Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014854.t1 | XP_003603365.2 | 93.6 | 691 | 37 | 3 | 5 | 689 | 31 | 720 | 0.00E+00 | 1182.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014854.t1 | F4JTJ2 | 52.1 | 689 | 300 | 14 | 5 | 679 | 32 | 704 | 1.0e-157 | 558.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014854.t1 | G7JAH7 | 93.3 | 672 | 38 | 3 | 5 | 670 | 31 | 701 | 0.0e+00 | 1146.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene067420 | MS.gene014854 | PPI |
| MS.gene86422 | MS.gene014854 | PPI |
| MS.gene83547 | MS.gene014854 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014854.t1 | MTR_3g106770 | 93.304 | 672 | 38 | 3 | 5 | 670 | 31 | 701 | 0.0 | 1243 |
| MS.gene014854.t1 | MTR_3g106770 | 97.084 | 583 | 17 | 0 | 88 | 670 | 1 | 583 | 0.0 | 1135 |
| MS.gene014854.t1 | MTR_2g104070 | 45.283 | 636 | 295 | 9 | 37 | 671 | 99 | 682 | 9.81e-150 | 451 |
| MS.gene014854.t1 | MTR_2g104070 | 44.463 | 596 | 278 | 9 | 77 | 671 | 2 | 545 | 1.95e-130 | 397 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014854.t1 | AT4G32160 | 52.104 | 689 | 300 | 13 | 5 | 679 | 32 | 704 | 0.0 | 611 |
| MS.gene014854.t1 | AT2G25350 | 46.037 | 656 | 305 | 10 | 5 | 654 | 31 | 643 | 9.06e-170 | 501 |
| MS.gene014854.t1 | AT2G25350 | 49.652 | 574 | 266 | 7 | 5 | 572 | 31 | 587 | 3.55e-168 | 498 |
| MS.gene014854.t1 | AT2G25350 | 50.554 | 542 | 245 | 7 | 5 | 540 | 31 | 555 | 1.06e-164 | 485 |
| MS.gene014854.t1 | AT2G25350 | 50.554 | 542 | 245 | 7 | 5 | 540 | 31 | 555 | 1.06e-164 | 485 |
| MS.gene014854.t1 | AT2G25350 | 50.435 | 460 | 205 | 7 | 5 | 458 | 31 | 473 | 1.19e-135 | 408 |
| MS.gene014854.t1 | AT3G15920 | 38.405 | 677 | 358 | 13 | 6 | 670 | 92 | 721 | 6.24e-131 | 404 |
Find 139 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTCACATTTCTCCTTTA+TGG | 0.098755 | 3.3:-87560601 | None:intergenic |
| TCATATGATTCTTCACTTCT+AGG | 0.124218 | 3.3:+87559496 | MS.gene014854:CDS |
| GGTAGTGACATGTCTAATTT+TGG | 0.135817 | 3.3:+87559625 | MS.gene014854:CDS |
| TATTGATGAGGGTTTGTTTA+TGG | 0.150863 | 3.3:+87559375 | MS.gene014854:CDS |
| GCCTGGGCATGCTAAAGTTT+TGG | 0.180319 | 3.3:+87559546 | MS.gene014854:CDS |
| CACCGAATAATCCGTGTTAT+TGG | 0.207210 | 3.3:-87559143 | None:intergenic |
| TTATCATCCTGTCCAATTCT+TGG | 0.267529 | 3.3:-87559268 | None:intergenic |
| TCATCTGTTGCGTCAGATTA+TGG | 0.273295 | 3.3:+87559208 | MS.gene014854:CDS |
| GATGGCTCTGTCGACCTTCC+TGG | 0.289026 | 3.3:+87559667 | MS.gene014854:CDS |
| ATTGATGAGGGTTTGTTTAT+GGG | 0.291776 | 3.3:+87559376 | MS.gene014854:CDS |
| GAGCCATCACCAGATGAATT+TGG | 0.300939 | 3.3:-87559652 | None:intergenic |
| GATCATATCAGATTTGTTCT+TGG | 0.302019 | 3.3:+87561461 | MS.gene014854:CDS |
| ATCTGTTCAGGTCAAGGATT+TGG | 0.309445 | 3.3:+87560085 | MS.gene014854:intron |
| ATAGAGAAACTTGTAAAATA+TGG | 0.311589 | 3.3:+87559343 | MS.gene014854:CDS |
| CAAGGGAGATATTAAAGTTC+TGG | 0.313417 | 3.3:+87560518 | MS.gene014854:CDS |
| GTTCCTTCTTCAATTCTGTT+TGG | 0.316758 | 3.3:-87560569 | None:intergenic |
| TTCCTTCTTCAATTCTGTTT+GGG | 0.323271 | 3.3:-87560568 | None:intergenic |
| TACTCAAATGCAATGGGATA+TGG | 0.328309 | 3.3:+87560184 | MS.gene014854:CDS |
| GCAGAACGATGTGCTGTTGC+AGG | 0.334516 | 3.3:+87560428 | MS.gene014854:CDS |
| CTTGATTTAATCTAACTATA+AGG | 0.336717 | 3.3:-87559852 | None:intergenic |
| TGGATATTTGTAATCCCTTC+TGG | 0.337338 | 3.3:-87556885 | None:intergenic |
| GCTGTCTATGTAGCTTAAAA+AGG | 0.340648 | 3.3:+87557972 | MS.gene014854:intron |
| TTCCAATAACACGGATTATT+CGG | 0.345896 | 3.3:+87559141 | MS.gene014854:CDS |
| TACCAAATGGTCGATCCTGC+TGG | 0.355724 | 3.3:+87556437 | MS.gene014854:CDS |
| CGACCTTCCTGGATCTGCTT+CGG | 0.362574 | 3.3:+87559678 | MS.gene014854:CDS |
| TACAAGGCATGCTCTCAAAT+TGG | 0.362742 | 3.3:+87561518 | MS.gene014854:CDS |
| CACACAAAATTGAAAAGTTC+TGG | 0.370980 | 3.3:+87559727 | MS.gene014854:CDS |
| GCTACAGAGAAGGCGCTCTT+TGG | 0.378552 | 3.3:+87558867 | MS.gene014854:intron |
| TACATTAGAAGCTGCACTTC+CGG | 0.379999 | 3.3:-87561385 | None:intergenic |
| ATTGAAAAGCCGAGCTTTGT+TGG | 0.385083 | 3.3:+87558044 | MS.gene014854:CDS |
| GTGCAATCATCTCTCCATTC+GGG | 0.402724 | 3.3:+87559163 | MS.gene014854:CDS |
| TAGACGGAAGTCACTGGAAA+TGG | 0.403568 | 3.3:+87560214 | MS.gene014854:CDS |
| TTTCAATCGCATGAGTCCCT+TGG | 0.410016 | 3.3:-87558028 | None:intergenic |
| CAGAACTTTAATATCTCCCT+TGG | 0.410861 | 3.3:-87560517 | None:intergenic |
| GAAGTAGGAACTCCAAGAAT+TGG | 0.415171 | 3.3:+87559256 | MS.gene014854:CDS |
| AGTCCCTTGGGTGGCGCTGG+AGG | 0.415381 | 3.3:-87558015 | None:intergenic |
| ATCAATGTCAGACAATAGTT+TGG | 0.415454 | 3.3:-87558902 | None:intergenic |
| CTGCTAGTAGGATGTCAATT+TGG | 0.416430 | 3.3:-87561192 | None:intergenic |
| TTCAATCGCATGAGTCCCTT+GGG | 0.424288 | 3.3:-87558027 | None:intergenic |
| TTTGGGATTCCAAATTCATC+TGG | 0.424544 | 3.3:+87559643 | MS.gene014854:CDS |
| GGTGCAATCATCTCTCCATT+CGG | 0.424766 | 3.3:+87559162 | MS.gene014854:CDS |
| ACCCAGCAGGATCGACCATT+TGG | 0.430128 | 3.3:-87556439 | None:intergenic |
| CACTTCCGGTGTCCTTCTCT+AGG | 0.431799 | 3.3:-87561371 | None:intergenic |
| CGTAACATTGTTCACATGTC+TGG | 0.436461 | 3.3:-87559449 | None:intergenic |
| ACTATTCTAGAGCAATTAGA+AGG | 0.436847 | 3.3:+87559403 | MS.gene014854:CDS |
| ATGAGTCCCTTGGGTGGCGC+TGG | 0.437452 | 3.3:-87558018 | None:intergenic |
| CTTGAAACCGAAGCAGATCC+AGG | 0.444794 | 3.3:-87559685 | None:intergenic |
