Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86422.t1 | XP_003597924.1 | 94.1 | 708 | 38 | 2 | 1 | 708 | 1 | 704 | 0.00E+00 | 1240.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86422.t1 | Q9LSB9 | 44.9 | 702 | 325 | 14 | 48 | 708 | 75 | 755 | 6.6e-136 | 486.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86422.t1 | G7II88 | 94.1 | 708 | 38 | 2 | 1 | 708 | 1 | 704 | 0.0e+00 | 1240.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050226 | MS.gene86422 | 0.811978 | 5.34E-51 | -1.69E-46 |
| MS.gene050227 | MS.gene86422 | 0.819193 | 1.32E-52 | -1.69E-46 |
| MS.gene050228 | MS.gene86422 | 0.818629 | 1.77E-52 | -1.69E-46 |
| MS.gene051198 | MS.gene86422 | 0.807665 | 4.52E-50 | -1.69E-46 |
| MS.gene053085 | MS.gene86422 | 0.832468 | 9.29E-56 | -1.69E-46 |
| MS.gene053565 | MS.gene86422 | 0.838747 | 2.39E-57 | -1.69E-46 |
| MS.gene054291 | MS.gene86422 | -0.805554 | 1.26E-49 | -1.69E-46 |
| MS.gene05434 | MS.gene86422 | 0.809258 | 2.07E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene86422 | 0.801507 | 8.72E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene86422 | 0.805771 | 1.14E-49 | -1.69E-46 |
| MS.gene057200 | MS.gene86422 | 0.807001 | 6.26E-50 | -1.69E-46 |
| MS.gene057869 | MS.gene86422 | 0.800178 | 1.63E-48 | -1.69E-46 |
| MS.gene060480 | MS.gene86422 | 0.805701 | 1.18E-49 | -1.69E-46 |
| MS.gene060634 | MS.gene86422 | -0.800492 | 1.41E-48 | -1.69E-46 |
| MS.gene060918 | MS.gene86422 | 0.84738 | 1.20E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene86422 | MS.gene32654 | PPI |
| MS.gene86422 | MS.gene072873 | PPI |
| MS.gene86422 | MS.gene80237 | PPI |
| MS.gene86422 | MS.gene014854 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86422.t1 | MTR_2g104070 | 94.633 | 708 | 34 | 2 | 1 | 708 | 1 | 704 | 0.0 | 1292 |
| MS.gene86422.t1 | MTR_2g104070 | 95.591 | 567 | 25 | 0 | 142 | 708 | 1 | 567 | 0.0 | 1048 |
| MS.gene86422.t1 | MTR_3g106770 | 45.652 | 690 | 320 | 13 | 48 | 685 | 15 | 701 | 0.0 | 546 |
| MS.gene86422.t1 | MTR_3g106770 | 43.686 | 586 | 273 | 13 | 154 | 685 | 1 | 583 | 1.61e-131 | 401 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86422.t1 | AT3G15920 | 43.389 | 779 | 346 | 20 | 1 | 708 | 1 | 755 | 0.0 | 561 |
| MS.gene86422.t1 | AT4G32160 | 43.251 | 689 | 337 | 11 | 48 | 688 | 16 | 698 | 6.64e-164 | 489 |
| MS.gene86422.t1 | AT2G25350 | 39.248 | 665 | 325 | 14 | 48 | 669 | 15 | 643 | 9.20e-132 | 404 |
| MS.gene86422.t1 | AT2G25350 | 40.909 | 594 | 297 | 10 | 48 | 598 | 15 | 597 | 5.83e-130 | 400 |
| MS.gene86422.t1 | AT2G25350 | 41.727 | 556 | 270 | 10 | 48 | 560 | 15 | 559 | 1.46e-123 | 380 |
| MS.gene86422.t1 | AT2G25350 | 41.727 | 556 | 270 | 10 | 48 | 560 | 15 | 559 | 1.46e-123 | 380 |
| MS.gene86422.t1 | AT2G25350 | 42.004 | 469 | 222 | 8 | 48 | 475 | 15 | 474 | 1.84e-100 | 317 |
Find 138 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCTGCTGCATCTGTTTC+TGG | 0.096087 | 2.3:+903296 | MS.gene86422:CDS |
| CCCACACCTCTTCTTCTTCT+TGG | 0.129132 | 2.3:+901799 | MS.gene86422:CDS |
| CCGTGGCTAGTCTCTGCTTC+TGG | 0.153799 | 2.3:-903751 | None:intergenic |
| TCTCTTCCACCATTCCTTCT+TGG | 0.181294 | 2.3:+901826 | MS.gene86422:CDS |
| TTGTGGACAATGCCAGTTTA+AGG | 0.185325 | 2.3:+906835 | MS.gene86422:CDS |
| TCGTCATCTTGTTCAGGATA+TGG | 0.246621 | 2.3:-901648 | None:intergenic |
| AATTAAAAGTGAAGCTCTTT+TGG | 0.255854 | 2.3:+902783 | MS.gene86422:CDS |
| GGAGTCCACCACCACCTAAT+TGG | 0.288197 | 2.3:+901754 | MS.gene86422:CDS |
| GATGTTTCGCATGACCTTCC+TGG | 0.294851 | 2.3:+903644 | MS.gene86422:CDS |
| ATTGACTTGTTTCCTTAAAC+TGG | 0.308319 | 2.3:-906847 | None:intergenic |
| TACTTCACCATCTGATGCTT+TGG | 0.326539 | 2.3:+906136 | MS.gene86422:CDS |
| CTCTTCCTCTTGGTATGGAT+TGG | 0.330203 | 2.3:+901733 | MS.gene86422:CDS |
| TACACAAATGCAGTGGGATA+TGG | 0.344319 | 2.3:+905307 | MS.gene86422:CDS |
| TACAAAAGCATCCGTTGTTC+AGG | 0.349368 | 2.3:+905486 | MS.gene86422:CDS |
| GGACAACTAATGAAGAATTA+AGG | 0.355410 | 2.3:+906793 | MS.gene86422:CDS |
| TATACAACTACAGATGATAC+TGG | 0.355565 | 2.3:+906771 | MS.gene86422:CDS |
| AGCTGTGTCAACTTGGCTTC+AGG | 0.356264 | 2.3:+903622 | MS.gene86422:CDS |
| TGTTAGCAACATCAGATAAT+CGG | 0.359290 | 2.3:+906162 | MS.gene86422:CDS |
| TTCTCCTCTTCCTCTTGGTA+TGG | 0.359729 | 2.3:+901728 | MS.gene86422:CDS |
| TCAGCGACGGCGTTTATTAG+AGG | 0.363778 | 2.3:+902956 | MS.gene86422:intron |
| GACAAGGTCGCTGAGAATTC+TGG | 0.365114 | 2.3:+903494 | MS.gene86422:CDS |
| CGTGGCTAGTCTCTGCTTCT+GGG | 0.375277 | 2.3:-903750 | None:intergenic |
| TCTTCATCGTCATCTTGTTC+AGG | 0.377250 | 2.3:-901654 | None:intergenic |
| ATTGCGGACAACTTAACATT+GGG | 0.390051 | 2.3:+903389 | MS.gene86422:CDS |
| ACTATAGCTCTTCGCCTAGA+TGG | 0.395183 | 2.3:+903521 | MS.gene86422:CDS |
| CTCTTTAGTAAAGTCTTGGC+TGG | 0.398151 | 2.3:-903459 | None:intergenic |
| AGATATGAAGTTGCTAATAA+AGG | 0.405971 | 2.3:+905603 | MS.gene86422:CDS |
| TTACTTGTAGGTCAAAGATT+TGG | 0.407476 | 2.3:+905208 | MS.gene86422:intron |
| CCCTTCTGAGGTTTCTGAGC+TGG | 0.417560 | 2.3:+903328 | MS.gene86422:CDS |
| CCTTCTGAGGTTTCTGAGCT+GGG | 0.420819 | 2.3:+903329 | MS.gene86422:CDS |
| GCAACAGCTCAGCGAATTGA+TGG | 0.429244 | 2.3:+905663 | MS.gene86422:CDS |
