Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01533.t1 | XP_003593733.1 | 98.5 | 533 | 8 | 0 | 1 | 533 | 1 | 533 | 0.00E+00 | 1077 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01533.t1 | Q9SKT6 | 79.9 | 536 | 105 | 2 | 1 | 533 | 1 | 536 | 9.7e-257 | 887.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01533.t1 | G7IKA2 | 98.5 | 533 | 8 | 0 | 1 | 533 | 1 | 533 | 0.0e+00 | 1077.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene051724 | MS.gene01533 | PPI |
MS.gene022991 | MS.gene01533 | PPI |
MS.gene027296 | MS.gene01533 | PPI |
MS.gene84430 | MS.gene01533 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01533.t1 | MTR_2g015550 | 98.499 | 533 | 8 | 0 | 1 | 533 | 1 | 533 | 0.0 | 1105 |
MS.gene01533.t1 | MTR_2g006790 | 82.210 | 534 | 69 | 3 | 1 | 533 | 1 | 509 | 0.0 | 900 |
MS.gene01533.t1 | MTR_4g109890 | 56.530 | 536 | 223 | 6 | 1 | 530 | 1 | 532 | 0.0 | 627 |
MS.gene01533.t1 | MTR_2g461670 | 49.745 | 589 | 235 | 7 | 1 | 530 | 1 | 587 | 0.0 | 597 |
MS.gene01533.t1 | MTR_2g027740 | 46.894 | 499 | 257 | 5 | 36 | 533 | 175 | 666 | 2.74e-165 | 484 |
MS.gene01533.t1 | MTR_3g107930 | 49.789 | 474 | 221 | 6 | 67 | 532 | 122 | 586 | 1.06e-160 | 470 |
MS.gene01533.t1 | MTR_3g107930 | 49.789 | 474 | 221 | 6 | 67 | 532 | 199 | 663 | 8.90e-160 | 470 |
MS.gene01533.t1 | MTR_8g092000 | 46.061 | 495 | 247 | 5 | 40 | 533 | 104 | 579 | 1.95e-157 | 461 |
MS.gene01533.t1 | MTR_7g075840 | 48.498 | 466 | 231 | 5 | 70 | 532 | 203 | 662 | 4.86e-155 | 458 |
MS.gene01533.t1 | MTR_8g033360 | 48.387 | 434 | 213 | 4 | 70 | 498 | 170 | 597 | 1.84e-148 | 442 |
MS.gene01533.t1 | MTR_7g055600 | 50.773 | 388 | 185 | 3 | 149 | 532 | 47 | 432 | 2.86e-139 | 409 |
MS.gene01533.t1 | MTR_7g057530 | 50.773 | 388 | 185 | 3 | 149 | 532 | 47 | 432 | 2.86e-139 | 409 |
MS.gene01533.t1 | MTR_6g016380 | 43.004 | 486 | 242 | 10 | 72 | 532 | 78 | 553 | 1.69e-129 | 389 |
MS.gene01533.t1 | MTR_7g012370 | 42.569 | 397 | 198 | 8 | 149 | 521 | 134 | 524 | 3.19e-112 | 344 |
MS.gene01533.t1 | MTR_2g082650 | 39.753 | 405 | 220 | 8 | 149 | 532 | 9 | 410 | 1.58e-110 | 335 |
MS.gene01533.t1 | MTR_2g082650 | 39.753 | 405 | 220 | 8 | 149 | 532 | 138 | 539 | 1.11e-108 | 335 |
MS.gene01533.t1 | MTR_6g013840 | 43.735 | 407 | 199 | 8 | 149 | 531 | 129 | 529 | 2.53e-106 | 328 |
MS.gene01533.t1 | MTR_7g096160 | 37.961 | 461 | 253 | 8 | 77 | 533 | 222 | 653 | 2.28e-103 | 324 |
MS.gene01533.t1 | MTR_4g133570 | 40.204 | 393 | 215 | 7 | 158 | 531 | 70 | 461 | 3.10e-102 | 315 |
MS.gene01533.t1 | MTR_3g452360 | 37.717 | 403 | 236 | 6 | 141 | 530 | 126 | 526 | 1.40e-94 | 298 |
MS.gene01533.t1 | MTR_3g452360 | 38.786 | 379 | 217 | 6 | 165 | 530 | 1 | 377 | 6.71e-94 | 291 |
MS.gene01533.t1 | MTR_1g070490 | 37.149 | 463 | 254 | 10 | 76 | 532 | 166 | 597 | 1.58e-86 | 280 |