| TGAAAGAGAAAAGAGTGAAC+AGG | 0.451485 | 3.3:+87561012 | MS.gene014854:CDS |
| GGAACTTAGTGAGTCCATAA+AGG | 0.452089 | 3.3:+87560587 | MS.gene014854:CDS |
| GTCCCTTGGGTGGCGCTGGA+GGG | 0.458980 | 3.3:-87558014 | None:intergenic |
| TAATCCGTGTTATTGGAATC+AGG | 0.462417 | 3.3:-87559136 | None:intergenic |
| TCATTAAAGGACAGTTCTAC+AGG | 0.462888 | 3.3:+87556841 | MS.gene014854:intron |
| CAGGATGATAATTCTGAAGT+TGG | 0.463087 | 3.3:+87559280 | MS.gene014854:CDS |
| ATCAACGCAATAAACTGAAC+AGG | 0.468232 | 3.3:+87559776 | MS.gene014854:CDS |
| AGACATGTGAACAATGTTAC+GGG | 0.471076 | 3.3:+87559451 | MS.gene014854:CDS |
| ACAGAGAAGGCGCTCTTTGG+AGG | 0.477031 | 3.3:+87558870 | MS.gene014854:intron |
| AAGATTTACTCAAATGCAAT+GGG | 0.480298 | 3.3:+87560178 | MS.gene014854:CDS |
| TCGGGCTTATCATTAGCTGC+TGG | 0.487638 | 3.3:+87559181 | MS.gene014854:CDS |
| ACCAAATGGTCGATCCTGCT+GGG | 0.492083 | 3.3:+87556438 | MS.gene014854:CDS |
| GATGAAACTTAAGTCTGAAT+CGG | 0.495271 | 3.3:+87560238 | MS.gene014854:CDS |
| TATTAAAGTTCTGGTTAAAG+AGG | 0.500220 | 3.3:+87560527 | MS.gene014854:CDS |
| AAGCTTTCAAATGAAAGTGT+TGG | 0.501521 | 3.3:+87559580 | MS.gene014854:CDS |
| AATGAAAGTGTTGGAAGTGA+TGG | 0.501811 | 3.3:+87559589 | MS.gene014854:CDS |
| TTCAAGAGAAACAGATATTG+TGG | 0.502530 | 3.3:+87559702 | MS.gene014854:CDS |
| TCAATTCTGTTTGGGAACTA+CGG | 0.503298 | 3.3:-87560560 | None:intergenic |
| CTGGCATTTACTTTATGCCT+AGG | 0.504098 | 3.3:-87559430 | None:intergenic |
| AAGCCGAGCTTTGTTGGAAG+AGG | 0.504103 | 3.3:+87558050 | MS.gene014854:CDS |
| AGATGCTGCTAGAGAGCAGC+TGG | 0.507403 | 3.3:+87560455 | MS.gene014854:CDS |
| GATCGTTTACTGAATTCTGC+TGG | 0.511534 | 3.3:-87559114 | None:intergenic |
| CAGACATGTGAACAATGTTA+CGG | 0.513568 | 3.3:+87559450 | MS.gene014854:CDS |
| CAACCTCTTCCAACAAAGCT+CGG | 0.515780 | 3.3:-87558053 | None:intergenic |
| CATCCCTCCAGCGCCACCCA+AGG | 0.522811 | 3.3:+87558011 | MS.gene014854:CDS |
| GTGAACAGGCAGAAACTGCT+TGG | 0.523674 | 3.3:+87561026 | MS.gene014854:CDS |
| TGAACCTTCTTAGTACTCCA+TGG | 0.524087 | 3.3:-87556905 | None:intergenic |
| AAAGATTTACTCAAATGCAA+TGG | 0.527444 | 3.3:+87560177 | MS.gene014854:CDS |
| ACTACTAGAAGCAGATTGAC+TGG | 0.531575 | 3.3:-87556515 | None:intergenic |
| TTCTTTCGACCATGCAGAGA+AGG | 0.532922 | 3.3:+87559800 | MS.gene014854:CDS |
| AGGAACTCCAAGAATTGGAC+AGG | 0.533535 | 3.3:+87559261 | MS.gene014854:CDS |
| TAACTTGTACCTCTGCTAGT+AGG | 0.539656 | 3.3:-87561204 | None:intergenic |
| GGAACTTAGACGGAAGTCAC+TGG | 0.542430 | 3.3:+87560208 | MS.gene014854:CDS |
| ATCCCTCCAGCGCCACCCAA+GGG | 0.543505 | 3.3:+87558012 | MS.gene014854:CDS |
| AAATCAAGAAATAGCTGCAA+AGG | 0.546074 | 3.3:+87559867 | MS.gene014854:CDS |
| TGATACCAGGATGGAAATGT+TGG | 0.546262 | 3.3:+87560375 | MS.gene014854:intron |
| AGAAAACAGCTTGAGAAATG+TGG | 0.546835 | 3.3:+87561049 | MS.gene014854:CDS |
| GGCATATCAAATATTGATGA+GGG | 0.547371 | 3.3:+87559364 | MS.gene014854:CDS |
| CCCAAAACTTTAGCATGCCC+AGG | 0.547727 | 3.3:-87559547 | None:intergenic |
| AAAACCAATGACATAAAAGA+TGG | 0.549854 | 3.3:+87561411 | MS.gene014854:CDS |
| AACAGACAAACCGTGTTACA+AGG | 0.550327 | 3.3:+87561502 | MS.gene014854:CDS |
| AGCAATTAGAAGGACTTCCT+AGG | 0.550544 | 3.3:+87559413 | MS.gene014854:CDS |
| GCTGGAGGGATGTTTCTCCT+TGG | 0.553615 | 3.3:-87558000 | None:intergenic |
| CCATACGATGCATCGGAAGT+AGG | 0.554564 | 3.3:+87559241 | MS.gene014854:CDS |
| TCAAGAGAAACAGATATTGT+GGG | 0.554679 | 3.3:+87559703 | MS.gene014854:CDS |
| AAATAAGGAGAACTTGCAGC+AGG | 0.557345 | 3.3:+87560136 | MS.gene014854:CDS |
| GAAGGCGCTCTTTGGAGGAG+TGG | 0.558280 | 3.3:+87558875 | MS.gene014854:CDS |
| GAAAACAGCTTGAGAAATGT+GGG | 0.559042 | 3.3:+87561050 | MS.gene014854:CDS |
| GCTACAAAAGTGAACCCAGC+AGG | 0.559241 | 3.3:-87556452 | None:intergenic |
| GAAGGGATTACAAATATCCA+TGG | 0.563612 | 3.3:+87556888 | MS.gene014854:CDS |
| AGCAGGCTATTCTGATTGAG+AGG | 0.569251 | 3.3:+87560153 | MS.gene014854:CDS |
| CCTACTTCCGATGCATCGTA+TGG | 0.569440 | 3.3:-87559241 | None:intergenic |
| ATATCCATGGAGTACTAAGA+AGG | 0.570085 | 3.3:+87556901 | MS.gene014854:CDS |
| AGTGACTAGCCTTCTCTGCA+TGG | 0.570494 | 3.3:-87559809 | None:intergenic |
| TTCCTTACGAAGATGAGGAC+AGG | 0.574686 | 3.3:+87561110 | MS.gene014854:CDS |
| GTCCTGTCCTCATCTTCGTA+AGG | 0.577035 | 3.3:-87561112 | None:intergenic |
| TTCCCAAACAGAATTGAAGA+AGG | 0.577388 | 3.3:+87560566 | MS.gene014854:CDS |
| AGTTTATTGCGTTGATCTAG+CGG | 0.578865 | 3.3:-87559769 | None:intergenic |
| ATTCCAAATTCATCTGGTGA+TGG | 0.581544 | 3.3:+87559649 | MS.gene014854:CDS |
| TGGCATATCAAATATTGATG+AGG | 0.588442 | 3.3:+87559363 | MS.gene014854:CDS |
| TATTGCGTTGATCTAGCGGA+AGG | 0.591173 | 3.3:-87559765 | None:intergenic |
| TCAAATGCAATGGGATATGG+AGG | 0.591718 | 3.3:+87560187 | MS.gene014854:CDS |
| CGATCCTGATTCCAATAACA+CGG | 0.596415 | 3.3:+87559132 | MS.gene014854:CDS |
| AATCGCATGAGTCCCTTGGG+TGG | 0.600840 | 3.3:-87558024 | None:intergenic |
| TGATATATCAAGATGTGCAT+CGG | 0.601858 | 3.3:+87558921 | MS.gene014854:CDS |
| CAGCTAATGATAAGCCCGAA+TGG | 0.603033 | 3.3:-87559177 | None:intergenic |
| AAAGGAGAAATGTGAAGCTG+AGG | 0.606470 | 3.3:+87560605 | MS.gene014854:CDS |
| AGAGCTAGAAGCAAAATCCA+AGG | 0.606575 | 3.3:+87560500 | MS.gene014854:CDS |
| TGATACTCCATACGATGCAT+CGG | 0.607028 | 3.3:+87559234 | MS.gene014854:CDS |
| TGAGAGCATGCCTTGTAACA+CGG | 0.610568 | 3.3:-87561512 | None:intergenic |
| ACGGGGAAGGACAGAAGTAA+TGG | 0.612467 | 3.3:+87559469 | MS.gene014854:CDS |
