Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015235.t1 | XP_003611614.1 | 96.1 | 231 | 9 | 0 | 1 | 231 | 1 | 231 | 1.20E-125 | 459.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015235.t1 | Q9SZE8 | 55.7 | 246 | 88 | 6 | 1 | 231 | 1 | 240 | 5.8e-65 | 248.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015235.t1 | G7K3V2 | 96.1 | 231 | 9 | 0 | 1 | 231 | 1 | 231 | 8.5e-126 | 459.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene015235.t1 | TF | LOB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene011734 | MS.gene015235 | PPI |
| MS.gene041894 | MS.gene015235 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015235.t1 | MTR_5g015880 | 96.104 | 231 | 9 | 0 | 1 | 231 | 1 | 231 | 3.03e-165 | 455 |
| MS.gene015235.t1 | MTR_4g095600 | 70.539 | 241 | 53 | 6 | 1 | 231 | 1 | 233 | 3.20e-112 | 321 |
| MS.gene015235.t1 | MTR_1g106420 | 56.579 | 152 | 61 | 3 | 1 | 147 | 1 | 152 | 7.66e-55 | 174 |
| MS.gene015235.t1 | MTR_7g007010 | 64.545 | 110 | 39 | 0 | 1 | 110 | 3 | 112 | 1.79e-52 | 171 |
| MS.gene015235.t1 | MTR_6g018270 | 61.818 | 110 | 42 | 0 | 1 | 110 | 3 | 112 | 5.99e-50 | 164 |
| MS.gene015235.t1 | MTR_6g453130 | 48.684 | 152 | 71 | 4 | 1 | 147 | 3 | 152 | 5.79e-46 | 152 |
| MS.gene015235.t1 | MTR_1g110840 | 51.128 | 133 | 61 | 2 | 1 | 131 | 3 | 133 | 5.38e-45 | 150 |
| MS.gene015235.t1 | MTR_6g054150 | 48.120 | 133 | 65 | 3 | 1 | 131 | 3 | 133 | 9.29e-41 | 139 |
| MS.gene015235.t1 | MTR_6g054080 | 47.368 | 133 | 66 | 3 | 1 | 131 | 3 | 133 | 1.30e-39 | 136 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015235.t1 | AT4G37540 | 56.452 | 248 | 83 | 8 | 1 | 231 | 1 | 240 | 9.07e-83 | 247 |
| MS.gene015235.t1 | AT3G49940 | 57.031 | 256 | 76 | 10 | 1 | 231 | 1 | 247 | 9.26e-81 | 242 |
| MS.gene015235.t1 | AT5G67420 | 52.941 | 255 | 91 | 6 | 1 | 231 | 1 | 250 | 1.58e-75 | 229 |
| MS.gene015235.t1 | AT5G67420 | 52.941 | 255 | 91 | 6 | 1 | 231 | 1 | 250 | 1.58e-75 | 229 |
| MS.gene015235.t1 | AT1G67100 | 65.455 | 110 | 38 | 0 | 1 | 110 | 3 | 112 | 3.19e-52 | 169 |
| MS.gene015235.t1 | AT3G02550 | 63.636 | 110 | 40 | 0 | 1 | 110 | 3 | 112 | 7.61e-50 | 164 |
| MS.gene015235.t1 | AT1G68510 | 60.177 | 113 | 43 | 1 | 1 | 111 | 3 | 115 | 7.64e-47 | 155 |
Find 76 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTCATGAACCGGACTTTC+TGG | 0.160468 | 5.4:-9428843 | None:intergenic |
| GAAACTCCGGTAAGGGTTTA+AGG | 0.160922 | 5.4:-9428732 | None:intergenic |
| ACGCGTTGACCAACGGTTTC+CGG | 0.249914 | 5.4:+9428950 | MS.gene015235:CDS |
| ATTAAAATTCTCAAACAAAA+AGG | 0.262922 | 5.4:-9429098 | None:intergenic |
| GTGGCATGACCTTGAGCTTC+AGG | 0.279564 | 5.4:-9428357 | None:intergenic |
