Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37481.t1 | XP_013461789.1 | 98.6 | 441 | 6 | 0 | 1 | 441 | 1 | 441 | 6.70E-255 | 889.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37481.t1 | Q93ZG3 | 65.5 | 449 | 144 | 2 | 4 | 441 | 2 | 450 | 2.0e-175 | 616.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37481.t1 | A0A072V1E5 | 98.6 | 441 | 6 | 0 | 1 | 441 | 1 | 441 | 4.8e-255 | 889.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049435 | MS.gene37481 | 0.815946 | 7.12E-52 | -1.69E-46 |
| MS.gene049586 | MS.gene37481 | 0.802863 | 4.58E-49 | -1.69E-46 |
| MS.gene049669 | MS.gene37481 | 0.806284 | 8.87E-50 | -1.69E-46 |
| MS.gene050105 | MS.gene37481 | 0.801099 | 1.06E-48 | -1.69E-46 |
| MS.gene050442 | MS.gene37481 | 0.828341 | 9.49E-55 | -1.69E-46 |
| MS.gene051147 | MS.gene37481 | 0.815642 | 8.33E-52 | -1.69E-46 |
| MS.gene051190 | MS.gene37481 | 0.842802 | 2.07E-58 | -1.69E-46 |
| MS.gene052190 | MS.gene37481 | 0.817908 | 2.58E-52 | -1.69E-46 |
| MS.gene052333 | MS.gene37481 | 0.879694 | 1.01E-69 | -1.69E-46 |
| MS.gene052389 | MS.gene37481 | 0.813105 | 3.03E-51 | -1.69E-46 |
| MS.gene052586 | MS.gene37481 | 0.811059 | 8.46E-51 | -1.69E-46 |
| MS.gene052637 | MS.gene37481 | 0.80111 | 1.05E-48 | -1.69E-46 |
| MS.gene052674 | MS.gene37481 | 0.813924 | 2.00E-51 | -1.69E-46 |
| MS.gene052675 | MS.gene37481 | 0.816626 | 5.02E-52 | -1.69E-46 |
| MS.gene052677 | MS.gene37481 | 0.822913 | 1.84E-53 | -1.69E-46 |
| MS.gene053147 | MS.gene37481 | 0.848952 | 4.41E-60 | -1.69E-46 |
| MS.gene053166 | MS.gene37481 | 0.813963 | 1.96E-51 | -1.69E-46 |
| MS.gene053647 | MS.gene37481 | 0.806556 | 7.77E-50 | -1.69E-46 |
| MS.gene054093 | MS.gene37481 | 0.80278 | 4.77E-49 | -1.69E-46 |
| MS.gene05414 | MS.gene37481 | 0.819771 | 9.75E-53 | -1.69E-46 |
| MS.gene05415 | MS.gene37481 | 0.827583 | 1.44E-54 | -1.69E-46 |
| MS.gene054291 | MS.gene37481 | -0.880746 | 4.26E-70 | -1.69E-46 |
| MS.gene054467 | MS.gene37481 | 0.830828 | 2.36E-55 | -1.69E-46 |
| MS.gene054468 | MS.gene37481 | 0.864053 | 1.60E-64 | -1.69E-46 |
| MS.gene054559 | MS.gene37481 | 0.801758 | 7.74E-49 | -1.69E-46 |
| MS.gene054576 | MS.gene37481 | 0.807758 | 4.32E-50 | -1.69E-46 |
| MS.gene054581 | MS.gene37481 | 0.845089 | 5.05E-59 | -1.69E-46 |
| MS.gene055166 | MS.gene37481 | 0.810308 | 1.23E-50 | -1.69E-46 |
| MS.gene055225 | MS.gene37481 | 0.807696 | 4.46E-50 | -1.69E-46 |
| MS.gene055356 | MS.gene37481 | 0.810659 | 1.03E-50 | -1.69E-46 |
| MS.gene055358 | MS.gene37481 | 0.802409 | 5.69E-49 | -1.69E-46 |
| MS.gene055455 | MS.gene37481 | -0.815143 | 1.08E-51 | -1.69E-46 |
| MS.gene055701 | MS.gene37481 | 0.821893 | 3.17E-53 | -1.69E-46 |
| MS.gene05595 | MS.gene37481 | 0.818668 | 1.74E-52 | -1.69E-46 |
| MS.gene05604 | MS.gene37481 | 0.806305 | 8.77E-50 | -1.69E-46 |
| MS.gene056162 | MS.gene37481 | 0.80041 | 1.46E-48 | -1.69E-46 |
| MS.gene056506 | MS.gene37481 | 0.83723 | 5.87E-57 | -1.69E-46 |
| MS.gene056779 | MS.gene37481 | 0.82687 | 2.14E-54 | -1.69E-46 |
| MS.gene057012 | MS.gene37481 | 0.832928 | 7.15E-56 | -1.69E-46 |
| MS.gene057026 | MS.gene37481 | 0.835499 | 1.62E-56 | -1.69E-46 |
| MS.gene057156 | MS.gene37481 | -0.826738 | 2.30E-54 | -1.69E-46 |
| MS.gene058935 | MS.gene37481 | 0.809954 | 1.47E-50 | -1.69E-46 |
| MS.gene058979 | MS.gene37481 | 0.802769 | 4.79E-49 | -1.69E-46 |
| MS.gene059161 | MS.gene37481 | 0.813504 | 2.48E-51 | -1.69E-46 |
| MS.gene060011 | MS.gene37481 | 0.806094 | 9.72E-50 | -1.69E-46 |
| MS.gene060271 | MS.gene37481 | 0.801235 | 9.91E-49 | -1.69E-46 |
| MS.gene060373 | MS.gene37481 | 0.828583 | 8.29E-55 | -1.69E-46 |
| MS.gene06052 | MS.gene37481 | 0.814105 | 1.82E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene89575 | MS.gene37481 | PPI |
| MS.gene32874 | MS.gene37481 | PPI |
| MS.gene012871 | MS.gene37481 | PPI |
| MS.gene038078 | MS.gene37481 | PPI |
| MS.gene036055 | MS.gene37481 | PPI |
| MS.gene015076 | MS.gene37481 | PPI |
| MS.gene23970 | MS.gene37481 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37481.t1 | MTR_3g103170 | 98.639 | 441 | 6 | 0 | 1 | 441 | 1 | 441 | 0.0 | 910 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37481.t1 | AT1G27840 | 65.479 | 449 | 144 | 2 | 4 | 441 | 2 | 450 | 0.0 | 634 |
| MS.gene37481.t1 | AT1G27840 | 65.333 | 450 | 144 | 3 | 4 | 441 | 2 | 451 | 0.0 | 629 |
| MS.gene37481.t1 | AT1G19750 | 65.854 | 451 | 139 | 4 | 4 | 441 | 2 | 450 | 0.0 | 624 |
| MS.gene37481.t1 | AT1G27840 | 56.347 | 449 | 128 | 4 | 4 | 441 | 2 | 393 | 4.96e-180 | 508 |
| MS.gene37481.t1 | AT1G19750 | 65.672 | 335 | 100 | 4 | 120 | 441 | 1 | 333 | 3.91e-158 | 450 |
| MS.gene37481.t1 | AT2G16780 | 28.421 | 190 | 115 | 7 | 60 | 245 | 183 | 355 | 4.54e-11 | 64.7 |
| MS.gene37481.t1 | AT5G23430 | 27.481 | 131 | 92 | 2 | 99 | 229 | 10 | 137 | 7.06e-11 | 65.1 |
| MS.gene37481.t1 | AT5G23430 | 27.481 | 131 | 92 | 2 | 99 | 229 | 10 | 137 | 7.18e-11 | 65.1 |
| MS.gene37481.t1 | AT5G23430 | 27.481 | 131 | 92 | 2 | 99 | 229 | 10 | 137 | 7.18e-11 | 65.1 |
Find 94 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCGATTAGCGAAGGAATT+TGG | 0.195129 | 3.4:+90754586 | None:intergenic |
| ATGCTGTATCTTCAGCTATT+TGG | 0.204367 | 3.4:-90754318 | MS.gene37481:CDS |
| CAGCATATTTATGAGCTAAT+TGG | 0.265136 | 3.4:+90754335 | None:intergenic |
| ATGATCATCATGTTAATGTT+TGG | 0.280560 | 3.4:-90754258 | MS.gene37481:CDS |
| AACTGGCAGGCTATCATCTA+AGG | 0.289330 | 3.4:-90752657 | MS.gene37481:CDS |
| CGTCTTTGTGATATTGCTTC+TGG | 0.295957 | 3.4:-90753777 | MS.gene37481:CDS |
| GGATGTAATTTCTGCTTCAT+TGG | 0.303704 | 3.4:+90752632 | None:intergenic |
| TGATCATCATGTTAATGTTT+GGG | 0.326481 | 3.4:-90754257 | MS.gene37481:CDS |
| GCAGTCTTATACACCTTTCC+AGG | 0.331614 | 3.4:+90753861 | None:intergenic |
