Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015076.t1 | XP_013461789.1 | 98.6 | 441 | 6 | 0 | 1 | 441 | 1 | 441 | 6.70E-255 | 889.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015076.t1 | Q93ZG3 | 65.5 | 449 | 144 | 2 | 4 | 441 | 2 | 450 | 2.0e-175 | 616.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015076.t1 | A0A072V1E5 | 98.6 | 441 | 6 | 0 | 1 | 441 | 1 | 441 | 4.8e-255 | 889.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene038078 | MS.gene015076 | PPI |
| MS.gene015076 | MS.gene32874 | PPI |
| MS.gene015076 | MS.gene036055 | PPI |
| MS.gene015076 | MS.gene37481 | PPI |
| MS.gene23970 | MS.gene015076 | PPI |
| MS.gene015076 | MS.gene89575 | PPI |
| MS.gene012871 | MS.gene015076 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015076.t1 | MTR_3g103170 | 98.639 | 441 | 6 | 0 | 1 | 441 | 1 | 441 | 0.0 | 910 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015076.t1 | AT1G27840 | 65.479 | 449 | 144 | 2 | 4 | 441 | 2 | 450 | 0.0 | 634 |
| MS.gene015076.t1 | AT1G27840 | 65.333 | 450 | 144 | 3 | 4 | 441 | 2 | 451 | 0.0 | 629 |
| MS.gene015076.t1 | AT1G19750 | 65.854 | 451 | 139 | 4 | 4 | 441 | 2 | 450 | 0.0 | 624 |
| MS.gene015076.t1 | AT1G27840 | 56.347 | 449 | 128 | 4 | 4 | 441 | 2 | 393 | 4.96e-180 | 508 |
| MS.gene015076.t1 | AT1G19750 | 65.672 | 335 | 100 | 4 | 120 | 441 | 1 | 333 | 3.91e-158 | 450 |
| MS.gene015076.t1 | AT2G16780 | 28.421 | 190 | 115 | 7 | 60 | 245 | 183 | 355 | 4.54e-11 | 64.7 |
| MS.gene015076.t1 | AT5G23430 | 27.481 | 131 | 92 | 2 | 99 | 229 | 10 | 137 | 7.06e-11 | 65.1 |
| MS.gene015076.t1 | AT5G23430 | 27.481 | 131 | 92 | 2 | 99 | 229 | 10 | 137 | 7.18e-11 | 65.1 |
| MS.gene015076.t1 | AT5G23430 | 27.481 | 131 | 92 | 2 | 99 | 229 | 10 | 137 | 7.18e-11 | 65.1 |
Find 94 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCGATTAGCGAAGGAATT+TGG | 0.195129 | 3.2:+85559014 | None:intergenic |
| ATGCTGTATCTTCAGCTATT+TGG | 0.204367 | 3.2:-85558746 | MS.gene015076:CDS |
| CAGCATATTTATGAGCTAAT+TGG | 0.265136 | 3.2:+85558763 | None:intergenic |
| ATGATCATCATGTTAATGTT+TGG | 0.280560 | 3.2:-85558686 | MS.gene015076:CDS |
| AACTGGCAGGCTATCATCTA+AGG | 0.289330 | 3.2:-85557086 | MS.gene015076:CDS |
| CGTCTTTGTGATATTGCTTC+TGG | 0.295957 | 3.2:-85558205 | MS.gene015076:CDS |
| GGATGTAATTTCTGCTTCAT+TGG | 0.303704 | 3.2:+85557061 | None:intergenic |
| TGATCATCATGTTAATGTTT+GGG | 0.326481 | 3.2:-85558685 | MS.gene015076:CDS |
| GCAGTCTTATACACCTTTCC+AGG | 0.331614 | 3.2:+85558289 | None:intergenic |
| ATTTGGTATCCCATTGATAC+TGG | 0.339602 | 3.2:-85558729 | MS.gene015076:CDS |
| TCATCGGCAATTGACCTTGC+AGG | 0.342730 | 3.2:+85553617 | None:intergenic |
| AGTGAATGGGTCTTGATTAC+CGG | 0.350685 | 3.2:-85557428 | MS.gene015076:CDS |
| GCATTTGCTCATACTTTGTC+TGG | 0.353584 | 3.2:-85558181 | MS.gene015076:CDS |
| GATCGTGCAACTGCTCATTA+TGG | 0.366149 | 3.2:-85557019 | MS.gene015076:CDS |
| TCTGAGATTGATTTAAAACT+TGG | 0.377456 | 3.2:+85557354 | None:intergenic |
| CAGGCATTTGATATGTGGTC+TGG | 0.378935 | 3.2:-85554765 | MS.gene015076:CDS |
| TGAGTTGTAGCTAATTGAAT+AGG | 0.379923 | 3.2:+85555068 | None:intergenic |
| TCCTGAGTAGAAATCATTCC+TGG | 0.383793 | 3.2:+85557040 | None:intergenic |
| GATGAATAAACCAGTATCAA+TGG | 0.420168 | 3.2:+85558719 | None:intergenic |
| CTTCTGTTAAATCAATTTGA+AGG | 0.421628 | 3.2:+85558913 | None:intergenic |
| CTCAGTTACTCCAGCTATCC+TGG | 0.425023 | 3.2:+85553480 | None:intergenic |
| TTGGCAACTTTCTTCTGTCC+AGG | 0.433328 | 3.2:+85557133 | None:intergenic |
| AACATCAAAGACAGAGAATC+CGG | 0.439433 | 3.2:-85559047 | MS.gene015076:CDS |
| CTGATTCAAGATTGAGATTG+TGG | 0.440434 | 3.2:-85555154 | MS.gene015076:CDS |
| CAAACGTTCCGTGCTAACTA+AGG | 0.443106 | 3.2:-85557303 | MS.gene015076:intron |
| ATCCCGACGACCAGGATAGC+TGG | 0.447196 | 3.2:-85553490 | MS.gene015076:CDS |
| AATGGTCTGCTTCAAGTGAA+TGG | 0.451347 | 3.2:-85557442 | MS.gene015076:CDS |
| GATACTGGTTTATTCATCAC+TGG | 0.452740 | 3.2:-85558714 | MS.gene015076:CDS |
| GGCAGTGGACATCTGCCAAC+TGG | 0.453300 | 3.2:-85557103 | MS.gene015076:CDS |
| CTGGTTTAATCAACAAGATC+AGG | 0.457234 | 3.2:-85554694 | MS.gene015076:intron |
| TTATTCAGGCATTTGATATG+TGG | 0.464525 | 3.2:-85554770 | MS.gene015076:intron |
| CTCCAGCTATCCTGGTCGTC+GGG | 0.468697 | 3.2:+85553488 | None:intergenic |
| TAGCGGTTTACGACGTTCAC+CGG | 0.471610 | 3.2:-85558854 | MS.gene015076:CDS |
| ACGATAGACAAATTCTTGTA+TGG | 0.472177 | 3.2:-85553643 | MS.gene015076:CDS |
| ATGAATAAACCAGTATCAAT+GGG | 0.473954 | 3.2:+85558720 | None:intergenic |
| CTTCAAATTGATTTAACAGA+AGG | 0.481429 | 3.2:-85558912 | MS.gene015076:CDS |
| CTCCGTCGAAATCGCTCGGC+CGG | 0.482142 | 3.2:+85558835 | None:intergenic |
| TTCTGTTAAATCAATTTGAA+GGG | 0.489653 | 3.2:+85558914 | None:intergenic |
| AAGAAAGTTGCCAATGGAAG+TGG | 0.491768 | 3.2:-85557124 | MS.gene015076:CDS |
| TCTCATACGCTTATTGCTGC+TGG | 0.491892 | 3.2:-85558247 | MS.gene015076:CDS |
| GTTGCCAATGGAAGTGGCAG+TGG | 0.492604 | 3.2:-85557118 | MS.gene015076:CDS |
| CAAAGAGTGCACCATTTCAT+CGG | 0.496860 | 3.2:+85553601 | None:intergenic |
| AATCAATCTCAGACGCAGCT+TGG | 0.504418 | 3.2:-85557344 | MS.gene015076:CDS |
| CCGAGCGATTTCGACGGAGA+TGG | 0.504812 | 3.2:-85558831 | MS.gene015076:CDS |
| GCTCATTATGGTGCTGTGAC+AGG | 0.504885 | 3.2:-85557007 | MS.gene015076:CDS |
| AATTAATTGCGCCTTTGTGA+GGG | 0.509005 | 3.2:+85558937 | None:intergenic |