MS.gene01533.t1 | MTR_7g012370 | 40.764 | 314 | 159 | 6 | 149 | 441 | 134 | 441 | 2.01e-78 | 254 |
MS.gene01533.t1 | MTR_7g074680 | 30.556 | 468 | 294 | 10 | 72 | 531 | 118 | 562 | 1.63e-58 | 204 |
MS.gene01533.t1 | MTR_7g074680 | 30.556 | 468 | 294 | 10 | 72 | 531 | 158 | 602 | 2.64e-58 | 204 |
MS.gene01533.t1 | MTR_7g074680 | 30.556 | 468 | 294 | 10 | 72 | 531 | 178 | 622 | 4.61e-58 | 204 |
MS.gene01533.t1 | MTR_7g074680 | 30.556 | 468 | 294 | 10 | 72 | 531 | 178 | 622 | 6.52e-58 | 203 |
MS.gene01533.t1 | MTR_7g074680 | 30.556 | 468 | 294 | 10 | 72 | 531 | 198 | 642 | 6.93e-58 | 204 |
MS.gene01533.t1 | MTR_7g074680 | 29.897 | 485 | 292 | 12 | 72 | 531 | 198 | 659 | 2.68e-55 | 197 |
MS.gene01533.t1 | MTR_4g133942 | 50.746 | 201 | 68 | 4 | 337 | 533 | 160 | 333 | 6.06e-54 | 186 |
MS.gene01533.t1 | MTR_3g092310 | 33.182 | 220 | 137 | 6 | 315 | 525 | 117 | 335 | 4.93e-25 | 106 |
MS.gene01533.t1 | MTR_7g109210 | 33.846 | 195 | 120 | 5 | 339 | 524 | 159 | 353 | 2.78e-24 | 104 |
MS.gene01533.t1 | MTR_7g094230 | 33.143 | 175 | 111 | 4 | 339 | 507 | 151 | 325 | 1.81e-22 | 99.4 |
MS.gene01533.t1 | MTR_5g036580 | 26.452 | 310 | 186 | 11 | 224 | 519 | 75 | 356 | 2.25e-22 | 99.8 |
MS.gene01533.t1 | MTR_6g008900 | 31.401 | 207 | 124 | 7 | 339 | 527 | 165 | 371 | 1.41e-21 | 97.1 |
MS.gene01533.t1 | MTR_4g071620 | 31.401 | 207 | 124 | 7 | 339 | 527 | 165 | 371 | 1.41e-21 | 97.1 |
MS.gene01533.t1 | MTR_4g118030 | 29.907 | 214 | 138 | 8 | 315 | 520 | 122 | 331 | 8.34e-21 | 94.4 |
MS.gene01533.t1 | MTR_8g078240 | 32.796 | 186 | 116 | 5 | 339 | 515 | 142 | 327 | 2.54e-20 | 92.8 |
MS.gene01533.t1 | MTR_3g111600 | 31.522 | 184 | 119 | 5 | 339 | 515 | 80 | 263 | 3.73e-19 | 88.2 |
MS.gene01533.t1 | MTR_5g019220 | 30.660 | 212 | 139 | 6 | 311 | 515 | 139 | 349 | 3.35e-18 | 86.7 |
MS.gene01533.t1 | MTR_1g021855 | 31.892 | 185 | 118 | 5 | 339 | 515 | 165 | 349 | 4.98e-18 | 86.3 |
MS.gene01533.t1 | MTR_1g089820 | 30.151 | 199 | 132 | 5 | 315 | 507 | 131 | 328 | 1.28e-15 | 79.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01533.t1 | AT2G20810 | 79.851 | 536 | 105 | 2 | 1 | 533 | 1 | 536 | 0.0 | 878 |
MS.gene01533.t1 | AT1G18580 | 55.410 | 536 | 231 | 5 | 1 | 530 | 1 | 534 | 0.0 | 604 |
MS.gene01533.t1 | AT5G47780 | 48.723 | 470 | 232 | 4 | 65 | 532 | 152 | 614 | 3.20e-167 | 488 |
MS.gene01533.t1 | AT3G61130 | 47.966 | 467 | 233 | 5 | 70 | 533 | 213 | 672 | 6.60e-164 | 481 |
MS.gene01533.t1 | AT4G38270 | 47.899 | 476 | 233 | 7 | 67 | 533 | 206 | 675 | 1.39e-157 | 465 |
MS.gene01533.t1 | AT4G38270 | 47.899 | 476 | 233 | 7 | 67 | 533 | 210 | 679 | 1.62e-157 | 465 |
MS.gene01533.t1 | AT3G25140 | 51.289 | 388 | 183 | 3 | 149 | 532 | 172 | 557 | 1.37e-147 | 435 |
