AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene83547

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene83547.t1 MTR_2g104070 86.544 706 32 6 1 645 1 704 0.0 1143
MS.gene83547.t1 MTR_2g104070 96.120 567 22 0 79 645 1 567 0.0 1056
MS.gene83547.t1 MTR_3g106770 43.840 625 298 9 50 622 78 701 7.56e-150 450
MS.gene83547.t1 MTR_3g106770 43.174 586 276 10 91 622 1 583 1.36e-132 402
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene83547.t1 AT3G15920 45.212 637 289 15 50 645 138 755 2.63e-158 474
MS.gene83547.t1 AT4G32160 41.158 622 314 9 50 623 79 696 2.37e-125 387
MS.gene83547.t1 AT2G25350 36.833 600 302 14 50 606 78 643 3.46e-92 298
MS.gene83547.t1 AT2G25350 38.374 529 274 10 50 535 78 597 1.41e-90 295
MS.gene83547.t1 AT2G25350 39.104 491 247 10 50 497 78 559 2.02e-84 276
MS.gene83547.t1 AT2G25350 39.104 491 247 10 50 497 78 559 2.02e-84 276
MS.gene83547.t1 AT2G25350 39.409 406 194 11 50 412 78 474 2.38e-63 218

Find 110 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATCTGCTGCATCTGTTTC+TGG 0.096087 2.2:-643077 MS.gene83547:CDS
CCGTGGCTAGTCTCTGCTTC+TGG 0.153799 2.2:+642622 None:intergenic
TTGTAGACAATGCCAGTTTA+AGG 0.154348 2.2:-639538 MS.gene83547:CDS
TCATCTTCTTGTTCAGGATA+TGG 0.182716 2.2:+644729 None:intergenic
AATTAAAAGTGAAGCTCTTT+TGG 0.255854 2.2:-643590 MS.gene83547:CDS
GATGTTTCGCATGACCTTCC+TGG 0.294851 2.2:-642729 MS.gene83547:CDS
ATTGACTTGTTTCCTTAAAC+TGG 0.308319 2.2:+639526 None:intergenic
TACTTCACCATCTGATGCTT+TGG 0.326539 2.2:-640237 MS.gene83547:CDS
TAATCATCATCTTCTTGTTC+AGG 0.326755 2.2:+644723 None:intergenic
TACACAAATGCAGTGGGATA+TGG 0.344319 2.2:-641066 MS.gene83547:CDS
TACAAAAGCATCCGTTGTTC+AGG 0.349368 2.2:-640887 MS.gene83547:CDS
AGCTGTGTCAACTTTGCTTC+AGG 0.353816 2.2:-642751 MS.gene83547:CDS
GGACAACTAATGAAGAATTA+AGG 0.355410 2.2:-639580 MS.gene83547:CDS
TATACAACTACAGATGATAC+TGG 0.355565 2.2:-639602 MS.gene83547:CDS
TGTTAGCAACATCAGATAAT+CGG 0.359290 2.2:-640211 MS.gene83547:CDS
TCAGCGACGGCGTTTATTAG+AGG 0.363778 2.2:-643417 MS.gene83547:intron
CATCTTCTTGTTCAGGATAT+GGG 0.371900 2.2:+644730 None:intergenic
CGTGGCTAGTCTCTGCTTCT+GGG 0.375277 2.2:+642623 None:intergenic
ACTATAGCTCTTCGCCTAGA+TGG 0.395183 2.2:-642852 MS.gene83547:CDS
CATAACCATGTGAACCATCT+TGG 0.401669 2.2:+643114 None:intergenic
AGATATGAAGTTGCTAATAA+AGG 0.405971 2.2:-640770 MS.gene83547:CDS
TTACTTGTAGGTCAAAGATT+TGG 0.407476 2.2:-641165 MS.gene83547:intron
CCCTTCTGAGGTTTCTGAGC+TGG 0.417560 2.2:-643045 MS.gene83547:CDS
CCTTCTGAGGTTTCTGAGCT+GGG 0.420819 2.2:-643044 MS.gene83547:CDS
GACAAGGTCACTGAGAATTC+TGG 0.421046 2.2:-642879 MS.gene83547:CDS
GCAACAGCTCAGCGAATTGA+TGG 0.429244 2.2:-640710 MS.gene83547:CDS
CTCATTAGTAAAGTCTTGGC+TGG 0.443866 2.2:+642914 None:intergenic
ACACCTTCTCCTCTTCCTCT+TGG 0.452825 2.2:-644657 MS.gene83547:intron
TGGCGAAGGCAGGTATTTCA+TGG 0.455775 2.2:+643633 None:intergenic
GACGTCTGTTCATCTGAAAT+AGG 0.456411 2.2:+643164 None:intergenic
TGATCAACACTTGTTTCAGT+TGG 0.459583 2.2:+642945 None:intergenic
AGCAAGATTGAATCAAGAAA+TGG 0.460614 2.2:-642574 MS.gene83547:CDS
TTCATCTTCCTCATTCTCCT+CGG 0.464822 2.2:+639478 None:intergenic
ACTTCTCGATACAGAAATAT+CGG 0.467786 2.2:+643373 None:intergenic
CTGAGTTTCCAGAGGATACA+TGG 0.469287 2.2:+642703 None:intergenic
ATAACCATGTGAACCATCTT+GGG 0.473354 2.2:+643115 None:intergenic
ATTGCGGACAACTTAACATC+GGG 0.479149 2.2:-642984 MS.gene83547:CDS
ATGTTTCGCATGACCTTCCT+GGG 0.483805 2.2:-642728 MS.gene83547:CDS
TATCCTCATTAGTAAAGTCT+TGG 0.484477 2.2:+642910 None:intergenic
TTATAATGATTTAGGATGAA+AGG 0.489862 2.2:-640924 MS.gene83547:intron
ATGGGATCAGGCACAGCTCT+TGG 0.494460 2.2:-639663 MS.gene83547:intron
GAGAACTCTTCAGAAGGAAA+AGG 0.505418 2.2:-640384 MS.gene83547:CDS
CCTGGGAGCCATGTATCCTC+TGG 0.509448 2.2:-642711 MS.gene83547:CDS
CATGGTTATGTTAAAGCTCG+TGG 0.512634 2.2:-643101 MS.gene83547:CDS
CGTCGTTTCCGAGTGGATTG+AGG 0.513027 2.2:+644691 None:intergenic
GACGGCGTTTATTAGAGGAT+TGG 0.529635 2.2:-643412 MS.gene83547:CDS
GTTCTAACTGAGAGCTTCTG+AGG 0.530046 2.2:+640737 None:intergenic
TGAAGAATTAAGGAAAATGC+TGG 0.530259 2.2:-639570 MS.gene83547:CDS
TGGTGATGATACCCCTTCTG+AGG 0.536049 2.2:-643057 MS.gene83547:CDS
AGGAGAAGGTGTTTGAGAAA+CGG 0.536313 2.2:+644668 None:intergenic
GTGTGAAGTCGGCTCCATCT+AGG 0.536680 2.2:+642838 None:intergenic
CCAGAGGATACATGGCTCCC+AGG 0.537554 2.2:+642711 None:intergenic
ATTTCAGATGAACAGACGTC+TGG 0.538551 2.2:-643161 MS.gene83547:CDS
AACTTGTGTCGCTCATCCAA+TGG 0.540733 2.2:+642663 None:intergenic
ACTCTTGAAGCCTCTTCTGA+AGG 0.541023 2.2:+640306 None:intergenic
GGTGATAAATCATATGCGTA+TGG 0.541315 2.2:+644783 None:intergenic
AATGAAATTGAAGTTTGAAG+AGG 0.542626 2.2:-641012 MS.gene83547:intron
CTGCAGAGAAAACATGCAGC+AGG 0.543507 2.2:-641114 MS.gene83547:CDS