| ACTCACTACAACCCTTTCTA+AGG | 0.331551 | 5.4:-9428296 | None:intergenic |
| GAATTCATCGACGGTGTTCC+CGG | 0.351208 | 5.4:-9428988 | None:intergenic |
| GGACTTTCTGGTTCGGATCT+CGG | 0.355586 | 5.4:-9428831 | None:intergenic |
| AGTCCGACAGCACCGTTAAC+GGG | 0.370602 | 5.4:-9428646 | None:intergenic |
| ACGCGTTCTGTGGCGTTAAC+CGG | 0.381628 | 5.4:-9428933 | None:intergenic |
| CGGAACCCTTAAACCCTTAC+CGG | 0.384595 | 5.4:+9428726 | MS.gene015235:CDS |
| AAAGTCCGGTTCATGAGTTC+TGG | 0.390533 | 5.4:+9428847 | MS.gene015235:CDS |
| TATTACGCCCTTGTATTCAA+TGG | 0.394479 | 5.4:+9428325 | MS.gene015235:CDS |
| AAGTCCGACAGCACCGTTAA+CGG | 0.413291 | 5.4:-9428647 | None:intergenic |
| AAACTCCGGTAAGGGTTTAA+GGG | 0.432686 | 5.4:-9428731 | None:intergenic |
| AAACCCTTACCGGAGTTTCT+CGG | 0.442329 | 5.4:+9428736 | MS.gene015235:CDS |
| CGGTTGCCGTGTCCTTAGAA+AGG | 0.456637 | 5.4:+9428284 | MS.gene015235:CDS |
| GGTGGTAAACGCAAGCGATC+AGG | 0.465080 | 5.4:+9428868 | MS.gene015235:CDS |
| TACCACCAGAACTCATGAAC+CGG | 0.478203 | 5.4:-9428852 | None:intergenic |
| ATGAACCGGACTTTCTGGTT+CGG | 0.483553 | 5.4:-9428838 | None:intergenic |
| AGCACCGTTAACGGGGTTCA+CGG | 0.485215 | 5.4:-9428638 | None:intergenic |
| TGTGACGACGGTGACGTGCT+TGG | 0.492180 | 5.4:+9429020 | MS.gene015235:CDS |
| TGGCATGACCTTGAGCTTCA+GGG | 0.492713 | 5.4:-9428356 | None:intergenic |
| CGGAGGGAAATTCGCCGGCC+GGG | 0.499369 | 5.4:+9428970 | MS.gene015235:CDS |
| AGAACCGTGAACCCCGTTAA+CGG | 0.510533 | 5.4:+9428634 | MS.gene015235:CDS |
| CCGGAGGGAAATTCGCCGGC+CGG | 0.514516 | 5.4:+9428969 | MS.gene015235:CDS |
| GTGTCAAGCGGCGGTTGAAA+CGG | 0.518728 | 5.4:+9428693 | MS.gene015235:CDS |
| TTACCAGGTCTCTGTGGTGA+AGG | 0.520683 | 5.4:-9428438 | None:intergenic |
| GGTTGCCGTGTCCTTAGAAA+GGG | 0.520856 | 5.4:+9428285 | MS.gene015235:CDS |
| CGTTAGAAATGAAAGACATA+AGG | 0.526325 | 5.4:-9428413 | None:intergenic |
| GCGTCTAAACCGAGAAACTC+CGG | 0.534500 | 5.4:-9428745 | None:intergenic |
| GAGATCCGAACCAGAAAGTC+CGG | 0.539752 | 5.4:+9428833 | MS.gene015235:CDS |
| TCATCGACGGTGTTCCCGGC+CGG | 0.542141 | 5.4:-9428984 | None:intergenic |
| ACGGTGACGTGCTTGGAAAG+TGG | 0.543942 | 5.4:+9429027 | MS.gene015235:CDS |
| GTATCGATCCATTGAATACA+AGG | 0.548656 | 5.4:-9428333 | None:intergenic |
| CGGTGACGTGCTTGGAAAGT+GGG | 0.551329 | 5.4:+9429028 | MS.gene015235:CDS |
| TACCAGGTCTCTGTGGTGAA+GGG | 0.560196 | 5.4:-9428437 | None:intergenic |
| TTCTGAGGAATCTGTGACGA+CGG | 0.564218 | 5.4:+9429008 | MS.gene015235:CDS |
| TGCTTGGAAAGTGGGATCGG+AGG | 0.566383 | 5.4:+9429036 | MS.gene015235:CDS |
| AAACCGAGAAACTCCGGTAA+GGG | 0.570584 | 5.4:-9428739 | None:intergenic |
| TAAACCGAGAAACTCCGGTA+AGG | 0.571879 | 5.4:-9428740 | None:intergenic |