| CGAAGGAGATCCCGACGACC+AGG | 0.513845 | 3.2:-85553498 | MS.gene015076:CDS |
| ATGGTCTGCTTCAAGTGAAT+GGG | 0.514760 | 3.2:-85557441 | MS.gene015076:CDS |
| AGGCATTTGATATGTGGTCT+GGG | 0.514949 | 3.2:-85554764 | MS.gene015076:CDS |
| AGATTGTGGGATGTTGAGTC+AGG | 0.515425 | 3.2:-85555140 | MS.gene015076:CDS |
| GTGGTGAATTTCAAAATGCC+TGG | 0.516745 | 3.2:-85558307 | MS.gene015076:CDS |
| AAGGTCAATTGCCGATGAAA+TGG | 0.525899 | 3.2:-85553612 | MS.gene015076:intron |
| GTGGACATCTGCCAACTGGC+AGG | 0.526487 | 3.2:-85557099 | MS.gene015076:CDS |
| GAATTAATTGCGCCTTTGTG+AGG | 0.526750 | 3.2:+85558936 | None:intergenic |
| ATCTTGTTGATTAAACCAGC+AGG | 0.528118 | 3.2:+85554698 | None:intergenic |
| TCCAGGAATGATTTCTACTC+AGG | 0.535159 | 3.2:-85557041 | MS.gene015076:CDS |
| ATGAATCTATAAACTCCTGC+TGG | 0.535705 | 3.2:-85554713 | MS.gene015076:CDS |
| ATGTCCACTGCCACTTCCAT+TGG | 0.540411 | 3.2:+85557114 | None:intergenic |
| GTGAATGGGTCTTGATTACC+GGG | 0.543515 | 3.2:-85557427 | MS.gene015076:CDS |
| ACTTTCACAACCCTCATGCA+TGG | 0.546812 | 3.2:+85555023 | None:intergenic |
| GGCATGTATCTCTTAAGTGC+AGG | 0.549168 | 3.2:-85556965 | MS.gene015076:intron |
| AGCACGGAACGTTTGAGTAG+AGG | 0.550967 | 3.2:+85557311 | None:intergenic |
| ACTCCAGCTATCCTGGTCGT+CGG | 0.569326 | 3.2:+85553487 | None:intergenic |
| TTCTTGTATGGTCACCTGCA+AGG | 0.573554 | 3.2:-85553631 | MS.gene015076:CDS |
| TGATTCAAGATTGAGATTGT+GGG | 0.573902 | 3.2:-85555153 | MS.gene015076:CDS |
| TAGGTTTGCTTGTTTGCAAG+CGG | 0.575957 | 3.2:+85555087 | None:intergenic |
| CCATCTCCGTCGAAATCGCT+CGG | 0.578915 | 3.2:+85558831 | None:intergenic |
| TGTGATAAACTGCAGGGCGA+AGG | 0.586427 | 3.2:-85553515 | MS.gene015076:intron |
| ATGAAGCAGAAATTACATCC+AGG | 0.589532 | 3.2:-85557058 | MS.gene015076:CDS |
| ACGGAACGTTTGAGTAGAGG+TGG | 0.594941 | 3.2:+85557314 | None:intergenic |
| TTGCCACAGGAGTTGTACAC+AGG | 0.597998 | 3.2:-85553671 | MS.gene015076:intron |
| GGATTGAAAGTAACAGAGGA+TGG | 0.605564 | 3.2:-85556986 | MS.gene015076:CDS |
| GCTTATTGCTGCTGGAACTG+AGG | 0.609754 | 3.2:-85558239 | MS.gene015076:CDS |
| ATTAATTGCGCCTTTGTGAG+GGG | 0.611011 | 3.2:+85558938 | None:intergenic |
| GGACAGAAGAAAGTTGCCAA+TGG | 0.611679 | 3.2:-85557130 | MS.gene015076:CDS |
| ATGGTGTAATGACTGTTGAA+TGG | 0.628070 | 3.2:-85557460 | MS.gene015076:CDS |
| ACTGGCAGGCTATCATCTAA+GGG | 0.630654 | 3.2:-85557085 | MS.gene015076:CDS |
| CACCGGCCGAGCGATTTCGA+CGG | 0.632724 | 3.2:-85558837 | MS.gene015076:CDS |
| GTGAACGTCGTAAACCGCTA+CGG | 0.633953 | 3.2:+85558857 | None:intergenic |
| CCACAGGAGTTGTACACAGG+TGG | 0.635650 | 3.2:-85553668 | MS.gene015076:intron |
| GAATTTCAAAATGCCTGGAA+AGG | 0.640053 | 3.2:-85558302 | MS.gene015076:CDS |
| TTAGATGATAGCCTGCCAGT+TGG | 0.643193 | 3.2:+85557088 | None:intergenic |
| GAATGGGTCTTGATTACCGG+GGG | 0.646184 | 3.2:-85557425 | MS.gene015076:CDS |
| TTGGGACACTAACACCACTC+AGG | 0.656420 | 3.2:-85558667 | MS.gene015076:intron |
| CATACTTTGTCTGGTCATCG+TGG | 0.668716 | 3.2:-85558172 | MS.gene015076:intron |
| CGGAACGTTTGAGTAGAGGT+GGG | 0.672074 | 3.2:+85557315 | None:intergenic |
| GACAGGATTGAAAGTAACAG+AGG | 0.681612 | 3.2:-85556990 | MS.gene015076:CDS |
| TGCGTCAGATGCATCCGTAG+CGG | 0.693318 | 3.2:-85558871 | MS.gene015076:CDS |
| ATGCTCCGAATATGGATACG+TGG | 0.705582 | 3.2:-85559073 | None:intergenic |
| GAACTCGTTTCCCCTCACAA+AGG | 0.708363 | 3.2:-85558948 | MS.gene015076:CDS |
| AACGCACGTACGATACTACG+TGG | 0.751494 | 3.2:-85554741 | MS.gene015076:CDS |
| TGAATGGGTCTTGATTACCG+GGG | 0.757650 | 3.2:-85557426 | MS.gene015076:CDS |
| AAGATTGAATAGAACCTGAG+TGG | 0.761909 | 3.2:+85558653 | None:intergenic |
| AATGGGTCTTGATTACCGGG+GGG | 0.785902 | 3.2:-85557424 | MS.gene015076:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATTAATTTACAGTTA+AGG | + | chr3.2:85556924-85556943 | None:intergenic | 10.0% |
| !! | ATTTAAATTAGAATCAATTA+CGG | + | chr3.2:85554018-85554037 | None:intergenic | 10.0% |
| !!! | AACTAAATTTTACAATAAAA+AGG | - | chr3.2:85558285-85558304 | MS.gene015076:CDS | 10.0% |
| !!! | TTTTTTTTTTATATCTCATT+TGG | + | chr3.2:85556556-85556575 | None:intergenic | 10.0% |
| !! | AAGGAAAAAAAAAAAATAGT+GGG | - | chr3.2:85554531-85554550 | MS.gene015076:intron | 15.0% |
| !! | AGGTTAAATCATATTTATAT+AGG | + | chr3.2:85556647-85556666 | None:intergenic | 15.0% |
| !! | GGTTAAATCATATTTATATA+GGG | + | chr3.2:85556646-85556665 | None:intergenic | 15.0% |
| !! | TAACTTAAATTCAAGTATTT+AGG | - | chr3.2:85555333-85555352 | MS.gene015076:intron | 15.0% |
| !! | TAAGGAAAAAAAAAAAATAG+TGG | - | chr3.2:85554530-85554549 | MS.gene015076:intron | 15.0% |
| !! | TATTATATTTAACAAAAGCT+TGG | - | chr3.2:85556668-85556687 | MS.gene015076:intron | 15.0% |
| !!! | ACTGTAAATTAATATTTTGA+CGG | - | chr3.2:85556926-85556945 | MS.gene015076:intron | 15.0% |
| !!! | ATACTATTCTAAAAACTTTA+GGG | + | chr3.2:85554623-85554642 | None:intergenic | 15.0% |
| !!! | ATTTTAGTTAGAATCAATAT+TGG | - | chr3.2:85554096-85554115 | MS.gene015076:intron | 15.0% |
| !!! | GCTTTTGTTAAATATAATAT+AGG | + | chr3.2:85556667-85556686 | None:intergenic | 15.0% |
| !!! | TAAAGGTTTTTTTTTAACAA+CGG | + | chr3.2:85557590-85557609 | None:intergenic | 15.0% |
| !!! | TATACTATTCTAAAAACTTT+AGG | + | chr3.2:85554624-85554643 | None:intergenic | 15.0% |
| !!! | TCTATAAACATTTTTAATGA+TGG | - | chr3.2:85558262-85558281 | MS.gene015076:CDS | 15.0% |
| !! | AAAAAAGTAGAAGCAATTTA+TGG | - | chr3.2:85558318-85558337 | MS.gene015076:intron | 20.0% |