| ATTTGGTATCCCATTGATAC+TGG | 0.339602 | 3.4:-90754301 | MS.gene37481:CDS |
| TCATCGGCAATTGACCTTGC+AGG | 0.342730 | 3.4:+90749197 | None:intergenic |
| AGTGAATGGGTCTTGATTAC+CGG | 0.350685 | 3.4:-90752999 | MS.gene37481:CDS |
| GCATTTGCTCATACTTTGTC+TGG | 0.353584 | 3.4:-90753753 | MS.gene37481:CDS |
| GATCGTGCAACTGCTCATTA+TGG | 0.366149 | 3.4:-90752590 | MS.gene37481:CDS |
| TCTGAGATTGATTTAAAACT+TGG | 0.377456 | 3.4:+90752925 | None:intergenic |
| CAGGCATTTGATATGTGGTC+TGG | 0.378935 | 3.4:-90750339 | MS.gene37481:CDS |
| TGAGTTGTAGCTAATTGAAT+AGG | 0.379923 | 3.4:+90750642 | None:intergenic |
| TCCTGAGTAGAAATCATTCC+TGG | 0.383793 | 3.4:+90752611 | None:intergenic |
| GATGAATAAACCAGTATCAA+TGG | 0.420168 | 3.4:+90754291 | None:intergenic |
| CTTCTGTTAAATCAATTTGA+AGG | 0.421628 | 3.4:+90754485 | None:intergenic |
| CTCAGTTACTCCAGCTATCC+TGG | 0.425023 | 3.4:+90749060 | None:intergenic |
| TTGGCAACTTTCTTCTGTCC+AGG | 0.433328 | 3.4:+90752704 | None:intergenic |
| AACATCAAAGACAGAGAATC+CGG | 0.439433 | 3.4:-90754619 | MS.gene37481:CDS |
| CTGATTCAAGATTGAGATTG+TGG | 0.440434 | 3.4:-90750728 | MS.gene37481:CDS |
| CAAACGTTCCGTGCTAACTA+AGG | 0.443106 | 3.4:-90752874 | MS.gene37481:intron |
| ATCCCGACGACCAGGATAGC+TGG | 0.447196 | 3.4:-90749070 | MS.gene37481:CDS |
| AATGGTCTGCTTCAAGTGAA+TGG | 0.451347 | 3.4:-90753013 | MS.gene37481:CDS |
| GATACTGGTTTATTCATCAC+TGG | 0.452740 | 3.4:-90754286 | MS.gene37481:CDS |
| GGCAGTGGACATCTGCCAAC+TGG | 0.453300 | 3.4:-90752674 | MS.gene37481:CDS |
| CTGGTTTAATCAACAAGATC+AGG | 0.457234 | 3.4:-90750268 | MS.gene37481:intron |
| TTATTCAGGCATTTGATATG+TGG | 0.464525 | 3.4:-90750344 | MS.gene37481:intron |
| CTCCAGCTATCCTGGTCGTC+GGG | 0.468697 | 3.4:+90749068 | None:intergenic |
| TAGCGGTTTACGACGTTCAC+CGG | 0.471610 | 3.4:-90754426 | MS.gene37481:CDS |
| ACGATAGACAAATTCTTGTA+TGG | 0.472177 | 3.4:-90749223 | MS.gene37481:CDS |
| ATGAATAAACCAGTATCAAT+GGG | 0.473954 | 3.4:+90754292 | None:intergenic |
| CTTCAAATTGATTTAACAGA+AGG | 0.481429 | 3.4:-90754484 | MS.gene37481:CDS |
| CTCCGTCGAAATCGCTCGGC+CGG | 0.482142 | 3.4:+90754407 | None:intergenic |
| TTCTGTTAAATCAATTTGAA+GGG | 0.489653 | 3.4:+90754486 | None:intergenic |
| AAGAAAGTTGCCAATGGAAG+TGG | 0.491768 | 3.4:-90752695 | MS.gene37481:CDS |
| TCTCATACGCTTATTGCTGC+TGG | 0.491892 | 3.4:-90753819 | MS.gene37481:CDS |
| GTTGCCAATGGAAGTGGCAG+TGG | 0.492604 | 3.4:-90752689 | MS.gene37481:CDS |
| CAAAGAGTGCACCATTTCAT+CGG | 0.496860 | 3.4:+90749181 | None:intergenic |
| AATCAATCTCAGACGCAGCT+TGG | 0.504418 | 3.4:-90752915 | MS.gene37481:CDS |
| CCGAGCGATTTCGACGGAGA+TGG | 0.504812 | 3.4:-90754403 | MS.gene37481:CDS |
| GCTCATTATGGTGCTGTGAC+AGG | 0.504885 | 3.4:-90752578 | MS.gene37481:CDS |
| AATTAATTGCGCCTTTGTGA+GGG | 0.509005 | 3.4:+90754509 | None:intergenic |
| CGAAGGAGATCCCGACGACC+AGG | 0.513845 | 3.4:-90749078 | MS.gene37481:CDS |
| ATGGTCTGCTTCAAGTGAAT+GGG | 0.514760 | 3.4:-90753012 | MS.gene37481:CDS |
| AGGCATTTGATATGTGGTCT+GGG | 0.514949 | 3.4:-90750338 | MS.gene37481:CDS |
| AGATTGTGGGATGTTGAGTC+AGG | 0.515425 | 3.4:-90750714 | MS.gene37481:CDS |
| GTGGTGAATTTCAAAATGCC+TGG | 0.516745 | 3.4:-90753879 | MS.gene37481:CDS |
| AAGGTCAATTGCCGATGAAA+TGG | 0.525899 | 3.4:-90749192 | MS.gene37481:intron |
| GTGGACATCTGCCAACTGGC+AGG | 0.526487 | 3.4:-90752670 | MS.gene37481:CDS |
| GAATTAATTGCGCCTTTGTG+AGG | 0.526750 | 3.4:+90754508 | None:intergenic |
| ATCTTGTTGATTAAACCAGC+AGG | 0.528118 | 3.4:+90750272 | None:intergenic |
| TCCAGGAATGATTTCTACTC+AGG | 0.535159 | 3.4:-90752612 | MS.gene37481:CDS |
| ATGAATCTATAAACTCCTGC+TGG | 0.535705 | 3.4:-90750287 | MS.gene37481:CDS |
| ATGTCCACTGCCACTTCCAT+TGG | 0.540411 | 3.4:+90752685 | None:intergenic |
| GTGAATGGGTCTTGATTACC+GGG | 0.543515 | 3.4:-90752998 | MS.gene37481:CDS |
| ACTTTCACAACCCTCATGCA+TGG | 0.546812 | 3.4:+90750597 | None:intergenic |
| GGCATGTATCTCTTAAGTGC+AGG | 0.549168 | 3.4:-90752536 | MS.gene37481:intron |
| AGCACGGAACGTTTGAGTAG+AGG | 0.550967 | 3.4:+90752882 | None:intergenic |
| ACTCCAGCTATCCTGGTCGT+CGG | 0.569326 | 3.4:+90749067 | None:intergenic |
| TTCTTGTATGGTCACCTGCA+AGG | 0.573554 | 3.4:-90749211 | MS.gene37481:CDS |
| TGATTCAAGATTGAGATTGT+GGG | 0.573902 | 3.4:-90750727 | MS.gene37481:CDS |
| TAGGTTTGCTTGTTTGCAAG+CGG | 0.575957 | 3.4:+90750661 | None:intergenic |
| CCATCTCCGTCGAAATCGCT+CGG | 0.578915 | 3.4:+90754403 | None:intergenic |
| TGTGATAAACTGCAGGGCGA+AGG | 0.586427 | 3.4:-90749095 | MS.gene37481:intron |
| ATGAAGCAGAAATTACATCC+AGG | 0.589532 | 3.4:-90752629 | MS.gene37481:CDS |
| ACGGAACGTTTGAGTAGAGG+TGG | 0.594941 | 3.4:+90752885 | None:intergenic |
| TTGCCACAGGAGTTGTACAC+AGG | 0.597998 | 3.4:-90749251 | MS.gene37481:intron |
| GGATTGAAAGTAACAGAGGA+TGG | 0.605564 | 3.4:-90752557 | MS.gene37481:CDS |
| GCTTATTGCTGCTGGAACTG+AGG | 0.609754 | 3.4:-90753811 | MS.gene37481:CDS |
| ATTAATTGCGCCTTTGTGAG+GGG | 0.611011 | 3.4:+90754510 | None:intergenic |
| GGACAGAAGAAAGTTGCCAA+TGG | 0.611679 | 3.4:-90752701 | MS.gene37481:CDS |
| ATGGTGTAATGACTGTTGAA+TGG | 0.628070 | 3.4:-90753031 | MS.gene37481:CDS |
| ACTGGCAGGCTATCATCTAA+GGG | 0.630654 | 3.4:-90752656 | MS.gene37481:CDS |
| CACCGGCCGAGCGATTTCGA+CGG | 0.632724 | 3.4:-90754409 | MS.gene37481:CDS |
| GTGAACGTCGTAAACCGCTA+CGG | 0.633953 | 3.4:+90754429 | None:intergenic |
| CCACAGGAGTTGTACACAGG+TGG | 0.635650 | 3.4:-90749248 | MS.gene37481:intron |
| GAATTTCAAAATGCCTGGAA+AGG | 0.640053 | 3.4:-90753874 | MS.gene37481:CDS |
| TTAGATGATAGCCTGCCAGT+TGG | 0.643193 | 3.4:+90752659 | None:intergenic |
| GAATGGGTCTTGATTACCGG+GGG | 0.646184 | 3.4:-90752996 | MS.gene37481:CDS |
| TTGGGACACTAACACCACTC+AGG | 0.656420 | 3.4:-90754239 | MS.gene37481:intron |