| CCGTTGGTCAACGCGTTCTG+TGG | 0.575430 | 5.4:-9428943 | None:intergenic |
| GTTTCCGGAGGGAAATTCGC+CGG | 0.577846 | 5.4:+9428965 | MS.gene015235:CDS |
| AATTTCCCTCCGGAAACCGT+TGG | 0.583258 | 5.4:-9428959 | None:intergenic |
| ACCGTTGATGACTCATCTGA+AGG | 0.585962 | 5.4:+9428778 | MS.gene015235:CDS |
| ACGTGCTTGGAAAGTGGGAT+CGG | 0.586938 | 5.4:+9429033 | MS.gene015235:CDS |
| CCGGCCGGCGAATTTCCCTC+CGG | 0.587093 | 5.4:-9428969 | None:intergenic |
| AACCCCGTTAACGGTGCTGT+CGG | 0.588780 | 5.4:+9428643 | MS.gene015235:CDS |
| GTCCCTTCACCACAGAGACC+TGG | 0.592710 | 5.4:+9428435 | MS.gene015235:CDS |
| AGATTAAGATCAGTCGTCGC+CGG | 0.593377 | 5.4:-9428910 | None:intergenic |
| TCCTTCAGATGAGTCATCAA+CGG | 0.596231 | 5.4:-9428779 | None:intergenic |
| CGACGACTGATCTTAATCTC+CGG | 0.598907 | 5.4:+9428914 | MS.gene015235:CDS |
| AAGTCACGTGCAACGACGCG+CGG | 0.599047 | 5.4:+9428803 | MS.gene015235:CDS |
| CGTTGACCAACGGTTTCCGG+AGG | 0.601993 | 5.4:+9428953 | MS.gene015235:CDS |
| CCACAGAACGCGTTGACCAA+CGG | 0.603462 | 5.4:+9428943 | MS.gene015235:CDS |
| AGGGTTTAAGGGTTCCGCCA+CGG | 0.607346 | 5.4:-9428720 | None:intergenic |
| GGCATGACCTTGAGCTTCAG+GGG | 0.607961 | 5.4:-9428355 | None:intergenic |
| TACAACCCTTTCTAAGGACA+CGG | 0.609661 | 5.4:-9428290 | None:intergenic |
| ATCGATACCCCTGAAGCTCA+AGG | 0.611816 | 5.4:+9428348 | MS.gene015235:CDS |
| CAACTAGGTATGAGTTGCAA+CGG | 0.621586 | 5.4:+9428264 | None:intergenic |
| GTCCGGTTCATGAGTTCTGG+TGG | 0.622596 | 5.4:+9428850 | MS.gene015235:CDS |
| TGAAAGACATAAGGTCAGCA+CGG | 0.634887 | 5.4:-9428404 | None:intergenic |
| GTCCGACAGCACCGTTAACG+GGG | 0.636214 | 5.4:-9428645 | None:intergenic |
| GTTGAAACGGTGCTCCGTGG+CGG | 0.644097 | 5.4:+9428706 | MS.gene015235:CDS |
| AAACTGGCACGTGTGTCAAG+CGG | 0.645348 | 5.4:+9428681 | MS.gene015235:CDS |
| GTTGACCAACGGTTTCCGGA+GGG | 0.646523 | 5.4:+9428954 | MS.gene015235:CDS |
| CTGGCACGTGTGTCAAGCGG+CGG | 0.654365 | 5.4:+9428684 | MS.gene015235:CDS |
| TTCAGATGAGTCATCAACGG+TGG | 0.656087 | 5.4:-9428776 | None:intergenic |
| GCGGTTGAAACGGTGCTCCG+TGG | 0.657002 | 5.4:+9428703 | MS.gene015235:CDS |
| GATTATTTACCAGGTCTCTG+TGG | 0.665083 | 5.4:-9428444 | None:intergenic |
| TCTTTGTTGTTTGAAGCGTG+TGG | 0.669278 | 5.4:+9428610 | MS.gene015235:CDS |
| GATTCCTCAGAATTCATCGA+CGG | 0.685600 | 5.4:-9428997 | None:intergenic |
| TATCGATCCATTGAATACAA+GGG | 0.699979 | 5.4:-9428332 | None:intergenic |
| AACACCGTCGATGAATTCTG+AGG | 0.704407 | 5.4:+9428993 | MS.gene015235:CDS |
| AAACTTGGCTACAAAGACAG+TGG | 0.714204 | 5.4:-9428376 | None:intergenic |
| GGAGATAACTACGTTCACGA+CGG | 0.740228 | 5.4:+9429057 | MS.gene015235:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | GAAGATAAAGATTATTTACC+AGG | - | chr5.4:9428456-9428475 | None:intergenic | 25.0% |