| GAGCTAGAAGCAAAATCCAA+GGG | 0.616666 | 3.3:+87560501 | MS.gene014854:CDS |
| TGATCTTCCTTACGAAGATG+AGG | 0.618623 | 3.3:+87561105 | MS.gene014854:CDS |
| TGTTGGTCAGAATTTGACAA+AGG | 0.626931 | 3.3:+87560392 | MS.gene014854:CDS |
| TGTGAACAATGTTACGGGGA+AGG | 0.627354 | 3.3:+87559456 | MS.gene014854:CDS |
| GGGATATGGAGGAACTTAGA+CGG | 0.628005 | 3.3:+87560198 | MS.gene014854:CDS |
| CAGTTCTACAGGCTTCAAGT+TGG | 0.629348 | 3.3:+87556852 | MS.gene014854:CDS |
| GCAGGCTATTCTGATTGAGA+GGG | 0.632177 | 3.3:+87560154 | MS.gene014854:CDS |
| TCAGGTAGAAAACCTAGAGA+AGG | 0.633522 | 3.3:+87561359 | MS.gene014854:intron |
| GTTGGTATACAATCACCAGA+AGG | 0.635623 | 3.3:+87556870 | MS.gene014854:CDS |
| TTGGTATACAATCACCAGAA+GGG | 0.638434 | 3.3:+87556871 | MS.gene014854:CDS |
| AAACCGAAGCAGATCCAGGA+AGG | 0.639921 | 3.3:-87559681 | None:intergenic |
| AATTGACATCCTACTAGCAG+AGG | 0.643598 | 3.3:+87561195 | MS.gene014854:CDS |
| TATATCAAGATGTGCATCGG+TGG | 0.647391 | 3.3:+87558924 | MS.gene014854:CDS |
| AGGCTGAGAGAAAAGCTCCA+TGG | 0.658284 | 3.3:-87559527 | None:intergenic |
| ACTTCTAGGTAATAATACCA+TGG | 0.661220 | 3.3:+87559510 | MS.gene014854:CDS |
| GACTGGAATAGAGTATAATG+TGG | 0.693469 | 3.3:-87556498 | None:intergenic |
| GAAAACCTAGAGAAGGACAC+CGG | 0.699203 | 3.3:+87561366 | MS.gene014854:CDS |
| GTGACAAGTGCCCCACAAGA+CGG | 0.701593 | 3.3:-87556476 | None:intergenic |
| GACATGTGAACAATGTTACG+GGG | 0.707256 | 3.3:+87559452 | MS.gene014854:CDS |
| ATAAAAGATGGTGTAATCTG+TGG | 0.709015 | 3.3:+87561423 | MS.gene014854:CDS |
| AGTGATGGAAGCTCAATACG+AGG | 0.752524 | 3.3:+87559604 | MS.gene014854:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGATTATTCTAAATTATT+TGG | + | chr3.3:87558616-87558635 | MS.gene014854:intron | 10.0% |
| !!! | ATCTTTATTTATACATAATA+AGG | - | chr3.3:87558602-87558621 | None:intergenic | 10.0% |
| !! | AACAACATACTATAAATAAA+TGG | - | chr3.3:87556785-87556804 | None:intergenic | 15.0% |
| !! | ATAAATATATCTATAATCTG+TGG | + | chr3.3:87559999-87560018 | MS.gene014854:intron | 15.0% |
| !! | TCTATATAAAAGATAAACTT+AGG | + | chr3.3:87556722-87556741 | MS.gene014854:intron | 15.0% |
| !! | TTAATTACTTTATACAAACA+TGG | + | chr3.3:87558154-87558173 | MS.gene014854:intron | 15.0% |
| !!! | ATATTTAACTTTTCTCTTTT+GGG | + | chr3.3:87560309-87560328 | MS.gene014854:intron | 15.0% |
| !!! | TTCATTTTTAACATCATTAA+AGG | + | chr3.3:87556828-87556847 | MS.gene014854:intron | 15.0% |
| !! | AAAATGTAACAAACATTTAG+TGG | + | chr3.3:87561574-87561593 | MS.gene014854:CDS | 20.0% |
| !! | AAATTCAAAATAAGAAAGGA+AGG | - | chr3.3:87560763-87560782 | None:intergenic | 20.0% |
| !! | AATGGTTAAAAACACTTAAA+TGG | - | chr3.3:87557110-87557129 | None:intergenic | 20.0% |
| !! | ACTTATACTTTGTCTATTAA+AGG | + | chr3.3:87557364-87557383 | MS.gene014854:intron | 20.0% |
| !! | ATAGAGAAACTTGTAAAATA+TGG | + | chr3.3:87559343-87559362 | MS.gene014854:CDS | 20.0% |
| !! | ATATAAAAGATAAACTTAGG+TGG | + | chr3.3:87556725-87556744 | MS.gene014854:intron | 20.0% |
| !! | CAACAAATTCAAAATAAGAA+AGG | - | chr3.3:87560767-87560786 | None:intergenic | 20.0% |
| !! | CATTCTATTCATTAATCATA+AGG | - | chr3.3:87557638-87557657 | None:intergenic | 20.0% |
| !! | CTTATGATTAATGAATAGAA+TGG | + | chr3.3:87557636-87557655 | MS.gene014854:intron | 20.0% |
| !! | CTTGATTTAATCTAACTATA+AGG | - | chr3.3:87559855-87559874 | None:intergenic | 20.0% |
| !!! | AATAAAATTAAATGGCTTTG+TGG | - | chr3.3:87557146-87557165 | None:intergenic | 20.0% |
| !!! | ATTAAGCTTAGATTTTCAAA+TGG | + | chr3.3:87560873-87560892 | MS.gene014854:intron | 20.0% |
| !!! | ATTTTGAATTTGTTGTGTTA+TGG | + | chr3.3:87560772-87560791 | MS.gene014854:intron | 20.0% |
| !!! | CTTGTATGTGATTTTTTTTT+TGG | + | chr3.3:87558980-87558999 | MS.gene014854:intron | 20.0% |
| !!! | GATATTTAACTTTTCTCTTT+TGG | + | chr3.3:87560308-87560327 | MS.gene014854:intron | 20.0% |
| !!! | TATTTAACTTTTCTCTTTTG+GGG | + | chr3.3:87560310-87560329 | MS.gene014854:intron | 20.0% |
| !!! | TATTTTACAAGTTTCTCTAT+TGG | - | chr3.3:87559343-87559362 | None:intergenic | 20.0% |
| !!! | TCATCCTACATAAATTTTAA+AGG | - | chr3.3:87557304-87557323 | None:intergenic | 20.0% |
| !!! | TCTCAATATTTTTTGTAATG+AGG | + | chr3.3:87558647-87558666 | MS.gene014854:intron | 20.0% |
| !!! | TTAAGCTTAGATTTTCAAAT+GGG | + | chr3.3:87560874-87560893 | MS.gene014854:intron | 20.0% |
| !!! | TTTGTTACATTTTCAATAGA+AGG | - | chr3.3:87561567-87561586 | None:intergenic | 20.0% |
| !!! | TTTTGAATTTGTTGTGTTAT+GGG | + | chr3.3:87560773-87560792 | MS.gene014854:intron | 20.0% |
| ! | AAAACCAATGACATAAAAGA+TGG | + | chr3.3:87561411-87561430 | MS.gene014854:CDS | 25.0% |
| ! | AAAGATTTACTCAAATGCAA+TGG | + | chr3.3:87560177-87560196 | MS.gene014854:CDS | 25.0% |
| ! | AACTACCAAGCAAAAAAATA+AGG | + | chr3.3:87560121-87560140 | MS.gene014854:CDS | 25.0% |
| ! | AAGATTTACTCAAATGCAAT+GGG | + | chr3.3:87560178-87560197 | MS.gene014854:CDS | 25.0% |
| ! | ACAAGTTCTGTAAATATAGA+AGG | - | chr3.3:87561329-87561348 | None:intergenic | 25.0% |
| ! | AGAAACCAATATTAACTTTG+AGG | + | chr3.3:87557572-87557591 | MS.gene014854:intron | 25.0% |
| ! | AGTAATTAAATTCAAGCAAG+AGG | - | chr3.3:87558143-87558162 | None:intergenic | 25.0% |
| ! | ATGAGGTTCTTATTATTCTT+AGG | + | chr3.3:87558664-87558683 | MS.gene014854:intron | 25.0% |
| ! | CAAGTTCTGTAAATATAGAA+GGG | - | chr3.3:87561328-87561347 | None:intergenic | 25.0% |
| ! | GAAAATTACAAGTTACTGAA+AGG | - | chr3.3:87558427-87558446 | None:intergenic | 25.0% |