| CATACTTTGTCTGGTCATCG+TGG | 0.668716 | 3.4:-90753744 | MS.gene37481:intron |
| CGGAACGTTTGAGTAGAGGT+GGG | 0.672074 | 3.4:+90752886 | None:intergenic |
| GACAGGATTGAAAGTAACAG+AGG | 0.681612 | 3.4:-90752561 | MS.gene37481:CDS |
| TGCGTCAGATGCATCCGTAG+CGG | 0.693318 | 3.4:-90754443 | MS.gene37481:CDS |
| ATGCTCCGAATATGGATACG+TGG | 0.705582 | 3.4:-90754645 | None:intergenic |
| GAACTCGTTTCCCCTCACAA+AGG | 0.708363 | 3.4:-90754520 | MS.gene37481:CDS |
| AACGCACGTACGATACTACG+TGG | 0.751494 | 3.4:-90750315 | MS.gene37481:CDS |
| TGAATGGGTCTTGATTACCG+GGG | 0.757650 | 3.4:-90752997 | MS.gene37481:CDS |
| AAGATTGAATAGAACCTGAG+TGG | 0.761909 | 3.4:+90754225 | None:intergenic |
| AATGGGTCTTGATTACCGGG+GGG | 0.785902 | 3.4:-90752995 | MS.gene37481:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATTAATTTACAGTTA+AGG | + | chr3.4:90752502-90752521 | None:intergenic | 10.0% |
| !! | ATTTAAATTAGAATCAATTA+CGG | + | chr3.4:90749598-90749617 | None:intergenic | 10.0% |
| !!! | AACTAAATTTTACAATAAAA+AGG | - | chr3.4:90753857-90753876 | MS.gene37481:CDS | 10.0% |
| !!! | TTTTTTTTTTATATCTCATT+TGG | + | chr3.4:90752134-90752153 | None:intergenic | 10.0% |
| !! | AAGGAAAAAAAAAAAAATAG+TGG | - | chr3.4:90750111-90750130 | MS.gene37481:intron | 15.0% |
| !! | AGGAAAAAAAAAAAAATAGT+GGG | - | chr3.4:90750112-90750131 | MS.gene37481:intron | 15.0% |
| !! | AGGTTAAATCATATTTATAT+AGG | + | chr3.4:90752225-90752244 | None:intergenic | 15.0% |
| !! | GGTTAAATCATATTTATATA+GGG | + | chr3.4:90752224-90752243 | None:intergenic | 15.0% |
| !! | TAACTTAAATTCAAGTATTT+AGG | - | chr3.4:90750914-90750933 | MS.gene37481:intron | 15.0% |
| !! | TATTATATTTAACAAAAGCT+TGG | - | chr3.4:90752246-90752265 | MS.gene37481:intron | 15.0% |
| !!! | ACTGTAAATTAATATTTTGA+CGG | - | chr3.4:90752504-90752523 | MS.gene37481:intron | 15.0% |
| !!! | ATACTATTCTAAAAACTTTA+GGG | + | chr3.4:90750204-90750223 | None:intergenic | 15.0% |
| !!! | ATTTTAGTTAGAATCAATAT+TGG | - | chr3.4:90749676-90749695 | MS.gene37481:intron | 15.0% |
| !!! | GCTTTTGTTAAATATAATAT+AGG | + | chr3.4:90752245-90752264 | None:intergenic | 15.0% |
| !!! | TAAAGGTTTTTTTTTAACAA+CGG | + | chr3.4:90753168-90753187 | None:intergenic | 15.0% |
| !!! | TATACTATTCTAAAAACTTT+AGG | + | chr3.4:90750205-90750224 | None:intergenic | 15.0% |
| !!! | TCTATAAACATTTTTAATGA+TGG | - | chr3.4:90753834-90753853 | MS.gene37481:CDS | 15.0% |
| !! | AAAAAAGTAGAAGCAATTTA+TGG | - | chr3.4:90753890-90753909 | MS.gene37481:intron | 20.0% |
| !! | AAAATGTAAACAGGAAAAAA+GGG | + | chr3.4:90753640-90753659 | None:intergenic | 20.0% |
| !! | AACTAATTATATTGAGCAAA+AGG | + | chr3.4:90751827-90751846 | None:intergenic | 20.0% |
| !! | ACCATAAATTCTATTCTTAT+TGG | + | chr3.4:90754117-90754136 | None:intergenic | 20.0% |
| !! | GGAATAAATTATGAGTTTAA+TGG | + | chr3.4:90754240-90754259 | None:intergenic | 20.0% |
| !! | GTTTACAAAACAAAAAACTA+CGG | + | chr3.4:90750049-90750068 | None:intergenic | 20.0% |
| !! | TAAAATGTAAACAGGAAAAA+AGG | + | chr3.4:90753641-90753660 | None:intergenic | 20.0% |
| !! | TCATTATCTCATATTATTAC+CGG | - | chr3.4:90751637-90751656 | MS.gene37481:intron | 20.0% |
| !! | TCCAATAAGAATAGAATTTA+TGG | - | chr3.4:90754113-90754132 | MS.gene37481:intron | 20.0% |
| !! | TTAAACTCATAATTTATTCC+AGG | - | chr3.4:90754240-90754259 | MS.gene37481:CDS | 20.0% |
| !! | TTCTGTTAAATCAATTTGAA+GGG | + | chr3.4:90749212-90749231 | None:intergenic | 20.0% |
| !!! | AGAAATGATTTTGACATATT+TGG | - | chr3.4:90749544-90749563 | MS.gene37481:intron | 20.0% |
| !!! | ATTACATGCATGTATATTTT+TGG | - | chr3.4:90750476-90750495 | MS.gene37481:intron | 20.0% |
| !!! | ATTGATAATGAATGATTTCT+CGG | + | chr3.4:90753996-90754015 | None:intergenic | 20.0% |
| !!! | CTGTAAATTAATATTTTGAC+GGG | - | chr3.4:90752505-90752524 | MS.gene37481:intron | 20.0% |
| !!! | CTGTTTTATAGAAAAGAAAA+TGG | - | chr3.4:90753680-90753699 | MS.gene37481:intron | 20.0% |
| !!! | GAGATTATTTTATATATGCA+TGG | - | chr3.4:90754549-90754568 | MS.gene37481:CDS | 20.0% |
| !!! | TAATTTCTAAGAATACAATG+AGG | - | chr3.4:90753307-90753326 | MS.gene37481:intron | 20.0% |
| !!! | TACTATTCTAAAAACTTTAG+GGG | + | chr3.4:90750203-90750222 | None:intergenic | 20.0% |
| !!! | TCAATTAGTTTATTTCCAAT+TGG | - | chr3.4:90751947-90751966 | MS.gene37481:intron | 20.0% |
| !!! | TTATGGTAGTTATTTTGAAA+AGG | - | chr3.4:90754130-90754149 | MS.gene37481:intron | 20.0% |
| !!! | TTGAATTTAAGTTAAGTACT+TGG | + | chr3.4:90750908-90750927 | None:intergenic | 20.0% |
| !!! | TTTCCAGGTTAAAATTTTTA+GGG | + | chr3.4:90751906-90751925 | None:intergenic | 20.0% |
| ! | AAAAAAAACCTTAGTTAGCA+CGG | + | chr3.4:90750832-90750851 | None:intergenic | 25.0% |
| ! | AAATTGCTATAGGTAATCAA+GGG | - | chr3.4:90751538-90751557 | MS.gene37481:intron | 25.0% |
| ! | AACAGTGAAATTAGAATAAG+AGG | + | chr3.4:90753665-90753684 | None:intergenic | 25.0% |
| ! | ACATAAAAGAAATCATGTGA+TGG | + | chr3.4:90750641-90750660 | None:intergenic | 25.0% |
| ! | ACATCAAAATATTTCCTCAT+AGG | + | chr3.4:90754081-90754100 | None:intergenic | 25.0% |
| ! | ACCTACAATCAATTTACAAT+AGG | + | chr3.4:90749795-90749814 | None:intergenic | 25.0% |
| ! | ACCTCAATTATATTACCAAT+TGG | + | chr3.4:90751965-90751984 | None:intergenic | 25.0% |
| ! | AGAATAGAATTATGACATAC+TGG | - | chr3.4:90750546-90750565 | MS.gene37481:intron | 25.0% |
| ! | ATAATATGTTCAGTATTAGC+AGG | + | chr3.4:90751449-90751468 | None:intergenic | 25.0% |
| ! | ATGAATAAACCAGTATCAAT+GGG | + | chr3.4:90749406-90749425 | None:intergenic | 25.0% |
| ! | ATGATCATCATGTTAATGTT+TGG | - | chr3.4:90749437-90749456 | MS.gene37481:intron | 25.0% |
| ! | CAGGCATATCTTATATTTAA+CGG | - | chr3.4:90751704-90751723 | MS.gene37481:intron | 25.0% |
| ! | CATCAAAATATTTCCTCATA+GGG | + | chr3.4:90754080-90754099 | None:intergenic | 25.0% |