| CAAGATGGTTCACATGGTTA+TGG | 0.432579 | 2.3:+903260 | MS.gene86422:CDS |
| CATAACCATGTGAACCATCT+TGG | 0.440292 | 2.3:-903259 | None:intergenic |
| ACACCTTCTCCTCTTCCTCT+TGG | 0.452825 | 2.3:+901723 | MS.gene86422:CDS |
| GTGGTGGGACCGTTCCAATT+AGG | 0.455501 | 2.3:-901768 | None:intergenic |
| TGGCGAAGGCAGGTATTTCA+TGG | 0.455775 | 2.3:-902740 | None:intergenic |
| GACGTCTGTTCATCTGAAAT+AGG | 0.456411 | 2.3:-903209 | None:intergenic |
| GGAACGGTCCCACCACTCTC+TGG | 0.457143 | 2.3:+901775 | MS.gene86422:CDS |
| TATCCTCTTTAGTAAAGTCT+TGG | 0.458255 | 2.3:-903463 | None:intergenic |
| TGATCAACACTTGTTTCAGT+TGG | 0.459583 | 2.3:-903428 | None:intergenic |
| AGCAAGATTGAATCAAGAAA+TGG | 0.460614 | 2.3:+903799 | MS.gene86422:CDS |
| TTCATCTTCCTCATTCTCCT+CGG | 0.464822 | 2.3:-906895 | None:intergenic |
| ACTTCTCGATACAGAAATAT+CGG | 0.467786 | 2.3:-903000 | None:intergenic |
| CGAGTTCAGCTGTGTCAACT+TGG | 0.478512 | 2.3:+903615 | MS.gene86422:CDS |
| ATGTTTCGCATGACCTTCCT+GGG | 0.483805 | 2.3:+903645 | MS.gene86422:CDS |
| TTATAATGATTTAGGATGAA+AGG | 0.489862 | 2.3:+905449 | MS.gene86422:intron |
| ATGGGATCAGGCACAGCTCT+TGG | 0.494460 | 2.3:+906710 | MS.gene86422:intron |
| GAAAGTCCAAGAAGAAGAAG+AGG | 0.496170 | 2.3:-901805 | None:intergenic |
| GAGAACTCTTCAGAAGGAAA+AGG | 0.505418 | 2.3:+905989 | MS.gene86422:intron |
| GTGTGGGGCCAGAGAGTGGT+GGG | 0.508183 | 2.3:-901783 | None:intergenic |
| CAGCCAAGACTTTACTAAAG+AGG | 0.509116 | 2.3:+903460 | MS.gene86422:CDS |
| CCTGGGAGCCGTGTATCCGC+TGG | 0.518665 | 2.3:+903662 | MS.gene86422:CDS |
| CCGTTCCAATTAGGTGGTGG+TGG | 0.524336 | 2.3:-901759 | None:intergenic |
| GACGGCGTTTATTAGAGGAT+TGG | 0.529635 | 2.3:+902961 | MS.gene86422:CDS |
| GTTCTAACTGAGAGCTTCTG+AGG | 0.530046 | 2.3:-905636 | None:intergenic |
| TGAAGAATTAAGGAAAATGC+TGG | 0.530259 | 2.3:+906803 | MS.gene86422:CDS |
| CCAAGAAGAAGAAGAGGTGT+GGG | 0.534848 | 2.3:-901799 | None:intergenic |
| TGGTGATGATACCCCTTCTG+AGG | 0.536049 | 2.3:+903316 | MS.gene86422:CDS |
| AGGAGAAGGTGTTTGAGAAA+CGG | 0.536313 | 2.3:-901712 | None:intergenic |
| GTGTGAAGTCGGCTCCATCT+AGG | 0.536680 | 2.3:-903535 | None:intergenic |
| TATTGCGGACAACTTAACAT+TGG | 0.538120 | 2.3:+903388 | MS.gene86422:CDS |
| ATTTCAGATGAACAGACGTC+TGG | 0.538551 | 2.3:+903212 | MS.gene86422:CDS |
| AACTTGTGTCGCTCATCCAA+TGG | 0.540733 | 2.3:-903710 | None:intergenic |
| ACTCTTGAAGCCTCTTCTGA+AGG | 0.541023 | 2.3:-906067 | None:intergenic |
| GGTGATAAATCATATGCGTA+TGG | 0.541315 | 2.3:-901594 | None:intergenic |
| AATGAAATTGAAGTTTGAAG+AGG | 0.542626 | 2.3:+905361 | MS.gene86422:CDS |
| CTGCAGAGAAAACATGCAGC+AGG | 0.543507 | 2.3:+905259 | MS.gene86422:CDS |
| CCAGCGGATACACGGCTCCC+AGG | 0.545284 | 2.3:-903662 | None:intergenic |
| CTGAGTTTCCAGCGGATACA+CGG | 0.545526 | 2.3:-903670 | None:intergenic |
| GAAGAAGAAGGAGAGGATTG+AGG | 0.546925 | 2.3:-901858 | None:intergenic |
| GGTGTGGGGCCAGAGAGTGG+TGG | 0.547475 | 2.3:-901784 | None:intergenic |
| CAATCCATACCAAGAGGAAG+AGG | 0.549149 | 2.3:-901732 | None:intergenic |
| TGAGGAACAAGAAGCCAAGA+AGG | 0.551912 | 2.3:-901840 | None:intergenic |
| TCAATTTCATTTCTGTCTCG+AGG | 0.553699 | 2.3:-905349 | None:intergenic |
| GCAACATCAGATAATCGGAT+TGG | 0.554769 | 2.3:+906167 | MS.gene86422:CDS |
| AACAAGAAGCCAAGAAGGAA+TGG | 0.560175 | 2.3:-901835 | None:intergenic |
| ATACCAAGAGGAAGAGGAGA+AGG | 0.563232 | 2.3:-901726 | None:intergenic |
| AGAGGTGTGGGGCCAGAGAG+TGG | 0.567559 | 2.3:-901787 | None:intergenic |
| TCTCAAATCCGAGGAGAATG+AGG | 0.568189 | 2.3:+906887 | MS.gene86422:CDS |
| CGGATACACGGCTCCCAGGA+AGG | 0.568331 | 2.3:-903658 | None:intergenic |
| AGCATTAGCTGGTGTGAAGT+CGG | 0.577674 | 2.3:-903546 | None:intergenic |
| TCCAAGAAGAAGAAGAGGTG+TGG | 0.581193 | 2.3:-901800 | None:intergenic |
| TTCTAACTGAGAGCTTCTGA+GGG | 0.594772 | 2.3:-905635 | None:intergenic |
| TATTCAGAGAACTCTTCAGA+AGG | 0.594795 | 2.3:+905983 | MS.gene86422:intron |
| TTCTTCTTCTGATCCCGTCG+TGG | 0.595093 | 2.3:+901872 | MS.gene86422:CDS |
| GGACCGTTCCAATTAGGTGG+TGG | 0.600954 | 2.3:-901762 | None:intergenic |
| CATGGTTATGGTAAAGCTCG+TGG | 0.600969 | 2.3:+903272 | MS.gene86422:CDS |
| GTTTAGTTTAGTACCACGAC+GGG | 0.601531 | 2.3:-901885 | None:intergenic |
| GGCGAAGGCAGGTATTTCAT+GGG | 0.601932 | 2.3:-902739 | None:intergenic |
| CCCAGCTCAGAAACCTCAGA+AGG | 0.602240 | 2.3:-903329 | None:intergenic |
| AACAAATCCAAAGCATCAGA+TGG | 0.605868 | 2.3:-906143 | None:intergenic |
| AGACCGTCAACAGAAAACAT+TGG | 0.606258 | 2.3:+903578 | MS.gene86422:CDS |
| GCGCAATATGATTCTAGTGG+TGG | 0.606987 | 2.3:-902008 | None:intergenic |
| AAGACAATATCTTGTGACAA+AGG | 0.608890 | 2.3:+903826 | MS.gene86422:CDS |
| GGGATCAGAAGAAGAAGGAG+AGG | 0.608916 | 2.3:-901865 | None:intergenic |
| ACGACGGGATCAGAAGAAGA+AGG | 0.612037 | 2.3:-901870 | None:intergenic |
| GAAACGGCGTCGTTTCCGAG+TGG | 0.615050 | 2.3:-901696 | None:intergenic |
| ACAAATGCAGTGGGATATGG+AGG | 0.618627 | 2.3:+905310 | MS.gene86422:CDS |
| AGTGTGCAATCCTTCAGAAG+AGG | 0.619022 | 2.3:+906057 | MS.gene86422:CDS |
| TAGCTGATATCGTTCATCAA+AGG | 0.620616 | 2.3:-901615 | None:intergenic |
| CCATCACATAGGATCCAAGA+TGG | 0.624299 | 2.3:+903245 | MS.gene86422:CDS |
| GTGGGACCGTTCCAATTAGG+TGG | 0.624328 | 2.3:-901765 | None:intergenic |