| ! | GGGAGATGTTAAATAATATT+TGG | - | chr3.3:87558287-87558306 | None:intergenic | 25.0% |
| ! | GTTCTTATTATTCTTAGGTA+AGG | + | chr3.3:87558669-87558688 | MS.gene014854:intron | 25.0% |
| ! | TAGTTTACCAAAATGGTATA+AGG | - | chr3.3:87557338-87557357 | None:intergenic | 25.0% |
| ! | TAGTTTAGAAGTTTCAAAAC+AGG | + | chr3.3:87557513-87557532 | MS.gene014854:intron | 25.0% |
| ! | TATACATAATAAGGAGAACA+TGG | - | chr3.3:87558593-87558612 | None:intergenic | 25.0% |
| ! | TCAAGTATTTATTAGTTCCA+AGG | + | chr3.3:87557765-87557784 | MS.gene014854:intron | 25.0% |
| ! | TGAAAACAATTACAAGTTCT+AGG | - | chr3.3:87558462-87558481 | None:intergenic | 25.0% |
| ! | TGTGGTTGAAAATAAACTAA+TGG | - | chr3.3:87557128-87557147 | None:intergenic | 25.0% |
| ! | TTAAAGGATTAAACCTTCTT+TGG | + | chr3.3:87557380-87557399 | MS.gene014854:intron | 25.0% |
| ! | TTACTAGCATGTTGAAAATT+AGG | + | chr3.3:87558200-87558219 | MS.gene014854:intron | 25.0% |
| ! | TTATCTATCTCTATCATACA+GGG | - | chr3.3:87557891-87557910 | None:intergenic | 25.0% |
| ! | TTGATTGAAGTTCAGAAATA+AGG | - | chr3.3:87560916-87560935 | None:intergenic | 25.0% |
| ! | TTTATCTATCTCTATCATAC+AGG | - | chr3.3:87557892-87557911 | None:intergenic | 25.0% |
| !! | AAATCTAAAACAGAGATATG+AGG | - | chr3.3:87558241-87558260 | None:intergenic | 25.0% |
| !! | AACTACATTGATACTGTTTT+TGG | - | chr3.3:87557498-87557517 | None:intergenic | 25.0% |
| !! | ACAGGAAATCTTTAGAAAAT+TGG | + | chr3.3:87557531-87557550 | MS.gene014854:intron | 25.0% |
| !! | ACTAATATACATGAGTTGAA+TGG | + | chr3.3:87558814-87558833 | MS.gene014854:intron | 25.0% |
| !! | ATTTTGTATTATCTGTCAAG+AGG | - | chr3.3:87560665-87560684 | None:intergenic | 25.0% |
| !! | CTAATATACATGAGTTGAAT+GGG | + | chr3.3:87558815-87558834 | MS.gene014854:intron | 25.0% |
| !! | GAAATTTTGTCAAAACAGTA+TGG | + | chr3.3:87560477-87560496 | MS.gene014854:CDS | 25.0% |
| !! | GAACTTGTTTAAATTTGTTC+AGG | + | chr3.3:87561341-87561360 | MS.gene014854:intron | 25.0% |
| !! | TATTAAAGTTCTGGTTAAAG+AGG | + | chr3.3:87560527-87560546 | MS.gene014854:CDS | 25.0% |
| !! | TTGATTTTTATAGAAGTGAC+TGG | + | chr3.3:87560062-87560081 | MS.gene014854:intron | 25.0% |
| !!! | AATTTTAAAGGCAGTAGAAA+TGG | - | chr3.3:87557292-87557311 | None:intergenic | 25.0% |
| !!! | ACTGCCTTTAAAATTTATGT+AGG | + | chr3.3:87557297-87557316 | MS.gene014854:intron | 25.0% |
| !!! | ATTTTCATGTATTTCTACTC+TGG | + | chr3.3:87556997-87557016 | MS.gene014854:intron | 25.0% |
| !!! | CTTATCGTTGATTTCAAAAA+TGG | + | chr3.3:87560334-87560353 | MS.gene014854:intron | 25.0% |
| !!! | TACAAGTTATCATTTTTCTG+TGG | + | chr3.3:87561218-87561237 | MS.gene014854:intron | 25.0% |
| !!! | TACTATAAATAAATGGACTG+TGG | - | chr3.3:87556778-87556797 | None:intergenic | 25.0% |
| AAATCAAGAAATAGCTGCAA+AGG | + | chr3.3:87559867-87559886 | MS.gene014854:CDS | 30.0% | |
| AACATATAAGTCATGCATTC+AGG | - | chr3.3:87560947-87560966 | None:intergenic | 30.0% | |
| AATACCAATTGTTGCATGTT+TGG | + | chr3.3:87558097-87558116 | MS.gene014854:intron | 30.0% | |
| AATGAGAACTCAGAGAATAA+TGG | + | chr3.3:87557449-87557468 | MS.gene014854:intron | 30.0% | |
| ACATATAAGTCATGCATTCA+GGG | - | chr3.3:87560946-87560965 | None:intergenic | 30.0% | |
| ACCAAAATGGTATAAGGATA+AGG | - | chr3.3:87557332-87557351 | None:intergenic | 30.0% | |
| ACTCATGTATATTAGTGTAC+AGG | - | chr3.3:87558810-87558829 | None:intergenic | 30.0% | |
| ACTGTTATACATATGATACC+AGG | + | chr3.3:87560362-87560381 | MS.gene014854:intron | 30.0% | |
| ACTTCTAGGTAATAATACCA+TGG | + | chr3.3:87559510-87559529 | MS.gene014854:CDS | 30.0% | |
| AGCTTAAAAAGGAATTTCCA+AGG | + | chr3.3:87557983-87558002 | MS.gene014854:intron | 30.0% | |
| ATAAAAGATGGTGTAATCTG+TGG | + | chr3.3:87561423-87561442 | MS.gene014854:CDS | 30.0% | |
| ATACCAATTGTTGCATGTTT+GGG | + | chr3.3:87558098-87558117 | MS.gene014854:intron | 30.0% | |
| ATCAATGTCAGACAATAGTT+TGG | - | chr3.3:87558905-87558924 | None:intergenic | 30.0% | |
| ATCTTGTGGTTAGGTTAAAA+AGG | - | chr3.3:87558524-87558543 | None:intergenic | 30.0% | |
| CACACAAAATTGAAAAGTTC+TGG | + | chr3.3:87559727-87559746 | MS.gene014854:CDS | 30.0% | |
| CCAAAATGGTATAAGGATAA+GGG | - | chr3.3:87557331-87557350 | None:intergenic | 30.0% | |
| CTTAGGCATTAATGATTTAC+AGG | + | chr3.3:87556748-87556767 | MS.gene014854:intron | 30.0% | |
| GATGAAACTTAAGTCTGAAT+CGG | + | chr3.3:87560238-87560257 | MS.gene014854:CDS | 30.0% | |
| GGCATATCAAATATTGATGA+GGG | + | chr3.3:87559364-87559383 | MS.gene014854:CDS | 30.0% | |
| TCAAGAGAAACAGATATTGT+GGG | + | chr3.3:87559703-87559722 | MS.gene014854:CDS | 30.0% | |
| TCATATGATTCTTCACTTCT+AGG | + | chr3.3:87559496-87559515 | MS.gene014854:CDS | 30.0% | |
| TGATATATCAAGATGTGCAT+CGG | + | chr3.3:87558921-87558940 | MS.gene014854:CDS | 30.0% | |
| TGCTTCATAGTTTACCAAAA+TGG | - | chr3.3:87557345-87557364 | None:intergenic | 30.0% | |
| TGGCATATCAAATATTGATG+AGG | + | chr3.3:87559363-87559382 | MS.gene014854:CDS | 30.0% | |
| TGGGAAAATAGTCAACTAAT+CGG | - | chr3.3:87557949-87557968 | None:intergenic | 30.0% | |
| TTATACATATGATACCAGGA+TGG | + | chr3.3:87560366-87560385 | MS.gene014854:intron | 30.0% | |
| TTCAAGAGAAACAGATATTG+TGG | + | chr3.3:87559702-87559721 | MS.gene014854:CDS | 30.0% | |
| TTCCTTCTTCAATTCTGTTT+GGG | - | chr3.3:87560571-87560590 | None:intergenic | 30.0% | |
| TTTATTTATTCAGTAGCCTC+TGG | - | chr3.3:87559984-87560003 | None:intergenic | 30.0% | |