| ! | CTTAGAAATTAGTTACTTAG+CGG | + | chr3.4:90753298-90753317 | None:intergenic | 25.0% |
| ! | CTTCTACTATGTTTATTTCA+CGG | + | chr3.4:90752423-90752442 | None:intergenic | 25.0% |
| ! | CTTCTGTTAAATCAATTTGA+AGG | + | chr3.4:90749213-90749232 | None:intergenic | 25.0% |
| ! | GAATAGAATTATGACATACT+GGG | - | chr3.4:90750547-90750566 | MS.gene37481:intron | 25.0% |
| ! | TAAATATAAGATATGCCTGA+AGG | + | chr3.4:90751703-90751722 | None:intergenic | 25.0% |
| ! | TAAGAGGATAAAATGTAAAC+AGG | + | chr3.4:90753649-90753668 | None:intergenic | 25.0% |
| ! | TAAGATTAGAGACTTTAATG+AGG | - | chr3.4:90753791-90753810 | MS.gene37481:CDS | 25.0% |
| ! | TATAGGGATATACATCTATA+AGG | + | chr3.4:90752208-90752227 | None:intergenic | 25.0% |
| ! | TATCTGTTTAATCTTAGACA+CGG | + | chr3.4:90750092-90750111 | None:intergenic | 25.0% |
| ! | TATTGTAAATTGATTGTAGG+TGG | - | chr3.4:90749794-90749813 | MS.gene37481:intron | 25.0% |
| ! | TCCTATTGTAAATTGATTGT+AGG | - | chr3.4:90749791-90749810 | MS.gene37481:intron | 25.0% |
| ! | TGAAAAGGCAGTTATAAAAT+AGG | - | chr3.4:90754145-90754164 | MS.gene37481:intron | 25.0% |
| ! | TGATCATCATGTTAATGTTT+GGG | - | chr3.4:90749438-90749457 | MS.gene37481:intron | 25.0% |
| ! | TTGAATGTAATAACATGTGT+CGG | + | chr3.4:90751612-90751631 | None:intergenic | 25.0% |
| ! | TTGCACAAGGAAAAAAATAA+AGG | + | chr3.4:90750331-90750350 | None:intergenic | 25.0% |
| ! | TTTCCTCAACTGTAAATTAA+GGG | - | chr3.4:90752383-90752402 | MS.gene37481:intron | 25.0% |
| !! | AAATATAAAGAAGTGCACAA+GGG | - | chr3.4:90753246-90753265 | MS.gene37481:intron | 25.0% |
| !! | AAATCATTAAAAAGTGCATG+AGG | + | chr3.4:90754419-90754438 | None:intergenic | 25.0% |
| !! | AAGTATCTTTTGTATTTGTG+CGG | + | chr3.4:90753198-90753217 | None:intergenic | 25.0% |
| !! | ACTATTCTAAAAACTTTAGG+GGG | + | chr3.4:90750202-90750221 | None:intergenic | 25.0% |
| !! | AGTCCTTTTTCTTCTTTAAT+CGG | - | chr3.4:90753754-90753773 | MS.gene37481:CDS | 25.0% |
| !! | ATGATTTCTTTTATGTCAGA+TGG | - | chr3.4:90750645-90750664 | MS.gene37481:CDS | 25.0% |
| !! | CGTCATACTGATAATATTTT+TGG | - | chr3.4:90749498-90749517 | MS.gene37481:intron | 25.0% |
| !! | CTTCAAATTGATTTAACAGA+AGG | - | chr3.4:90749211-90749230 | MS.gene37481:CDS | 25.0% |
| !! | GTTTCCAGGTTAAAATTTTT+AGG | + | chr3.4:90751907-90751926 | None:intergenic | 25.0% |
| !! | TCCAATTGGTAATATAATTG+AGG | - | chr3.4:90751961-90751980 | MS.gene37481:intron | 25.0% |
| !! | TCTGAGATTGATTTAAAACT+TGG | + | chr3.4:90750773-90750792 | None:intergenic | 25.0% |
| !! | TGCTTTCAAATATTTTCACA+AGG | - | chr3.4:90751476-90751495 | MS.gene37481:intron | 25.0% |
| !! | TGTCTAAGATTAAACAGATA+AGG | - | chr3.4:90750092-90750111 | MS.gene37481:intron | 25.0% |
| !!! | ATGTCTAACTTTTTTGGATA+TGG | + | chr3.4:90751316-90751335 | None:intergenic | 25.0% |
| !!! | CTACTATCATGTTTATTTTG+TGG | + | chr3.4:90752454-90752473 | None:intergenic | 25.0% |
| !!! | GATTGGTTTTGAGAATTTAT+TGG | + | chr3.4:90751773-90751792 | None:intergenic | 25.0% |
| !!! | TTATTTTTTATCCTTGCACA+AGG | + | chr3.4:90750344-90750363 | None:intergenic | 25.0% |
| !!! | TTTATTTTTTTCCTTGTGCA+AGG | - | chr3.4:90750330-90750349 | MS.gene37481:CDS | 25.0% |
| !!! | TTTGTTTTCACCAGAATTAA+GGG | + | chr3.4:90750397-90750416 | None:intergenic | 25.0% |
| AAAATTGAATGAACCCTATG+AGG | - | chr3.4:90754064-90754083 | MS.gene37481:intron | 30.0% | |
| AAACAGATTCTACCATTTGA+CGG | + | chr3.4:90753506-90753525 | None:intergenic | 30.0% | |
| AAAGAAAATGGAAGAGATAC+AGG | - | chr3.4:90753692-90753711 | MS.gene37481:intron | 30.0% | |
| AACTAATCGTCTTACTATGT+AGG | + | chr3.4:90754171-90754190 | None:intergenic | 30.0% | |
| AATTGCTATAGGTAATCAAG+GGG | - | chr3.4:90751539-90751558 | MS.gene37481:intron | 30.0% | |
| ACATCCAATGCTTAACATAA+CGG | - | chr3.4:90750437-90750456 | MS.gene37481:intron | 30.0% | |
| ACGATAGACAAATTCTTGTA+TGG | - | chr3.4:90754472-90754491 | MS.gene37481:CDS | 30.0% | |
| AGAAAAATAGAACACAGTAG+AGG | - | chr3.4:90752081-90752100 | MS.gene37481:intron | 30.0% | |
| AGAAGAGAAGAAATACATCA+GGG | - | chr3.4:90752034-90752053 | MS.gene37481:intron | 30.0% | |
| AGACATATACAGCAAAAGAT+TGG | + | chr3.4:90752575-90752594 | None:intergenic | 30.0% | |
| AGATGCAAAAATAGTAACTC+CGG | + | chr3.4:90750308-90750327 | None:intergenic | 30.0% | |
| AGTCCGATTAAAGAAGAAAA+AGG | + | chr3.4:90753760-90753779 | None:intergenic | 30.0% | |
| ATACTTCAATCCAATAGAGT+TGG | + | chr3.4:90754354-90754373 | None:intergenic | 30.0% | |
| ATATCATTCTCCAACTCTAT+TGG | - | chr3.4:90754341-90754360 | MS.gene37481:CDS | 30.0% | |
| ATGTCGATGATATAAAGCAA+AGG | + | chr3.4:90751568-90751587 | None:intergenic | 30.0% | |
| CAAATTGCTATAGGTAATCA+AGG | - | chr3.4:90751537-90751556 | MS.gene37481:intron | 30.0% | |
| CAATGCATTCAAATTGCTAT+AGG | - | chr3.4:90751528-90751547 | MS.gene37481:intron | 30.0% | |
| CAGCATATTTATGAGCTAAT+TGG | + | chr3.4:90749363-90749382 | None:intergenic | 30.0% | |
| CTTAATTCTGGTGAAAACAA+AGG | - | chr3.4:90750396-90750415 | MS.gene37481:intron | 30.0% | |
| CTTTCCTCAACTGTAAATTA+AGG | - | chr3.4:90752382-90752401 | MS.gene37481:intron | 30.0% | |
| GAATATTCATTGTACAGAAG+CGG | + | chr3.4:90751744-90751763 | None:intergenic | 30.0% | |
| GATAGTAGAAGACAAATCAT+CGG | - | chr3.4:90752353-90752372 | MS.gene37481:intron | 30.0% | |
| GATAGTAGAAGACAAATCAT+TGG | - | chr3.4:90752353-90752372 | MS.gene37481:intron | 30.0% | |
| GATGAATAAACCAGTATCAA+TGG | + | chr3.4:90749407-90749426 | None:intergenic | 30.0% | |
| TAAATTGAGATCCATATCCA+AGG | + | chr3.4:90754296-90754315 | None:intergenic | 30.0% | |
| TAACTGTAAAATGAACATCC+CGG | + | chr3.4:90753556-90753575 | None:intergenic | 30.0% | |
| TAGAAGAGAAGAAATACATC+AGG | - | chr3.4:90752033-90752052 | MS.gene37481:intron | 30.0% | |