CAATCCATACCAAGAGGAAG+AGG 0.549149 2.2:+644648 None:intergenic
CAGCCAAGACTTTACTAATG+AGG 0.552795 2.2:-642913 MS.gene83547:CDS
TCAATTTCATTTCTGTCTCG+AGG 0.553699 2.2:+641024 None:intergenic
GCAACATCAGATAATCGGAT+TGG 0.554769 2.2:-640206 MS.gene83547:CDS
ATACCAAGAGGAAGAGGAGA+AGG 0.563232 2.2:+644654 None:intergenic
TCTCAAATCCGAGGAGAATG+AGG 0.568189 2.2:-639486 MS.gene83547:CDS
AGCATTAGCTGGTGTGAAGT+CGG 0.577674 2.2:+642827 None:intergenic
TTCTAACTGAGAGCTTCTGA+GGG 0.594772 2.2:+640738 None:intergenic
TATTCAGAGAACTCTTCAGA+AGG 0.594795 2.2:-640390 MS.gene83547:intron
AGGATACATGGCTCCCAGGA+AGG 0.600732 2.2:+642715 None:intergenic
GGCGAAGGCAGGTATTTCAT+GGG 0.601932 2.2:+643634 None:intergenic
CCCAGCTCAGAAACCTCAGA+AGG 0.602240 2.2:+643044 None:intergenic
CCATCACATAGGACCCAAGA+TGG 0.604538 2.2:-643128 MS.gene83547:CDS
AACAAATCCAAAGCATCAGA+TGG 0.605868 2.2:+640230 None:intergenic
AGACCGTCAACAGAAAACAT+TGG 0.606258 2.2:-642795 MS.gene83547:CDS
GCGCAATATGATTCTAGTGG+TGG 0.606987 2.2:+644364 None:intergenic
AAGACAATATCTTGTGACAA+AGG 0.608890 2.2:-642547 MS.gene83547:intron
GAAACGGCGTCGTTTCCGAG+TGG 0.615050 2.2:+644684 None:intergenic
ACAAATGCAGTGGGATATGG+AGG 0.618627 2.2:-641063 MS.gene83547:CDS
AGTGTGCAATCCTTCAGAAG+AGG 0.619022 2.2:-640316 MS.gene83547:CDS
TAGCTGATATCGTTCATCAA+AGG 0.620616 2.2:+644762 None:intergenic
CCATCTTGGGTCCTATGTGA+TGG 0.625709 2.2:+643128 None:intergenic
AAAGGTTTACACAAATGCAG+TGG 0.626560 2.2:-641073 MS.gene83547:CDS
AAGGTTTACACAAATGCAGT+GGG 0.626811 2.2:-641072 MS.gene83547:CDS
AGTGGGATATGGAGGAACTT+CGG 0.629220 2.2:-641055 MS.gene83547:CDS
CATTTGCTTCTCCTGAACAA+CGG 0.635355 2.2:+640876 None:intergenic
ATACAACTACAGATGATACT+GGG 0.636328 2.2:-639601 MS.gene83547:CDS
CCAGCTCAGAAACCTCAGAA+GGG 0.640075 2.2:+643045 None:intergenic
GTGGTACTACACCATCACAT+AGG 0.640295 2.2:-643139 MS.gene83547:CDS
GATTGGTCTCTTGCTTGCAG+AGG 0.641568 2.2:-640189 MS.gene83547:intron
TATTGCGGACAACTTAACAT+CGG 0.642658 2.2:-642985 MS.gene83547:CDS
TGAAAGTTCTGATCATATTG+CGG 0.642983 2.2:-643000 MS.gene83547:CDS
TCTCCTCGGATTTGAGAGCA+CGG 0.646545 2.2:+639492 None:intergenic
CAGCTCAGAAACCTCAGAAG+GGG 0.649657 2.2:+643046 None:intergenic
TTAGGATGAAAGGTTGCTAG+CGG 0.654903 2.2:-640914 MS.gene83547:intron
CCGCCGTGCTCTCAAATCCG+AGG 0.655129 2.2:-639495 MS.gene83547:CDS
ACAAGATGTAGAAAATGTTG+TGG 0.656733 2.2:-639639 MS.gene83547:CDS
ACAGCTCAGCGAATTGATGG+AGG 0.664421 2.2:-640707 MS.gene83547:CDS
TCAGATGAACAGACGTCTGG+TGG 0.666802 2.2:-643158 MS.gene83547:CDS
GATGATTACCTCAATCCACT+CGG 0.671894 2.2:-644699 MS.gene83547:CDS
AGGACCCAAGATGGTTCACA+TGG 0.679372 2.2:-643119 MS.gene83547:CDS
AATGTTGTGGATGCTGCGGA+AGG 0.680763 2.2:-639626 MS.gene83547:CDS
CCAGAAGCAGAGACTAGCCA+CGG 0.683328 2.2:-642622 MS.gene83547:CDS
TAACAAATCTGAGTTTCCAG+AGG 0.689483 2.2:+642695 None:intergenic
GGGATATGGAGGAACTTCGG+AGG 0.692756 2.2:-641052 MS.gene83547:CDS
TGAGGATAATAGTACAGACA+AGG 0.697385 2.2:-642895 MS.gene83547:CDS
GTTGCAGCAAGAGCTAGATG+TGG 0.705517 2.2:-640854 MS.gene83547:CDS
AGAAAATGTTGTGGATGCTG+CGG 0.718543 2.2:-639630 MS.gene83547:CDS
TCTGCGCAATATGATTCTAG+TGG 0.725528 2.2:+644361 None:intergenic
TTGCGGACAACTTAACATCG+GGG 0.748961 2.2:-642983 MS.gene83547:CDS
CCTCGGATTTGAGAGCACGG+CGG 0.772593 2.2:+639495 None:intergenic
TTTCTGAGCTGGGAACACCG+AGG 0.811651 2.2:-643034 MS.gene83547:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTATTAACAATTATTAAATT+TGG + chr2.2:641999-642018 None:intergenic 10.0%
!! TAATTGTAATGAAAAAAAAA+AGG + chr2.2:639775-639794 None:intergenic 10.0%
!!! TAACAATTTATTATTTTCAT+TGG - chr2.2:644237-644256 MS.gene83547:intron 10.0%
!!! TCAAAATATTTTCATTTTAA+GGG - chr2.2:642555-642574 MS.gene83547:CDS 10.0%
!!! TTCAAAATATTTTCATTTTA+AGG - chr2.2:642554-642573 MS.gene83547:CDS 10.0%
!! GAAAAAAAAATACAAAAACA+AGG + chr2.2:640551-640570 None:intergenic 15.0%
!! GTGAAAAATTATAATGATTT+AGG - chr2.2:643290-643309 MS.gene83547:intron 15.0%
!!! AAATATTATGTTTTACTTGT+AGG - chr2.2:643045-643064 MS.gene83547:CDS 15.0%
!!! ATATTTAAAATATTGTCCAT+AGG - chr2.2:642363-642382 MS.gene83547:intron 15.0%
!!! TATTATCATTATAGTTTTAC+AGG - chr2.2:639801-639820 MS.gene83547:intron 15.0%
!!! TCATTATAATTTTTCACTAT+AGG + chr2.2:643287-643306 None:intergenic 15.0%
!!! TCTCTGTTTTTTTTTTTAAA+TGG - chr2.2:641778-641797 MS.gene83547:intron 15.0%
!!! TTAATTCTCAATATCTTTTT+CGG + chr2.2:640618-640637 None:intergenic 15.0%
!!! TTTTATATCTGCAAATATAT+GGG - chr2.2:644541-644560 MS.gene83547:intron 15.0%
!!! TTTTCTTTTCATTTTTTCAA+AGG - chr2.2:640740-640759 MS.gene83547:CDS 15.0%
!!! TTTTTATATCTGCAAATATA+TGG - chr2.2:644540-644559 MS.gene83547:intron 15.0%
!! AAACAGATACAATCAATTAT+TGG + chr2.2:642844-642863 None:intergenic 20.0%
!! AACAAAAACATGAAGTTAAT+CGG + chr2.2:643801-643820 None:intergenic 20.0%