| !! | AAAATGTAAACAGGAAAAAA+GGG | + | chr3.2:85558068-85558087 | None:intergenic | 20.0% |
| !! | AACTAATTATATTCAGCAAA+AGG | + | chr3.2:85556249-85556268 | None:intergenic | 20.0% |
| !! | ACCATAAATTCTATTCTTAT+TGG | + | chr3.2:85558545-85558564 | None:intergenic | 20.0% |
| !! | AGAAATGATTATGACATATT+TGG | - | chr3.2:85553964-85553983 | MS.gene015076:intron | 20.0% |
| !! | GGAATAAATTATGAGTTTAA+TGG | + | chr3.2:85558668-85558687 | None:intergenic | 20.0% |
| !! | GTTTACAAAACAAAAAACTA+CGG | + | chr3.2:85554469-85554488 | None:intergenic | 20.0% |
| !! | TAAAATGTAAACAGGAAAAA+AGG | + | chr3.2:85558069-85558088 | None:intergenic | 20.0% |
| !! | TCATTATCTCATATTATTAC+CGG | - | chr3.2:85556059-85556078 | MS.gene015076:intron | 20.0% |
| !! | TCCAATAAGAATAGAATTTA+TGG | - | chr3.2:85558541-85558560 | MS.gene015076:intron | 20.0% |
| !! | TTAAACTCATAATTTATTCC+AGG | - | chr3.2:85558668-85558687 | MS.gene015076:CDS | 20.0% |
| !! | TTCTGTTAAATCAATTTGAA+GGG | + | chr3.2:85553632-85553651 | None:intergenic | 20.0% |
| !!! | ATTACATGCATGTATATTTT+TGG | - | chr3.2:85554895-85554914 | MS.gene015076:intron | 20.0% |
| !!! | ATTGATAATGAATGATTTCT+CGG | + | chr3.2:85558424-85558443 | None:intergenic | 20.0% |
| !!! | CTGTAAATTAATATTTTGAC+GGG | - | chr3.2:85556927-85556946 | MS.gene015076:intron | 20.0% |
| !!! | CTGTTTTATAGAAAAGAAAA+TGG | - | chr3.2:85558108-85558127 | MS.gene015076:intron | 20.0% |
| !!! | GAGATTATTTTATATATGCA+TGG | - | chr3.2:85558977-85558996 | MS.gene015076:CDS | 20.0% |
| !!! | TAATTTCTAAGAATACAATG+AGG | - | chr3.2:85557729-85557748 | MS.gene015076:intron | 20.0% |
| !!! | TACTATTCTAAAAACTTTAG+GGG | + | chr3.2:85554622-85554641 | None:intergenic | 20.0% |
| !!! | TCAATTAGTTTATTTCCAAT+TGG | - | chr3.2:85556369-85556388 | MS.gene015076:intron | 20.0% |
| !!! | TTATGGTAGTTATTTTGAAA+AGG | - | chr3.2:85558558-85558577 | MS.gene015076:intron | 20.0% |
| !!! | TTGAATTTAAGTTAAGTACT+TGG | + | chr3.2:85555327-85555346 | None:intergenic | 20.0% |
| !!! | TTTCCAGGTTAAAATTTTTA+GGG | + | chr3.2:85556328-85556347 | None:intergenic | 20.0% |
| ! | AAAAAAAACCTTAGTTAGCA+CGG | + | chr3.2:85555251-85555270 | None:intergenic | 25.0% |
| ! | AAATTGCTATAGGTAATCAA+GGG | - | chr3.2:85555960-85555979 | MS.gene015076:intron | 25.0% |
| ! | AACAGTGAAATTAGAATAAG+AGG | + | chr3.2:85558093-85558112 | None:intergenic | 25.0% |
| ! | ACATAAAAGAAATCATGTGA+TGG | + | chr3.2:85555060-85555079 | None:intergenic | 25.0% |
| ! | ACATCAAAATATTTCCTCAT+AGG | + | chr3.2:85558509-85558528 | None:intergenic | 25.0% |
| ! | ACCTACAATCAATTTACAAT+AGG | + | chr3.2:85554215-85554234 | None:intergenic | 25.0% |
| ! | ACCTCAATTATATTACCAAT+TGG | + | chr3.2:85556387-85556406 | None:intergenic | 25.0% |
| ! | AGAATAGAATTATGACATAC+TGG | - | chr3.2:85554965-85554984 | MS.gene015076:intron | 25.0% |
| ! | ATAATATGTTCAGTATTAGC+AGG | + | chr3.2:85555871-85555890 | None:intergenic | 25.0% |
| ! | ATGAATAAACCAGTATCAAT+GGG | + | chr3.2:85553826-85553845 | None:intergenic | 25.0% |
| ! | ATGATCATCATGTTAATGTT+TGG | - | chr3.2:85553857-85553876 | MS.gene015076:intron | 25.0% |
| ! | CAGGCATATCTTATATTTAA+CGG | - | chr3.2:85556126-85556145 | MS.gene015076:intron | 25.0% |
| ! | CATCAAAATATTTCCTCATA+GGG | + | chr3.2:85558508-85558527 | None:intergenic | 25.0% |
| ! | CTTAGAAATTAGTTACTTAG+CGG | + | chr3.2:85557720-85557739 | None:intergenic | 25.0% |
| ! | CTTCTACTATGTTTATTTCA+CGG | + | chr3.2:85556845-85556864 | None:intergenic | 25.0% |
| ! | CTTCTGTTAAATCAATTTGA+AGG | + | chr3.2:85553633-85553652 | None:intergenic | 25.0% |
| ! | GAATAGAATTATGACATACT+GGG | - | chr3.2:85554966-85554985 | MS.gene015076:intron | 25.0% |
| ! | TAAATATAAGATATGCCTGA+AGG | + | chr3.2:85556125-85556144 | None:intergenic | 25.0% |
| ! | TAAGAGGATAAAATGTAAAC+AGG | + | chr3.2:85558077-85558096 | None:intergenic | 25.0% |
| ! | TAAGATTAGAGACTTTAATG+AGG | - | chr3.2:85558219-85558238 | MS.gene015076:CDS | 25.0% |
| ! | TATAGGGATATACATCTATA+AGG | + | chr3.2:85556630-85556649 | None:intergenic | 25.0% |
| ! | TATCTGTTTAATCTTAGACA+CGG | + | chr3.2:85554512-85554531 | None:intergenic | 25.0% |
| ! | TATTGTAAATTGATTGTAGG+TGG | - | chr3.2:85554214-85554233 | MS.gene015076:intron | 25.0% |
| ! | TCCTATTGTAAATTGATTGT+AGG | - | chr3.2:85554211-85554230 | MS.gene015076:intron | 25.0% |
| ! | TGAAAAGGCAGTTATAAAAT+AGG | - | chr3.2:85558573-85558592 | MS.gene015076:intron | 25.0% |
| ! | TGATCATCATGTTAATGTTT+GGG | - | chr3.2:85553858-85553877 | MS.gene015076:intron | 25.0% |
| ! | TTGAATGTAATAACATGTGT+CGG | + | chr3.2:85556034-85556053 | None:intergenic | 25.0% |
| ! | TTGCACAAGGAAAAAAATAA+AGG | + | chr3.2:85554750-85554769 | None:intergenic | 25.0% |
| ! | TTTCCTCAACTGTAAATTAA+GGG | - | chr3.2:85556805-85556824 | MS.gene015076:intron | 25.0% |
| !! | AAATATAAAGAAGTGCACAA+GGG | - | chr3.2:85557668-85557687 | MS.gene015076:intron | 25.0% |
| !! | AAGTATCTTTTGTATTTGTG+CGG | + | chr3.2:85557620-85557639 | None:intergenic | 25.0% |
| !! | ACTATTCTAAAAACTTTAGG+GGG | + | chr3.2:85554621-85554640 | None:intergenic | 25.0% |
| !! | AGTCCTTTTTCTTCTTTAAT+CGG | - | chr3.2:85558182-85558201 | MS.gene015076:CDS | 25.0% |
| !! | ATGATTTCTTTTATGTCAGA+TGG | - | chr3.2:85555064-85555083 | MS.gene015076:CDS | 25.0% |
| !! | ATTAAAAAGTGCATGAGATA+CGG | + | chr3.2:85558842-85558861 | None:intergenic | 25.0% |