| TAGTTAGAATCAATATTGGC+AGG | - | chr3.4:90749680-90749699 | MS.gene37481:intron | 30.0% | |
| TGAGTTGTAGCTAATTGAAT+AGG | + | chr3.4:90753056-90753075 | None:intergenic | 30.0% | |
| TGATGTTATGTATTGTCGAA+AGG | - | chr3.4:90750607-90750626 | MS.gene37481:CDS | 30.0% | |
| TGATTCAAGATTGAGATTGT+GGG | - | chr3.4:90752968-90752987 | MS.gene37481:CDS | 30.0% | |
| TTGATGCATTACAAGAAAAC+AGG | + | chr3.4:90752886-90752905 | None:intergenic | 30.0% | |
| TTTGATTCCTGTGAGTAATA+AGG | + | chr3.4:90750958-90750977 | None:intergenic | 30.0% | |
| TTTGGTCATAAACATTCACA+AGG | + | chr3.4:90752598-90752617 | None:intergenic | 30.0% | |
| ! | AAAAGATTGGCTATTGCTAT+AGG | + | chr3.4:90752562-90752581 | None:intergenic | 30.0% |
| ! | ATTAAAAAGTGCATGAGGTT+CGG | + | chr3.4:90754414-90754433 | None:intergenic | 30.0% |
| ! | ATTTGTGCGGCTAATTTTAA+AGG | + | chr3.4:90753185-90753204 | None:intergenic | 30.0% |
| ! | CAAATATAAAGAAGTGCACA+AGG | - | chr3.4:90753245-90753264 | MS.gene37481:intron | 30.0% |
| ! | GTAAGACGATTAGTTCTTAT+TGG | - | chr3.4:90754176-90754195 | MS.gene37481:intron | 30.0% |
| ! | TTGTTTTCACCAGAATTAAG+GGG | + | chr3.4:90750396-90750415 | None:intergenic | 30.0% |
| !! | TAATTGAGGTTCTGAAAAGT+TGG | - | chr3.4:90751975-90751994 | MS.gene37481:intron | 30.0% |
| !! | TATCATACATTGATTCCTGA+CGG | - | chr3.4:90752292-90752311 | MS.gene37481:intron | 30.0% |
| !! | TTATGTTAAGCATTGGATGT+TGG | + | chr3.4:90750437-90750456 | None:intergenic | 30.0% |
| !! | TTGTCTAGTTGGTATTCTTT+TGG | - | chr3.4:90754039-90754058 | MS.gene37481:intron | 30.0% |
| !!! | AATGATTTTGTTATTGCCAC+AGG | - | chr3.4:90754431-90754450 | MS.gene37481:CDS | 30.0% |
| !!! | CTCGTAATGTCTAACTTTTT+TGG | + | chr3.4:90751322-90751341 | None:intergenic | 30.0% |
| !!! | CTTTGTTTTCACCAGAATTA+AGG | + | chr3.4:90750398-90750417 | None:intergenic | 30.0% |
| !!! | GTGACTACTAATTGTTGTTT+TGG | + | chr3.4:90752616-90752635 | None:intergenic | 30.0% |
| AAAAGCTTGGACATCACATA+TGG | - | chr3.4:90752259-90752278 | MS.gene37481:intron | 35.0% | |
| AAAGTCATTGCTTGTCTAGT+TGG | - | chr3.4:90754028-90754047 | MS.gene37481:intron | 35.0% | |
| AACATCAAAGACAGAGAATC+CGG | - | chr3.4:90749076-90749095 | MS.gene37481:CDS | 35.0% | |
| AAGAATCAACCCCTTAATTC+TGG | - | chr3.4:90750384-90750403 | MS.gene37481:intron | 35.0% | |
| AAGATTGAATAGAACCTGAG+TGG | + | chr3.4:90749473-90749492 | None:intergenic | 35.0% | |
| AATTAATTGCGCCTTTGTGA+GGG | + | chr3.4:90749189-90749208 | None:intergenic | 35.0% | |
| AATTAGTTACTTAGCGGTTG+AGG | + | chr3.4:90753292-90753311 | None:intergenic | 35.0% | |
| ACAATTAGTAGTCACTCAAG+AGG | - | chr3.4:90752621-90752640 | MS.gene37481:CDS | 35.0% | |
| AGCTTGACATATTTCACAAG+TGG | + | chr3.4:90750503-90750522 | None:intergenic | 35.0% | |
| AGTCATAGGCAGACTTTATT+TGG | - | chr3.4:90751879-90751898 | MS.gene37481:intron | 35.0% | |
| AGTGCTAATCATTATGCTGA+AGG | + | chr3.4:90750255-90750274 | None:intergenic | 35.0% | |
| ATCAACTTGAAACCGATCAA+TGG | - | chr3.4:90753918-90753937 | MS.gene37481:intron | 35.0% | |
| ATCTCACTTCTGGATTATTC+AGG | - | chr3.4:90753337-90753356 | MS.gene37481:intron | 35.0% | |
| ATGAAGCAGAAATTACATCC+AGG | - | chr3.4:90751066-90751085 | MS.gene37481:intron | 35.0% | |
| ATGAATCTATAAACTCCTGC+TGG | - | chr3.4:90753408-90753427 | MS.gene37481:intron | 35.0% | |
| ATGCTGTATCTTCAGCTATT+TGG | - | chr3.4:90749377-90749396 | MS.gene37481:intron | 35.0% | |
| ATGGTGTAATGACTGTTGAA+TGG | - | chr3.4:90750664-90750683 | MS.gene37481:CDS | 35.0% | |
| ATTAGTTACTTAGCGGTTGA+GGG | + | chr3.4:90753291-90753310 | None:intergenic | 35.0% | |
| ATTTGGTATCCCATTGATAC+TGG | - | chr3.4:90749394-90749413 | MS.gene37481:intron | 35.0% | |
| CAACCCTTAATTTACAGTTG+AGG | + | chr3.4:90752389-90752408 | None:intergenic | 35.0% | |
| CAATCACTAGACATAAAGCA+TGG | - | chr3.4:90751788-90751807 | MS.gene37481:intron | 35.0% | |
| CATGCAGATACATTCATCAA+AGG | + | chr3.4:90749636-90749655 | None:intergenic | 35.0% | |
| CATGCTTTATGTCTAGTGAT+TGG | + | chr3.4:90751790-90751809 | None:intergenic | 35.0% | |
| CCTTCTCTAATCAACTCATA+CGG | - | chr3.4:90753590-90753609 | MS.gene37481:intron | 35.0% | |
| CTGATTCAAGATTGAGATTG+TGG | - | chr3.4:90752967-90752986 | MS.gene37481:CDS | 35.0% | |
| CTGGTTTAATCAACAAGATC+AGG | - | chr3.4:90753427-90753446 | MS.gene37481:intron | 35.0% | |
| GAAAAAAGGGAAGGAAAGTA+AGG | + | chr3.4:90753627-90753646 | None:intergenic | 35.0% | |
| GAATTTCAAAATGCCTGGAA+AGG | - | chr3.4:90749821-90749840 | MS.gene37481:intron | 35.0% | |
| GATTTCTCGGTAAAATCAGT+AGG | + | chr3.4:90753983-90754002 | None:intergenic | 35.0% | |
| GCTTGACATATTTCACAAGT+GGG | + | chr3.4:90750502-90750521 | None:intergenic | 35.0% | |
| GGATGTAATTTCTGCTTCAT+TGG | + | chr3.4:90751066-90751085 | None:intergenic | 35.0% | |
| GTAAAATCAGTAGGTTGTTG+TGG | + | chr3.4:90753974-90753993 | None:intergenic | 35.0% | |
| GTCAAATGGTAGAATCTGTT+TGG | - | chr3.4:90753505-90753524 | MS.gene37481:intron | 35.0% | |
| GTGCTAATCATTATGCTGAA+GGG | + | chr3.4:90750254-90750273 | None:intergenic | 35.0% | |
| TATCACAAGGTCAGACATAT+TGG | + | chr3.4:90754587-90754606 | None:intergenic | 35.0% | |
| TCAAATACAAAAATGCGTCC+TGG | - | chr3.4:90750973-90750992 | MS.gene37481:intron | 35.0% | |
| TGTAAACAGGAAAAAAGGGA+AGG | + | chr3.4:90753636-90753655 | None:intergenic | 35.0% | |
| TGTAAATTGATTGTAGGTGG+TGG | - | chr3.4:90749797-90749816 | MS.gene37481:intron | 35.0% | |
| TGTTATGTATTGTCGAAAGG+AGG | - | chr3.4:90750610-90750629 | MS.gene37481:CDS | 35.0% | |
| TTAGACATTACGAGTTCAAG+CGG | - | chr3.4:90751328-90751347 | MS.gene37481:intron | 35.0% | |
| TTATGACATACTGGGAACTT+AGG | - | chr3.4:90750555-90750574 | MS.gene37481:intron | 35.0% | |