!! TATAAATGAATTAGAAGAAG+CGG + chr2.2:642908-642927 None:intergenic 20.0%
!! TGAAAATTAACAACTAACAT+TGG + chr2.2:641804-641823 None:intergenic 20.0%
!!! AATCGGATTTTCAAATTTTT+AGG + chr2.2:643784-643803 None:intergenic 20.0%
!!! AGTTCTAAAATAAGTAGAAT+AGG + chr2.2:644188-644207 None:intergenic 20.0%
!!! ATTTTTTTTTCAGCTGAAAA+AGG - chr2.2:640560-640579 MS.gene83547:intron 20.0%
!!! GTATATTAGGTGTTTTAAAA+TGG - chr2.2:642385-642404 MS.gene83547:intron 20.0%
!!! GTTCTAAAATAAGTAGAATA+GGG + chr2.2:644187-644206 None:intergenic 20.0%
!!! TTAGAAAAGTTTTTTGCAAA+TGG + chr2.2:644772-644791 None:intergenic 20.0%
!!! TTATAATGATTTAGGATGAA+AGG - chr2.2:643298-643317 MS.gene83547:intron 20.0%
!!! TTATTTTAGAACTCCTATTT+TGG - chr2.2:644195-644214 MS.gene83547:intron 20.0%
!!! TTCTAAAATAAGTAGAATAG+GGG + chr2.2:644186-644205 None:intergenic 20.0%
!!! TTGAACATATGACAATATTT+TGG + chr2.2:642640-642659 None:intergenic 20.0%
!!! TTTGTGCGAAAAATATTTTT+CGG - chr2.2:644067-644086 MS.gene83547:intron 20.0%
! AAATTTCAGAATCTTGTCAT+AGG + chr2.2:644434-644453 None:intergenic 25.0%
! AACAAGTTTAATCTCAATGA+TGG - chr2.2:642970-642989 MS.gene83547:CDS 25.0%
! AATGAAATTGAAGTTTGAAG+AGG - chr2.2:643210-643229 MS.gene83547:intron 25.0%
! ACACACAATTTAACTCTAAA+GGG - chr2.2:640008-640027 MS.gene83547:intron 25.0%
! ACATTTATCTAAACTAGACT+GGG - chr2.2:643607-643626 MS.gene83547:CDS 25.0%
! ACCATTTCATATTCATAATG+TGG + chr2.2:642707-642726 None:intergenic 25.0%
! ACGTATGTTGAATATCATAA+AGG + chr2.2:640988-641007 None:intergenic 25.0%
! AGATACAATCAATTATTGGA+AGG + chr2.2:642840-642859 None:intergenic 25.0%
! AGATATGAAGTTGCTAATAA+AGG - chr2.2:643452-643471 MS.gene83547:intron 25.0%
! AGGGCTAAATATAGTATTAT+AGG - chr2.2:642574-642593 MS.gene83547:CDS 25.0%
! AGTTAAATTGTGTGTGAATA+AGG + chr2.2:640003-640022 None:intergenic 25.0%
! ATAAAAAACTGTGAGTAAAG+AGG + chr2.2:644527-644546 None:intergenic 25.0%
! ATATTGTCCATAGGTATATT+AGG - chr2.2:642372-642391 MS.gene83547:intron 25.0%
! CAAATTATCATAGATTCATG+CGG + chr2.2:644347-644366 None:intergenic 25.0%
! CAGGTACAAAATTAAATCTA+TGG + chr2.2:641944-641963 None:intergenic 25.0%
! CATTTCATATTCATAATGTG+GGG + chr2.2:642705-642724 None:intergenic 25.0%
! CCATTTCATATTCATAATGT+GGG + chr2.2:642706-642725 None:intergenic 25.0%
! TAAAACACCTAATATACCTA+TGG + chr2.2:642382-642401 None:intergenic 25.0%
! TGAAAAAACTCAAATTTGAC+AGG + chr2.2:644384-644403 None:intergenic 25.0%
! TTAAATCTGCATAAGTTGTA+TGG - chr2.2:641865-641884 MS.gene83547:intron 25.0%
! TTGAAACCAATAAAAGTTAG+AGG + chr2.2:641831-641850 None:intergenic 25.0%
!! AATTAAAAGTGAAGCTCTTT+TGG - chr2.2:640632-640651 MS.gene83547:intron 25.0%
!! ATTATGAAACTGTCATTTAG+TGG - chr2.2:642077-642096 MS.gene83547:intron 25.0%
!! TAACATCTCTTTTCACATTT+TGG - chr2.2:643258-643277 MS.gene83547:intron 25.0%
!! TGTAAATTTTCTTGTTGAAG+AGG - chr2.2:643943-643962 MS.gene83547:intron 25.0%
!! TTGTGCGAAAAATATTTTTC+GGG - chr2.2:644068-644087 MS.gene83547:intron 25.0%
!!! AAGTTTTGTTAAGACTGTTT+AGG - chr2.2:639957-639976 MS.gene83547:intron 25.0%
!!! GGTTTAGATTTTCTGTTTTT+AGG - chr2.2:643755-643774 MS.gene83547:intron 25.0%
!!! TTTGTTATTGACTTTTCCAT+TGG - chr2.2:641543-641562 MS.gene83547:intron 25.0%
AAGAAGCAAAAGATGAAAAG+AGG + chr2.2:640671-640690 None:intergenic 30.0%
AAGACAATATCTTGTGACAA+AGG - chr2.2:641675-641694 MS.gene83547:intron 30.0%
ACAAGATGTAGAAAATGTTG+TGG - chr2.2:644583-644602 MS.gene83547:intron 30.0%
ACTTCTCGATACAGAAATAT+CGG + chr2.2:640852-640871 None:intergenic 30.0%
AGAGTAACACAATTGATGTA+GGG - chr2.2:644301-644320 MS.gene83547:intron 30.0%
AGCAAGATTGAATCAAGAAA+TGG - chr2.2:641648-641667 MS.gene83547:intron 30.0%
ATACAACTACAGATGATACT+GGG - chr2.2:644621-644640 MS.gene83547:intron 30.0%
ATTCTTGATCCTTCTACTAA+AGG - chr2.2:643725-643744 MS.gene83547:intron 30.0%
ATTTATTGAATGCGAACATC+AGG + chr2.2:641963-641982 None:intergenic 30.0%
CACACACAATTTAACTCTAA+AGG - chr2.2:640007-640026 MS.gene83547:intron 30.0%
CAGAGTGTAATATCCAAAAT+AGG + chr2.2:644211-644230 None:intergenic 30.0%
CCCACATTATGAATATGAAA+TGG - chr2.2:642703-642722 MS.gene83547:CDS 30.0%
CCTTCTACTAAAGGAAAAAA+TGG - chr2.2:643734-643753 MS.gene83547:intron 30.0%
GAATCTTGTCATAGGAAAAT+TGG + chr2.2:644426-644445 None:intergenic 30.0%
GACATTTATCTAAACTAGAC+TGG - chr2.2:643606-643625 MS.gene83547:CDS 30.0%
GCATTCAATAAATTACCATC+AGG - chr2.2:641970-641989 MS.gene83547:intron 30.0%
GCTTTAATCTTTACTTTCTC+TGG - chr2.2:644110-644129 MS.gene83547:intron 30.0%
GGACAACTAATGAAGAATTA+AGG - chr2.2:644642-644661 MS.gene83547:intron 30.0%
GTAACATATAAGAACCAGAA+AGG + chr2.2:643565-643584 None:intergenic 30.0%
TAAATTGTGTGTGAATAAGG+TGG + chr2.2:640000-640019 None:intergenic 30.0%
TAATCATCATCTTCTTGTTC+AGG + chr2.2:639502-639521 None:intergenic 30.0%
TATACAACTACAGATGATAC+TGG - chr2.2:644620-644639 MS.gene83547:intron 30.0%