| AAAGGTTTACACAAATGCAG+TGG | 0.626560 | 2.3:+905300 | MS.gene86422:CDS |
| AAGGTTTACACAAATGCAGT+GGG | 0.626811 | 2.3:+905301 | MS.gene86422:CDS |
| AGTGGGATATGGAGGAACTT+CGG | 0.629220 | 2.3:+905318 | MS.gene86422:CDS |
| CATTTGCTTCTCCTGAACAA+CGG | 0.635355 | 2.3:-905497 | None:intergenic |
| ATACAACTACAGATGATACT+GGG | 0.636328 | 2.3:+906772 | MS.gene86422:CDS |
| CCAGCTCAGAAACCTCAGAA+GGG | 0.640075 | 2.3:-903328 | None:intergenic |
| GTGGTACTACACCATCACAT+AGG | 0.640295 | 2.3:+903234 | MS.gene86422:CDS |
| GATTGGTCTCTTGCTTGCAG+AGG | 0.641568 | 2.3:+906184 | MS.gene86422:CDS |
| AAGAAGCCAAGAAGGAATGG+TGG | 0.642967 | 2.3:-901832 | None:intergenic |
| TGAAAGTTCTGATCATATTG+CGG | 0.642983 | 2.3:+903373 | MS.gene86422:CDS |
| TCTCCTCGGATTTGAGAGCA+CGG | 0.646545 | 2.3:-906881 | None:intergenic |
| CAGCTCAGAAACCTCAGAAG+GGG | 0.649657 | 2.3:-903327 | None:intergenic |
| AGGATCCAAGATGGTTCACA+TGG | 0.653051 | 2.3:+903254 | MS.gene86422:CDS |
| TTAGGATGAAAGGTTGCTAG+CGG | 0.654903 | 2.3:+905459 | MS.gene86422:intron |
| CCGCCGTGCTCTCAAATCCG+AGG | 0.655129 | 2.3:+906878 | MS.gene86422:CDS |
| CTAGTGGTGGTAATAGCTTG+AGG | 0.656095 | 2.3:-901995 | None:intergenic |
| ACAAGATGTAGAAAATGTTG+TGG | 0.656733 | 2.3:+906734 | MS.gene86422:CDS |
| TATAACTATCTCAATCCACT+CGG | 0.656997 | 2.3:+901681 | MS.gene86422:CDS |
| ACAGCTCAGCGAATTGATGG+AGG | 0.664421 | 2.3:+905666 | MS.gene86422:CDS |
| CCACCACCACCTAATTGGAA+CGG | 0.664784 | 2.3:+901759 | MS.gene86422:CDS |
| TCAGATGAACAGACGTCTGG+TGG | 0.666802 | 2.3:+903215 | MS.gene86422:CDS |
| TTGCGGACAACTTAACATTG+GGG | 0.673252 | 2.3:+903390 | MS.gene86422:CDS |
| AGTTTAGTTTAGTACCACGA+CGG | 0.675186 | 2.3:-901886 | None:intergenic |
| AATGTTGTGGATGCTGCGGA+AGG | 0.680763 | 2.3:+906747 | MS.gene86422:CDS |
| CCAGAAGCAGAGACTAGCCA+CGG | 0.683328 | 2.3:+903751 | MS.gene86422:CDS |
| CAAGAAGAAGAAGAGGTGTG+GGG | 0.688228 | 2.3:-901798 | None:intergenic |
| AGAGGATAATAGTACAGACA+AGG | 0.688327 | 2.3:+903478 | MS.gene86422:CDS |
| GGGATATGGAGGAACTTCGG+AGG | 0.692756 | 2.3:+905321 | MS.gene86422:CDS |
| TAACAAATCTGAGTTTCCAG+CGG | 0.695814 | 2.3:-903678 | None:intergenic |
| CCATCTTGGATCCTATGTGA+TGG | 0.699155 | 2.3:-903245 | None:intergenic |
| GTTGCAGCAAGAGCTAGATG+TGG | 0.705517 | 2.3:+905519 | MS.gene86422:CDS |
| GGACTCCAATCCATACCAAG+AGG | 0.706252 | 2.3:-901738 | None:intergenic |
| AGAAAATGTTGTGGATGCTG+CGG | 0.718543 | 2.3:+906743 | MS.gene86422:CDS |
| TCTGCGCAATATGATTCTAG+TGG | 0.725528 | 2.3:-902011 | None:intergenic |
| CCTCGGATTTGAGAGCACGG+CGG | 0.772593 | 2.3:-906878 | None:intergenic |
| TTTCTGAGCTGGGAACACCG+AGG | 0.811651 | 2.3:+903339 | MS.gene86422:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAATACAAAAACA+AGG | - | chr2.3:902699-902718 | None:intergenic | 10.0% |
| !! | ATTAATTGTAATGAAAAAAA+AGG | - | chr2.3:901927-901946 | None:intergenic | 10.0% |
| !! | GTATTAACAATTATTAAATT+TGG | - | chr2.3:904150-904169 | None:intergenic | 10.0% |
| !!! | ATATTTAAAATATTTTCCAT+AGG | + | chr2.3:904514-904533 | MS.gene86422:intron | 10.0% |
| !!! | TAACAATTTATTATTTTCAT+TGG | + | chr2.3:906388-906407 | MS.gene86422:intron | 10.0% |
| !!! | TCAAAATATTTTCATTTTAA+GGG | + | chr2.3:904706-904725 | MS.gene86422:intron | 10.0% |
| !!! | TTCAAAATATTTTCATTTTA+AGG | + | chr2.3:904705-904724 | MS.gene86422:intron | 10.0% |
| !! | GTGAAAAATTATAATGATTT+AGG | + | chr2.3:905441-905460 | MS.gene86422:intron | 15.0% |
| !! | TGAAAATTAATAACTAACAT+TGG | - | chr2.3:903955-903974 | None:intergenic | 15.0% |
| !!! | AAATATTATGTTTTACTTGT+AGG | + | chr2.3:905196-905215 | MS.gene86422:intron | 15.0% |
| !!! | AATTGGATTTTCAAATTTTT+AGG | - | chr2.3:905935-905954 | None:intergenic | 15.0% |
| !!! | TATTATCATTATAGTTTTAC+AGG | + | chr2.3:901951-901970 | MS.gene86422:intron | 15.0% |
| !!! | TCATTATAATTTTTCACTAT+AGG | - | chr2.3:905438-905457 | None:intergenic | 15.0% |
| !!! | TCTCTGTTTTTTTTTTTAAA+TGG | + | chr2.3:903929-903948 | MS.gene86422:intron | 15.0% |
| !!! | TTAATTCTCAATATCTTTTT+CGG | - | chr2.3:902769-902788 | None:intergenic | 15.0% |
| !!! | TTTGTACGAAAAATATTTTT+CGG | + | chr2.3:906218-906237 | MS.gene86422:intron | 15.0% |
| !!! | TTTTATATCTGCAAATATAT+GGG | + | chr2.3:906692-906711 | MS.gene86422:intron | 15.0% |
| !!! | TTTTCTTTTCATTTTTTCAA+AGG | + | chr2.3:902891-902910 | MS.gene86422:intron | 15.0% |
| !!! | TTTTTATATCTGCAAATATA+TGG | + | chr2.3:906691-906710 | MS.gene86422:intron | 15.0% |
| !! | AAAAAAATACAAAAACAAGG+TGG | - | chr2.3:902696-902715 | None:intergenic | 20.0% |
| !! | AACAAAAACATGAAGTTAAT+TGG | - | chr2.3:905952-905971 | None:intergenic | 20.0% |
| !! | AAGAAGTAATGAAATCTTAT+TGG | + | chr2.3:905152-905171 | MS.gene86422:intron | 20.0% |
| !! | TATAAATGAATTAGAAGAAG+CGG | - | chr2.3:905059-905078 | None:intergenic | 20.0% |
| !!! | AGTTCTAAAATAAGTAGAAT+AGG | - | chr2.3:906339-906358 | None:intergenic | 20.0% |
| !!! | AGTTTTAATCTTTACTTTCT+CGG | + | chr2.3:906260-906279 | MS.gene86422:intron | 20.0% |
| !!! | ATATTTTCCATAGGTATATT+AGG | + | chr2.3:904523-904542 | MS.gene86422:intron | 20.0% |
| !!! | GTATATTAGGTGTTTTAAAA+TGG | + | chr2.3:904536-904555 | MS.gene86422:intron | 20.0% |
| !!! | GTTCTAAAATAAGTAGAATA+GGG | - | chr2.3:906338-906357 | None:intergenic | 20.0% |