| TTCCAACATACTCATTTGTG+TGG | - | chr3.4:90750002-90750021 | MS.gene37481:intron | 35.0% | |
| ! | ATCTCTTCTCTGAAAGTCAT+AGG | - | chr3.4:90751865-90751884 | MS.gene37481:intron | 35.0% |
| ! | ATCTTGTTGATTAAACCAGC+AGG | + | chr3.4:90753426-90753445 | None:intergenic | 35.0% |
| ! | ATTCTAAAAACTTTAGGGGG+TGG | + | chr3.4:90750199-90750218 | None:intergenic | 35.0% |
| ! | GCAAAACTATTTTACACCGT+TGG | - | chr3.4:90754207-90754226 | MS.gene37481:intron | 35.0% |
| ! | GGTCTTTACTAGTCTAAACT+TGG | + | chr3.4:90750071-90750090 | None:intergenic | 35.0% |
| ! | TGATTTTATGCGATTAGCGA+AGG | + | chr3.4:90749119-90749138 | None:intergenic | 35.0% |
| ! | TTAAAAAGTGCATGAGGTTC+GGG | + | chr3.4:90754413-90754432 | None:intergenic | 35.0% |
| ! | TTTTCCTGCTCTGTTATAAG+TGG | - | chr3.4:90753479-90753498 | MS.gene37481:intron | 35.0% |
| !! | ATCATACATTGATTCCTGAC+GGG | - | chr3.4:90752293-90752312 | MS.gene37481:intron | 35.0% |
| !! | CGTATGAGTTGATTAGAGAA+GGG | + | chr3.4:90753592-90753611 | None:intergenic | 35.0% |
| !! | GATACTGGTTTATTCATCAC+TGG | - | chr3.4:90749409-90749428 | MS.gene37481:intron | 35.0% |
| !! | GGACCCTAAAAATTTTAACC+TGG | - | chr3.4:90751900-90751919 | MS.gene37481:intron | 35.0% |
| !! | TACTGGTTGTTATTTCATCC+TGG | + | chr3.4:90754261-90754280 | None:intergenic | 35.0% |
| !! | TGATGGTGCAATACGTTTTT+GGG | - | chr3.4:90750725-90750744 | MS.gene37481:CDS | 35.0% |
| !! | TGTCTCTAACACTAGTTCTA+CGG | + | chr3.4:90749734-90749753 | None:intergenic | 35.0% |
| !!! | CAATACGTTTTTGGGACATA+AGG | - | chr3.4:90750733-90750752 | MS.gene37481:CDS | 35.0% |
| AAATCAGTAGGTTGTTGTGG+CGG | + | chr3.4:90753971-90753990 | None:intergenic | 40.0% | |
| AAGAAAGTTGCCAATGGAAG+TGG | - | chr3.4:90751000-90751019 | MS.gene37481:intron | 40.0% | |
| AAGGTCAATTGCCGATGAAA+TGG | - | chr3.4:90754503-90754522 | MS.gene37481:CDS | 40.0% | |
| AATGGTCTGCTTCAAGTGAA+TGG | - | chr3.4:90750682-90750701 | MS.gene37481:CDS | 40.0% | |
| ACAAGGTCAGACATATTGGA+AGG | + | chr3.4:90754583-90754602 | None:intergenic | 40.0% | |
| ACAGAGGGCAGATAAGTATT+AGG | - | chr3.4:90752534-90752553 | MS.gene37481:intron | 40.0% | |
| ACTGTGTCTATATGGTTTCC+AGG | + | chr3.4:90751921-90751940 | None:intergenic | 40.0% | |
| AGAAGAAATACATCAGGGTG+AGG | - | chr3.4:90752039-90752058 | MS.gene37481:intron | 40.0% | |
| AGACTCGCAAATTACGAACA+AGG | + | chr3.4:90750868-90750887 | None:intergenic | 40.0% | |
| AGTGAATGGGTCTTGATTAC+CGG | - | chr3.4:90750696-90750715 | MS.gene37481:CDS | 40.0% | |
| ATGAGACACTGTGCTAACAT+GGG | + | chr3.4:90751220-90751239 | None:intergenic | 40.0% | |
| ATGAGGGTTGTGAAAGTAAG+TGG | - | chr3.4:90753104-90753123 | MS.gene37481:intron | 40.0% | |
| ATGCATTGCAGATTGACAGA+AGG | + | chr3.4:90751516-90751535 | None:intergenic | 40.0% | |
| ATGCGATTAGCGAAGGAATT+TGG | + | chr3.4:90749112-90749131 | None:intergenic | 40.0% | |
| ATGGTCTGCTTCAAGTGAAT+GGG | - | chr3.4:90750683-90750702 | MS.gene37481:CDS | 40.0% | |
| ATTAATTGCGCCTTTGTGAG+GGG | + | chr3.4:90749188-90749207 | None:intergenic | 40.0% | |
| CATGCATGGAACAAAAACGA+CGG | + | chr3.4:90753087-90753106 | None:intergenic | 40.0% | |
| CCTGTGAGTAATAAGGCTTT+AGG | + | chr3.4:90750951-90750970 | None:intergenic | 40.0% | |
| CGTCTTTGTGATATTGCTTC+TGG | - | chr3.4:90749918-90749937 | MS.gene37481:intron | 40.0% | |
| CTAGACATAAAGCATGGTCT+TGG | - | chr3.4:90751794-90751813 | MS.gene37481:intron | 40.0% | |
| GAATTAATTGCGCCTTTGTG+AGG | + | chr3.4:90749190-90749209 | None:intergenic | 40.0% | |
| GACAGGATTGAAAGTAACAG+AGG | - | chr3.4:90751134-90751153 | MS.gene37481:intron | 40.0% | |
| GACCACACAAATGAGTATGT+TGG | + | chr3.4:90750007-90750026 | None:intergenic | 40.0% | |
| GACGATTCACTGTGTCTATA+TGG | + | chr3.4:90751929-90751948 | None:intergenic | 40.0% | |
| GCAGATACATTCATCAAAGG+TGG | + | chr3.4:90749633-90749652 | None:intergenic | 40.0% | |
| GCATTTGCTCATACTTTGTC+TGG | - | chr3.4:90749942-90749961 | MS.gene37481:intron | 40.0% | |
| GGATTGAAAGTAACAGAGGA+TGG | - | chr3.4:90751138-90751157 | MS.gene37481:intron | 40.0% | |
| GTGAAACTGTGTTTCGTAAG+TGG | - | chr3.4:90750145-90750164 | MS.gene37481:intron | 40.0% | |
| GTGGTGAATTTCAAAATGCC+TGG | - | chr3.4:90749816-90749835 | MS.gene37481:intron | 40.0% | |
| GTTATAAGTGGTCCGTCAAA+TGG | - | chr3.4:90753491-90753510 | MS.gene37481:intron | 40.0% | |
| GTTTAATGGCTATGCACCAA+CGG | + | chr3.4:90754226-90754245 | None:intergenic | 40.0% | |
| TAATCAACTCATACGGCGTA+TGG | - | chr3.4:90753597-90753616 | MS.gene37481:intron | 40.0% | |
| TATACGAACCAGCAACATGT+AGG | - | chr3.4:90750274-90750293 | MS.gene37481:CDS | 40.0% | |
| TATGAGACACTGTGCTAACA+TGG | + | chr3.4:90751221-90751240 | None:intergenic | 40.0% | |
| TCCAGGAATGATTTCTACTC+AGG | - | chr3.4:90751083-90751102 | MS.gene37481:intron | 40.0% | |
| TCCTGAGTAGAAATCATTCC+TGG | + | chr3.4:90751087-90751106 | None:intergenic | 40.0% | |
| TCTATCTAGTCACCTATCAG+TGG | + | chr3.4:90750529-90750548 | None:intergenic | 40.0% | |
| TGACCTTGTGATAAACTGCA+GGG | - | chr3.4:90754594-90754613 | MS.gene37481:CDS | 40.0% | |
| TGATGTTCTGTCTGATGACA+GGG | - | chr3.4:90752943-90752962 | MS.gene37481:CDS | 40.0% | |
| TGGAAATCGTCCTTAGAACT+GGG | - | chr3.4:90750165-90750184 | MS.gene37481:intron | 40.0% | |
| TTAGCACAGTGTCTCATACA+AGG | - | chr3.4:90751223-90751242 | MS.gene37481:intron | 40.0% | |
| TTAGTTACTTAGCGGTTGAG+GGG | + | chr3.4:90753290-90753309 | None:intergenic | 40.0% | |
| TTGATGTTCTGTCTGATGAC+AGG | - | chr3.4:90752942-90752961 | MS.gene37481:CDS | 40.0% | |
| ! | CAAAGAGTGCACCATTTCAT+CGG | + | chr3.4:90754517-90754536 | None:intergenic | 40.0% |
| ! | CATGGGTCTATTGACTAGTA+TGG | + | chr3.4:90751203-90751222 | None:intergenic | 40.0% |
| ! | CGTTTTTGTTCCATGCATGA+GGG | - | chr3.4:90753088-90753107 | MS.gene37481:intron | 40.0% |