| !! | CGTCATACTGATAATATTTT+TGG | - | chr3.2:85553918-85553937 | MS.gene015076:intron | 25.0% |
| !! | CTTCAAATTGATTTAACAGA+AGG | - | chr3.2:85553631-85553650 | MS.gene015076:CDS | 25.0% |
| !! | GTTTCCAGGTTAAAATTTTT+AGG | + | chr3.2:85556329-85556348 | None:intergenic | 25.0% |
| !! | TCCAATTGGTAATATAATTG+AGG | - | chr3.2:85556383-85556402 | MS.gene015076:intron | 25.0% |
| !! | TCTGAGATTGATTTAAAACT+TGG | + | chr3.2:85555192-85555211 | None:intergenic | 25.0% |
| !! | TGCTTTCAAATATTTTCACA+AGG | - | chr3.2:85555898-85555917 | MS.gene015076:intron | 25.0% |
| !! | TGTCTAAGATTAAACAGATA+AGG | - | chr3.2:85554512-85554531 | MS.gene015076:intron | 25.0% |
| !!! | ATGTCTAACTTTTTTGGATA+TGG | + | chr3.2:85555735-85555754 | None:intergenic | 25.0% |
| !!! | CTACTATCATGTTTATTTTG+TGG | + | chr3.2:85556876-85556895 | None:intergenic | 25.0% |
| !!! | GATTGGTTTTGAGAATTTAT+TGG | + | chr3.2:85556195-85556214 | None:intergenic | 25.0% |
| !!! | TTATTTTTTATCCTTGCACA+AGG | + | chr3.2:85554763-85554782 | None:intergenic | 25.0% |
| !!! | TTTATTTTTTTCCTTGTGCA+AGG | - | chr3.2:85554749-85554768 | MS.gene015076:CDS | 25.0% |
| !!! | TTTGTTTTCACCAGAATTAA+GGG | + | chr3.2:85554816-85554835 | None:intergenic | 25.0% |
| AAAATTGAATGAACCCTATG+AGG | - | chr3.2:85558492-85558511 | MS.gene015076:intron | 30.0% | |
| AAACAGATTCTACCATTTGA+CGG | + | chr3.2:85557928-85557947 | None:intergenic | 30.0% | |
| AAAGAAAATGGAAGAGATAC+AGG | - | chr3.2:85558120-85558139 | MS.gene015076:intron | 30.0% | |
| AACTAATCGTCTTACTATGT+AGG | + | chr3.2:85558599-85558618 | None:intergenic | 30.0% | |
| AATTGCTATAGGTAATCAAG+GGG | - | chr3.2:85555961-85555980 | MS.gene015076:intron | 30.0% | |
| ACATCCAATGCTTAACATAA+CGG | - | chr3.2:85554856-85554875 | MS.gene015076:intron | 30.0% | |
| ACGATAGACAAATTCTTGTA+TGG | - | chr3.2:85558900-85558919 | MS.gene015076:CDS | 30.0% | |
| AGAAAAATAGAACACAGTAG+AGG | - | chr3.2:85556503-85556522 | MS.gene015076:intron | 30.0% | |
| AGAAGAGAAGAAATACATCA+GGG | - | chr3.2:85556456-85556475 | MS.gene015076:intron | 30.0% | |
| AGACATATACAGCAAAAGAT+TGG | + | chr3.2:85556997-85557016 | None:intergenic | 30.0% | |
| AGATGCAAAAATAGTAACTC+CGG | + | chr3.2:85554727-85554746 | None:intergenic | 30.0% | |
| AGTCCGATTAAAGAAGAAAA+AGG | + | chr3.2:85558188-85558207 | None:intergenic | 30.0% | |
| ATACTTCAATCCAATAGAGT+TGG | + | chr3.2:85558782-85558801 | None:intergenic | 30.0% | |
| ATATCATTCTCCAACTCTAT+TGG | - | chr3.2:85558769-85558788 | MS.gene015076:CDS | 30.0% | |
| ATGTCGATGATATAAAGCAA+AGG | + | chr3.2:85555990-85556009 | None:intergenic | 30.0% | |
| CAAATTGCTATAGGTAATCA+AGG | - | chr3.2:85555959-85555978 | MS.gene015076:intron | 30.0% | |
| CAATGCATTCAAATTGCTAT+AGG | - | chr3.2:85555950-85555969 | MS.gene015076:intron | 30.0% | |
| CAGCATATTTATGAGCTAAT+TGG | + | chr3.2:85553783-85553802 | None:intergenic | 30.0% | |
| CTTAATTCTGGTGAAAACAA+AGG | - | chr3.2:85554815-85554834 | MS.gene015076:intron | 30.0% | |
| CTTTCCTCAACTGTAAATTA+AGG | - | chr3.2:85556804-85556823 | MS.gene015076:intron | 30.0% | |
| GAATATTCATTGTACAGAAG+CGG | + | chr3.2:85556166-85556185 | None:intergenic | 30.0% | |
| GATAGTAGAAGACAAATCAT+CGG | - | chr3.2:85556775-85556794 | MS.gene015076:intron | 30.0% | |
| GATAGTAGAAGACAAATCAT+TGG | - | chr3.2:85556775-85556794 | MS.gene015076:intron | 30.0% | |
| GATGAATAAACCAGTATCAA+TGG | + | chr3.2:85553827-85553846 | None:intergenic | 30.0% | |
| TAAATTGAGATCCATATCCA+AGG | + | chr3.2:85558724-85558743 | None:intergenic | 30.0% | |
| TAACTGTAAAATGAACATCC+CGG | + | chr3.2:85557984-85558003 | None:intergenic | 30.0% | |
| TAGAAGAGAAGAAATACATC+AGG | - | chr3.2:85556455-85556474 | MS.gene015076:intron | 30.0% | |
| TAGTTAGAATCAATATTGGC+AGG | - | chr3.2:85554100-85554119 | MS.gene015076:intron | 30.0% | |
| TGAGTTGTAGCTAATTGAAT+AGG | + | chr3.2:85557478-85557497 | None:intergenic | 30.0% | |
| TGATGTTATGTATTGTCGAA+AGG | - | chr3.2:85555026-85555045 | MS.gene015076:CDS | 30.0% | |
| TGATTCAAGATTGAGATTGT+GGG | - | chr3.2:85557390-85557409 | MS.gene015076:CDS | 30.0% | |
| TTGATGCATTACAAGAAAAC+AGG | + | chr3.2:85557308-85557327 | None:intergenic | 30.0% | |
| TTTGATTCCTGTGAGTAATA+AGG | + | chr3.2:85555377-85555396 | None:intergenic | 30.0% | |
| TTTGGTCATAAACATTCACA+AGG | + | chr3.2:85557020-85557039 | None:intergenic | 30.0% | |
| ! | AAAAGATTGGCTATTGCTAT+AGG | + | chr3.2:85556984-85557003 | None:intergenic | 30.0% |
| ! | ATTTGTGCGGCTAATTTTAA+AGG | + | chr3.2:85557607-85557626 | None:intergenic | 30.0% |
| ! | CAAATATAAAGAAGTGCACA+AGG | - | chr3.2:85557667-85557686 | MS.gene015076:intron | 30.0% |
| ! | GTAAGACGATTAGTTCTTAT+TGG | - | chr3.2:85558604-85558623 | MS.gene015076:intron | 30.0% |
| ! | TTAAAAAGTGCATGAGATAC+GGG | + | chr3.2:85558841-85558860 | None:intergenic | 30.0% |
| ! | TTGTTTTCACCAGAATTAAG+GGG | + | chr3.2:85554815-85554834 | None:intergenic | 30.0% |
| !! | TAATTGAGGTTCTGAAAAGT+TGG | - | chr3.2:85556397-85556416 | MS.gene015076:intron | 30.0% |
| !! | TATCATACATTGATTCCTGA+CGG | - | chr3.2:85556714-85556733 | MS.gene015076:intron | 30.0% |
| !! | TTATGTTAAGCATTGGATGT+TGG | + | chr3.2:85554856-85554875 | None:intergenic | 30.0% |
| !! | TTGTCTAGTTGGTATTCTTT+TGG | - | chr3.2:85558467-85558486 | MS.gene015076:intron | 30.0% |
| !!! | AATGATTTTGTTATTGCCAC+AGG | - | chr3.2:85558859-85558878 | MS.gene015076:CDS | 30.0% |