| !!! | TTAGAAAAGTTTTTTGCAAA+TGG | - | chr2.3:906923-906942 | None:intergenic | 20.0% |
| !!! | TTATAATGATTTAGGATGAA+AGG | + | chr2.3:905449-905468 | MS.gene86422:intron | 20.0% |
| !!! | TTATTTTAGAACTCCTATTT+TGG | + | chr2.3:906346-906365 | MS.gene86422:intron | 20.0% |
| !!! | TTCTAAAATAAGTAGAATAG+GGG | - | chr2.3:906337-906356 | None:intergenic | 20.0% |
| !!! | TTGAACATATGACAATATTT+TGG | - | chr2.3:904791-904810 | None:intergenic | 20.0% |
| !!! | TTGTACGAAAAATATTTTTC+GGG | + | chr2.3:906219-906238 | MS.gene86422:intron | 20.0% |
| !!! | TTTTTTTTTTCAGCTGAAAA+AGG | + | chr2.3:902711-902730 | MS.gene86422:intron | 20.0% |
| ! | AAACAGATGCAATCAATTAT+TGG | - | chr2.3:904995-905014 | None:intergenic | 25.0% |
| ! | AAATTTCAGAATCTTGTCAT+AGG | - | chr2.3:906585-906604 | None:intergenic | 25.0% |
| ! | AACAAGTTTAATCTCAATGA+TGG | + | chr2.3:905121-905140 | MS.gene86422:intron | 25.0% |
| ! | AATGAAATTGAAGTTTGAAG+AGG | + | chr2.3:905361-905380 | MS.gene86422:CDS | 25.0% |
| ! | ACACACAATTTAACTCTAAA+TGG | + | chr2.3:902165-902184 | MS.gene86422:intron | 25.0% |
| ! | ACGTATGTTGAATATCATAA+AGG | - | chr2.3:903139-903158 | None:intergenic | 25.0% |
| ! | AGATATGAAGTTGCTAATAA+AGG | + | chr2.3:905603-905622 | MS.gene86422:CDS | 25.0% |
| ! | AGTTAAATTGTGTGTGAATA+AGG | - | chr2.3:902160-902179 | None:intergenic | 25.0% |
| ! | ATAAAAAACTGTGAGTAAAG+AGG | - | chr2.3:906678-906697 | None:intergenic | 25.0% |
| ! | CAAATTATCATAGATTCATG+CGG | - | chr2.3:906498-906517 | None:intergenic | 25.0% |
| ! | CAGGTACAAAATTAAATCTA+TGG | - | chr2.3:904095-904114 | None:intergenic | 25.0% |
| ! | TAAAACACCTAATATACCTA+TGG | - | chr2.3:904533-904552 | None:intergenic | 25.0% |
| ! | TAACATATAAGAACCAGAAA+GGG | - | chr2.3:905715-905734 | None:intergenic | 25.0% |
| ! | TATTACTTGTGAGACTATTT+GGG | + | chr2.3:902333-902352 | MS.gene86422:intron | 25.0% |
| ! | TGAAAAAACTCAAATTTGAC+AGG | - | chr2.3:906535-906554 | None:intergenic | 25.0% |
| ! | TGTATCATATAAGACATGTT+TGG | - | chr2.3:902551-902570 | None:intergenic | 25.0% |
| ! | TTAAATCTGCATAAGTTGTA+TGG | + | chr2.3:904016-904035 | MS.gene86422:intron | 25.0% |
| ! | TTATTACTTGTGAGACTATT+TGG | + | chr2.3:902332-902351 | MS.gene86422:intron | 25.0% |
| !! | AATTAAAAGTGAAGCTCTTT+TGG | + | chr2.3:902783-902802 | MS.gene86422:CDS | 25.0% |
| !! | ATTATGAAACTGTCATTTAG+TGG | + | chr2.3:904228-904247 | MS.gene86422:intron | 25.0% |
| !! | TAACATCTCTTTTCACATTT+TGG | + | chr2.3:905409-905428 | MS.gene86422:intron | 25.0% |
| !! | TGTAAATTTTCTTGTTGAAG+AGG | + | chr2.3:906094-906113 | MS.gene86422:CDS | 25.0% |
| !! | TGTACGAAAAATATTTTTCG+GGG | + | chr2.3:906220-906239 | MS.gene86422:intron | 25.0% |
| !!! | AAGTTTTGTTAAGACTGTTT+AGG | + | chr2.3:902114-902133 | MS.gene86422:intron | 25.0% |
| !!! | GGTTTAGATTTTCTGTTTTT+AGG | + | chr2.3:905906-905925 | MS.gene86422:intron | 25.0% |
| !!! | GTTTTAATCTTTACTTTCTC+GGG | + | chr2.3:906261-906280 | MS.gene86422:intron | 25.0% |
| !!! | TTCATTTTAAGGGCTAAATA+TGG | + | chr2.3:904716-904735 | MS.gene86422:intron | 25.0% |
| !!! | TTTGTTATTGACTTTTCCAT+TGG | + | chr2.3:903694-903713 | MS.gene86422:CDS | 25.0% |
| AAGACAATATCTTGTGACAA+AGG | + | chr2.3:903826-903845 | MS.gene86422:CDS | 30.0% | |
| ACAAGATGTAGAAAATGTTG+TGG | + | chr2.3:906734-906753 | MS.gene86422:CDS | 30.0% | |
| ACATTTCTCTAAACTAGACT+GGG | + | chr2.3:905758-905777 | MS.gene86422:intron | 30.0% | |
| ACCATTTCATATCCATAATG+TGG | - | chr2.3:904858-904877 | None:intergenic | 30.0% | |
| ACTTCTCGATACAGAAATAT+CGG | - | chr2.3:903003-903022 | None:intergenic | 30.0% | |
| AGAGTAACACAATTGATGTA+GGG | + | chr2.3:906452-906471 | MS.gene86422:intron | 30.0% | |
| AGATGCAATCAATTATTGGA+AGG | - | chr2.3:904991-905010 | None:intergenic | 30.0% | |
| AGCAAGATTGAATCAAGAAA+TGG | + | chr2.3:903799-903818 | MS.gene86422:CDS | 30.0% | |
| AGGGCTAAATATGGTATTAT+AGG | + | chr2.3:904725-904744 | MS.gene86422:intron | 30.0% | |
| ATACAACTACAGATGATACT+GGG | + | chr2.3:906772-906791 | MS.gene86422:CDS | 30.0% | |
| ATTCTTGATCCTTCTACTAA+AGG | + | chr2.3:905876-905895 | MS.gene86422:intron | 30.0% | |
| ATTTATTGAATGCGAACATC+AGG | - | chr2.3:904114-904133 | None:intergenic | 30.0% | |
| CAGAGTGTAATATCCAAAAT+AGG | - | chr2.3:906362-906381 | None:intergenic | 30.0% | |
| CATTTCATATCCATAATGTG+GGG | - | chr2.3:904856-904875 | None:intergenic | 30.0% | |
| CCATTTCATATCCATAATGT+GGG | - | chr2.3:904857-904876 | None:intergenic | 30.0% | |
| CCTTCTACTAAAGGAAAAAA+TGG | + | chr2.3:905885-905904 | MS.gene86422:intron | 30.0% | |
| CTGAAACCAATAAAAGTTAG+AGG | - | chr2.3:903982-904001 | None:intergenic | 30.0% | |
| GAATCTTGTCATAGGAAAAT+TGG | - | chr2.3:906577-906596 | None:intergenic | 30.0% | |
| GCATTCAATAAATTACCATC+AGG | + | chr2.3:904121-904140 | MS.gene86422:intron | 30.0% | |
| GGACAACTAATGAAGAATTA+AGG | + | chr2.3:906793-906812 | MS.gene86422:CDS | 30.0% | |
| GTAACATATAAGAACCAGAA+AGG | - | chr2.3:905716-905735 | None:intergenic | 30.0% | |
| TAAATTGTGTGTGAATAAGG+TGG | - | chr2.3:902157-902176 | None:intergenic | 30.0% | |
| TACAAATACTCATTTGTAGC+AGG | + | chr2.3:904193-904212 | MS.gene86422:intron | 30.0% | |
| TATAACTATCTCAATCCACT+CGG | + | chr2.3:901681-901700 | MS.gene86422:CDS | 30.0% | |