| ! | GGAATTTGGACGCAATTTTC+CGG | + | chr3.4:90749098-90749117 | None:intergenic | 40.0% |
| ! | TAGGTTTGCTTGTTTGCAAG+CGG | + | chr3.4:90753037-90753056 | None:intergenic | 40.0% |
| !! | ATTATTACCGGTGTCATGTC+CGG | - | chr3.4:90751649-90751668 | MS.gene37481:intron | 40.0% |
| !! | CCGTATGAGTTGATTAGAGA+AGG | + | chr3.4:90753593-90753612 | None:intergenic | 40.0% |
| !! | CCTAAAGCCTTATTACTCAC+AGG | - | chr3.4:90750948-90750967 | MS.gene37481:intron | 40.0% |
| !! | GTGATGGTGCAATACGTTTT+TGG | - | chr3.4:90750724-90750743 | MS.gene37481:CDS | 40.0% |
| !! | TCATACATTGATTCCTGACG+GGG | - | chr3.4:90752294-90752313 | MS.gene37481:intron | 40.0% |
| !! | TCGTTTTTGTTCCATGCATG+AGG | - | chr3.4:90753087-90753106 | MS.gene37481:intron | 40.0% |
| AACTGGCAGGCTATCATCTA+AGG | - | chr3.4:90751038-90751057 | MS.gene37481:intron | 45.0% | |
| AATCAATCTCAGACGCAGCT+TGG | - | chr3.4:90750780-90750799 | MS.gene37481:intron | 45.0% | |
| ACTGGCAGGCTATCATCTAA+GGG | - | chr3.4:90751039-90751058 | MS.gene37481:intron | 45.0% | |
| ACTTTCACAACCCTCATGCA+TGG | + | chr3.4:90753101-90753120 | None:intergenic | 45.0% | |
| AGATTGTGGGATGTTGAGTC+AGG | - | chr3.4:90752981-90753000 | MS.gene37481:CDS | 45.0% | |
| AGCGCCGTTATGTTAAGCAT+TGG | + | chr3.4:90750444-90750463 | None:intergenic | 45.0% | |
| AGGAACACTGATCTCACTTC+TGG | - | chr3.4:90753327-90753346 | MS.gene37481:intron | 45.0% | |
| AGTCTTGCACTCAATGGAAC+TGG | - | chr3.4:90752166-90752185 | MS.gene37481:intron | 45.0% | |
| ATCTAGTCACCTATCAGTGG+TGG | + | chr3.4:90750526-90750545 | None:intergenic | 45.0% | |
| CAAACGTTCCGTGCTAACTA+AGG | - | chr3.4:90750821-90750840 | MS.gene37481:intron | 45.0% | |
| CAACATGTAGGTTTGAGTGC+CGG | - | chr3.4:90750286-90750305 | MS.gene37481:CDS | 45.0% | |
| CACAACAGTCTTGCACTCAA+TGG | - | chr3.4:90752160-90752179 | MS.gene37481:intron | 45.0% | |
| CACTCAAACCTACATGTTGC+TGG | + | chr3.4:90750285-90750304 | None:intergenic | 45.0% | |
| CATACTTTGTCTGGTCATCG+TGG | - | chr3.4:90749951-90749970 | MS.gene37481:intron | 45.0% | |
| CTGACCTTGTGATAAACTGC+AGG | - | chr3.4:90754593-90754612 | MS.gene37481:CDS | 45.0% | |
| CTGTTTGGTTGTCAGCTGTT+TGG | - | chr3.4:90753520-90753539 | MS.gene37481:intron | 45.0% | |
| GAAATCGTCCTTAGAACTGG+GGG | - | chr3.4:90750167-90750186 | MS.gene37481:intron | 45.0% | |
| GATCAGGTATGTTCAACAGC+TGG | - | chr3.4:90753443-90753462 | MS.gene37481:intron | 45.0% | |
| GATCGTGCAACTGCTCATTA+TGG | - | chr3.4:90751105-90751124 | MS.gene37481:intron | 45.0% | |
| GCTCATCTCAGACCATTGAT+CGG | + | chr3.4:90753933-90753952 | None:intergenic | 45.0% | |
| GGAAATCGTCCTTAGAACTG+GGG | - | chr3.4:90750166-90750185 | MS.gene37481:intron | 45.0% | |
| GGACAGAAGAAAGTTGCCAA+TGG | - | chr3.4:90750994-90751013 | MS.gene37481:intron | 45.0% | |
| GGCATGTATCTCTTAAGTGC+AGG | - | chr3.4:90751159-90751178 | MS.gene37481:intron | 45.0% | |
| GTGAATGGGTCTTGATTACC+GGG | - | chr3.4:90750697-90750716 | MS.gene37481:CDS | 45.0% | |
| GTGGAAATCGTCCTTAGAAC+TGG | - | chr3.4:90750164-90750183 | MS.gene37481:intron | 45.0% | |
| TCTCATACGCTTATTGCTGC+TGG | - | chr3.4:90749876-90749895 | MS.gene37481:intron | 45.0% | |
| TGAATGGGTCTTGATTACCG+GGG | - | chr3.4:90750698-90750717 | MS.gene37481:CDS | 45.0% | |
| TTAGATGATAGCCTGCCAGT+TGG | + | chr3.4:90751039-90751058 | None:intergenic | 45.0% | |
| TTCTTGTATGGTCACCTGCA+AGG | - | chr3.4:90754484-90754503 | MS.gene37481:CDS | 45.0% | |
| TTGGCAACTTTCTTCTGTCC+AGG | + | chr3.4:90750994-90751013 | None:intergenic | 45.0% | |
| ! | CAGTAAAGCAGCATTAGCCT+TGG | - | chr3.4:90754276-90754295 | MS.gene37481:CDS | 45.0% |
| ! | GCAGTCTTATACACCTTTCC+AGG | + | chr3.4:90749837-90749856 | None:intergenic | 45.0% |
| !! | AACATGTGTCGGTGTTGTGT+CGG | + | chr3.4:90751601-90751620 | None:intergenic | 45.0% |
| !! | AGCAGCATTAGCCTTGGATA+TGG | - | chr3.4:90754282-90754301 | MS.gene37481:CDS | 45.0% |
| !! | CAAGGCTAATGCTGCTTTAC+TGG | + | chr3.4:90754278-90754297 | None:intergenic | 45.0% |
| !! | CATACATTGATTCCTGACGG+GGG | - | chr3.4:90752295-90752314 | MS.gene37481:intron | 45.0% |
| !! | TGTCAGCTGTTTGGTTTGTC+AGG | - | chr3.4:90753529-90753548 | MS.gene37481:intron | 45.0% |
| !! | TATTATACAATAATATATTA+TGG | - | chr3.4:90752815-90752834 | MS.gene37481:intron | 5.0% |
| AACGCACGTACGATACTACG+TGG | - | chr3.4:90753380-90753399 | MS.gene37481:intron | 50.0% | |
| AATGGGTCTTGATTACCGGG+GGG | - | chr3.4:90750700-90750719 | MS.gene37481:CDS | 50.0% | |
| ACAAACACCGGACATGACAC+CGG | + | chr3.4:90751659-90751678 | None:intergenic | 50.0% | |
| ACGGAACGTTTGAGTAGAGG+TGG | + | chr3.4:90750813-90750832 | None:intergenic | 50.0% | |
| AGCACGGAACGTTTGAGTAG+AGG | + | chr3.4:90750816-90750835 | None:intergenic | 50.0% | |
| ATCAGGGTGAGGTAGAGAAG+TGG | - | chr3.4:90752050-90752069 | MS.gene37481:intron | 50.0% | |
| CAGTGCTTCATAGTGCCTTC+AGG | - | chr3.4:90751685-90751704 | MS.gene37481:intron | 50.0% | |
| CGGAACGTTTGAGTAGAGGT+GGG | + | chr3.4:90750812-90750831 | None:intergenic | 50.0% | |
| CGGACCACTTATAACAGAGC+AGG | + | chr3.4:90753486-90753505 | None:intergenic | 50.0% | |
| GAACTCGTTTCCCCTCACAA+AGG | - | chr3.4:90749175-90749194 | MS.gene37481:intron | 50.0% | |
| GAATGGGTCTTGATTACCGG+GGG | - | chr3.4:90750699-90750718 | MS.gene37481:CDS | 50.0% | |
| GCACTCAATGGAACTGGCTA+AGG | - | chr3.4:90752172-90752191 | MS.gene37481:intron | 50.0% | |
| GCTTATTGCTGCTGGAACTG+AGG | - | chr3.4:90749884-90749903 | MS.gene37481:intron | 50.0% | |
| GTGAACGTCGTAAACCGCTA+CGG | + | chr3.4:90749269-90749288 | None:intergenic | 50.0% | |
| TAGCGGTTTACGACGTTCAC+CGG | - | chr3.4:90749269-90749288 | MS.gene37481:intron | 50.0% | |
| TCATCGGCAATTGACCTTGC+AGG | + | chr3.4:90754501-90754520 | None:intergenic | 50.0% | |