| ! | TAGATGAACTAAACTAACTA+AGG | + | chr5.4:9428556-9428575 | MS.gene015235:intron | 25.0% |
| CGTTAGAAATGAAAGACATA+AGG | - | chr5.4:9428416-9428435 | None:intergenic | 30.0% | |
| TATCGATCCATTGAATACAA+GGG | - | chr5.4:9428335-9428354 | None:intergenic | 30.0% | |
| CAAAAAGGTTGAGAACTTTG+CGG | - | chr5.4:9429086-9429105 | None:intergenic | 35.0% | |
| TATTACGCCCTTGTATTCAA+TGG | + | chr5.4:9428325-9428344 | MS.gene015235:CDS | 35.0% | |
| ! | GTATCGATCCATTGAATACA+AGG | - | chr5.4:9428336-9428355 | None:intergenic | 35.0% |
| ! | GTCTTTGTAGCCAAGTTTTT+CGG | + | chr5.4:9428381-9428400 | MS.gene015235:CDS | 35.0% |
| ! | TTAGAGTGAAAGTGTAACTG+TGG | - | chr5.4:9428490-9428509 | None:intergenic | 35.0% |
| AAACTCCGGTAAGGGTTTAA+GGG | - | chr5.4:9428734-9428753 | None:intergenic | 40.0% | |
| AAACTTGGCTACAAAGACAG+TGG | - | chr5.4:9428379-9428398 | None:intergenic | 40.0% | |
| ACTCACTACAACCCTTTCTA+AGG | - | chr5.4:9428299-9428318 | None:intergenic | 40.0% | |
| GATTATTTACCAGGTCTCTG+TGG | - | chr5.4:9428447-9428466 | None:intergenic | 40.0% | |
| GATTCCTCAGAATTCATCGA+CGG | - | chr5.4:9429000-9429019 | None:intergenic | 40.0% | |
| TCCTTCAGATGAGTCATCAA+CGG | - | chr5.4:9428782-9428801 | None:intergenic | 40.0% | |
| TGAAAGACATAAGGTCAGCA+CGG | - | chr5.4:9428407-9428426 | None:intergenic | 40.0% | |
| ! | TACAACCCTTTCTAAGGACA+CGG | - | chr5.4:9428293-9428312 | None:intergenic | 40.0% |
| !! | TCTTTGTTGTTTGAAGCGTG+TGG | + | chr5.4:9428610-9428629 | MS.gene015235:CDS | 40.0% |
| !!! | TGCTGAAGTTTTGAAGCTTC+CGG | + | chr5.4:9428891-9428910 | MS.gene015235:CDS | 40.0% |
| AAACCCTTACCGGAGTTTCT+CGG | + | chr5.4:9428736-9428755 | MS.gene015235:CDS | 45.0% | |
| AAACCGAGAAACTCCGGTAA+GGG | - | chr5.4:9428742-9428761 | None:intergenic | 45.0% | |
| AAAGTCCGGTTCATGAGTTC+TGG | + | chr5.4:9428847-9428866 | MS.gene015235:CDS | 45.0% | |
| AACACCGTCGATGAATTCTG+AGG | + | chr5.4:9428993-9429012 | MS.gene015235:CDS | 45.0% | |
| AACTCATGAACCGGACTTTC+TGG | - | chr5.4:9428846-9428865 | None:intergenic | 45.0% | |
| AGATTAAGATCAGTCGTCGC+CGG | - | chr5.4:9428913-9428932 | None:intergenic | 45.0% | |
| CGACGACTGATCTTAATCTC+CGG | + | chr5.4:9428914-9428933 | MS.gene015235:CDS | 45.0% | |
| GAAACTCCGGTAAGGGTTTA+AGG | - | chr5.4:9428735-9428754 | None:intergenic | 45.0% | |
| GGAGATAACTACGTTCACGA+CGG | + | chr5.4:9429057-9429076 | MS.gene015235:CDS | 45.0% | |
| TAAACCGAGAAACTCCGGTA+AGG | - | chr5.4:9428743-9428762 | None:intergenic | 45.0% | |
| TACCACCAGAACTCATGAAC+CGG | - | chr5.4:9428855-9428874 | None:intergenic | 45.0% | |
| TTCAGATGAGTCATCAACGG+TGG | - | chr5.4:9428779-9428798 | None:intergenic | 45.0% | |