| TATACAACTACAGATGATAC+TGG | + | chr2.3:906771-906790 | MS.gene86422:CDS | 30.0% | |
| TATCCTCTTTAGTAAAGTCT+TGG | - | chr2.3:903466-903485 | None:intergenic | 30.0% | |
| TCACCTAGCAATTATCATTT+GGG | + | chr2.3:906604-906623 | MS.gene86422:intron | 30.0% | |
| TGAAAAATCATACTTTGCCA+AGG | - | chr2.3:904049-904068 | None:intergenic | 30.0% | |
| TGAAGAATTAAGGAAAATGC+TGG | + | chr2.3:906803-906822 | MS.gene86422:CDS | 30.0% | |
| TGTTAGCAACATCAGATAAT+CGG | + | chr2.3:906162-906181 | MS.gene86422:CDS | 30.0% | |
| TTACTTGTAGGTCAAAGATT+TGG | + | chr2.3:905208-905227 | MS.gene86422:intron | 30.0% | |
| TTCACCTAGCAATTATCATT+TGG | + | chr2.3:906603-906622 | MS.gene86422:intron | 30.0% | |
| TTTGATAAGTTATCTTGGAG+AGG | - | chr2.3:902418-902437 | None:intergenic | 30.0% | |
| ! | CATTTGCCTCTAACTTTTAT+TGG | + | chr2.3:903973-903992 | MS.gene86422:intron | 30.0% |
| ! | CTTTCATATTTTTCATGCCT+CGG | - | chr2.3:903359-903378 | None:intergenic | 30.0% |
| ! | TATTAAATTTGGCTTCCTGA+TGG | - | chr2.3:904139-904158 | None:intergenic | 30.0% |
| ! | TGAAAGTTCTGATCATATTG+CGG | + | chr2.3:903373-903392 | MS.gene86422:CDS | 30.0% |
| ! | TTCATTTTGCATCTGAAGAA+AGG | + | chr2.3:903101-903120 | MS.gene86422:intron | 30.0% |
| ! | TTGTGTAAACCTTTCCTTTT+CGG | - | chr2.3:905294-905313 | None:intergenic | 30.0% |
| !! | AATGCTGGCTAATATTTTTG+TGG | + | chr2.3:906818-906837 | MS.gene86422:CDS | 30.0% |
| !! | ATTGACTTGTTTCCTTAAAC+TGG | - | chr2.3:906850-906869 | None:intergenic | 30.0% |
| !! | TAGTTTTACAGGATTCAAGT+TGG | + | chr2.3:901962-901981 | MS.gene86422:intron | 30.0% |
| !!! | ATCATGGTATTGGTTCATTT+TGG | + | chr2.3:904262-904281 | MS.gene86422:intron | 30.0% |
| !!! | ATTCTCAATATCTTTTTCGG+TGG | - | chr2.3:902766-902785 | None:intergenic | 30.0% |
| !!! | CCATTTTTTCCTTTAGTAGA+AGG | - | chr2.3:905888-905907 | None:intergenic | 30.0% |
| !!! | GCTGTTTTGATAAGTTATCT+TGG | - | chr2.3:902423-902442 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTTCCTTCAGCGA+CGG | + | chr2.3:902943-902962 | MS.gene86422:intron | 30.0% |
| AAAAACAAGCTGATCCAAAC+AGG | + | chr2.3:902305-902324 | MS.gene86422:intron | 35.0% | |
| AAAAAGTAGATGTGGAGGTA+TGG | + | chr2.3:905689-905708 | MS.gene86422:intron | 35.0% | |
| AAAACAAGCTGATCCAAACA+GGG | + | chr2.3:902306-902325 | MS.gene86422:intron | 35.0% | |
| AAAGGCAGCTTGTAAATTTG+CGG | - | chr2.3:906300-906319 | None:intergenic | 35.0% | |
| AAAGGTTTACACAAATGCAG+TGG | + | chr2.3:905300-905319 | MS.gene86422:CDS | 35.0% | |
| AACTCAAGAAAAATTGCTGC+TGG | - | chr2.3:903029-903048 | None:intergenic | 35.0% | |
| AACTTAAACACGTAGTCAGA+TGG | - | chr2.3:905802-905821 | None:intergenic | 35.0% | |
| AAGAAGCAAAAGATGAAGAG+AGG | - | chr2.3:902822-902841 | None:intergenic | 35.0% | |
| AAGGTTTACACAAATGCAGT+GGG | + | chr2.3:905301-905320 | MS.gene86422:CDS | 35.0% | |
| AGAGGATAATAGTACAGACA+AGG | + | chr2.3:903478-903497 | MS.gene86422:CDS | 35.0% | |
| ATCTGCAAATATATGGGATC+AGG | + | chr2.3:906698-906717 | MS.gene86422:intron | 35.0% | |
| ATTGCGGACAACTTAACATT+GGG | + | chr2.3:903389-903408 | MS.gene86422:CDS | 35.0% | |
| CAACCCAAATGATAATTGCT+AGG | - | chr2.3:906610-906629 | None:intergenic | 35.0% | |
| CAAGTAATAATGACCCTGTT+TGG | - | chr2.3:902322-902341 | None:intergenic | 35.0% | |
| CACAGTATCAATCATGGTAT+TGG | + | chr2.3:904252-904271 | MS.gene86422:intron | 35.0% | |
| CAGAGTAACACAATTGATGT+AGG | + | chr2.3:906451-906470 | MS.gene86422:intron | 35.0% | |
| CCCACATTATGGATATGAAA+TGG | + | chr2.3:904854-904873 | MS.gene86422:intron | 35.0% | |
| GACATTTCTCTAAACTAGAC+TGG | + | chr2.3:905757-905776 | MS.gene86422:intron | 35.0% | |
| GATACTGTGAACTTCTTGTA+TGG | - | chr2.3:904580-904599 | None:intergenic | 35.0% | |
| GCTGCCTTTACAATCTATAA+CGG | + | chr2.3:906311-906330 | MS.gene86422:intron | 35.0% | |
| GGTGATAAATCATATGCGTA+TGG | - | chr2.3:901597-901616 | None:intergenic | 35.0% | |
| GTAACTGATGAATGTGTTCA+AGG | + | chr2.3:904827-904846 | MS.gene86422:intron | 35.0% | |
| TAAAGAGGACACCATATAGA+AGG | - | chr2.3:906663-906682 | None:intergenic | 35.0% | |
| TAACAAATCTGAGTTTCCAG+CGG | - | chr2.3:903681-903700 | None:intergenic | 35.0% | |
| TAGCTGATATCGTTCATCAA+AGG | - | chr2.3:901618-901637 | None:intergenic | 35.0% | |
| TATACGCGCTTATGTTGATA+AGG | + | chr2.3:902491-902510 | MS.gene86422:intron | 35.0% | |
| TATTCAGAGAACTCTTCAGA+AGG | + | chr2.3:905983-906002 | MS.gene86422:intron | 35.0% | |
| TATTGCGGACAACTTAACAT+TGG | + | chr2.3:903388-903407 | MS.gene86422:CDS | 35.0% | |
| TCAATTTCATTTCTGTCTCG+AGG | - | chr2.3:905352-905371 | None:intergenic | 35.0% | |
| TGATCAACACTTGTTTCAGT+TGG | - | chr2.3:903431-903450 | None:intergenic | 35.0% | |
| TTAATACCCTGTAGTCTGTA+TGG | + | chr2.3:904163-904182 | MS.gene86422:intron | 35.0% | |
| TTGTCAAATGCAGAGAAAAC+AGG | - | chr2.3:904638-904657 | None:intergenic | 35.0% | |
| TTTCACTAGAACCATGCAAA+AGG | + | chr2.3:906418-906437 | MS.gene86422:intron | 35.0% | |
| ! | AACAAATCCAAAGCATCAGA+TGG | - | chr2.3:906146-906165 | None:intergenic | 35.0% |
| ! | AGTTGTATGGTGTTTTTCCT+TGG | + | chr2.3:904029-904048 | MS.gene86422:intron | 35.0% |
| ! | AGTTTAGTTTAGTACCACGA+CGG | - | chr2.3:901889-901908 | None:intergenic | 35.0% |