| TCGCCCTGCAGTTTATCACA+AGG | + | chr3.4:90754600-90754619 | None:intergenic | 50.0% | |
| TGTCAAGCTCCACCACTGAT+AGG | - | chr3.4:90750514-90750533 | MS.gene37481:intron | 50.0% | |
| TGTGATAAACTGCAGGGCGA+AGG | - | chr3.4:90754600-90754619 | MS.gene37481:CDS | 50.0% | |
| TTGATTCCTGACGGGGGAAA+GGG | - | chr3.4:90752301-90752320 | MS.gene37481:intron | 50.0% | |
| TTGCCACAGGAGTTGTACAC+AGG | - | chr3.4:90754444-90754463 | MS.gene37481:CDS | 50.0% | |
| TTGGGACACTAACACCACTC+AGG | - | chr3.4:90749456-90749475 | MS.gene37481:intron | 50.0% | |
| TTTGACGGGACTGCAACAGA+GGG | - | chr3.4:90752519-90752538 | MS.gene37481:intron | 50.0% | |
| ! | AGCATTGGATGTTGGCACAG+TGG | + | chr3.4:90750429-90750448 | None:intergenic | 50.0% |
| ! | ATGTCCACTGCCACTTCCAT+TGG | + | chr3.4:90751013-90751032 | None:intergenic | 50.0% |
| ! | ATTGATTCCTGACGGGGGAA+AGG | - | chr3.4:90752300-90752319 | MS.gene37481:intron | 50.0% |
| ! | GCACTGGCATACACAAACAC+CGG | + | chr3.4:90751671-90751690 | None:intergenic | 50.0% |
| ! | TTTTGACGGGACTGCAACAG+AGG | - | chr3.4:90752518-90752537 | MS.gene37481:intron | 50.0% |
| !! | CTGAAGGCACTATGAAGCAC+TGG | + | chr3.4:90751687-90751706 | None:intergenic | 50.0% |
| !! | CTGTTTGGTTTGTCAGGTCC+GGG | - | chr3.4:90753535-90753554 | MS.gene37481:intron | 50.0% |
| !! | GCTCATTATGGTGCTGTGAC+AGG | - | chr3.4:90751117-90751136 | MS.gene37481:intron | 50.0% |
| !! | GCTGTTTGGTTTGTCAGGTC+CGG | - | chr3.4:90753534-90753553 | MS.gene37481:intron | 50.0% |
| !!! | TTTTGGGACATAAGGCGTGC+TGG | - | chr3.4:90750741-90750760 | MS.gene37481:intron | 50.0% |
| ACTCCAGCTATCCTGGTCGT+CGG | + | chr3.4:90754631-90754650 | None:intergenic | 55.0% | |
| AGCGGTTGAGGGGTGGAATT+GGG | + | chr3.4:90753280-90753299 | None:intergenic | 55.0% | |
| CCACAGGAGTTGTACACAGG+TGG | - | chr3.4:90754447-90754466 | MS.gene37481:CDS | 55.0% | |
| CCACCTGTGTACAACTCCTG+TGG | + | chr3.4:90754450-90754469 | None:intergenic | 55.0% | |
| CCATCTCCGTCGAAATCGCT+CGG | + | chr3.4:90749295-90749314 | None:intergenic | 55.0% | |
| GTTACTTAGCGGTTGAGGGG+TGG | + | chr3.4:90753287-90753306 | None:intergenic | 55.0% | |
| GTTGCCAATGGAAGTGGCAG+TGG | - | chr3.4:90751006-90751025 | MS.gene37481:intron | 55.0% | |
| TAGCGGTTGAGGGGTGGAAT+TGG | + | chr3.4:90753281-90753300 | None:intergenic | 55.0% | |
| TAGGTTGTTGTGGCGGTGGT+GGG | + | chr3.4:90753964-90753983 | None:intergenic | 55.0% | |
| TATTGCACCATCACACCCCC+CGG | + | chr3.4:90750718-90750737 | None:intergenic | 55.0% | |
| TCAGTAGGTTGTTGTGGCGG+TGG | + | chr3.4:90753968-90753987 | None:intergenic | 55.0% | |
| TGCGTCAGATGCATCCGTAG+CGG | - | chr3.4:90749252-90749271 | MS.gene37481:intron | 55.0% | |
| ! | AAGAGGCAGCGAGCTTTGAC+TGG | - | chr3.4:90752638-90752657 | MS.gene37481:CDS | 55.0% |
| ! | TTGATTACCGGGGGGTGTGA+TGG | - | chr3.4:90750708-90750727 | MS.gene37481:CDS | 55.0% |
| AGGTTGTTGTGGCGGTGGTG+GGG | + | chr3.4:90753963-90753982 | None:intergenic | 60.0% | |
| ATCCCGACGACCAGGATAGC+TGG | - | chr3.4:90754625-90754644 | MS.gene37481:CDS | 60.0% | |
| CCGAGCGATTTCGACGGAGA+TGG | - | chr3.4:90749292-90749311 | MS.gene37481:intron | 60.0% | |
| CTCCAGCTATCCTGGTCGTC+GGG | + | chr3.4:90754630-90754649 | None:intergenic | 60.0% | |
| CTTCAACCCTTTCCCCCGTC+AGG | + | chr3.4:90752310-90752329 | None:intergenic | 60.0% | |
| GGCAGTGGACATCTGCCAAC+TGG | - | chr3.4:90751021-90751040 | MS.gene37481:intron | 60.0% | |
| GGCATGCACCCCCAGTTCTA+AGG | + | chr3.4:90750178-90750197 | None:intergenic | 60.0% | |
| GTAGGTTGTTGTGGCGGTGG+TGG | + | chr3.4:90753965-90753984 | None:intergenic | 60.0% | |
| GTGGACATCTGCCAACTGGC+AGG | - | chr3.4:90751025-90751044 | MS.gene37481:intron | 60.0% | |
| CACCGGCCGAGCGATTTCGA+CGG | - | chr3.4:90749286-90749305 | MS.gene37481:intron | 65.0% | |
| CGAAGGAGATCCCGACGACC+AGG | - | chr3.4:90754617-90754636 | MS.gene37481:CDS | 65.0% | |
| CTCCGTCGAAATCGCTCGGC+CGG | + | chr3.4:90749291-90749310 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 90749061 | 90754656 | 90749061 | ID=MS.gene37481 |
| chr3.4 | mRNA | 90749061 | 90754656 | 90749061 | ID=MS.gene37481.t1;Parent=MS.gene37481 |
| chr3.4 | exon | 90754240 | 90754656 | 90754240 | ID=MS.gene37481.t1.exon1;Parent=MS.gene37481.t1 |
| chr3.4 | CDS | 90754240 | 90754656 | 90754240 | ID=cds.MS.gene37481.t1;Parent=MS.gene37481.t1 |
| chr3.4 | exon | 90753745 | 90753904 | 90753745 | ID=MS.gene37481.t1.exon2;Parent=MS.gene37481.t1 |
| chr3.4 | CDS | 90753745 | 90753904 | 90753745 | ID=cds.MS.gene37481.t1;Parent=MS.gene37481.t1 |
| chr3.4 | exon | 90752875 | 90753053 | 90752875 | ID=MS.gene37481.t1.exon3;Parent=MS.gene37481.t1 |
| chr3.4 | CDS | 90752875 | 90753053 | 90752875 | ID=cds.MS.gene37481.t1;Parent=MS.gene37481.t1 |
| chr3.4 | exon | 90752537 | 90752747 | 90752537 | ID=MS.gene37481.t1.exon4;Parent=MS.gene37481.t1 |
| chr3.4 | CDS | 90752537 | 90752747 | 90752537 | ID=cds.MS.gene37481.t1;Parent=MS.gene37481.t1 |
| chr3.4 | exon | 90750599 | 90750753 | 90750599 | ID=MS.gene37481.t1.exon5;Parent=MS.gene37481.t1 |
| chr3.4 | CDS | 90750599 | 90750753 | 90750599 | ID=cds.MS.gene37481.t1;Parent=MS.gene37481.t1 |
| chr3.4 | exon | 90750269 | 90750358 | 90750269 | ID=MS.gene37481.t1.exon6;Parent=MS.gene37481.t1 |
| chr3.4 | CDS | 90750269 | 90750358 | 90750269 | ID=cds.MS.gene37481.t1;Parent=MS.gene37481.t1 |
| chr3.4 | exon | 90749193 | 90749264 | 90749193 | ID=MS.gene37481.t1.exon7;Parent=MS.gene37481.t1 |
| chr3.4 | CDS | 90749193 | 90749264 | 90749193 | ID=cds.MS.gene37481.t1;Parent=MS.gene37481.t1 |
| chr3.4 | exon | 90749061 | 90749102 | 90749061 | ID=MS.gene37481.t1.exon8;Parent=MS.gene37481.t1 |
| chr3.4 | CDS | 90749061 | 90749102 | 90749061 | ID=cds.MS.gene37481.t1;Parent=MS.gene37481.t1 |
| Gene Sequence |
| Protein sequence |