| !!! | CTCGTAATGTCTAACTTTTT+TGG | + | chr3.2:85555741-85555760 | None:intergenic | 30.0% |
| !!! | CTTTGTTTTCACCAGAATTA+AGG | + | chr3.2:85554817-85554836 | None:intergenic | 30.0% |
| !!! | GTGACTACTAATTGTTGTTT+TGG | + | chr3.2:85557038-85557057 | None:intergenic | 30.0% |
| AAAAGCTTGGACATCACATA+TGG | - | chr3.2:85556681-85556700 | MS.gene015076:intron | 35.0% | |
| AAAGTCATTGCTTGTCTAGT+TGG | - | chr3.2:85558456-85558475 | MS.gene015076:intron | 35.0% | |
| AACATCAAAGACAGAGAATC+CGG | - | chr3.2:85553496-85553515 | MS.gene015076:CDS | 35.0% | |
| AAGAATCAACCCCTTAATTC+TGG | - | chr3.2:85554803-85554822 | MS.gene015076:intron | 35.0% | |
| AAGATTGAATAGAACCTGAG+TGG | + | chr3.2:85553893-85553912 | None:intergenic | 35.0% | |
| AATTAATTGCGCCTTTGTGA+GGG | + | chr3.2:85553609-85553628 | None:intergenic | 35.0% | |
| AATTAGTTACTTAGCGGTTG+AGG | + | chr3.2:85557714-85557733 | None:intergenic | 35.0% | |
| ACAATTAGTAGTCACTCAAG+AGG | - | chr3.2:85557043-85557062 | MS.gene015076:CDS | 35.0% | |
| AGCTTGACATATTTCACAAG+TGG | + | chr3.2:85554922-85554941 | None:intergenic | 35.0% | |
| AGTCATAGGCAGACTTTATT+TGG | - | chr3.2:85556301-85556320 | MS.gene015076:intron | 35.0% | |
| AGTGCTAATCATTATGCTGA+AGG | + | chr3.2:85554674-85554693 | None:intergenic | 35.0% | |
| ATCAACTTGAAACCGATCAA+TGG | - | chr3.2:85558346-85558365 | MS.gene015076:intron | 35.0% | |
| ATGAAGCAGAAATTACATCC+AGG | - | chr3.2:85555485-85555504 | MS.gene015076:intron | 35.0% | |
| ATGAATCTATAAACTCCTGC+TGG | - | chr3.2:85557830-85557849 | MS.gene015076:intron | 35.0% | |
| ATGCTGTATCTTCAGCTATT+TGG | - | chr3.2:85553797-85553816 | MS.gene015076:intron | 35.0% | |
| ATGGTGTAATGACTGTTGAA+TGG | - | chr3.2:85555083-85555102 | MS.gene015076:CDS | 35.0% | |
| ATTAGTTACTTAGCGGTTGA+GGG | + | chr3.2:85557713-85557732 | None:intergenic | 35.0% | |
| ATTTGGTATCCCATTGATAC+TGG | - | chr3.2:85553814-85553833 | MS.gene015076:intron | 35.0% | |
| CAACCCTTAATTTACAGTTG+AGG | + | chr3.2:85556811-85556830 | None:intergenic | 35.0% | |
| CAATCACTAGACATAAAGCA+TGG | - | chr3.2:85556210-85556229 | MS.gene015076:intron | 35.0% | |
| CATGCAGATACATTCATCAA+AGG | + | chr3.2:85554056-85554075 | None:intergenic | 35.0% | |
| CATGCTTTATGTCTAGTGAT+TGG | + | chr3.2:85556212-85556231 | None:intergenic | 35.0% | |
| CCTTCTCTAATCAACTCATA+CGG | - | chr3.2:85558018-85558037 | MS.gene015076:intron | 35.0% | |
| CTGATTCAAGATTGAGATTG+TGG | - | chr3.2:85557389-85557408 | MS.gene015076:CDS | 35.0% | |
| CTGGTTTAATCAACAAGATC+AGG | - | chr3.2:85557849-85557868 | MS.gene015076:intron | 35.0% | |
| GAAAAAAGGGAAGGAAAGTA+AGG | + | chr3.2:85558055-85558074 | None:intergenic | 35.0% | |
| GAATTTCAAAATGCCTGGAA+AGG | - | chr3.2:85554241-85554260 | MS.gene015076:intron | 35.0% | |
| GATTTCTCGGTAAAATCAGT+AGG | + | chr3.2:85558411-85558430 | None:intergenic | 35.0% | |
| GCTTGACATATTTCACAAGT+GGG | + | chr3.2:85554921-85554940 | None:intergenic | 35.0% | |
| GGATGTAATTTCTGCTTCAT+TGG | + | chr3.2:85555485-85555504 | None:intergenic | 35.0% | |
| GTAAAATCAGTAGGTTGTTG+TGG | + | chr3.2:85558402-85558421 | None:intergenic | 35.0% | |
| GTCAAATGGTAGAATCTGTT+TGG | - | chr3.2:85557927-85557946 | MS.gene015076:intron | 35.0% | |
| GTGCTAATCATTATGCTGAA+GGG | + | chr3.2:85554673-85554692 | None:intergenic | 35.0% | |
| TATCACAAGGTCAGACATAT+TGG | + | chr3.2:85559015-85559034 | None:intergenic | 35.0% | |
| TCAAATACAAAAATGCGTCC+TGG | - | chr3.2:85555392-85555411 | MS.gene015076:intron | 35.0% | |
| TGTAAACAGGAAAAAAGGGA+AGG | + | chr3.2:85558064-85558083 | None:intergenic | 35.0% | |
| TGTAAATTGATTGTAGGTGG+TGG | - | chr3.2:85554217-85554236 | MS.gene015076:intron | 35.0% | |
| TGTTATGTATTGTCGAAAGG+AGG | - | chr3.2:85555029-85555048 | MS.gene015076:CDS | 35.0% | |
| TTAGACATTACGAGTTCAAG+CGG | - | chr3.2:85555747-85555766 | MS.gene015076:intron | 35.0% | |
| TTATGACATACTGGGAACTT+AGG | - | chr3.2:85554974-85554993 | MS.gene015076:intron | 35.0% | |
| TTCCAACATACTCATTTGTG+TGG | - | chr3.2:85554422-85554441 | MS.gene015076:intron | 35.0% | |
| ! | ATCTCTTCTCTGAAAGTCAT+AGG | - | chr3.2:85556287-85556306 | MS.gene015076:intron | 35.0% |
| ! | ATCTTGTTGATTAAACCAGC+AGG | + | chr3.2:85557848-85557867 | None:intergenic | 35.0% |
| ! | ATTCTAAAAACTTTAGGGGG+TGG | + | chr3.2:85554618-85554637 | None:intergenic | 35.0% |
| ! | GCAAAACTATTTTACACCGT+TGG | - | chr3.2:85558635-85558654 | MS.gene015076:intron | 35.0% |
| ! | GGTCTTTACTAGTCTAAACT+TGG | + | chr3.2:85554491-85554510 | None:intergenic | 35.0% |
| ! | TGATTTTATGCGATTAGCGA+AGG | + | chr3.2:85553539-85553558 | None:intergenic | 35.0% |
| ! | TTTTCCTGCTCTGTTATAAG+TGG | - | chr3.2:85557901-85557920 | MS.gene015076:intron | 35.0% |
| !! | ATCATACATTGATTCCTGAC+GGG | - | chr3.2:85556715-85556734 | MS.gene015076:intron | 35.0% |
| !! | CGTATGAGTTGATTAGAGAA+GGG | + | chr3.2:85558020-85558039 | None:intergenic | 35.0% |
| !! | GATACTGGTTTATTCATCAC+TGG | - | chr3.2:85553829-85553848 | MS.gene015076:intron | 35.0% |
| !! | GGACCCTAAAAATTTTAACC+TGG | - | chr3.2:85556322-85556341 | MS.gene015076:intron | 35.0% |
| !! | TACTGGTTGTTATTTCATCC+TGG | + | chr3.2:85558689-85558708 | None:intergenic | 35.0% |
| !! | TGATGGTGCAATACGTTTTT+GGG | - | chr3.2:85555144-85555163 | MS.gene015076:CDS | 35.0% |
| !! | TGTCTCTAACACTAGTTCTA+CGG | + | chr3.2:85554154-85554173 | None:intergenic | 35.0% |