MS.gene01533.t1 | AT2G46480 | 44.048 | 504 | 253 | 10 | 36 | 530 | 53 | 536 | 4.41e-141 | 418 |
MS.gene01533.t1 | AT2G46480 | 44.048 | 504 | 253 | 10 | 36 | 530 | 66 | 549 | 9.30e-141 | 417 |
MS.gene01533.t1 | AT3G02350 | 44.699 | 481 | 241 | 8 | 72 | 532 | 84 | 559 | 1.54e-130 | 392 |
MS.gene01533.t1 | AT2G46480 | 41.071 | 504 | 243 | 11 | 36 | 530 | 53 | 511 | 5.46e-125 | 376 |
MS.gene01533.t1 | AT2G46480 | 41.071 | 504 | 243 | 11 | 36 | 530 | 66 | 524 | 7.98e-125 | 376 |
MS.gene01533.t1 | AT3G01040 | 42.892 | 408 | 203 | 8 | 148 | 531 | 128 | 529 | 2.26e-113 | 347 |
MS.gene01533.t1 | AT3G01040 | 42.892 | 408 | 203 | 8 | 148 | 531 | 128 | 529 | 2.26e-113 | 347 |
MS.gene01533.t1 | AT5G15470 | 42.157 | 408 | 206 | 8 | 148 | 531 | 128 | 529 | 3.34e-109 | 336 |
MS.gene01533.t1 | AT2G30575 | 36.419 | 497 | 276 | 8 | 41 | 533 | 149 | 609 | 7.83e-109 | 337 |
MS.gene01533.t1 | AT5G54690 | 38.806 | 402 | 226 | 8 | 150 | 532 | 132 | 532 | 2.34e-106 | 328 |
MS.gene01533.t1 | AT1G06780 | 37.931 | 493 | 267 | 10 | 45 | 533 | 131 | 588 | 2.68e-105 | 328 |
MS.gene01533.t1 | AT1G06780 | 37.931 | 493 | 267 | 10 | 45 | 533 | 144 | 601 | 3.47e-105 | 328 |
MS.gene01533.t1 | AT3G01040 | 39.951 | 408 | 182 | 9 | 148 | 531 | 128 | 496 | 7.28e-98 | 305 |
MS.gene01533.t1 | AT3G58790 | 38.875 | 391 | 218 | 8 | 159 | 530 | 16 | 404 | 6.71e-89 | 279 |
MS.gene01533.t1 | AT3G58790 | 37.063 | 429 | 241 | 10 | 122 | 530 | 117 | 536 | 1.37e-87 | 280 |
MS.gene01533.t1 | AT2G38650 | 32.265 | 468 | 285 | 9 | 72 | 533 | 177 | 618 | 4.17e-65 | 223 |
MS.gene01533.t1 | AT2G38650 | 32.265 | 468 | 285 | 9 | 72 | 533 | 177 | 618 | 4.17e-65 | 223 |
MS.gene01533.t1 | AT2G38650 | 31.565 | 377 | 227 | 8 | 72 | 443 | 177 | 527 | 2.71e-44 | 164 |
MS.gene01533.t1 | AT1G70090 | 25.868 | 317 | 193 | 10 | 224 | 526 | 78 | 366 | 1.69e-24 | 105 |
MS.gene01533.t1 | AT1G70090 | 25.868 | 317 | 193 | 10 | 224 | 526 | 78 | 366 | 1.69e-24 | 105 |
MS.gene01533.t1 | AT1G24170 | 25.552 | 317 | 194 | 11 | 224 | 526 | 81 | 369 | 4.94e-21 | 95.9 |
MS.gene01533.t1 | AT4G02130 | 30.102 | 196 | 128 | 5 | 339 | 525 | 150 | 345 | 1.11e-20 | 94.0 |
MS.gene01533.t1 | AT4G02130 | 30.102 | 196 | 128 | 5 | 339 | 525 | 150 | 345 | 1.11e-20 | 94.0 |
MS.gene01533.t1 | AT4G02130 | 30.102 | 196 | 128 | 5 | 339 | 525 | 150 | 345 | 1.11e-20 | 94.0 |
MS.gene01533.t1 | AT3G62660 | 26.962 | 293 | 171 | 9 | 242 | 524 | 99 | 358 | 1.59e-20 | 93.6 |
MS.gene01533.t1 | AT1G02720 | 27.302 | 315 | 189 | 10 | 222 | 525 | 75 | 360 | 3.17e-20 | 92.8 |
MS.gene01533.t1 | AT1G02720 | 27.302 | 315 | 189 | 10 | 222 | 525 | 75 | 360 | 3.17e-20 | 92.8 |
MS.gene01533.t1 | AT3G28340 | 25.965 | 285 | 174 | 10 | 239 | 515 | 84 | 339 | 4.82e-20 | 92.4 |