TATCCTCATTAGTAAAGTCT+TGG + chr2.2:641315-641334 None:intergenic 30.0%
TCACCTAGCAATTATCATTT+GGG - chr2.2:644453-644472 MS.gene83547:intron 30.0%
TGAAAAATCATACTTTGCCA+AGG + chr2.2:641898-641917 None:intergenic 30.0%
TGAAGAATTAAGGAAAATGC+TGG - chr2.2:644652-644671 MS.gene83547:intron 30.0%
TGTATCATATAAGACGTGTT+TGG + chr2.2:640396-640415 None:intergenic 30.0%
TGTTAGCAACATCAGATAAT+CGG - chr2.2:644011-644030 MS.gene83547:intron 30.0%
TTACTTGTAGGTCAAAGATT+TGG - chr2.2:643057-643076 MS.gene83547:CDS 30.0%
TTCACCTAGCAATTATCATT+TGG - chr2.2:644452-644471 MS.gene83547:intron 30.0%
TTTGATAAGTTATCTTGGAG+AGG + chr2.2:640261-640280 None:intergenic 30.0%
! CATTTGCCTCTAACTTTTAT+TGG - chr2.2:641822-641841 MS.gene83547:intron 30.0%
! CTTTCATATTTTTCATGCCT+CGG + chr2.2:641208-641227 None:intergenic 30.0%
! TATTAAATTTGGCTTCCTGA+TGG + chr2.2:641988-642007 None:intergenic 30.0%
! TGAAAGTTCTGATCATATTG+CGG - chr2.2:641222-641241 MS.gene83547:intron 30.0%
! TGTGCGAAAAATATTTTTCG+GGG - chr2.2:644069-644088 MS.gene83547:intron 30.0%
! TTGTGTAAACCTTTCCTTTT+CGG + chr2.2:643143-643162 None:intergenic 30.0%
!! ATTGACTTGTTTCCTTAAAC+TGG + chr2.2:644699-644718 None:intergenic 30.0%
!! TAGTTTTACAGGATTCAAGT+TGG - chr2.2:639812-639831 MS.gene83547:intron 30.0%
!!! ATCATGGTATTGGTTCATTT+TGG - chr2.2:642111-642130 MS.gene83547:intron 30.0%
!!! ATTCTCAATATCTTTTTCGG+TGG + chr2.2:640615-640634 None:intergenic 30.0%
!!! CCATTTTTTCCTTTAGTAGA+AGG + chr2.2:643737-643756 None:intergenic 30.0%
!!! GCTGTTTTGATAAGTTATCT+TGG + chr2.2:640266-640285 None:intergenic 30.0%
AAAAACAAGCTGATCCAAAC+AGG - chr2.2:640148-640167 MS.gene83547:intron 35.0%
AAAAAGTAGATGTGGAGGTA+TGG - chr2.2:643538-643557 MS.gene83547:intron 35.0%
AAAACAAGCTGATCCAAACA+GGG - chr2.2:640149-640168 MS.gene83547:intron 35.0%
AAAGGCAGCTTGTAAATTTG+CGG + chr2.2:644149-644168 None:intergenic 35.0%
AAAGGTTTACACAAATGCAG+TGG - chr2.2:643149-643168 MS.gene83547:CDS 35.0%
AACTCAAGAAAAATTGCTGC+TGG + chr2.2:640878-640897 None:intergenic 35.0%
AACTTAAACACGTAGTCAGA+TGG + chr2.2:643651-643670 None:intergenic 35.0%
AAGGTTTACACAAATGCAGT+GGG - chr2.2:643150-643169 MS.gene83547:CDS 35.0%
ATAACCATGTGAACCATCTT+GGG + chr2.2:641110-641129 None:intergenic 35.0%
ATCTGCAAATATATGGGATC+AGG - chr2.2:644547-644566 MS.gene83547:intron 35.0%
CAACCCAAATGATAATTGCT+AGG + chr2.2:644459-644478 None:intergenic 35.0%
CAAGTAATAATGACCCTGTT+TGG + chr2.2:640165-640184 None:intergenic 35.0%
CACAGTATCAATCATGGTAT+TGG - chr2.2:642101-642120 MS.gene83547:intron 35.0%
CAGAGTAACACAATTGATGT+AGG - chr2.2:644300-644319 MS.gene83547:intron 35.0%
CATCTTCTTGTTCAGGATAT+GGG + chr2.2:639495-639514 None:intergenic 35.0%
GATACTGTGAACTTCTTGTA+TGG + chr2.2:642429-642448 None:intergenic 35.0%
GCTGCCTTTACAATCTATAA+CGG - chr2.2:644160-644179 MS.gene83547:intron 35.0%
GGTGATAAATCATATGCGTA+TGG + chr2.2:639442-639461 None:intergenic 35.0%
GTAACTGATGAATGTGTTCA+AGG - chr2.2:642676-642695 MS.gene83547:CDS 35.0%
TAAAGAGGACACCATATAGA+AGG + chr2.2:644512-644531 None:intergenic 35.0%
TAACAAATCTGAGTTTCCAG+AGG + chr2.2:641530-641549 None:intergenic 35.0%
TAGCTGATATCGTTCATCAA+AGG + chr2.2:639463-639482 None:intergenic 35.0%
TATACGCGCTTATGTTGATA+AGG - chr2.2:640336-640355 MS.gene83547:CDS 35.0%
TATTCAGAGAACTCTTCAGA+AGG - chr2.2:643832-643851 MS.gene83547:intron 35.0%
TATTGCGGACAACTTAACAT+CGG - chr2.2:641237-641256 MS.gene83547:intron 35.0%
TCAATTTCATTTCTGTCTCG+AGG + chr2.2:643201-643220 None:intergenic 35.0%
TCATCTTCTTGTTCAGGATA+TGG + chr2.2:639496-639515 None:intergenic 35.0%
TCCAAATACTCATTTGTAGC+AGG - chr2.2:642042-642061 MS.gene83547:intron 35.0%
TCCTGCTACAAATGAGTATT+TGG + chr2.2:642046-642065 None:intergenic 35.0%
TGAGGATAATAGTACAGACA+AGG - chr2.2:641327-641346 MS.gene83547:intron 35.0%
TGATCAACACTTGTTTCAGT+TGG + chr2.2:641280-641299 None:intergenic 35.0%
TTAATACCCTGTAGTCTGTA+TGG - chr2.2:642012-642031 MS.gene83547:intron 35.0%
TTGTAGACAATGCCAGTTTA+AGG - chr2.2:644684-644703 MS.gene83547:CDS 35.0%
TTGTCAAATGCAGAGAAAAC+AGG + chr2.2:642487-642506 None:intergenic 35.0%
TTTCACTAGAACCATGCAAA+AGG - chr2.2:644267-644286 MS.gene83547:intron 35.0%
! AACAAATCCAAAGCATCAGA+TGG + chr2.2:643995-644014 None:intergenic 35.0%
! AGTTGTATGGTGTTTTTCCT+TGG - chr2.2:641878-641897 MS.gene83547:intron 35.0%
! AGTTTAGTTTAGTACCACGA+CGG + chr2.2:639737-639756 None:intergenic 35.0%
! ATACGCGCTTATGTTGATAA+GGG - chr2.2:640337-640356 MS.gene83547:CDS 35.0%
! CATCTCTTTTCACATTTTGG+TGG - chr2.2:643261-643280 MS.gene83547:intron 35.0%
! CTACATCAATTGTGTTACTC+TGG + chr2.2:644302-644321 None:intergenic 35.0%
! CTTCCAATGTTTTCTGTTGA+CGG + chr2.2:641433-641452 None:intergenic 35.0%
! TTCATTTTGCGTCTGAAGAA+AGG - chr2.2:640950-640969 MS.gene83547:intron 35.0%