| !!! | CAATACGTTTTTGGGACATA+AGG | - | chr3.2:85555152-85555171 | MS.gene015076:CDS | 35.0% |
| AAATCAGTAGGTTGTTGTGG+CGG | + | chr3.2:85558399-85558418 | None:intergenic | 40.0% | |
| AAGAAAGTTGCCAATGGAAG+TGG | - | chr3.2:85555419-85555438 | MS.gene015076:intron | 40.0% | |
| AAGGTCAATTGCCGATGAAA+TGG | - | chr3.2:85558931-85558950 | MS.gene015076:CDS | 40.0% | |
| AATGGTCTGCTTCAAGTGAA+TGG | - | chr3.2:85555101-85555120 | MS.gene015076:CDS | 40.0% | |
| ACAAGGTCAGACATATTGGA+AGG | + | chr3.2:85559011-85559030 | None:intergenic | 40.0% | |
| ACAGAGGGCAGATAAGTATT+AGG | - | chr3.2:85556956-85556975 | MS.gene015076:intron | 40.0% | |
| ACTGTGTCTATATGGTTTCC+AGG | + | chr3.2:85556343-85556362 | None:intergenic | 40.0% | |
| AGAAGAAATACATCAGGGTG+AGG | - | chr3.2:85556461-85556480 | MS.gene015076:intron | 40.0% | |
| AGACTCGCAAATTACGAACA+AGG | + | chr3.2:85555287-85555306 | None:intergenic | 40.0% | |
| AGTGAATGGGTCTTGATTAC+CGG | - | chr3.2:85555115-85555134 | MS.gene015076:CDS | 40.0% | |
| ATGAGACACTGTGCTAACAT+GGG | + | chr3.2:85555639-85555658 | None:intergenic | 40.0% | |
| ATGAGGGTTGTGAAAGTAAG+TGG | - | chr3.2:85557526-85557545 | MS.gene015076:intron | 40.0% | |
| ATGCATTGCAGATTGACAGA+AGG | + | chr3.2:85555938-85555957 | None:intergenic | 40.0% | |
| ATGCGATTAGCGAAGGAATT+TGG | + | chr3.2:85553532-85553551 | None:intergenic | 40.0% | |
| ATGGTCTGCTTCAAGTGAAT+GGG | - | chr3.2:85555102-85555121 | MS.gene015076:CDS | 40.0% | |
| ATTAATTGCGCCTTTGTGAG+GGG | + | chr3.2:85553608-85553627 | None:intergenic | 40.0% | |
| CATGCATGGAACAAAAACGA+CGG | + | chr3.2:85557509-85557528 | None:intergenic | 40.0% | |
| CCTGTGAGTAATAAGGCTTT+AGG | + | chr3.2:85555370-85555389 | None:intergenic | 40.0% | |
| CGTCTTTGTGATATTGCTTC+TGG | - | chr3.2:85554338-85554357 | MS.gene015076:intron | 40.0% | |
| CTAGACATAAAGCATGGTCT+TGG | - | chr3.2:85556216-85556235 | MS.gene015076:intron | 40.0% | |
| GAATTAATTGCGCCTTTGTG+AGG | + | chr3.2:85553610-85553629 | None:intergenic | 40.0% | |
| GACAGGATTGAAAGTAACAG+AGG | - | chr3.2:85555553-85555572 | MS.gene015076:intron | 40.0% | |
| GACCACACAAATGAGTATGT+TGG | + | chr3.2:85554427-85554446 | None:intergenic | 40.0% | |
| GACGATTCACTGTGTCTATA+TGG | + | chr3.2:85556351-85556370 | None:intergenic | 40.0% | |
| GCAGATACATTCATCAAAGG+TGG | + | chr3.2:85554053-85554072 | None:intergenic | 40.0% | |
| GCATTTGCTCATACTTTGTC+TGG | - | chr3.2:85554362-85554381 | MS.gene015076:intron | 40.0% | |
| GGATTGAAAGTAACAGAGGA+TGG | - | chr3.2:85555557-85555576 | MS.gene015076:intron | 40.0% | |
| GTAGAATCTGTTTGGTTGTC+AGG | - | chr3.2:85557935-85557954 | MS.gene015076:intron | 40.0% | |
| GTGAAACTGTGTTTCGTAAG+TGG | - | chr3.2:85554564-85554583 | MS.gene015076:intron | 40.0% | |
| GTGGTGAATTTCAAAATGCC+TGG | - | chr3.2:85554236-85554255 | MS.gene015076:intron | 40.0% | |
| GTTATAAGTGGTCCGTCAAA+TGG | - | chr3.2:85557913-85557932 | MS.gene015076:intron | 40.0% | |
| GTTTAATGGCTATGCACCAA+CGG | + | chr3.2:85558654-85558673 | None:intergenic | 40.0% | |
| TAATCAACTCATACGGCGTA+TGG | - | chr3.2:85558025-85558044 | MS.gene015076:intron | 40.0% | |
| TATACGAACCAGCAACATGT+AGG | - | chr3.2:85554693-85554712 | MS.gene015076:intron | 40.0% | |
| TATGAGACACTGTGCTAACA+TGG | + | chr3.2:85555640-85555659 | None:intergenic | 40.0% | |
| TCCAGGAATGATTTCTACTC+AGG | - | chr3.2:85555502-85555521 | MS.gene015076:intron | 40.0% | |
| TCCTGAGTAGAAATCATTCC+TGG | + | chr3.2:85555506-85555525 | None:intergenic | 40.0% | |
| TCTATCTAGTCACCTATCAG+TGG | + | chr3.2:85554948-85554967 | None:intergenic | 40.0% | |
| TGACCTTGTGATAAACTGCA+GGG | - | chr3.2:85559022-85559041 | MS.gene015076:CDS | 40.0% | |
| TGATGTTCTGTCTGATGACA+GGG | - | chr3.2:85557365-85557384 | MS.gene015076:CDS | 40.0% | |
| TGGAAATCGTCCTTAGAACT+GGG | - | chr3.2:85554584-85554603 | MS.gene015076:intron | 40.0% | |
| TTAGCACAGTGTCTCATACA+AGG | - | chr3.2:85555642-85555661 | MS.gene015076:intron | 40.0% | |
| TTAGTTACTTAGCGGTTGAG+GGG | + | chr3.2:85557712-85557731 | None:intergenic | 40.0% | |
| TTGATGTTCTGTCTGATGAC+AGG | - | chr3.2:85557364-85557383 | MS.gene015076:CDS | 40.0% | |
| ! | CAAAGAGTGCACCATTTCAT+CGG | + | chr3.2:85558945-85558964 | None:intergenic | 40.0% |
| ! | CATGGGTCTATTGACTAGTA+TGG | + | chr3.2:85555622-85555641 | None:intergenic | 40.0% |
| ! | CGTTTTTGTTCCATGCATGA+GGG | - | chr3.2:85557510-85557529 | MS.gene015076:intron | 40.0% |
| ! | GGAATTTGGACGCAATTTTC+CGG | + | chr3.2:85553518-85553537 | None:intergenic | 40.0% |
| ! | TAGGTTTGCTTGTTTGCAAG+CGG | + | chr3.2:85557459-85557478 | None:intergenic | 40.0% |
| !! | ATTATTACCGGTGTCATGTC+CGG | - | chr3.2:85556071-85556090 | MS.gene015076:intron | 40.0% |
| !! | CCGTATGAGTTGATTAGAGA+AGG | + | chr3.2:85558021-85558040 | None:intergenic | 40.0% |
| !! | CCTAAAGCCTTATTACTCAC+AGG | - | chr3.2:85555367-85555386 | MS.gene015076:intron | 40.0% |
| !! | GTGATGGTGCAATACGTTTT+TGG | - | chr3.2:85555143-85555162 | MS.gene015076:CDS | 40.0% |
| !! | TCATACATTGATTCCTGACG+GGG | - | chr3.2:85556716-85556735 | MS.gene015076:intron | 40.0% |
| !! | TCGTTTTTGTTCCATGCATG+AGG | - | chr3.2:85557509-85557528 | MS.gene015076:intron | 40.0% |
| AACTGGCAGGCTATCATCTA+AGG | - | chr3.2:85555457-85555476 | MS.gene015076:intron | 45.0% | |
| AATCAATCTCAGACGCAGCT+TGG | - | chr3.2:85555199-85555218 | MS.gene015076:intron | 45.0% | |
| ACTGGCAGGCTATCATCTAA+GGG | - | chr3.2:85555458-85555477 | MS.gene015076:intron | 45.0% | |