| ! | AAAGGATTTTCTTACGACAA+AGG | + | chr3.3:87559885-87559904 | MS.gene014854:CDS | 30.0% |
| ! | AACCAATATTAACTTTGAGG+CGG | + | chr3.3:87557575-87557594 | MS.gene014854:intron | 30.0% |
| ! | AAGCTTTCAAATGAAAGTGT+TGG | + | chr3.3:87559580-87559599 | MS.gene014854:CDS | 30.0% |
| ! | AGTTTTCTTGTACCTGAAAT+TGG | + | chr3.3:87559958-87559977 | MS.gene014854:intron | 30.0% |
| ! | ATTGATGAGGGTTTGTTTAT+GGG | + | chr3.3:87559376-87559395 | MS.gene014854:CDS | 30.0% |
| ! | CAGAACTTTTCAATTTTGTG+TGG | - | chr3.3:87559729-87559748 | None:intergenic | 30.0% |
| ! | GACTAATATTGTTTTCTCCT+TGG | - | chr3.3:87557785-87557804 | None:intergenic | 30.0% |
| ! | GATCATATCAGATTTGTTCT+TGG | + | chr3.3:87561461-87561480 | MS.gene014854:CDS | 30.0% |
| ! | GTAGTGACATGTCTAATTTT+GGG | + | chr3.3:87559626-87559645 | MS.gene014854:CDS | 30.0% |
| ! | TACACCATCTTTTATGTCAT+TGG | - | chr3.3:87561418-87561437 | None:intergenic | 30.0% |
| ! | TATTGATGAGGGTTTGTTTA+TGG | + | chr3.3:87559375-87559394 | MS.gene014854:CDS | 30.0% |
| ! | TCTCTTTGTGAAGTGTTATA+TGG | + | chr3.3:87560844-87560863 | MS.gene014854:intron | 30.0% |
| ! | TTCCAATAACACGGATTATT+CGG | + | chr3.3:87559141-87559160 | MS.gene014854:CDS | 30.0% |
| ! | TTTGAAGCAATGCTAGATAT+GGG | + | chr3.3:87557703-87557722 | MS.gene014854:intron | 30.0% |
| ! | TTTGTGAAGTGTTATATGGA+AGG | + | chr3.3:87560848-87560867 | MS.gene014854:intron | 30.0% |
| !! | ACATACAGAAAAGCTTTGAA+AGG | - | chr3.3:87560816-87560835 | None:intergenic | 30.0% |
| !! | ACTATTCTAGAGCAATTAGA+AGG | + | chr3.3:87559403-87559422 | MS.gene014854:CDS | 30.0% |
| !! | ATATTGGTTTCTTTCAGATC+TGG | - | chr3.3:87557564-87557583 | None:intergenic | 30.0% |
| !! | TAGTTGTTTCTTTCTGTCAT+TGG | + | chr3.3:87556534-87556553 | MS.gene014854:intron | 30.0% |
| !!! | GTTCTCCTTATTTTTTTGCT+TGG | - | chr3.3:87560129-87560148 | None:intergenic | 30.0% |
| !!! | TTTTGAAGCAATGCTAGATA+TGG | + | chr3.3:87557702-87557721 | MS.gene014854:intron | 30.0% |
| AACCAGAGAAAGTTACTGAA+AGG | - | chr3.3:87558491-87558510 | None:intergenic | 35.0% | |
| AAGATAAACTTAGGTGGCTT+AGG | + | chr3.3:87556731-87556750 | MS.gene014854:intron | 35.0% | |
| AATCCCAAACATGCAACAAT+TGG | - | chr3.3:87558104-87558123 | None:intergenic | 35.0% | |
| AATCTGACTGTGATGTTAGA+CGG | - | chr3.3:87558781-87558800 | None:intergenic | 35.0% | |
| AATGTGAAGACAAATCATGG+TGG | + | chr3.3:87557245-87557264 | MS.gene014854:intron | 35.0% | |
| AGAAAACAGCTTGAGAAATG+TGG | + | chr3.3:87561049-87561068 | MS.gene014854:CDS | 35.0% | |
| AGACATGTGAACAATGTTAC+GGG | + | chr3.3:87559451-87559470 | MS.gene014854:CDS | 35.0% | |
| AGCATTGCTTCAAAAAATGC+CGG | - | chr3.3:87557697-87557716 | None:intergenic | 35.0% | |
| AGCTTCACATTTCTCCTTTA+TGG | - | chr3.3:87560604-87560623 | None:intergenic | 35.0% | |
| AGTCACTGCAAAAACTGATA+TGG | + | chr3.3:87559825-87559844 | MS.gene014854:CDS | 35.0% | |
| ATACACGAGAAACACAAACA+TGG | - | chr3.3:87560974-87560993 | None:intergenic | 35.0% | |
| ATACAGTGTTCGATAGTTAC+AGG | + | chr3.3:87556609-87556628 | MS.gene014854:intron | 35.0% | |
| ATCAACGCAATAAACTGAAC+AGG | + | chr3.3:87559776-87559795 | MS.gene014854:CDS | 35.0% | |
| ATTCCAAATTCATCTGGTGA+TGG | + | chr3.3:87559649-87559668 | MS.gene014854:CDS | 35.0% | |
| CAAGGGAGATATTAAAGTTC+TGG | + | chr3.3:87560518-87560537 | MS.gene014854:CDS | 35.0% | |
| CAGAACTTTAATATCTCCCT+TGG | - | chr3.3:87560520-87560539 | None:intergenic | 35.0% | |
| CAGAATGTGAAGACAAATCA+TGG | + | chr3.3:87557242-87557261 | MS.gene014854:intron | 35.0% | |
| CAGACATGTGAACAATGTTA+CGG | + | chr3.3:87559450-87559469 | MS.gene014854:CDS | 35.0% | |
| CATGTATATTAGTGTACAGG+TGG | - | chr3.3:87558807-87558826 | None:intergenic | 35.0% | |
| CGAACACTGTATATAGCATT+TGG | - | chr3.3:87556601-87556620 | None:intergenic | 35.0% | |
| GAAAACAGCTTGAGAAATGT+GGG | + | chr3.3:87561050-87561069 | MS.gene014854:CDS | 35.0% | |
| GAAGGGATTACAAATATCCA+TGG | + | chr3.3:87556888-87556907 | MS.gene014854:CDS | 35.0% | |
| GACTGGAATAGAGTATAATG+TGG | - | chr3.3:87556501-87556520 | None:intergenic | 35.0% | |
| GCTGTCTATGTAGCTTAAAA+AGG | + | chr3.3:87557972-87557991 | MS.gene014854:intron | 35.0% | |
| GTAGTCAGAAATCAGAATCA+CGG | - | chr3.3:87557023-87557042 | None:intergenic | 35.0% | |
| GTTCCTTCTTCAATTCTGTT+TGG | - | chr3.3:87560572-87560591 | None:intergenic | 35.0% | |
| GTTGTGGAACATAAAGAATC+TGG | - | chr3.3:87560028-87560047 | None:intergenic | 35.0% | |
| TACTCAAATGCAATGGGATA+TGG | + | chr3.3:87560184-87560203 | MS.gene014854:CDS | 35.0% | |
| TCAATTCTGTTTGGGAACTA+CGG | - | chr3.3:87560563-87560582 | None:intergenic | 35.0% | |
| TCATTAAAGGACAGTTCTAC+AGG | + | chr3.3:87556841-87556860 | MS.gene014854:intron | 35.0% | |
| TGAAAGAGAAAAGAGTGAAC+AGG | + | chr3.3:87561012-87561031 | MS.gene014854:CDS | 35.0% | |
| TGGATATTTGTAATCCCTTC+TGG | - | chr3.3:87556888-87556907 | None:intergenic | 35.0% | |
| TGTTGGTCAGAATTTGACAA+AGG | + | chr3.3:87560392-87560411 | MS.gene014854:CDS | 35.0% | |
| TTATCATCCTGTCCAATTCT+TGG | - | chr3.3:87559271-87559290 | None:intergenic | 35.0% | |
| TTCCCAAACAGAATTGAAGA+AGG | + | chr3.3:87560566-87560585 | MS.gene014854:CDS | 35.0% | |
| TTCCGCCTCAAAGTTAATAT+TGG | - | chr3.3:87557580-87557599 | None:intergenic | 35.0% | |
| TTGGTATACAATCACCAGAA+GGG | + | chr3.3:87556871-87556890 | MS.gene014854:CDS | 35.0% | |
| TTTCAATGTCCCCAAAAACA+TGG | - | chr3.3:87558550-87558569 | None:intergenic | 35.0% | |