! TTGTCATATGTTCAAGTTCG+AGG - chr2.2:642645-642664 MS.gene83547:CDS 35.0%
!!! AAAATATTTTTCGGGGCACT+TGG - chr2.2:644076-644095 MS.gene83547:intron 35.0%
!!! CTGTTTTAACCGAAAAGGAA+AGG - chr2.2:643131-643150 MS.gene83547:CDS 35.0%
!!! GTTTTTTTTTCCTTCAGCGA+CGG - chr2.2:640792-640811 MS.gene83547:CDS 35.0%
!!! TGTATCTGTTTTTGCAAGAG+AGG - chr2.2:642853-642872 MS.gene83547:CDS 35.0%
AACAAGAAGCCAAGAAGGAA+TGG + chr2.2:639680-639699 None:intergenic 40.0%
AAGTTCACAGTATCACATGC+GGG - chr2.2:642435-642454 MS.gene83547:intron 40.0%
ACACCATATAGAAGGCTAAG+GGG + chr2.2:644504-644523 None:intergenic 40.0%
ACTAGAACCATGCAAAAGGA+CGG - chr2.2:644271-644290 MS.gene83547:intron 40.0%
AGAAAATGTTGTGGATGCTG+CGG - chr2.2:644592-644611 MS.gene83547:intron 40.0%
AGAAGAAGAAGAAGAAGGAG+AGG + chr2.2:639710-639729 None:intergenic 40.0%
AGACCGTCAACAGAAAACAT+TGG - chr2.2:641427-641446 MS.gene83547:intron 40.0%
AGAGAGAAAGAGAGAGAGAA+AGG + chr2.2:641763-641782 None:intergenic 40.0%
AGTGGTCACAGTATCAATCA+TGG - chr2.2:642095-642114 MS.gene83547:intron 40.0%
ATTGCGGACAACTTAACATC+GGG - chr2.2:641238-641257 MS.gene83547:intron 40.0%
ATTTCAGATGAACAGACGTC+TGG - chr2.2:641061-641080 MS.gene83547:CDS 40.0%
CAGACTTTCGTGGTTCATTA+TGG - chr2.2:642136-642155 MS.gene83547:intron 40.0%
CAGCCAAGACTTTACTAATG+AGG - chr2.2:641309-641328 MS.gene83547:intron 40.0%
CATAACCATGTGAACCATCT+TGG + chr2.2:641111-641130 None:intergenic 40.0%
CATGGTTATGTTAAAGCTCG+TGG - chr2.2:641121-641140 MS.gene83547:CDS 40.0%
CATTTGCTTCTCCTGAACAA+CGG + chr2.2:643349-643368 None:intergenic 40.0%
CTAAGTCAGTGCTCAGTTAA+TGG - chr2.2:642168-642187 MS.gene83547:intron 40.0%
CTCATTAGTAAAGTCTTGGC+TGG + chr2.2:641311-641330 None:intergenic 40.0%
GAAAGTCCAAGAAGAAGAAG+AGG + chr2.2:639650-639669 None:intergenic 40.0%
GAAGTTCACAGTATCACATG+CGG - chr2.2:642434-642453 MS.gene83547:intron 40.0%
GACACCATATAGAAGGCTAA+GGG + chr2.2:644505-644524 None:intergenic 40.0%
GACTGGGAAAGTAATTTGAC+TGG - chr2.2:643623-643642 MS.gene83547:CDS 40.0%
GAGAACTCTTCAGAAGGAAA+AGG - chr2.2:643838-643857 MS.gene83547:intron 40.0%
GATACACCATACAGACTACA+GGG + chr2.2:642021-642040 None:intergenic 40.0%
GATGATTACCTCAATCCACT+CGG - chr2.2:639523-639542 MS.gene83547:CDS 40.0%
GATGGAGGAAAAAGTAGATG+TGG - chr2.2:643530-643549 MS.gene83547:intron 40.0%
GCAACATCAGATAATCGGAT+TGG - chr2.2:644016-644035 MS.gene83547:intron 40.0%
GGATCAGAAGAAGAAGAAGA+AGG + chr2.2:639715-639734 None:intergenic 40.0%
GTTGTTTACAGAACTAGCTC+AGG - chr2.2:642271-642290 MS.gene83547:intron 40.0%
TACACAAATGCAGTGGGATA+TGG - chr2.2:643156-643175 MS.gene83547:CDS 40.0%
TACTTCACCATCTGATGCTT+TGG - chr2.2:643985-644004 MS.gene83547:intron 40.0%
TAGGAAAATTGGAGTGTGTC+TGG + chr2.2:644415-644434 None:intergenic 40.0%
TCTGCGCAATATGATTCTAG+TGG + chr2.2:639864-639883 None:intergenic 40.0%
TGATACACCATACAGACTAC+AGG + chr2.2:642022-642041 None:intergenic 40.0%
TGCGAACTTGTGAAGTTCTT+AGG - chr2.2:642206-642225 MS.gene83547:intron 40.0%
TTAGGATGAAAGGTTGCTAG+CGG - chr2.2:643308-643327 MS.gene83547:intron 40.0%
TTCATCTTCCTCATTCTCCT+CGG + chr2.2:644747-644766 None:intergenic 40.0%
TTCTAACTGAGAGCTTCTGA+GGG + chr2.2:643487-643506 None:intergenic 40.0%
! CATTTTGGATCAGACTTTCG+TGG - chr2.2:642126-642145 MS.gene83547:intron 40.0%
! CTTTTGACATGAGCATTAGC+TGG + chr2.2:641409-641428 None:intergenic 40.0%
! GACGTCTGTTCATCTGAAAT+AGG + chr2.2:641061-641080 None:intergenic 40.0%
! GTTTAGTTTAGTACCACGAC+GGG + chr2.2:639736-639755 None:intergenic 40.0%
! TCATATGTTCAAGTTCGAGG+AGG - chr2.2:642648-642667 MS.gene83547:CDS 40.0%
!! AAGTGAAGCTCTTTTGGAAG+AGG - chr2.2:640638-640657 MS.gene83547:intron 40.0%
!! AGGAGAAGGTGTTTGAGAAA+CGG + chr2.2:639557-639576 None:intergenic 40.0%
!! TACAAAAGCATCCGTTGTTC+AGG - chr2.2:643335-643354 MS.gene83547:CDS 40.0%
!!! ATCTGTTTTTGCAAGAGAGG+AGG - chr2.2:642856-642875 MS.gene83547:CDS 40.0%
!!! CTCAATATCTTTTTCGGTGG+TGG + chr2.2:640612-640631 None:intergenic 40.0%
!!! TCTGTTTTTGCAAGAGAGGA+GGG - chr2.2:642857-642876 MS.gene83547:CDS 40.0%
AAGAAGCCAAGAAGGAATGG+TGG + chr2.2:639677-639696 None:intergenic 45.0%
ACAAATGCAGTGGGATATGG+AGG - chr2.2:643159-643178 MS.gene83547:CDS 45.0%
ACTATAGCTCTTCGCCTAGA+TGG - chr2.2:641370-641389 MS.gene83547:intron 45.0%
ACTCTTGAAGCCTCTTCTGA+AGG + chr2.2:643919-643938 None:intergenic 45.0%
AGCATTAGCTGGTGTGAAGT+CGG + chr2.2:641398-641417 None:intergenic 45.0%
AGCTGTGTCAACTTTGCTTC+AGG - chr2.2:641471-641490 MS.gene83547:intron 45.0%
AGTGGGATATGGAGGAACTT+CGG - chr2.2:643167-643186 MS.gene83547:CDS 45.0%
AGTGTGCAATCCTTCAGAAG+AGG - chr2.2:643906-643925 MS.gene83547:intron 45.0%
ATACCAAGAGGAAGAGGAGA+AGG + chr2.2:639571-639590 None:intergenic 45.0%
ATGTTTCGCATGACCTTCCT+GGG - chr2.2:641494-641513 MS.gene83547:intron 45.0%
CAATCCATACCAAGAGGAAG+AGG + chr2.2:639577-639596 None:intergenic 45.0%