| ACTTTCACAACCCTCATGCA+TGG | + | chr3.2:85557523-85557542 | None:intergenic | 45.0% | |
| AGATTGTGGGATGTTGAGTC+AGG | - | chr3.2:85557403-85557422 | MS.gene015076:CDS | 45.0% | |
| AGCGCCGTTATGTTAAGCAT+TGG | + | chr3.2:85554863-85554882 | None:intergenic | 45.0% | |
| AGGAACACTGATCTCACTTC+TGG | - | chr3.2:85557749-85557768 | MS.gene015076:intron | 45.0% | |
| AGTCTTGCACTCAATGGAAC+TGG | - | chr3.2:85556588-85556607 | MS.gene015076:intron | 45.0% | |
| ATCTAGTCACCTATCAGTGG+TGG | + | chr3.2:85554945-85554964 | None:intergenic | 45.0% | |
| ATCTGTTTGGTTGTCAGGTC+TGG | - | chr3.2:85557940-85557959 | MS.gene015076:intron | 45.0% | |
| CAAACGTTCCGTGCTAACTA+AGG | - | chr3.2:85555240-85555259 | MS.gene015076:intron | 45.0% | |
| CAACATGTAGGTTTGAGTGC+CGG | - | chr3.2:85554705-85554724 | MS.gene015076:CDS | 45.0% | |
| CACAACAGTCTTGCACTCAA+TGG | - | chr3.2:85556582-85556601 | MS.gene015076:intron | 45.0% | |
| CACTCAAACCTACATGTTGC+TGG | + | chr3.2:85554704-85554723 | None:intergenic | 45.0% | |
| CATACTTTGTCTGGTCATCG+TGG | - | chr3.2:85554371-85554390 | MS.gene015076:intron | 45.0% | |
| CTGACCTTGTGATAAACTGC+AGG | - | chr3.2:85559021-85559040 | MS.gene015076:CDS | 45.0% | |
| GAAATCGTCCTTAGAACTGG+GGG | - | chr3.2:85554586-85554605 | MS.gene015076:intron | 45.0% | |
| GATCAGGTATGTTCAACAGC+TGG | - | chr3.2:85557865-85557884 | MS.gene015076:intron | 45.0% | |
| GATCGTGCAACTGCTCATTA+TGG | - | chr3.2:85555524-85555543 | MS.gene015076:intron | 45.0% | |
| GCTCATCTCAGACCATTGAT+CGG | + | chr3.2:85558361-85558380 | None:intergenic | 45.0% | |
| GGAAATCGTCCTTAGAACTG+GGG | - | chr3.2:85554585-85554604 | MS.gene015076:intron | 45.0% | |
| GGACAGAAGAAAGTTGCCAA+TGG | - | chr3.2:85555413-85555432 | MS.gene015076:intron | 45.0% | |
| GGCATGTATCTCTTAAGTGC+AGG | - | chr3.2:85555578-85555597 | MS.gene015076:intron | 45.0% | |
| GTGAATGGGTCTTGATTACC+GGG | - | chr3.2:85555116-85555135 | MS.gene015076:CDS | 45.0% | |
| GTGGAAATCGTCCTTAGAAC+TGG | - | chr3.2:85554583-85554602 | MS.gene015076:intron | 45.0% | |
| TCTCATACGCTTATTGCTGC+TGG | - | chr3.2:85554296-85554315 | MS.gene015076:intron | 45.0% | |
| TGAATGGGTCTTGATTACCG+GGG | - | chr3.2:85555117-85555136 | MS.gene015076:CDS | 45.0% | |
| TTAGATGATAGCCTGCCAGT+TGG | + | chr3.2:85555458-85555477 | None:intergenic | 45.0% | |
| TTCTTGTATGGTCACCTGCA+AGG | - | chr3.2:85558912-85558931 | MS.gene015076:CDS | 45.0% | |
| TTGGCAACTTTCTTCTGTCC+AGG | + | chr3.2:85555413-85555432 | None:intergenic | 45.0% | |
| ! | CAGTAAAGCAGCATTAGCCT+TGG | - | chr3.2:85558704-85558723 | MS.gene015076:CDS | 45.0% |
| ! | GCAGTCTTATACACCTTTCC+AGG | + | chr3.2:85554257-85554276 | None:intergenic | 45.0% |
| !! | AACATGTGTCGGTGTTGTGT+CGG | + | chr3.2:85556023-85556042 | None:intergenic | 45.0% |
| !! | AGCAGCATTAGCCTTGGATA+TGG | - | chr3.2:85558710-85558729 | MS.gene015076:CDS | 45.0% |
| !! | ATACATTGATTCCTGACGGG+GGG | - | chr3.2:85556718-85556737 | MS.gene015076:intron | 45.0% |
| !! | CAAGGCTAATGCTGCTTTAC+TGG | + | chr3.2:85558706-85558725 | None:intergenic | 45.0% |
| !! | CATACATTGATTCCTGACGG+GGG | - | chr3.2:85556717-85556736 | MS.gene015076:intron | 45.0% |
| !! | TATTATACAATAATATATTA+TGG | - | chr3.2:85557237-85557256 | MS.gene015076:intron | 5.0% |
| AACGCACGTACGATACTACG+TGG | - | chr3.2:85557802-85557821 | MS.gene015076:intron | 50.0% | |
| AATGGGTCTTGATTACCGGG+GGG | - | chr3.2:85555119-85555138 | MS.gene015076:CDS | 50.0% | |
| ACAAACACCGGACATGACAC+CGG | + | chr3.2:85556081-85556100 | None:intergenic | 50.0% | |
| ACGGAACGTTTGAGTAGAGG+TGG | + | chr3.2:85555232-85555251 | None:intergenic | 50.0% | |
| AGCACGGAACGTTTGAGTAG+AGG | + | chr3.2:85555235-85555254 | None:intergenic | 50.0% | |
| ATCAGGGTGAGGTAGAGAAG+TGG | - | chr3.2:85556472-85556491 | MS.gene015076:intron | 50.0% | |
| CAGTGCTTCATAGTGCCTTC+AGG | - | chr3.2:85556107-85556126 | MS.gene015076:intron | 50.0% | |
| CGGAACGTTTGAGTAGAGGT+GGG | + | chr3.2:85555231-85555250 | None:intergenic | 50.0% | |
| CGGACCACTTATAACAGAGC+AGG | + | chr3.2:85557908-85557927 | None:intergenic | 50.0% | |
| GAACTCGTTTCCCCTCACAA+AGG | - | chr3.2:85553595-85553614 | MS.gene015076:intron | 50.0% | |
| GAATGGGTCTTGATTACCGG+GGG | - | chr3.2:85555118-85555137 | MS.gene015076:CDS | 50.0% | |
| GCACTCAATGGAACTGGCTA+AGG | - | chr3.2:85556594-85556613 | MS.gene015076:intron | 50.0% | |
| GCTTATTGCTGCTGGAACTG+AGG | - | chr3.2:85554304-85554323 | MS.gene015076:intron | 50.0% | |
| GTGAACGTCGTAAACCGCTA+CGG | + | chr3.2:85553689-85553708 | None:intergenic | 50.0% | |
| TAGCGGTTTACGACGTTCAC+CGG | - | chr3.2:85553689-85553708 | MS.gene015076:intron | 50.0% | |
| TCATCGGCAATTGACCTTGC+AGG | + | chr3.2:85558929-85558948 | None:intergenic | 50.0% | |
| TCGCCCTGCAGTTTATCACA+AGG | + | chr3.2:85559028-85559047 | None:intergenic | 50.0% | |
| TGTCAAGCTCCACCACTGAT+AGG | - | chr3.2:85554933-85554952 | MS.gene015076:intron | 50.0% | |
| TGTGATAAACTGCAGGGCGA+AGG | - | chr3.2:85559028-85559047 | MS.gene015076:CDS | 50.0% | |
| TTGCCACAGGAGTTGTACAC+AGG | - | chr3.2:85558872-85558891 | MS.gene015076:CDS | 50.0% | |
| TTGGGACACTAACACCACTC+AGG | - | chr3.2:85553876-85553895 | MS.gene015076:intron | 50.0% | |
| TTTGACGGGACTGCAACAGA+GGG | - | chr3.2:85556941-85556960 | MS.gene015076:intron | 50.0% | |
| ! | AGCATTGGATGTTGGCACAG+TGG | + | chr3.2:85554848-85554867 | None:intergenic | 50.0% |