| ! | GACTTTTGTGGACAGGAAAC+TGG | + | chr5.4:9428665-9428684 | MS.gene015235:CDS | 45.0% |
| ! | TTCTGAGGAATCTGTGACGA+CGG | + | chr5.4:9429008-9429027 | MS.gene015235:CDS | 45.0% |
| !! | ACCGTTGATGACTCATCTGA+AGG | + | chr5.4:9428778-9428797 | MS.gene015235:CDS | 45.0% |
| !! | ATGAACCGGACTTTCTGGTT+CGG | - | chr5.4:9428841-9428860 | None:intergenic | 45.0% |
| AAACTGGCACGTGTGTCAAG+CGG | + | chr5.4:9428681-9428700 | MS.gene015235:CDS | 50.0% | |
| AAGTCCGACAGCACCGTTAA+CGG | - | chr5.4:9428650-9428669 | None:intergenic | 50.0% | |
| AATTTCCCTCCGGAAACCGT+TGG | - | chr5.4:9428962-9428981 | None:intergenic | 50.0% | |
| ACGTGCTTGGAAAGTGGGAT+CGG | + | chr5.4:9429033-9429052 | MS.gene015235:CDS | 50.0% | |
| AGAACCGTGAACCCCGTTAA+CGG | + | chr5.4:9428634-9428653 | MS.gene015235:CDS | 50.0% | |
| ATCGATACCCCTGAAGCTCA+AGG | + | chr5.4:9428348-9428367 | MS.gene015235:CDS | 50.0% | |
| CGGAACCCTTAAACCCTTAC+CGG | + | chr5.4:9428726-9428745 | MS.gene015235:CDS | 50.0% | |
| GAATTCATCGACGGTGTTCC+CGG | - | chr5.4:9428991-9429010 | None:intergenic | 50.0% | |
| GAGATCCGAACCAGAAAGTC+CGG | + | chr5.4:9428833-9428852 | MS.gene015235:CDS | 50.0% | |
| GCGTCTAAACCGAGAAACTC+CGG | - | chr5.4:9428748-9428767 | None:intergenic | 50.0% | |
| GGTTGCCGTGTCCTTAGAAA+GGG | + | chr5.4:9428285-9428304 | MS.gene015235:CDS | 50.0% | |
| TACCAGGTCTCTGTGGTGAA+GGG | - | chr5.4:9428440-9428459 | None:intergenic | 50.0% | |
| TGGCATGACCTTGAGCTTCA+GGG | - | chr5.4:9428359-9428378 | None:intergenic | 50.0% | |
| TTACCAGGTCTCTGTGGTGA+AGG | - | chr5.4:9428441-9428460 | None:intergenic | 50.0% | |
| !! | GGACTTTCTGGTTCGGATCT+CGG | - | chr5.4:9428834-9428853 | None:intergenic | 50.0% |
| ACGCGTTCTGTGGCGTTAAC+CGG | - | chr5.4:9428936-9428955 | None:intergenic | 55.0% | |
| ACGGTGACGTGCTTGGAAAG+TGG | + | chr5.4:9429027-9429046 | MS.gene015235:CDS | 55.0% | |
| AGCACCGTTAACGGGGTTCA+CGG | - | chr5.4:9428641-9428660 | None:intergenic | 55.0% | |
| AGGGTTTAAGGGTTCCGCCA+CGG | - | chr5.4:9428723-9428742 | None:intergenic | 55.0% | |
| AGTCCGACAGCACCGTTAAC+GGG | - | chr5.4:9428649-9428668 | None:intergenic | 55.0% | |
| CGGTGACGTGCTTGGAAAGT+GGG | + | chr5.4:9429028-9429047 | MS.gene015235:CDS | 55.0% | |
| CGGTTGCCGTGTCCTTAGAA+AGG | + | chr5.4:9428284-9428303 | MS.gene015235:CDS | 55.0% | |
| GGCATGACCTTGAGCTTCAG+GGG | - | chr5.4:9428358-9428377 | None:intergenic | 55.0% | |
| GGTGGTAAACGCAAGCGATC+AGG | + | chr5.4:9428868-9428887 | MS.gene015235:CDS | 55.0% | |
| GTCAGCACGGCCGAAAAACT+TGG | - | chr5.4:9428394-9428413 | None:intergenic | 55.0% | |
| GTGGCATGACCTTGAGCTTC+AGG | - | chr5.4:9428360-9428379 | None:intergenic | 55.0% | |