| ! | ATACGCGCTTATGTTGATAA+GGG | + | chr2.3:902492-902511 | MS.gene86422:intron | 35.0% |
| ! | CATCTCTTTTCACATTTTGG+TGG | + | chr2.3:905412-905431 | MS.gene86422:intron | 35.0% |
| ! | CTACATCAATTGTGTTACTC+TGG | - | chr2.3:906453-906472 | None:intergenic | 35.0% |
| ! | CTTCCAATGTTTTCTGTTGA+CGG | - | chr2.3:903584-903603 | None:intergenic | 35.0% |
| ! | TTGTCATATGTTCAAGTTCG+AGG | + | chr2.3:904796-904815 | MS.gene86422:intron | 35.0% |
| !!! | AAAATATTTTTCGGGGCACT+TGG | + | chr2.3:906227-906246 | MS.gene86422:intron | 35.0% |
| !!! | CTGTTTTAACCGAAAAGGAA+AGG | + | chr2.3:905282-905301 | MS.gene86422:CDS | 35.0% |
| AACAAGAAGCCAAGAAGGAA+TGG | - | chr2.3:901838-901857 | None:intergenic | 40.0% | |
| AAGTTCACAGTATCACATGC+GGG | + | chr2.3:904586-904605 | MS.gene86422:intron | 40.0% | |
| ACACCATATAGAAGGCTAAG+GGG | - | chr2.3:906655-906674 | None:intergenic | 40.0% | |
| ACTAGAACCATGCAAAAGGA+CGG | + | chr2.3:906422-906441 | MS.gene86422:intron | 40.0% | |
| AGAAAATGTTGTGGATGCTG+CGG | + | chr2.3:906743-906762 | MS.gene86422:CDS | 40.0% | |
| AGACCGTCAACAGAAAACAT+TGG | + | chr2.3:903578-903597 | MS.gene86422:CDS | 40.0% | |
| AGTGGTCACAGTATCAATCA+TGG | + | chr2.3:904246-904265 | MS.gene86422:intron | 40.0% | |
| ATTTCAGATGAACAGACGTC+TGG | + | chr2.3:903212-903231 | MS.gene86422:CDS | 40.0% | |
| CAAGATGGTTCACATGGTTA+TGG | + | chr2.3:903260-903279 | MS.gene86422:CDS | 40.0% | |
| CAGACTTTCGTGGTTCATTA+TGG | + | chr2.3:904287-904306 | MS.gene86422:intron | 40.0% | |
| CAGCCAAGACTTTACTAAAG+AGG | + | chr2.3:903460-903479 | MS.gene86422:CDS | 40.0% | |
| CATAACCATGTGAACCATCT+TGG | - | chr2.3:903262-903281 | None:intergenic | 40.0% | |
| CATTTGCTTCTCCTGAACAA+CGG | - | chr2.3:905500-905519 | None:intergenic | 40.0% | |
| CTAAGTCAGTGCTCAGTTAA+TGG | + | chr2.3:904319-904338 | MS.gene86422:intron | 40.0% | |
| CTCTTTAGTAAAGTCTTGGC+TGG | - | chr2.3:903462-903481 | None:intergenic | 40.0% | |
| GAAAGTCCAAGAAGAAGAAG+AGG | - | chr2.3:901808-901827 | None:intergenic | 40.0% | |
| GAAGTTCACAGTATCACATG+CGG | + | chr2.3:904585-904604 | MS.gene86422:intron | 40.0% | |
| GACACCATATAGAAGGCTAA+GGG | - | chr2.3:906656-906675 | None:intergenic | 40.0% | |
| GACTGGGAAAGTAATTTGAC+TGG | + | chr2.3:905774-905793 | MS.gene86422:intron | 40.0% | |
| GAGAACTCTTCAGAAGGAAA+AGG | + | chr2.3:905989-906008 | MS.gene86422:intron | 40.0% | |
| GATACACCATACAGACTACA+GGG | - | chr2.3:904172-904191 | None:intergenic | 40.0% | |
| GATGGAGGAAAAAGTAGATG+TGG | + | chr2.3:905681-905700 | MS.gene86422:CDS | 40.0% | |
| GCAACATCAGATAATCGGAT+TGG | + | chr2.3:906167-906186 | MS.gene86422:CDS | 40.0% | |
| GTTGTTTACAGAACTAGCTC+AGG | + | chr2.3:904422-904441 | MS.gene86422:intron | 40.0% | |
| TACACAAATGCAGTGGGATA+TGG | + | chr2.3:905307-905326 | MS.gene86422:CDS | 40.0% | |
| TACTTCACCATCTGATGCTT+TGG | + | chr2.3:906136-906155 | MS.gene86422:CDS | 40.0% | |
| TAGGAAAATTGGAGTGTGTC+TGG | - | chr2.3:906566-906585 | None:intergenic | 40.0% | |
| TCGTCATCTTGTTCAGGATA+TGG | - | chr2.3:901651-901670 | None:intergenic | 40.0% | |
| TCTGCGCAATATGATTCTAG+TGG | - | chr2.3:902014-902033 | None:intergenic | 40.0% | |
| TCTTCATCGTCATCTTGTTC+AGG | - | chr2.3:901657-901676 | None:intergenic | 40.0% | |
| TGATACACCATACAGACTAC+AGG | - | chr2.3:904173-904192 | None:intergenic | 40.0% | |
| TGCGAACTTGTGAAGTTCTT+AGG | + | chr2.3:904357-904376 | MS.gene86422:intron | 40.0% | |
| TTAGGATGAAAGGTTGCTAG+CGG | + | chr2.3:905459-905478 | MS.gene86422:intron | 40.0% | |
| TTCATCTTCCTCATTCTCCT+CGG | - | chr2.3:906898-906917 | None:intergenic | 40.0% | |
| TTCTAACTGAGAGCTTCTGA+GGG | - | chr2.3:905638-905657 | None:intergenic | 40.0% | |
| TTGCGGACAACTTAACATTG+GGG | + | chr2.3:903390-903409 | MS.gene86422:CDS | 40.0% | |
| TTGTGGACAATGCCAGTTTA+AGG | + | chr2.3:906835-906854 | MS.gene86422:CDS | 40.0% | |
| ! | CATTTTGGATCAGACTTTCG+TGG | + | chr2.3:904277-904296 | MS.gene86422:intron | 40.0% |
| ! | CTTTTGACATGAGCATTAGC+TGG | - | chr2.3:903560-903579 | None:intergenic | 40.0% |
| ! | GACGTCTGTTCATCTGAAAT+AGG | - | chr2.3:903212-903231 | None:intergenic | 40.0% |
| ! | GTTTAGTTTAGTACCACGAC+GGG | - | chr2.3:901888-901907 | None:intergenic | 40.0% |
| ! | TCATATGTTCAAGTTCGAGG+AGG | + | chr2.3:904799-904818 | MS.gene86422:intron | 40.0% |
| !! | AAGTGAAGCTCTTTTGGAAG+AGG | + | chr2.3:902789-902808 | MS.gene86422:CDS | 40.0% |
| !! | AGGAGAAGGTGTTTGAGAAA+CGG | - | chr2.3:901715-901734 | None:intergenic | 40.0% |
| !! | TACAAAAGCATCCGTTGTTC+AGG | + | chr2.3:905486-905505 | MS.gene86422:CDS | 40.0% |
| !!! | ATCTGTTTTTGCAAGAGAGG+AGG | + | chr2.3:905007-905026 | MS.gene86422:intron | 40.0% |
| !!! | CTCAATATCTTTTTCGGTGG+TGG | - | chr2.3:902763-902782 | None:intergenic | 40.0% |
| !!! | TCTGTTTTTGCAAGAGAGGA+GGG | + | chr2.3:905008-905027 | MS.gene86422:intron | 40.0% |
| !!! | TGCATCTGTTTTTGCAAGAG+AGG | + | chr2.3:905004-905023 | MS.gene86422:intron | 40.0% |
| AAGAAGCCAAGAAGGAATGG+TGG | - | chr2.3:901835-901854 | None:intergenic | 45.0% | |
| ACAAATGCAGTGGGATATGG+AGG | + | chr2.3:905310-905329 | MS.gene86422:CDS | 45.0% | |
| ACTATAGCTCTTCGCCTAGA+TGG | + | chr2.3:903521-903540 | MS.gene86422:CDS | 45.0% | |
| ACTCTTGAAGCCTCTTCTGA+AGG | - | chr2.3:906070-906089 | None:intergenic | 45.0% | |