| ! | ATGTCCACTGCCACTTCCAT+TGG | + | chr3.2:85555432-85555451 | None:intergenic | 50.0% |
| ! | GCACTGGCATACACAAACAC+CGG | + | chr3.2:85556093-85556112 | None:intergenic | 50.0% |
| ! | TTTTGACGGGACTGCAACAG+AGG | - | chr3.2:85556940-85556959 | MS.gene015076:intron | 50.0% |
| !! | CTGAAGGCACTATGAAGCAC+TGG | + | chr3.2:85556109-85556128 | None:intergenic | 50.0% |
| !! | CTGTTTGGTTTGTCAGGTCC+GGG | - | chr3.2:85557963-85557982 | MS.gene015076:intron | 50.0% |
| !! | GCTCATTATGGTGCTGTGAC+AGG | - | chr3.2:85555536-85555555 | MS.gene015076:intron | 50.0% |
| !! | GCTGTTTGGTTTGTCAGGTC+CGG | - | chr3.2:85557962-85557981 | MS.gene015076:intron | 50.0% |
| !! | GTCTGGCTGTTTGGTTTGTC+AGG | - | chr3.2:85557957-85557976 | MS.gene015076:intron | 50.0% |
| !!! | TTTTGGGACATAAGGCGTGC+TGG | - | chr3.2:85555160-85555179 | MS.gene015076:CDS | 50.0% |
| ACTCCAGCTATCCTGGTCGT+CGG | + | chr3.2:85559059-85559078 | None:intergenic | 55.0% | |
| AGCGGTTGAGGGGTGGAATT+GGG | + | chr3.2:85557702-85557721 | None:intergenic | 55.0% | |
| CCACAGGAGTTGTACACAGG+TGG | - | chr3.2:85558875-85558894 | MS.gene015076:CDS | 55.0% | |
| CCACCTGTGTACAACTCCTG+TGG | + | chr3.2:85558878-85558897 | None:intergenic | 55.0% | |
| CCATCTCCGTCGAAATCGCT+CGG | + | chr3.2:85553715-85553734 | None:intergenic | 55.0% | |
| GGTTGTCAGGTCTGGCTGTT+TGG | - | chr3.2:85557948-85557967 | MS.gene015076:intron | 55.0% | |
| GTTACTTAGCGGTTGAGGGG+TGG | + | chr3.2:85557709-85557728 | None:intergenic | 55.0% | |
| GTTGCCAATGGAAGTGGCAG+TGG | - | chr3.2:85555425-85555444 | MS.gene015076:intron | 55.0% | |
| TAGCGGTTGAGGGGTGGAAT+TGG | + | chr3.2:85557703-85557722 | None:intergenic | 55.0% | |
| TAGGTTGTTGTGGCGGTGGT+GGG | + | chr3.2:85558392-85558411 | None:intergenic | 55.0% | |
| TATTGCACCATCACACCCCC+CGG | + | chr3.2:85555137-85555156 | None:intergenic | 55.0% | |
| TCAGTAGGTTGTTGTGGCGG+TGG | + | chr3.2:85558396-85558415 | None:intergenic | 55.0% | |
| TGCGTCAGATGCATCCGTAG+CGG | - | chr3.2:85553672-85553691 | MS.gene015076:intron | 55.0% | |
| TTGATTCCTGACGGGGGGAA+GGG | - | chr3.2:85556723-85556742 | MS.gene015076:intron | 55.0% | |
| ! | AAGAGGCAGCGAGCTTTGAC+TGG | - | chr3.2:85557060-85557079 | MS.gene015076:CDS | 55.0% |
| ! | ATTGATTCCTGACGGGGGGA+AGG | - | chr3.2:85556722-85556741 | MS.gene015076:intron | 55.0% |
| ! | TTGATTACCGGGGGGTGTGA+TGG | - | chr3.2:85555127-85555146 | MS.gene015076:CDS | 55.0% |
| AGGTTGTTGTGGCGGTGGTG+GGG | + | chr3.2:85558391-85558410 | None:intergenic | 60.0% | |
| ATCCCGACGACCAGGATAGC+TGG | - | chr3.2:85559053-85559072 | MS.gene015076:CDS | 60.0% | |
| CCGAGCGATTTCGACGGAGA+TGG | - | chr3.2:85553712-85553731 | MS.gene015076:intron | 60.0% | |
| CTCCAGCTATCCTGGTCGTC+GGG | + | chr3.2:85559058-85559077 | None:intergenic | 60.0% | |
| GGCAGTGGACATCTGCCAAC+TGG | - | chr3.2:85555440-85555459 | MS.gene015076:intron | 60.0% | |
| GGCATGCACCCCCAGTTCTA+AGG | + | chr3.2:85554597-85554616 | None:intergenic | 60.0% | |
| GTAGGTTGTTGTGGCGGTGG+TGG | + | chr3.2:85558393-85558412 | None:intergenic | 60.0% | |
| GTGGACATCTGCCAACTGGC+AGG | - | chr3.2:85555444-85555463 | MS.gene015076:intron | 60.0% | |
| CACCGGCCGAGCGATTTCGA+CGG | - | chr3.2:85553706-85553725 | MS.gene015076:intron | 65.0% | |
| CGAAGGAGATCCCGACGACC+AGG | - | chr3.2:85559045-85559064 | MS.gene015076:CDS | 65.0% | |
| CTCCGTCGAAATCGCTCGGC+CGG | + | chr3.2:85553711-85553730 | None:intergenic | 65.0% | |
| CTTCAACCCTTCCCCCCGTC+AGG | + | chr3.2:85556732-85556751 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 85553481 | 85559084 | 85553481 | ID=MS.gene015076 |
| chr3.2 | mRNA | 85553481 | 85559084 | 85553481 | ID=MS.gene015076.t1;Parent=MS.gene015076 |
| chr3.2 | exon | 85558668 | 85559084 | 85558668 | ID=MS.gene015076.t1.exon1;Parent=MS.gene015076.t1 |
| chr3.2 | CDS | 85558668 | 85559084 | 85558668 | ID=cds.MS.gene015076.t1;Parent=MS.gene015076.t1 |
| chr3.2 | exon | 85558173 | 85558332 | 85558173 | ID=MS.gene015076.t1.exon2;Parent=MS.gene015076.t1 |
| chr3.2 | CDS | 85558173 | 85558332 | 85558173 | ID=cds.MS.gene015076.t1;Parent=MS.gene015076.t1 |
| chr3.2 | exon | 85557304 | 85557482 | 85557304 | ID=MS.gene015076.t1.exon3;Parent=MS.gene015076.t1 |
| chr3.2 | CDS | 85557304 | 85557482 | 85557304 | ID=cds.MS.gene015076.t1;Parent=MS.gene015076.t1 |
| chr3.2 | exon | 85556966 | 85557176 | 85556966 | ID=MS.gene015076.t1.exon4;Parent=MS.gene015076.t1 |
| chr3.2 | CDS | 85556966 | 85557176 | 85556966 | ID=cds.MS.gene015076.t1;Parent=MS.gene015076.t1 |
| chr3.2 | exon | 85555025 | 85555179 | 85555025 | ID=MS.gene015076.t1.exon5;Parent=MS.gene015076.t1 |
| chr3.2 | CDS | 85555025 | 85555179 | 85555025 | ID=cds.MS.gene015076.t1;Parent=MS.gene015076.t1 |
| chr3.2 | exon | 85554695 | 85554784 | 85554695 | ID=MS.gene015076.t1.exon6;Parent=MS.gene015076.t1 |
| chr3.2 | CDS | 85554695 | 85554784 | 85554695 | ID=cds.MS.gene015076.t1;Parent=MS.gene015076.t1 |
| chr3.2 | exon | 85553613 | 85553684 | 85553613 | ID=MS.gene015076.t1.exon7;Parent=MS.gene015076.t1 |
| chr3.2 | CDS | 85553613 | 85553684 | 85553613 | ID=cds.MS.gene015076.t1;Parent=MS.gene015076.t1 |
| chr3.2 | exon | 85553481 | 85553522 | 85553481 | ID=MS.gene015076.t1.exon8;Parent=MS.gene015076.t1 |
| chr3.2 | CDS | 85553481 | 85553522 | 85553481 | ID=cds.MS.gene015076.t1;Parent=MS.gene015076.t1 |
| Gene Sequence |
| Protein sequence |