CTAGTGGTGGTAATAGCTTG+AGG + chr2.2:639848-639867 None:intergenic 45.0%
CTCTTCCTCTTGGTATGGAT+TGG - chr2.2:639575-639594 MS.gene83547:CDS 45.0%
CTGAGTTTCCAGAGGATACA+TGG + chr2.2:641522-641541 None:intergenic 45.0%
GAAGAAGAAGGAGAGGATTG+AGG + chr2.2:639703-639722 None:intergenic 45.0%
GACAAGGTCACTGAGAATTC+TGG - chr2.2:641343-641362 MS.gene83547:intron 45.0%
GACGGCGTTTATTAGAGGAT+TGG - chr2.2:640810-640829 MS.gene83547:CDS 45.0%
GATAAGTTTCAGCACGCAAG+AGG + chr2.2:642778-642797 None:intergenic 45.0%
GCGCAATATGATTCTAGTGG+TGG + chr2.2:639861-639880 None:intergenic 45.0%
GCGGGATTCAGCTATACATA+AGG - chr2.2:642453-642472 MS.gene83547:intron 45.0%
GGACACCATATAGAAGGCTA+AGG + chr2.2:644506-644525 None:intergenic 45.0%
GGAGGAAAAAGTAGATGTGG+AGG - chr2.2:643533-643552 MS.gene83547:intron 45.0%
GGGGCCGTTATAGATTGTAA+AGG + chr2.2:644167-644186 None:intergenic 45.0%
GTGGTACTACACCATCACAT+AGG - chr2.2:641083-641102 MS.gene83547:CDS 45.0%
GTTCTAACTGAGAGCTTCTG+AGG + chr2.2:643488-643507 None:intergenic 45.0%
TCATCTGCTGCATCTGTTTC+TGG - chr2.2:641145-641164 MS.gene83547:CDS 45.0%
TCCAAGAAGAAGAAGAGGTG+TGG + chr2.2:639645-639664 None:intergenic 45.0%
TCTCAAATCCGAGGAGAATG+AGG - chr2.2:644736-644755 MS.gene83547:CDS 45.0%
TCTCTTCCACCATTCCTTCT+TGG - chr2.2:639668-639687 MS.gene83547:intron 45.0%
TGAGGAACAAGAAGCCAAGA+AGG + chr2.2:639685-639704 None:intergenic 45.0%
TTCTCCTCTTCCTCTTGGTA+TGG - chr2.2:639570-639589 MS.gene83547:CDS 45.0%
TTGCGGACAACTTAACATCG+GGG - chr2.2:641239-641258 MS.gene83547:intron 45.0%
! AACTTGTGTCGCTCATCCAA+TGG + chr2.2:641562-641581 None:intergenic 45.0%
! ACAGAACTAGCTCAGGCTTT+TGG - chr2.2:642278-642297 MS.gene83547:intron 45.0%
! CAAGAAGAAGAAGAGGTGTG+GGG + chr2.2:639643-639662 None:intergenic 45.0%
! CCAAGAAGAAGAAGAGGTGT+GGG + chr2.2:639644-639663 None:intergenic 45.0%
! GGAAAATCCGTCCTTTTGCA+TGG + chr2.2:644281-644300 None:intergenic 45.0%
! GTTCAAGTTCGAGGAGGAAA+GGG - chr2.2:642654-642673 MS.gene83547:CDS 45.0%
! TGTTCAAGTTCGAGGAGGAA+AGG - chr2.2:642653-642672 MS.gene83547:CDS 45.0%
!! TTCAACATCCGTTTTTGCCG+TGG + chr2.2:641620-641639 None:intergenic 45.0%
!!! GCAGGCTGTTTTAACCGAAA+AGG - chr2.2:643126-643145 MS.gene83547:CDS 45.0%
!!! AGTTTTTTATTTTTTTATTT+AGG - chr2.2:640515-640534 MS.gene83547:intron 5.0%
AATGTTGTGGATGCTGCGGA+AGG - chr2.2:644596-644615 MS.gene83547:intron 50.0%
ACACCTTCTCCTCTTCCTCT+TGG - chr2.2:639565-639584 MS.gene83547:CDS 50.0%
ACAGCTCAGCGAATTGATGG+AGG - chr2.2:643515-643534 MS.gene83547:intron 50.0%
AGGACCCAAGATGGTTCACA+TGG - chr2.2:641103-641122 MS.gene83547:CDS 50.0%
CAGCTCAGAAACCTCAGAAG+GGG + chr2.2:641179-641198 None:intergenic 50.0%
CCAGCTCAGAAACCTCAGAA+GGG + chr2.2:641180-641199 None:intergenic 50.0%
CCATCACATAGGACCCAAGA+TGG - chr2.2:641094-641113 MS.gene83547:CDS 50.0%
CCATCTTGGGTCCTATGTGA+TGG + chr2.2:641097-641116 None:intergenic 50.0%
CCCACACCTCTTCTTCTTCT+TGG - chr2.2:639641-639660 MS.gene83547:CDS 50.0%
CCTCCACCACCTAATTGGAA+CGG - chr2.2:639601-639620 MS.gene83547:CDS 50.0%
CTAATAAACGCCGTCGCTGA+AGG + chr2.2:640805-640824 None:intergenic 50.0%
CTGCAGAGAAAACATGCAGC+AGG - chr2.2:643108-643127 MS.gene83547:CDS 50.0%
GATGTTTCGCATGACCTTCC+TGG - chr2.2:641493-641512 MS.gene83547:intron 50.0%
GCAACAGCTCAGCGAATTGA+TGG - chr2.2:643512-643531 MS.gene83547:intron 50.0%
GGACTCCAATCCATACCAAG+AGG + chr2.2:639583-639602 None:intergenic 50.0%
GGCGAAGGCAGGTATTTCAT+GGG + chr2.2:640591-640610 None:intergenic 50.0%
GGGCAGCAAGCAGTAAAACA+TGG + chr2.2:644484-644503 None:intergenic 50.0%
GTTGCAGCAAGAGCTAGATG+TGG - chr2.2:643368-643387 MS.gene83547:CDS 50.0%
TCAGATGAACAGACGTCTGG+TGG - chr2.2:641064-641083 MS.gene83547:CDS 50.0%
TCAGCGACGGCGTTTATTAG+AGG - chr2.2:640805-640824 MS.gene83547:CDS 50.0%
TCTCCTCGGATTTGAGAGCA+CGG + chr2.2:644733-644752 None:intergenic 50.0%
TGGCGAAGGCAGGTATTTCA+TGG + chr2.2:640592-640611 None:intergenic 50.0%
TTCTTCTTCTGATCCCGTCG+TGG - chr2.2:639720-639739 MS.gene83547:intron 50.0%
! CTGCCCCTTAGCCTTCTATA+TGG - chr2.2:644498-644517 MS.gene83547:intron 50.0%
! GAACTAGCTCAGGCTTTTGG+AGG - chr2.2:642281-642300 MS.gene83547:intron 50.0%
! GAGACTAGCCACGGCAAAAA+CGG - chr2.2:641609-641628 MS.gene83547:intron 50.0%
! TGGTGATGATACCCCTTCTG+AGG - chr2.2:641165-641184 MS.gene83547:intron 50.0%
! TGTGGAGGTATGGTCCTTTC+TGG - chr2.2:643548-643567 MS.gene83547:intron 50.0%
!! CCTTCTGAGGTTTCTGAGCT+GGG - chr2.2:641178-641197 MS.gene83547:intron 50.0%
!! GATTGGTCTCTTGCTTGCAG+AGG - chr2.2:644033-644052 MS.gene83547:intron 50.0%
!!! ATCTTTTTCGGTGGTGGCGA+AGG + chr2.2:640606-640625 None:intergenic 50.0%
AGGATACATGGCTCCCAGGA+AGG + chr2.2:641510-641529 None:intergenic 55.0%
ATGGGATCAGGCACAGCTCT+TGG - chr2.2:644559-644578 MS.gene83547:intron 55.0%
CCCAGCTCAGAAACCTCAGA+AGG + chr2.2:641181-641200 None:intergenic 55.0%