| ! | AAAGCTTTGTATGCAAGTTG+TGG | - | chr3.3:87560044-87560063 | None:intergenic | 35.0% |
| ! | ACAAGATCCACCATGTTTTT+GGG | + | chr3.3:87558537-87558556 | MS.gene014854:intron | 35.0% |
| ! | AGTTTATTGCGTTGATCTAG+CGG | - | chr3.3:87559772-87559791 | None:intergenic | 35.0% |
| ! | ATATACATGAGTTGAATGGG+TGG | + | chr3.3:87558818-87558837 | MS.gene014854:intron | 35.0% |
| ! | ATATCCATGGAGTACTAAGA+AGG | + | chr3.3:87556901-87556920 | MS.gene014854:CDS | 35.0% |
| ! | ATTTTGTACAACGTGACAAG+TGG | + | chr3.3:87558753-87558772 | MS.gene014854:intron | 35.0% |
| ! | CCCTTATCCTTATACCATTT+TGG | + | chr3.3:87557328-87557347 | MS.gene014854:intron | 35.0% |
| ! | GGTAGTGACATGTCTAATTT+TGG | + | chr3.3:87559625-87559644 | MS.gene014854:CDS | 35.0% |
| ! | GTTTCTTTCAGATCTGGTTT+AGG | - | chr3.3:87557558-87557577 | None:intergenic | 35.0% |
| ! | TAATCCGTGTTATTGGAATC+AGG | - | chr3.3:87559139-87559158 | None:intergenic | 35.0% |
| ! | TTATATTTTCTCGCAGCAGA+AGG | - | chr3.3:87557739-87557758 | None:intergenic | 35.0% |
| ! | TTCACATTCTGAGAGAGTAT+CGG | - | chr3.3:87557233-87557252 | None:intergenic | 35.0% |
| ! | TTGTTGCATGTTTGGGATTA+TGG | + | chr3.3:87558105-87558124 | MS.gene014854:intron | 35.0% |
| ! | TTTGGGATTCCAAATTCATC+TGG | + | chr3.3:87559643-87559662 | MS.gene014854:CDS | 35.0% |
| !! | AATGAAAGTGTTGGAAGTGA+TGG | + | chr3.3:87559589-87559608 | MS.gene014854:CDS | 35.0% |
| !! | ACAGAAAAGCTTTGAAAGGA+AGG | - | chr3.3:87560812-87560831 | None:intergenic | 35.0% |
| !! | CAGAAAAGCTTTGAAAGGAA+GGG | - | chr3.3:87560811-87560830 | None:intergenic | 35.0% |
| !! | CAGGATGATAATTCTGAAGT+TGG | + | chr3.3:87559280-87559299 | MS.gene014854:CDS | 35.0% |
| !! | GTTTACTTTTGCTACAGAGA+AGG | + | chr3.3:87558857-87558876 | MS.gene014854:intron | 35.0% |
| AAAGGAGAAATGTGAAGCTG+AGG | + | chr3.3:87560605-87560624 | MS.gene014854:CDS | 40.0% | |
| AAATAAGGAGAACTTGCAGC+AGG | + | chr3.3:87560136-87560155 | MS.gene014854:CDS | 40.0% | |
| AACAGACAAACCGTGTTACA+AGG | + | chr3.3:87561502-87561521 | MS.gene014854:CDS | 40.0% | |
| AAGCTACATAGACAGCATGT+GGG | - | chr3.3:87557968-87557987 | None:intergenic | 40.0% | |
| AAGGTATACCATATGCGACT+TGG | + | chr3.3:87559904-87559923 | MS.gene014854:intron | 40.0% | |
| AATTGACATCCTACTAGCAG+AGG | + | chr3.3:87561195-87561214 | MS.gene014854:CDS | 40.0% | |
| ACATGTGCACAACAACATGA+GGG | + | chr3.3:87557668-87557687 | MS.gene014854:intron | 40.0% | |
| ACTACTAGAAGCAGATTGAC+TGG | - | chr3.3:87556518-87556537 | None:intergenic | 40.0% | |
| AGAGCTAGAAGCAAAATCCA+AGG | + | chr3.3:87560500-87560519 | MS.gene014854:CDS | 40.0% | |
| AGCAATTAGAAGGACTTCCT+AGG | + | chr3.3:87559413-87559432 | MS.gene014854:CDS | 40.0% | |
| AGCCTTTCAGTAACTTTCTC+TGG | + | chr3.3:87558486-87558505 | MS.gene014854:intron | 40.0% | |
| AGTTCAGAAATAAGGCAGTG+AGG | - | chr3.3:87560908-87560927 | None:intergenic | 40.0% | |
| ATCTGTTCAGGTCAAGGATT+TGG | + | chr3.3:87560085-87560104 | MS.gene014854:intron | 40.0% | |
| CACCGAATAATCCGTGTTAT+TGG | - | chr3.3:87559146-87559165 | None:intergenic | 40.0% | |
| CACTGCAAAAACTGATATGG+AGG | + | chr3.3:87559828-87559847 | MS.gene014854:CDS | 40.0% | |
| CGATCCTGATTCCAATAACA+CGG | + | chr3.3:87559132-87559151 | MS.gene014854:CDS | 40.0% | |
| CGTAACATTGTTCACATGTC+TGG | - | chr3.3:87559452-87559471 | None:intergenic | 40.0% | |
| CTGCTAGTAGGATGTCAATT+TGG | - | chr3.3:87561195-87561214 | None:intergenic | 40.0% | |
| CTGGCATTTACTTTATGCCT+AGG | - | chr3.3:87559433-87559452 | None:intergenic | 40.0% | |
| GAAGTAGGAACTCCAAGAAT+TGG | + | chr3.3:87559256-87559275 | MS.gene014854:CDS | 40.0% | |
| GACATGTGAACAATGTTACG+GGG | + | chr3.3:87559452-87559471 | MS.gene014854:CDS | 40.0% | |
| GAGCTAGAAGCAAAATCCAA+GGG | + | chr3.3:87560501-87560520 | MS.gene014854:CDS | 40.0% | |
| GATCGTTTACTGAATTCTGC+TGG | - | chr3.3:87559117-87559136 | None:intergenic | 40.0% | |
| GCATATGTCTGTGCTTGTTT+AGG | + | chr3.3:87557918-87557937 | MS.gene014854:intron | 40.0% | |
| GGAACTTAGTGAGTCCATAA+AGG | + | chr3.3:87560587-87560606 | MS.gene014854:CDS | 40.0% | |
| GTAAAGTCAAGTGTCAAACC+AGG | + | chr3.3:87556670-87556689 | MS.gene014854:intron | 40.0% | |
| GTAACCAATTCCATCTTGAC+TGG | - | chr3.3:87558315-87558334 | None:intergenic | 40.0% | |
| GTTGGTATACAATCACCAGA+AGG | + | chr3.3:87556870-87556889 | MS.gene014854:CDS | 40.0% | |
| TAAGCTACATAGACAGCATG+TGG | - | chr3.3:87557969-87557988 | None:intergenic | 40.0% | |
| TACAAGGCATGCTCTCAAAT+TGG | + | chr3.3:87561518-87561537 | MS.gene014854:CDS | 40.0% | |
| TACATTAGAAGCTGCACTTC+CGG | - | chr3.3:87561388-87561407 | None:intergenic | 40.0% | |
| TATATCAAGATGTGCATCGG+TGG | + | chr3.3:87558924-87558943 | MS.gene014854:CDS | 40.0% | |
| TCAAATGCAATGGGATATGG+AGG | + | chr3.3:87560187-87560206 | MS.gene014854:CDS | 40.0% | |
| TCAGGTAGAAAACCTAGAGA+AGG | + | chr3.3:87561359-87561378 | MS.gene014854:intron | 40.0% | |
| TCATCTGTTGCGTCAGATTA+TGG | + | chr3.3:87559208-87559227 | MS.gene014854:CDS | 40.0% | |
| TGAACCTTCTTAGTACTCCA+TGG | - | chr3.3:87556908-87556927 | None:intergenic | 40.0% | |
| TGATACCAGGATGGAAATGT+TGG | + | chr3.3:87560375-87560394 | MS.gene014854:intron | 40.0% | |
| TGATACTCCATACGATGCAT+CGG | + | chr3.3:87559234-87559253 | MS.gene014854:CDS | 40.0% | |
| TGATCTTCCTTACGAAGATG+AGG | + | chr3.3:87561105-87561124 | MS.gene014854:CDS | 40.0% | |