| AGCATTAGCTGGTGTGAAGT+CGG | - | chr2.3:903549-903568 | None:intergenic | 45.0% | |
| AGGATCCAAGATGGTTCACA+TGG | + | chr2.3:903254-903273 | MS.gene86422:CDS | 45.0% | |
| AGTGGGATATGGAGGAACTT+CGG | + | chr2.3:905318-905337 | MS.gene86422:CDS | 45.0% | |
| AGTGTGCAATCCTTCAGAAG+AGG | + | chr2.3:906057-906076 | MS.gene86422:CDS | 45.0% | |
| ATACCAAGAGGAAGAGGAGA+AGG | - | chr2.3:901729-901748 | None:intergenic | 45.0% | |
| ATGTTTCGCATGACCTTCCT+GGG | + | chr2.3:903645-903664 | MS.gene86422:CDS | 45.0% | |
| CAATCCATACCAAGAGGAAG+AGG | - | chr2.3:901735-901754 | None:intergenic | 45.0% | |
| CATGGTTATGGTAAAGCTCG+TGG | + | chr2.3:903272-903291 | MS.gene86422:CDS | 45.0% | |
| CCATCACATAGGATCCAAGA+TGG | + | chr2.3:903245-903264 | MS.gene86422:CDS | 45.0% | |
| CCATCTTGGATCCTATGTGA+TGG | - | chr2.3:903248-903267 | None:intergenic | 45.0% | |
| CTAGTGGTGGTAATAGCTTG+AGG | - | chr2.3:901998-902017 | None:intergenic | 45.0% | |
| CTCTTCCTCTTGGTATGGAT+TGG | + | chr2.3:901733-901752 | MS.gene86422:CDS | 45.0% | |
| GAAGAAGAAGGAGAGGATTG+AGG | - | chr2.3:901861-901880 | None:intergenic | 45.0% | |
| GACGGCGTTTATTAGAGGAT+TGG | + | chr2.3:902961-902980 | MS.gene86422:CDS | 45.0% | |
| GATAAGTTTCAGCACGCAAG+AGG | - | chr2.3:904929-904948 | None:intergenic | 45.0% | |
| GCGCAATATGATTCTAGTGG+TGG | - | chr2.3:902011-902030 | None:intergenic | 45.0% | |
| GCGGGATTCAGCTATACATA+AGG | + | chr2.3:904604-904623 | MS.gene86422:intron | 45.0% | |
| GGACACCATATAGAAGGCTA+AGG | - | chr2.3:906657-906676 | None:intergenic | 45.0% | |
| GGAGGAAAAAGTAGATGTGG+AGG | + | chr2.3:905684-905703 | MS.gene86422:CDS | 45.0% | |
| GGGAAGCAAGCAGTAAAACA+TGG | - | chr2.3:906635-906654 | None:intergenic | 45.0% | |
| GGGGCCGTTATAGATTGTAA+AGG | - | chr2.3:906318-906337 | None:intergenic | 45.0% | |
| GTGGTACTACACCATCACAT+AGG | + | chr2.3:903234-903253 | MS.gene86422:CDS | 45.0% | |
| GTTCTAACTGAGAGCTTCTG+AGG | - | chr2.3:905639-905658 | None:intergenic | 45.0% | |
| TCATCTGCTGCATCTGTTTC+TGG | + | chr2.3:903296-903315 | MS.gene86422:CDS | 45.0% | |
| TCCAAGAAGAAGAAGAGGTG+TGG | - | chr2.3:901803-901822 | None:intergenic | 45.0% | |
| TCTCAAATCCGAGGAGAATG+AGG | + | chr2.3:906887-906906 | MS.gene86422:CDS | 45.0% | |
| TCTCTTCCACCATTCCTTCT+TGG | + | chr2.3:901826-901845 | MS.gene86422:CDS | 45.0% | |
| TGAGGAACAAGAAGCCAAGA+AGG | - | chr2.3:901843-901862 | None:intergenic | 45.0% | |
| TTCAAGGATGCCCCACATTA+TGG | + | chr2.3:904843-904862 | MS.gene86422:intron | 45.0% | |
| TTCTCCTCTTCCTCTTGGTA+TGG | + | chr2.3:901728-901747 | MS.gene86422:CDS | 45.0% | |
| ! | AACTTGTGTCGCTCATCCAA+TGG | - | chr2.3:903713-903732 | None:intergenic | 45.0% |
| ! | ACAGAACTAGCTCAGGCTTT+TGG | + | chr2.3:904429-904448 | MS.gene86422:intron | 45.0% |
| ! | CAAGAAGAAGAAGAGGTGTG+GGG | - | chr2.3:901801-901820 | None:intergenic | 45.0% |
| ! | CCAAGAAGAAGAAGAGGTGT+GGG | - | chr2.3:901802-901821 | None:intergenic | 45.0% |
| ! | CTTCCCCTTAGCCTTCTATA+TGG | + | chr2.3:906649-906668 | MS.gene86422:intron | 45.0% |
| ! | GGAAAATCCGTCCTTTTGCA+TGG | - | chr2.3:906432-906451 | None:intergenic | 45.0% |
| ! | GTTCAAGTTCGAGGAGGAAA+GGG | + | chr2.3:904805-904824 | MS.gene86422:intron | 45.0% |
| ! | TGTTCAAGTTCGAGGAGGAA+AGG | + | chr2.3:904804-904823 | MS.gene86422:intron | 45.0% |
| !! | TTCAACATCCGTTTTTGCCG+TGG | - | chr2.3:903771-903790 | None:intergenic | 45.0% |
| !!! | GCAGGCTGTTTTAACCGAAA+AGG | + | chr2.3:905277-905296 | MS.gene86422:CDS | 45.0% |
| !!! | GTTTTTTTATTTTTTTATTT+AGG | + | chr2.3:902663-902682 | MS.gene86422:intron | 5.0% |
| AATGTTGTGGATGCTGCGGA+AGG | + | chr2.3:906747-906766 | MS.gene86422:CDS | 50.0% | |
| ACACCTTCTCCTCTTCCTCT+TGG | + | chr2.3:901723-901742 | MS.gene86422:CDS | 50.0% | |
| ACAGCTCAGCGAATTGATGG+AGG | + | chr2.3:905666-905685 | MS.gene86422:CDS | 50.0% | |
| ACGACGGGATCAGAAGAAGA+AGG | - | chr2.3:901873-901892 | None:intergenic | 50.0% | |
| AGCTGTGTCAACTTGGCTTC+AGG | + | chr2.3:903622-903641 | MS.gene86422:CDS | 50.0% | |
| CAGCTCAGAAACCTCAGAAG+GGG | - | chr2.3:903330-903349 | None:intergenic | 50.0% | |
| CCACCACCACCTAATTGGAA+CGG | + | chr2.3:901759-901778 | MS.gene86422:CDS | 50.0% | |
| CCAGCTCAGAAACCTCAGAA+GGG | - | chr2.3:903331-903350 | None:intergenic | 50.0% | |
| CCCACACCTCTTCTTCTTCT+TGG | + | chr2.3:901799-901818 | MS.gene86422:CDS | 50.0% | |
| CGAGTTCAGCTGTGTCAACT+TGG | + | chr2.3:903615-903634 | MS.gene86422:CDS | 50.0% | |
| CTAATAAACGCCGTCGCTGA+AGG | - | chr2.3:902956-902975 | None:intergenic | 50.0% | |
| CTGAGTTTCCAGCGGATACA+CGG | - | chr2.3:903673-903692 | None:intergenic | 50.0% | |
| CTGCAGAGAAAACATGCAGC+AGG | + | chr2.3:905259-905278 | MS.gene86422:CDS | 50.0% | |
| GACAAGGTCGCTGAGAATTC+TGG | + | chr2.3:903494-903513 | MS.gene86422:CDS | 50.0% | |
| GATGTTTCGCATGACCTTCC+TGG | + | chr2.3:903644-903663 | MS.gene86422:CDS | 50.0% | |
| GCAACAGCTCAGCGAATTGA+TGG | + | chr2.3:905663-905682 | MS.gene86422:CDS | 50.0% | |
| GGACTCCAATCCATACCAAG+AGG | - | chr2.3:901741-901760 | None:intergenic | 50.0% | |
| GGCGAAGGCAGGTATTTCAT+GGG | - | chr2.3:902742-902761 | None:intergenic | 50.0% | |
| GGGATCAGAAGAAGAAGGAG+AGG | - | chr2.3:901868-901887 | None:intergenic | 50.0% | |
