDS | 87656572 | 87656709 | 87656572 | ID=cds.MS.gene014664.t1;Parent=MS.gene014664.t1 |
| chr3.1 | exon | 87656198 | 87656319 | 87656198 | ID=MS.gene014664.t1.exon9;Parent=MS.gene014664.t1 |
| chr3.1 | CDS | 87656198 | 87656319 | 87656198 | ID=cds.MS.gene014664.t1;Parent=MS.gene014664.t1 |
| chr3.1 | exon | 87656025 | 87656119 | 87656025 | ID=MS.gene014664.t1.exon10;Parent=MS.gene014664.t1 |
| chr3.1 | CDS | 87656025 | 87656119 | 87656025 | ID=cds.MS.gene014664.t1;Parent=MS.gene014664.t1 |
| chr3.1 | exon | 87655686 | 87655806 | 87655686 | ID=MS.gene014664.t1.exon11;Parent=MS.gene014664.t1 |
| chr3.1 | CDS | 87655686 | 87655806 | 87655686 | ID=cds.MS.gene014664.t1;Parent=MS.gene014664.t1 |
| chr3.1 | exon | 87654972 | 87655056 | 87654972 | ID=MS.gene014664.t1.exon12;Parent=MS.gene014664.t1 |
| chr3.1 | CDS | 87654972 | 87655056 | 87654972 | ID=cds.MS.gene014664.t1;Parent=MS.gene014664.t1 |
| Gene Sequence |
| Protein sequence |