| TGTTGTGCACATGTGTTATG+AGG | - | chr3.3:87557662-87557681 | None:intergenic | 40.0% | |
| ! | ACATGCAGATTAGCCAAAGA+AGG | - | chr3.3:87557396-87557415 | None:intergenic | 40.0% |
| ! | ATTGAAAAGCCGAGCTTTGT+TGG | + | chr3.3:87558044-87558063 | MS.gene014854:CDS | 40.0% |
| ! | CAAATCATGGTGGAGTCAAT+TGG | + | chr3.3:87557255-87557274 | MS.gene014854:intron | 40.0% |
| ! | CACAAGATCCACCATGTTTT+TGG | + | chr3.3:87558536-87558555 | MS.gene014854:intron | 40.0% |
| ! | GTAAAAGCACAAGCACAAGA+AGG | - | chr3.3:87558386-87558405 | None:intergenic | 40.0% |
| ! | TAACTTGTACCTCTGCTAGT+AGG | - | chr3.3:87561207-87561226 | None:intergenic | 40.0% |
| ! | TTTGAGGCGGAAAATAGACA+AGG | + | chr3.3:87557588-87557607 | MS.gene014854:intron | 40.0% |
| ! | TTTTTCACAGACATGTCTCC+TGG | - | chr3.3:87556691-87556710 | None:intergenic | 40.0% |
| !! | CAAAAACATGGTGGATCTTG+TGG | - | chr3.3:87558538-87558557 | None:intergenic | 40.0% |
| !! | CAAGATCCACCATGTTTTTG+GGG | + | chr3.3:87558538-87558557 | MS.gene014854:intron | 40.0% |
| AGAAGTGACTGGATCTGTTC+AGG | + | chr3.3:87560073-87560092 | MS.gene014854:intron | 45.0% | |
| AGCAGGCTATTCTGATTGAG+AGG | + | chr3.3:87560153-87560172 | MS.gene014854:CDS | 45.0% | |
| AGGAACTCCAAGAATTGGAC+AGG | + | chr3.3:87559261-87559280 | MS.gene014854:CDS | 45.0% | |
| ATTCCATCTTGACTGGACAG+CGG | - | chr3.3:87558308-87558327 | None:intergenic | 45.0% | |
| CAACCTCTTCCAACAAAGCT+CGG | - | chr3.3:87558056-87558075 | None:intergenic | 45.0% | |
| CAATGTCCCCAAAAACATGG+TGG | - | chr3.3:87558547-87558566 | None:intergenic | 45.0% | |
| CACATGTGCACAACAACATG+AGG | + | chr3.3:87557667-87557686 | MS.gene014854:intron | 45.0% | |
| CAGCTAATGATAAGCCCGAA+TGG | - | chr3.3:87559180-87559199 | None:intergenic | 45.0% | |
| CAGTTCTACAGGCTTCAAGT+TGG | + | chr3.3:87556852-87556871 | MS.gene014854:CDS | 45.0% | |
| CTGTCCAGTCAAGATGGAAT+TGG | + | chr3.3:87558308-87558327 | MS.gene014854:intron | 45.0% | |
| GAAAACCTAGAGAAGGACAC+CGG | + | chr3.3:87561366-87561385 | MS.gene014854:CDS | 45.0% | |
| GAGAAATGTGAAGCTGAGGT+AGG | + | chr3.3:87560609-87560628 | MS.gene014854:intron | 45.0% | |
| GAGCCATCACCAGATGAATT+TGG | - | chr3.3:87559655-87559674 | None:intergenic | 45.0% | |
| GCAGGCTATTCTGATTGAGA+GGG | + | chr3.3:87560154-87560173 | MS.gene014854:CDS | 45.0% | |
| GGGATATGGAGGAACTTAGA+CGG | + | chr3.3:87560198-87560217 | MS.gene014854:CDS | 45.0% | |
| GGGGACATTGAAAATGTAGC+TGG | + | chr3.3:87558557-87558576 | MS.gene014854:intron | 45.0% | |
| GGTGCAATCATCTCTCCATT+CGG | + | chr3.3:87559162-87559181 | MS.gene014854:CDS | 45.0% | |
| GTGCAATCATCTCTCCATTC+GGG | + | chr3.3:87559163-87559182 | MS.gene014854:CDS | 45.0% | |
| TAGACGGAAGTCACTGGAAA+TGG | + | chr3.3:87560214-87560233 | MS.gene014854:CDS | 45.0% | |
| TCTGACCAACATTTCCATCC+TGG | - | chr3.3:87560383-87560402 | None:intergenic | 45.0% | |
| TGCTGGCATGTGATTACATG+AGG | - | chr3.3:87559080-87559099 | None:intergenic | 45.0% | |
| TGTGAACAATGTTACGGGGA+AGG | + | chr3.3:87559456-87559475 | MS.gene014854:CDS | 45.0% | |
| TTCAATCGCATGAGTCCCTT+GGG | - | chr3.3:87558030-87558049 | None:intergenic | 45.0% | |
| TTCCTTACGAAGATGAGGAC+AGG | + | chr3.3:87561110-87561129 | MS.gene014854:CDS | 45.0% | |
| TTCTTTCGACCATGCAGAGA+AGG | + | chr3.3:87559800-87559819 | MS.gene014854:CDS | 45.0% | |
| TTGTACCTGAAATTGGCCAG+AGG | + | chr3.3:87559965-87559984 | MS.gene014854:intron | 45.0% | |
| TTTCAATCGCATGAGTCCCT+TGG | - | chr3.3:87558031-87558050 | None:intergenic | 45.0% | |
| ! | ACTTTTGTAGCACCGTCTTG+TGG | + | chr3.3:87556464-87556483 | MS.gene014854:CDS | 45.0% |
| ! | AGTGATGGAAGCTCAATACG+AGG | + | chr3.3:87559604-87559623 | MS.gene014854:CDS | 45.0% |
| ! | CCTGGGCATGCTAAAGTTTT+GGG | + | chr3.3:87559547-87559566 | MS.gene014854:CDS | 45.0% |
| ! | CTTTTGTAGCACCGTCTTGT+GGG | + | chr3.3:87556465-87556484 | MS.gene014854:CDS | 45.0% |
| ! | TATTGCGTTGATCTAGCGGA+AGG | - | chr3.3:87559768-87559787 | None:intergenic | 45.0% |
| ! | TGAGAGCATGCCTTGTAACA+CGG | - | chr3.3:87561515-87561534 | None:intergenic | 45.0% |
| ! | TGGCTTGCATCTTGAAATGC+TGG | - | chr3.3:87559097-87559116 | None:intergenic | 45.0% |
| ! | TTTTGTAGCACCGTCTTGTG+GGG | + | chr3.3:87556466-87556485 | MS.gene014854:CDS | 45.0% |
| !! | ACATGGTGGATCTTGTGGTT+AGG | - | chr3.3:87558533-87558552 | None:intergenic | 45.0% |
| !! | GAGCTTTGTTGGAAGAGGTT+GGG | + | chr3.3:87558055-87558074 | MS.gene014854:intron | 45.0% |
| !! | AAATTAACAATAAAATTAAA+TGG | - | chr3.3:87557154-87557173 | None:intergenic | 5.0% |
| AAACCGAAGCAGATCCAGGA+AGG | - | chr3.3:87559684-87559703 | None:intergenic | 50.0% | |
| ACCAAATGGTCGATCCTGCT+GGG | + | chr3.3:87556438-87556457 | MS.gene014854:CDS | 50.0% | |
| ACGGGGAAGGACAGAAGTAA+TGG | + | chr3.3:87559469-87559488 | MS.gene014854:CDS | 50.0% | |
| AGGCTGAGAGAAAAGCTCCA+TGG | - | chr3.3:87559530-87559549 | None:intergenic | 50.0% | |
| AGTAGCCTCTGGCCAATTTC+AGG | - | chr3.3:87559973-87559992 | None:intergenic | 50.0% | |
| CACAACAACATGAGGGAAGC+CGG | + | chr3.3:87557675-87557694 | MS.gene014854:intron | 50.0% | |
| CCATACGATGCATCGGAAGT+AGG | + | chr3.3:87559241-87559260 | MS.gene014854:CDS | 50.0% | |
| CCCAAAACTTTAGCATGCCC+AGG | - | chr3.3:87559550-87559569 | None:intergenic | 50.0% | |
| CCTACTTCCGATGCATCGTA+TGG | - | chr3.3:87559244-87559263 | None:intergenic | 50.0% | |
| CTTGAAACCGAAGCAGATCC+AGG | - | chr3.3:87559688-87559707 | None:intergenic | 50.0% | |