GGACCGTTCCAATTAGGTGG+TGG + chr2.2:639607-639626 None:intergenic 55.0%
GGAGTCCTCCACCACCTAAT+TGG - chr2.2:639596-639615 MS.gene83547:CDS 55.0%
GGGATATGGAGGAACTTCGG+AGG - chr2.2:643170-643189 MS.gene83547:CDS 55.0%
GTGGGACCGTTCCAATTAGG+TGG + chr2.2:639610-639629 None:intergenic 55.0%
TTTCTGAGCTGGGAACACCG+AGG - chr2.2:641188-641207 MS.gene83547:intron 55.0%
! CCAGAAGCAGAGACTAGCCA+CGG - chr2.2:641600-641619 MS.gene83547:intron 55.0%
! CCGTTCCAATTAGGTGGTGG+AGG + chr2.2:639604-639623 None:intergenic 55.0%
! GTGGTGGGACCGTTCCAATT+AGG + chr2.2:639613-639632 None:intergenic 55.0%
! GTGTGAAGTCGGCTCCATCT+AGG + chr2.2:641387-641406 None:intergenic 55.0%
!! CCCTTCTGAGGTTTCTGAGC+TGG - chr2.2:641177-641196 MS.gene83547:intron 55.0%
!! CGTCGTTTCCGAGTGGATTG+AGG + chr2.2:639534-639553 None:intergenic 55.0%
!! CGTGGCTAGTCTCTGCTTCT+GGG + chr2.2:641602-641621 None:intergenic 55.0%
CCAGAGGATACATGGCTCCC+AGG + chr2.2:641514-641533 None:intergenic 60.0%
CCTGGGAGCCATGTATCCTC+TGG - chr2.2:641511-641530 MS.gene83547:intron 60.0%
GAAACGGCGTCGTTTCCGAG+TGG + chr2.2:639541-639560 None:intergenic 60.0%
! CCTCGGATTTGAGAGCACGG+CGG + chr2.2:644730-644749 None:intergenic 60.0%
!! CCGTGGCTAGTCTCTGCTTC+TGG + chr2.2:641603-641622 None:intergenic 60.0%
!! TTTTCGGTGGTGGCGAAGGC+AGG + chr2.2:640602-640621 None:intergenic 60.0%
CCGCCGTGCTCTCAAATCCG+AGG - chr2.2:644727-644746 MS.gene83547:CDS 65.0%
GGAACGGTCCCACCACTCTC+TGG - chr2.2:639617-639636 MS.gene83547:CDS 65.0%
GTGTGGGGCCAGAGAGTGGT+GGG + chr2.2:639628-639647 None:intergenic 65.0%
! AGAGGTGTGGGGCCAGAGAG+TGG + chr2.2:639632-639651 None:intergenic 65.0%
GGTGTGGGGCCAGAGAGTGG+TGG + chr2.2:639629-639648 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 639433 644811 639433 ID=MS.gene83547
chr2.2 mRNA 639433 644811 639433 ID=MS.gene83547.t1;Parent=MS.gene83547
chr2.2 exon 644658 644811 644658 ID=MS.gene83547.t1.exon1;Parent=MS.gene83547.t1
chr2.2 CDS 644658 644811 644658 ID=cds.MS.gene83547.t1;Parent=MS.gene83547.t1
chr2.2 exon 644331 644392 644331 ID=MS.gene83547.t1.exon2;Parent=MS.gene83547.t1
chr2.2 CDS 644331 644392 644331 ID=cds.MS.gene83547.t1;Parent=MS.gene83547.t1
chr2.2 exon 643585 643671 643585 ID=MS.gene83547.t1.exon3;Parent=MS.gene83547.t1
chr2.2 CDS 643585 643671 643585 ID=cds.MS.gene83547.t1;Parent=MS.gene83547.t1
chr2.2 exon 643327 643435 643327 ID=MS.gene83547.t1.exon4;Parent=MS.gene83547.t1
chr2.2 CDS 643327 643435 643327 ID=cds.MS.gene83547.t1;Parent=MS.gene83547.t1
chr2.2 exon 642548 643206 642548 ID=MS.gene83547.t1.exon5;Parent=MS.gene83547.t1
chr2.2 CDS 642548 643206 642548 ID=cds.MS.gene83547.t1;Parent=MS.gene83547.t1
chr2.2 exon 641013 641177 641013 ID=MS.gene83547.t1.exon6;Parent=MS.gene83547.t1
chr2.2 CDS 641013 641177 641013 ID=cds.MS.gene83547.t1;Parent=MS.gene83547.t1
chr2.2 exon 640690 640932 640690 ID=MS.gene83547.t1.exon7;Parent=MS.gene83547.t1
chr2.2 CDS 640690 640932 640690 ID=cds.MS.gene83547.t1;Parent=MS.gene83547.t1
chr2.2 exon 640190 640405 640190 ID=MS.gene83547.t1.exon8;Parent=MS.gene83547.t1
chr2.2 CDS 640190 640405 640190 ID=cds.MS.gene83547.t1;Parent=MS.gene83547.t1
chr2.2 exon 639433 639675 639433 ID=MS.gene83547.t1.exon9;Parent=MS.gene83547.t1
chr2.2 CDS 639433 639675 639433 ID=cds.MS.gene83547.t1;Parent=MS.gene83547.t1
Gene Sequence

>MS.gene83547

ATGCATCCATACGCATATGATTTATCACCTTTGATGAACGATATCAGCTACACTACTTACCCATATCCTGAACAAGAAGATGATGATTACGATGATTACCTCAATCCACTCGGAAACGACGCCGTTTCTCAAACACCTTCTCCTCTTCCTCTTGGTATGGATTGGAGTCCTCCACCACCTAATTGGAACGGTCCCACCACTCTCTGGCCCCACACCTCTTCTTCTTCTTGGACTTTCTCTTCCACCATTCCTTCTTGGCTTCTTGTTCCTCAATCCTCTCCTTCTTCTTCTTCTTCTGATCCCGTCGTGGTACTAAACTAAACTAACTTTTTCATTTTTCCTTTTTTTTTTCATTACAATTAATTTGTTATTATCATTATAGTTTTACAGGATTCAAGTTGGTGTTCGATCTCCTCAAGCTATTACCACCACTAGAATCATATTGCGCAGATTCAGCGATTTTCTTCACTTGTTTTCTCAAGTTAGTCAGTTTCAATTCAAATCTACTATCAATTCACTTGCATAAGTTTTGTTAAGACTGTTTAGGACATTTTATATGTTTTTCCACCTTATTCACACACAATTTAACTCTAAAGGGCTATGTTTTAGCTTATGCAAATAAATAAGTTTATGAATTAACAGCTTATGAAGATACAATTTTTGTAAGATTATATATAAGCGCTTATCACATTAAGTGCTGCTTGTGCTATAAGCTAAAAACAAGCTGATCCAAACAGGGTCATTATTACTTGTGAGACTATTTGAGAGAACTTATGAAAACACTTTATGACACGTTCATAAGCTGTTTGTTGCTTATTTCTATAACCTCTCCAAGATAACTTATCAAAACAGCTTATATAGAAAAAGATTAACTTTATTTTATATTTTGTTATAAAAATAGCTTATACGCGCTTATGTTGATAAGGGCTTATGCTATATGTTACAAGTTTAGTTGTTTATCCAAACACGTCTTATATGATACAATATTAAACTGTTATTTTTTATTTTTTTTTTTTGATAAAATTAAACTGTTATTTTTAGATAGTCATTTTTTTTTTCTCTCATATTTCTTGTTTTGTATAAGTTTTTTATTTTTTTATTTAGGAGTTTATTCACCTTGTTTTTGTATTTTTTTTTCAGCTGAAAAAGGAATTTCCCATGAAATACCTGCCTTCGCCACCACCGAAAAAGATATTGAGAATTAAAAGTGAAGCTCTTTTGGAAGAGGTACATTACCTCTTTTCATCTTTTGCTTCTTGTAGTGATTGTTTTGTGCTTATTTTTTTAGCTTCATCAGTAACTTCTTTTTTTCTTTTCATTTTTTCAAAGGACTAATGAGAAGCTTGAAACTGACAAATTGTTTTTTTTTCCTTCAGCGACGGCGTTTATTAGAGGATTGGATGAAAAAATTGTTATCCGATATTTCTGTATCGAGAAGTGCACCAGCAGCAATTTTTCTTGAGTTAGAAGCTGCTGCTAGAGCATGTATGTTTTCTACATGAACAACAAAACTTTTCTTCATTTTGCGTCTGAAGAAAGGACTAACAACAGTCCTTTATGATATTCAACATACGTTTAATGTCTTTCTGTTTTTGTTATTTTCAGCATTTCACGATACGAATCAGCCTATTTCAGATGAACAGACGTCTGGTGGTACTACACCATCACATAGGACCCAAGATGGTTCACATGGTTATGTTAAAGCTCGTGGTTCATCTGCTGCATCTGTTTCTGGTGATGATACCCCTTCTGAGGTTTCTGAGCTGGGAACACCGAGGCATGAAAAATATGAAAGTTCTGATCATATTGCGGACAACTTAACATCGGGGCGTGACTTAATTCATCCAACTGAAACAAGTGTTGATCATGCTGCATCCAGCCAAGACTTTACTAATGAGGATAATAGTACAGACAAGGTCACTGAGAATTCTGGTGATACTATAGCTCTTCGCCTAGATGGAGCCGACTTCACACCAGCTAATGCTCATGTCAAAAGACCGTCAACAGAAAACATTGGAAGTGACTTAACGTCGAGTTCAGCTGTGTCAACTTTGCTTCAGGATGTTTCGCATGACCTTCCTGGGAGCCATGTATCCTCTGGAAACTCAGATTTGTTATTGACTTTTCCATTGGATGAGCGACACAAGTTGAACAGAATTATTAATACCCAGAAGCAGAGACTAGCCACGGCAAAAACGGATGTTGAAGATCTTGTAGCAAGATTGAATCAAGAAATGGCTGCAAGACAATATCTTGTGACAAAGGTATCAAATATGTGTTTAAGATTTTTAGTTATTTCTAAATTCTGAAATACAAGTTTTCATTTGCCTTTCTCTCTCTCTTTCTCTCTGTTTTTTTTTTTAAATGGCCAATGTTAGTTGTTAATTTTCATTTGCCTCTAACTTTTATTGGTTTCAATAAATGTAGTTAAGTTAAATCTGCATAAGTTGTATGGTGTTTTTCCTTGGCAAAGTATGATTTTTCAGTTCTTTATACATCAAATTAATGCCATAGATTTAATTTTGTACCTGATGTTCGCATTCAATAAATTACCATCAGGAAGCCAAATTTAATAATTGTTAATACCCTGTAGTCTGTATGGTGTATCATCCAAATACTCATTTGTAGCAGGACTGTATATAAAATTATGAAACTGTCATTTAGTGGTCACAGTATCAATCATGGTATTGGTTCATTTTGGATCAGACTTTCGTGGTTCATTATGGATCAAATTTCTAAGTCAGTGCTCAGTTAATGGTAAACAAATGAATAGTGCGAACTTGTGAAGTTCTTAGGTTGCTCTGCTGTTCTTATATTTGAAGTTCATTGAATAAGTTTGTTGTTTACAGAACTAGCTCAGGCTTTTGGAGGATTATGCATGTTATGAGTAGATCAGTTGAAAATTTTGTTATTTGAATATAGAGAATGAGATATTTAAAATATTGTCCATAGGTATATTAGGTGTTTTAAAATGGTTGTTGTTAGCTGTTTTTCCATACAAGAAGTTCACAGTATCACATGCGGGATTCAGCTATACATAAGGCTTCTTATCCTGTTTTCTCTGCATTTGACAAAAATGAAAAAATTTAGTTCTGAAAGATTAAGAACTGAATCTGTAATGTTCAAAATATTTTCATTTTAAGGGCTAAATATAGTATTATAGGTAAATATATGCATTTAGTAAAAAAAATGAGATTGTACAAACCAAAATATTGTCATATGTTCAAGTTCGAGGAGGAAAGGGTAACTGATGAATGTGTTCAAGGATGCCCCACATTATGAATATGAAATGGTTACTCATTAAAATGTTTTTCTGCAATTGTTAGATAATTACTATCAAGTCCTCTTGCGTGCTGAAACTTATCATTTTCAGCGCTGAATTGAGTTTCTGTGTAGATCTTTCACCTTCCAATAATTGATTGTATCTGTTTTTGCAAGAGAGGAGGGTGTTCATTAATAAAAGTATAGTTATCCGCTTCTTCTAATTCATTTATAGATGTTACTAGTTACTGTTCACAGATATGTTCATTATGTCAAAACAAGTTTAATCTCAATGATGGAAAAGTAAAAGAAGTAATGAAATCTTATTGAAATTTATATGTTCACATGTTCAAATATTATGTTTTACTTGTAGGTCAAAGATTTGGAAGTTGAACTTGAAACAACTCAACTGAACTGCAGAGAAAACATGCAGCAGGCTGTTTTAACCGAAAAGGAAAGGTTTACACAAATGCAGTGGGATATGGAGGAACTTCGGAGGAAGTGCCTCGAGACAGAAATGAAATTGAAGTTTGAAGAGGTCTGTTTGTGCTTAATAAGTTCAATTAACATCTCTTTTCACATTTTGGTGGCCTATAGTGAAAAATTATAATGATTTAGGATGAAAGGTTGCTAGCGGAATCTACAAAAGCATCCGTTGTTCAGGAGAAGCAAATGTTGCAGCAAGAGCTAGATGTGGCTAGAGAACAACTTAAGCACTTGCAGAAACATCATGATGAGTTTGAGATGAAATCAAAGACAGATATGAAGTTGCTAATAAAGGAAGTGAAATCCCTCAGAAGCTCTCAGTTAGAACTAAAGCAACAGCTCAGCGAATTGATGGAGGAAAAAGTAGATGTGGAGGTATGGTCCTTTCTGGTTCTTATATGTTACAACTATGAACTAATAATTTTAGACATTTATCTAAACTAGACTGGGAAAGTAATTTGACTGGTTCCATCTGACTACGTGTTTAAGTTATTTCTAGAATCTTATTTACATGTATTTTTTCACACAAATTGATATTTCTTCTTATTCTTGATCCTTCTACTAAAGGAAAAAATGGTTTAGATTTTCTGTTTTTAGGTGTCCTAAAAATTTGAAAATCCGATTAACTTCATGTTTTTGTTTCACTGTAAATTATTCAGAGAACTCTTCAGAAGGAAAAGGAAAGAATACAGCTTTCACATGATGCTAATGCAAAGTTGTTGCATGAGTGTGCAATCCTTCAGAAGAGGCTTCAAGAGTGCAGTGTAAATTTTCTTGTTGAAGAGGAAGATAAACTAAATGTTGATACTTCACCATCTGATGCTTTGGATTTGTTAGCAACATCAGATAATCGGATTGGTCTCTTGCTTGCAGAGGTATGAAGCTTTTTTGTGCGAAAAATATTTTTCGGGGCACTTGGCGTCAGAATTAGCTTTAATCTTTACTTTCTCTGGACACTTTAAATGTCCGCAAATTTACAAGCTGCCTTTACAATCTATAACGGCCCCTATTCTACTTATTTTAGAACTCCTATTTTGGATATTACACTCTGTTCTTTTAACAATTTATTATTTTCATTGGCATCTGTTTTCACTAGAACCATGCAAAAGGACGGATTTTCCAGAGTAACACAATTGATGTAGGGCTTAGATTCAATTTTGTTGTCCGCATGAATCTATGATAATTTGTGTGTTTCATTAGTCCTGTCAAATTTGAGTTTTTTCATTAAAAAGCCAGACACACTCCAATTTTCCTATGACAAGATTCTGAAATTTCACCTAGCAATTATCATTTGGGTTGTACCATGTTTTACTGCTTGCTGCCCCTTAGCCTTCTATATGGTGTCCTCTTTACTCACAGTTTTTTATATCTGCAAATATATGGGATCAGGCACAGCTCTTGGCACAAGATGTAGAAAATGTTGTGGATGCTGCGGAAGGATATACAACTACAGATGATACTGGGACAACTAATGAAGAATTAAGGAAAATGCTGGCTAATATTTTTGTAGACAATGCCAGTTTAAGGAAACAAGTCAATTCTGTTATCCGCCGTGCTCTCAAATCCGAGGAGAATGAGGAAGATGAAATCCATTTGCAAAAAACTTTTCTAAGCAAGTTCTTAGAGAGATAA
Protein sequence

>MS.gene83547.t1

MHPYAYDLSPLMNDISYTTYPYPEQEDDDYDDYLNPLGNDAVSQTPSPLPLAITTTRIILRRFSDFLHLFSQLKKEFPMKYLPSPPPKKILRIKSEALLEERRRLLEDWMKKLLSDISVSRSAPAAIFLELEAAARASFHDTNQPISDEQTSGGTTPSHRTQDGSHGYVKARGSSAASVSGDDTPSEVSELGTPRHEKYESSDHIADNLTSGRDLIHPTETSVDHAASSQDFTNEDNSTDKVTENSGDTIALRLDGADFTPANAHVKRPSTENIGSDLTSSSAVSTLLQDVSHDLPGSHVSSGNSDLLLTFPLDERHKLNRIINTQKQRLATAKTDVEDLVARLNQEMAARQYLVTKVKDLEVELETTQLNCRENMQQAVLTEKERFTQMQWDMEELRRKCLETEMKLKFEEDERLLAESTKASVVQEKQMLQQELDVAREQLKHLQKHHDEFEMKSKTDMKLLIKEVKSLRSSQLELKQQLSELMEEKVDVERTLQKEKERIQLSHDANAKLLHECAILQKRLQECSVNFLVEEEDKLNVDTSPSDALDLLATSDNRIGLLLAEAQLLAQDVENVVDAAEGYTTTDDTGTTNEELRKMLANIFVDNASLRKQVNSVIRRALKSEENEEDEIHLQKTFLSKFLER