| GTGTCAAGCGGCGGTTGAAA+CGG | + | chr5.4:9428693-9428712 | MS.gene015235:CDS | 55.0% | |
| GTTGACCAACGGTTTCCGGA+GGG | + | chr5.4:9428954-9428973 | MS.gene015235:CDS | 55.0% | |
| GTTTCCGGAGGGAAATTCGC+CGG | + | chr5.4:9428965-9428984 | MS.gene015235:CDS | 55.0% | |
| TGCTTGGAAAGTGGGATCGG+AGG | + | chr5.4:9429036-9429055 | MS.gene015235:CDS | 55.0% | |
| ! | ACGCGTTGACCAACGGTTTC+CGG | + | chr5.4:9428950-9428969 | MS.gene015235:CDS | 55.0% |
| ! | CCACAGAACGCGTTGACCAA+CGG | + | chr5.4:9428943-9428962 | MS.gene015235:CDS | 55.0% |
| ! | GCTGTCGGACTTTTGTGGAC+AGG | + | chr5.4:9428658-9428677 | MS.gene015235:CDS | 55.0% |
| ! | GTCCGGTTCATGAGTTCTGG+TGG | + | chr5.4:9428850-9428869 | MS.gene015235:CDS | 55.0% |
| !! | AACCCCGTTAACGGTGCTGT+CGG | + | chr5.4:9428643-9428662 | MS.gene015235:CDS | 55.0% |
| !!! | ACGGTGCTGTCGGACTTTTG+TGG | + | chr5.4:9428653-9428672 | MS.gene015235:CDS | 55.0% |
| AAGTCACGTGCAACGACGCG+CGG | + | chr5.4:9428803-9428822 | MS.gene015235:CDS | 60.0% | |
| CCGTTGGTCAACGCGTTCTG+TGG | - | chr5.4:9428946-9428965 | None:intergenic | 60.0% | |
| CGTTGACCAACGGTTTCCGG+AGG | + | chr5.4:9428953-9428972 | MS.gene015235:CDS | 60.0% | |
| GTCCCTTCACCACAGAGACC+TGG | + | chr5.4:9428435-9428454 | MS.gene015235:CDS | 60.0% | |
| GTCCGACAGCACCGTTAACG+GGG | - | chr5.4:9428648-9428667 | None:intergenic | 60.0% | |
| GTTGAAACGGTGCTCCGTGG+CGG | + | chr5.4:9428706-9428725 | MS.gene015235:CDS | 60.0% | |
| TGTGACGACGGTGACGTGCT+TGG | + | chr5.4:9429020-9429039 | MS.gene015235:CDS | 60.0% | |
| CTGGCACGTGTGTCAAGCGG+CGG | + | chr5.4:9428684-9428703 | MS.gene015235:CDS | 65.0% | |
| GCGGTTGAAACGGTGCTCCG+TGG | + | chr5.4:9428703-9428722 | MS.gene015235:CDS | 65.0% | |
| TCATCGACGGTGTTCCCGGC+CGG | - | chr5.4:9428987-9429006 | None:intergenic | 65.0% | |
| CCGGAGGGAAATTCGCCGGC+CGG | + | chr5.4:9428969-9428988 | MS.gene015235:CDS | 70.0% | |
| CCGGCCGGCGAATTTCCCTC+CGG | - | chr5.4:9428972-9428991 | None:intergenic | 70.0% | |
| CGGAGGGAAATTCGCCGGCC+GGG | + | chr5.4:9428970-9428989 | MS.gene015235:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 9428273 | 9429110 | 9428273 | ID=MS.gene015235 |
| chr5.4 | mRNA | 9428273 | 9429110 | 9428273 | ID=MS.gene015235.t1;Parent=MS.gene015235 |
| chr5.4 | exon | 9428273 | 9428456 | 9428273 | ID=MS.gene015235.t1.exon1;Parent=MS.gene015235.t1 |
| chr5.4 | CDS | 9428273 | 9428456 | 9428273 | ID=cds.MS.gene015235.t1;Parent=MS.gene015235.t1 |
| chr5.4 | exon | 9428599 | 9429110 | 9428599 | ID=MS.gene015235.t1.exon2;Parent=MS.gene015235.t1 |
| chr5.4 | CDS | 9428599 | 9429110 | 9428599 | ID=cds.MS.gene015235.t1;Parent=MS.gene015235.t1 |
| Gene Sequence |
| Protein sequence |