| GACTGGATCTGTTCAGGTCA+AGG | + | chr3.3:87560079-87560098 | MS.gene014854:intron | 50.0% | |
| GCTACAAAAGTGAACCCAGC+AGG | - | chr3.3:87556455-87556474 | None:intergenic | 50.0% | |
| GGAACTTAGACGGAAGTCAC+TGG | + | chr3.3:87560208-87560227 | MS.gene014854:CDS | 50.0% | |
| GTCCTGTCCTCATCTTCGTA+AGG | - | chr3.3:87561115-87561134 | None:intergenic | 50.0% | |
| GTGAACAGGCAGAAACTGCT+TGG | + | chr3.3:87561026-87561045 | MS.gene014854:CDS | 50.0% | |
| TACAGGGCACACATGCACAT+AGG | - | chr3.3:87557875-87557894 | None:intergenic | 50.0% | |
| TACCAAATGGTCGATCCTGC+TGG | + | chr3.3:87556437-87556456 | MS.gene014854:CDS | 50.0% | |
| TCGGGCTTATCATTAGCTGC+TGG | + | chr3.3:87559181-87559200 | MS.gene014854:CDS | 50.0% | |
| TTACTGCTCGACTCTACAGC+TGG | - | chr3.3:87561257-87561276 | None:intergenic | 50.0% | |
| TTCCATCTTGACTGGACAGC+GGG | - | chr3.3:87558307-87558326 | None:intergenic | 50.0% | |
| ! | ATGGAGCTTTTCTCTCAGCC+TGG | + | chr3.3:87559529-87559548 | MS.gene014854:CDS | 50.0% |
| ! | GCCTGGGCATGCTAAAGTTT+TGG | + | chr3.3:87559546-87559565 | MS.gene014854:CDS | 50.0% |
| ! | TGGAGCTTTTCTCTCAGCCT+GGG | + | chr3.3:87559530-87559549 | MS.gene014854:CDS | 50.0% |
| !! | AAGCCGAGCTTTGTTGGAAG+AGG | + | chr3.3:87558050-87558069 | MS.gene014854:CDS | 50.0% |
| !! | AGTGACTAGCCTTCTCTGCA+TGG | - | chr3.3:87559812-87559831 | None:intergenic | 50.0% |
| !! | CGAGCTTTGTTGGAAGAGGT+TGG | + | chr3.3:87558054-87558073 | MS.gene014854:intron | 50.0% |
| AACGCACGCCAAGTCGCATA+TGG | - | chr3.3:87559915-87559934 | None:intergenic | 55.0% | |
| AATCGCATGAGTCCCTTGGG+TGG | - | chr3.3:87558027-87558046 | None:intergenic | 55.0% | |
| ACCCAGCAGGATCGACCATT+TGG | - | chr3.3:87556442-87556461 | None:intergenic | 55.0% | |
| AGATGCTGCTAGAGAGCAGC+TGG | + | chr3.3:87560455-87560474 | MS.gene014854:CDS | 55.0% | |
| CACTTCCGGTGTCCTTCTCT+AGG | - | chr3.3:87561374-87561393 | None:intergenic | 55.0% | |
| CGACCTTCCTGGATCTGCTT+CGG | + | chr3.3:87559678-87559697 | MS.gene014854:CDS | 55.0% | |
| CGTCTCTGTGTGCGTGTATG+TGG | - | chr3.3:87557072-87557091 | None:intergenic | 55.0% | |
| CTCTGTGTGCGTGTATGTGG+AGG | - | chr3.3:87557069-87557088 | None:intergenic | 55.0% | |
| GCTGGAGGGATGTTTCTCCT+TGG | - | chr3.3:87558003-87558022 | None:intergenic | 55.0% | |
| GTGACAAGTGCCCCACAAGA+CGG | - | chr3.3:87556479-87556498 | None:intergenic | 55.0% | |
| ! | GCAGAACGATGTGCTGTTGC+AGG | + | chr3.3:87560428-87560447 | MS.gene014854:CDS | 55.0% |
| !! | ACAGAGAAGGCGCTCTTTGG+AGG | + | chr3.3:87558870-87558889 | MS.gene014854:intron | 55.0% |
| !! | GCTACAGAGAAGGCGCTCTT+TGG | + | chr3.3:87558867-87558886 | MS.gene014854:intron | 55.0% |
| CTCCCGCTGTCCAGTCAAGA+TGG | + | chr3.3:87558302-87558321 | MS.gene014854:intron | 60.0% | |
| ! | GATGGCTCTGTCGACCTTCC+TGG | + | chr3.3:87559667-87559686 | MS.gene014854:CDS | 60.0% |
| !! | GAAGGCGCTCTTTGGAGGAG+TGG | + | chr3.3:87558875-87558894 | MS.gene014854:CDS | 60.0% |
| ATCCCTCCAGCGCCACCCAA+GGG | + | chr3.3:87558012-87558031 | MS.gene014854:CDS | 65.0% | |
| ATGAGTCCCTTGGGTGGCGC+TGG | - | chr3.3:87558021-87558040 | None:intergenic | 65.0% | |
| CATCCCTCCAGCGCCACCCA+AGG | + | chr3.3:87558011-87558030 | MS.gene014854:CDS | 70.0% | |
| ! | AGTCCCTTGGGTGGCGCTGG+AGG | - | chr3.3:87558018-87558037 | None:intergenic | 70.0% |
| ! | GTCCCTTGGGTGGCGCTGGA+GGG | - | chr3.3:87558017-87558036 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 87556430 | 87561593 | 87556430 | ID=MS.gene014854 |
| chr3.3 | mRNA | 87556430 | 87561593 | 87556430 | ID=MS.gene014854.t1;Parent=MS.gene014854 |
| chr3.3 | exon | 87556430 | 87556532 | 87556430 | ID=MS.gene014854.t1.exon1;Parent=MS.gene014854.t1 |
| chr3.3 | CDS | 87556430 | 87556532 | 87556430 | ID=cds.MS.gene014854.t1;Parent=MS.gene014854.t1 |
| chr3.3 | exon | 87556850 | 87556953 | 87556850 | ID=MS.gene014854.t1.exon2;Parent=MS.gene014854.t1 |
| chr3.3 | CDS | 87556850 | 87556953 | 87556850 | ID=cds.MS.gene014854.t1;Parent=MS.gene014854.t1 |
| chr3.3 | exon | 87557985 | 87558071 | 87557985 | ID=MS.gene014854.t1.exon3;Parent=MS.gene014854.t1 |
| chr3.3 | CDS | 87557985 | 87558071 | 87557985 | ID=cds.MS.gene014854.t1;Parent=MS.gene014854.t1 |
| chr3.3 | exon | 87558874 | 87558982 | 87558874 | ID=MS.gene014854.t1.exon4;Parent=MS.gene014854.t1 |
| chr3.3 | CDS | 87558874 | 87558982 | 87558874 | ID=cds.MS.gene014854.t1;Parent=MS.gene014854.t1 |
| chr3.3 | exon | 87559098 | 87559906 | 87559098 | ID=MS.gene014854.t1.exon5;Parent=MS.gene014854.t1 |
| chr3.3 | CDS | 87559098 | 87559906 | 87559098 | ID=cds.MS.gene014854.t1;Parent=MS.gene014854.t1 |
| chr3.3 | exon | 87560095 | 87560259 | 87560095 | ID=MS.gene014854.t1.exon6;Parent=MS.gene014854.t1 |
| chr3.3 | CDS | 87560095 | 87560259 | 87560095 | ID=cds.MS.gene014854.t1;Parent=MS.gene014854.t1 |
| chr3.3 | exon | 87560384 | 87560626 | 87560384 | ID=MS.gene014854.t1.exon7;Parent=MS.gene014854.t1 |
| chr3.3 | CDS | 87560384 | 87560626 | 87560384 | ID=cds.MS.gene014854.t1;Parent=MS.gene014854.t1 |
| chr3.3 | exon | 87560998 | 87561216 | 87560998 | ID=MS.gene014854.t1.exon8;Parent=MS.gene014854.t1 |
| chr3.3 | CDS | 87560998 | 87561216 | 87560998 | ID=cds.MS.gene014854.t1;Parent=MS.gene014854.t1 |
| chr3.3 | exon | 87561363 | 87561593 | 87561363 | ID=MS.gene014854.t1.exon9;Parent=MS.gene014854.t1 |
| chr3.3 | CDS | 87561363 | 87561593 | 87561363 | ID=cds.MS.gene014854.t1;Parent=MS.gene014854.t1 |
| Gene Sequence |
| Protein sequence |