| GTTGCAGCAAGAGCTAGATG+TGG | + | chr2.3:905519-905538 | MS.gene86422:CDS | 50.0% | |
| TCAGATGAACAGACGTCTGG+TGG | + | chr2.3:903215-903234 | MS.gene86422:CDS | 50.0% | |
| TCAGCGACGGCGTTTATTAG+AGG | + | chr2.3:902956-902975 | MS.gene86422:intron | 50.0% | |
| TCTCCTCGGATTTGAGAGCA+CGG | - | chr2.3:906884-906903 | None:intergenic | 50.0% | |
| TGGCGAAGGCAGGTATTTCA+TGG | - | chr2.3:902743-902762 | None:intergenic | 50.0% | |
| TTCTTCTTCTGATCCCGTCG+TGG | + | chr2.3:901872-901891 | MS.gene86422:CDS | 50.0% | |
| ! | GAACTAGCTCAGGCTTTTGG+AGG | + | chr2.3:904432-904451 | MS.gene86422:intron | 50.0% |
| ! | GAGACTAGCCACGGCAAAAA+CGG | + | chr2.3:903760-903779 | MS.gene86422:CDS | 50.0% |
| ! | TGGTGATGATACCCCTTCTG+AGG | + | chr2.3:903316-903335 | MS.gene86422:CDS | 50.0% |
| !! | CCTTCTGAGGTTTCTGAGCT+GGG | + | chr2.3:903329-903348 | MS.gene86422:CDS | 50.0% |
| !! | GATTGGTCTCTTGCTTGCAG+AGG | + | chr2.3:906184-906203 | MS.gene86422:CDS | 50.0% |
| !!! | ATCTTTTTCGGTGGTGGCGA+AGG | - | chr2.3:902757-902776 | None:intergenic | 50.0% |
| ATGGGATCAGGCACAGCTCT+TGG | + | chr2.3:906710-906729 | MS.gene86422:intron | 55.0% | |
| CCCAGCTCAGAAACCTCAGA+AGG | - | chr2.3:903332-903351 | None:intergenic | 55.0% | |
| GGACCGTTCCAATTAGGTGG+TGG | - | chr2.3:901765-901784 | None:intergenic | 55.0% | |
| GGAGTCCACCACCACCTAAT+TGG | + | chr2.3:901754-901773 | MS.gene86422:CDS | 55.0% | |
| GGGATATGGAGGAACTTCGG+AGG | + | chr2.3:905321-905340 | MS.gene86422:CDS | 55.0% | |
| GTGGGACCGTTCCAATTAGG+TGG | - | chr2.3:901768-901787 | None:intergenic | 55.0% | |
| TTTCTGAGCTGGGAACACCG+AGG | + | chr2.3:903339-903358 | MS.gene86422:CDS | 55.0% | |
| ! | CCAGAAGCAGAGACTAGCCA+CGG | + | chr2.3:903751-903770 | MS.gene86422:CDS | 55.0% |
| ! | CCGTTCCAATTAGGTGGTGG+TGG | - | chr2.3:901762-901781 | None:intergenic | 55.0% |
| ! | GTGGTGGGACCGTTCCAATT+AGG | - | chr2.3:901771-901790 | None:intergenic | 55.0% |
| ! | GTGTGAAGTCGGCTCCATCT+AGG | - | chr2.3:903538-903557 | None:intergenic | 55.0% |
| ! | TGTGGAGGTATGGCCCTTTC+TGG | + | chr2.3:905699-905718 | MS.gene86422:intron | 55.0% |
| !! | CCCTTCTGAGGTTTCTGAGC+TGG | + | chr2.3:903328-903347 | MS.gene86422:CDS | 55.0% |
| !! | CGTGGCTAGTCTCTGCTTCT+GGG | - | chr2.3:903753-903772 | None:intergenic | 55.0% |
| GAAACGGCGTCGTTTCCGAG+TGG | - | chr2.3:901699-901718 | None:intergenic | 60.0% | |
| ! | CCTCGGATTTGAGAGCACGG+CGG | - | chr2.3:906881-906900 | None:intergenic | 60.0% |
| !! | CCGTGGCTAGTCTCTGCTTC+TGG | - | chr2.3:903754-903773 | None:intergenic | 60.0% |
| !! | TTTTCGGTGGTGGCGAAGGC+AGG | - | chr2.3:902753-902772 | None:intergenic | 60.0% |
| CCGCCGTGCTCTCAAATCCG+AGG | + | chr2.3:906878-906897 | MS.gene86422:CDS | 65.0% | |
| CGGATACACGGCTCCCAGGA+AGG | - | chr2.3:903661-903680 | None:intergenic | 65.0% | |
| GGAACGGTCCCACCACTCTC+TGG | + | chr2.3:901775-901794 | MS.gene86422:CDS | 65.0% | |
| GTGTGGGGCCAGAGAGTGGT+GGG | - | chr2.3:901786-901805 | None:intergenic | 65.0% | |
| ! | AGAGGTGTGGGGCCAGAGAG+TGG | - | chr2.3:901790-901809 | None:intergenic | 65.0% |
| CCAGCGGATACACGGCTCCC+AGG | - | chr2.3:903665-903684 | None:intergenic | 70.0% | |
| CCTGGGAGCCGTGTATCCGC+TGG | + | chr2.3:903662-903681 | MS.gene86422:CDS | 70.0% | |
| GGTGTGGGGCCAGAGAGTGG+TGG | - | chr2.3:901787-901806 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 901588 | 906962 | 901588 | ID=MS.gene86422 |
| chr2.3 | mRNA | 901588 | 906962 | 901588 | ID=MS.gene86422.t1;Parent=MS.gene86422 |
| chr2.3 | exon | 901588 | 901893 | 901588 | ID=MS.gene86422.t1.exon1;Parent=MS.gene86422.t1 |
| chr2.3 | CDS | 901588 | 901893 | 901588 | ID=cds.MS.gene86422.t1;Parent=MS.gene86422.t1 |
| chr2.3 | exon | 901965 | 902063 | 901965 | ID=MS.gene86422.t1.exon2;Parent=MS.gene86422.t1 |
| chr2.3 | CDS | 901965 | 902063 | 901965 | ID=cds.MS.gene86422.t1;Parent=MS.gene86422.t1 |
| chr2.3 | exon | 902724 | 902810 | 902724 | ID=MS.gene86422.t1.exon3;Parent=MS.gene86422.t1 |
| chr2.3 | CDS | 902724 | 902810 | 902724 | ID=cds.MS.gene86422.t1;Parent=MS.gene86422.t1 |
| chr2.3 | exon | 902960 | 903068 | 902960 | ID=MS.gene86422.t1.exon4;Parent=MS.gene86422.t1 |
| chr2.3 | CDS | 902960 | 903068 | 902960 | ID=cds.MS.gene86422.t1;Parent=MS.gene86422.t1 |
| chr2.3 | exon | 903189 | 903847 | 903189 | ID=MS.gene86422.t1.exon5;Parent=MS.gene86422.t1 |
| chr2.3 | CDS | 903189 | 903847 | 903189 | ID=cds.MS.gene86422.t1;Parent=MS.gene86422.t1 |
| chr2.3 | exon | 905218 | 905382 | 905218 | ID=MS.gene86422.t1.exon6;Parent=MS.gene86422.t1 |
| chr2.3 | CDS | 905218 | 905382 | 905218 | ID=cds.MS.gene86422.t1;Parent=MS.gene86422.t1 |
| chr2.3 | exon | 905463 | 905705 | 905463 | ID=MS.gene86422.t1.exon7;Parent=MS.gene86422.t1 |
| chr2.3 | CDS | 905463 | 905705 | 905463 | ID=cds.MS.gene86422.t1;Parent=MS.gene86422.t1 |
| chr2.3 | exon | 905990 | 906205 | 905990 | ID=MS.gene86422.t1.exon8;Parent=MS.gene86422.t1 |
| chr2.3 | CDS | 905990 | 906205 | 905990 | ID=cds.MS.gene86422.t1;Parent=MS.gene86422.t1 |
| chr2.3 | exon | 906720 | 906962 | 906720 | ID=MS.gene86422.t1.exon9;Parent=MS.gene86422.t1 |
| chr2.3 | CDS | 906720 | 906962 | 906720 | ID=cds.MS.gene86422.t1;Parent=MS.gene86422.t1 |
| Gene Sequence |
| Protein sequence |