MS.gene01533.t1 | AT1G19300 | 31.522 | 184 | 119 | 5 | 339 | 515 | 150 | 333 | 6.64e-20 | 91.7 |
MS.gene01533.t1 | AT3G06260 | 29.787 | 188 | 124 | 5 | 339 | 520 | 150 | 335 | 1.45e-19 | 90.9 |
MS.gene01533.t1 | AT1G13250 | 32.787 | 183 | 117 | 4 | 339 | 515 | 144 | 326 | 3.58e-18 | 86.7 |
MS.gene01533.t1 | AT3G50760 | 25.436 | 287 | 174 | 8 | 239 | 515 | 66 | 322 | 5.83e-17 | 82.8 |
Find 108 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTAAGCATGGACAGATATTT+AGG | 0.176518 | 2.2:+67830140 | None:intergenic |
CTTTCCACCATCACTGTTTC+CGG | 0.176992 | 2.2:+67830184 | None:intergenic |
TCTGATTCTATAGTTGTTAA+AGG | 0.192776 | 2.2:+67830767 | None:intergenic |
GATTTGAATGGGAATGTTAA+TGG | 0.254551 | 2.2:-67830011 | MS.gene01533:CDS |
ACATCTCTTCGGTAATATTA+AGG | 0.257268 | 2.2:+67830954 | None:intergenic |
CACTTAGTTCCCAAGCAAAT+TGG | 0.261830 | 2.2:+67830843 | None:intergenic |
GATGCATGCGGATGGGCATT+TGG | 0.261833 | 2.2:-67829900 | MS.gene01533:CDS |
GAGAATAGTTCAAGTATTTA+TGG | 0.277457 | 2.2:+67829952 | None:intergenic |
GGATCCATCGTGGCATGTAC+TGG | 0.298222 | 2.2:-67829727 | MS.gene01533:CDS |
CCTGAAGAAGATCGTGTTCC+TGG | 0.305211 | 2.2:-67830081 | MS.gene01533:CDS |
GCAAGTGGAGATGAAGATTA+AGG | 0.308264 | 2.2:-67830489 | MS.gene01533:CDS |
CCAAACCTTGGTTGAAGATT+GGG | 0.323300 | 2.2:-67829635 | MS.gene01533:CDS |
TCGTGGCATGTACTGGGTTT+TGG | 0.330769 | 2.2:-67829720 | MS.gene01533:CDS |
CCAGGAACACGATCTTCTTC+AGG | 0.343617 | 2.2:+67830081 | None:intergenic |
AGTGAAAAGAGTTCAAAATA+TGG | 0.351614 | 2.2:-67830620 | MS.gene01533:CDS |
CCCAATCTTCAACCAAGGTT+TGG | 0.377804 | 2.2:+67829635 | None:intergenic |
TCCAAACCTTGGTTGAAGAT+TGG | 0.380861 | 2.2:-67829636 | MS.gene01533:CDS |
TAAGCATGGACAGATATTTA+GGG | 0.391103 | 2.2:+67830141 | None:intergenic |
TCATCTGTTCTTCAAGAGCT+TGG | 0.400022 | 2.2:+67830651 | None:intergenic |
ATGCATGCGGATGGGCATTT+GGG | 0.402621 | 2.2:-67829899 | MS.gene01533:CDS |
AAAGTTGCATTGCTGCAATA+AGG | 0.409846 | 2.2:+67829563 | None:intergenic |
TCATAGTTGCACTGTCATAA+TGG | 0.413392 | 2.2:+67830696 | None:intergenic |
TTAGGGTTACGAAACTTGAT+AGG | 0.418201 | 2.2:+67830158 | None:intergenic |
GCTTATACTGTCTGGGTGTC+CGG | 0.419318 | 2.2:-67830568 | MS.gene01533:CDS |
TATCTGATCATTAAGTTGTC+TGG | 0.431525 | 2.2:+67830913 | None:intergenic |
TAACTGGCATCTACCACTAT+TGG | 0.432849 | 2.2:-67829836 | MS.gene01533:CDS |
CACCCCACGAAAGTCATTCA+TGG | 0.437582 | 2.2:+67830310 | None:intergenic |
TTACAACAAAAGCTTTAGCT+AGG | 0.438992 | 2.2:+67830888 | None:intergenic |
GTAACAATCTCCAATTTGCT+TGG | 0.440025 | 2.2:-67830853 | MS.gene01533:CDS |
AGACAGTGCTATCCGAGATA+TGG | 0.444268 | 2.2:-67830747 | MS.gene01533:CDS |
TGAACCATTCAGTTGTCAAC+CGG | 0.445715 | 2.2:+67830549 | None:intergenic |
GGGGCTGTACTGCACTTCAA+TGG | 0.449476 | 2.2:-67829663 | MS.gene01533:CDS |
AATGCCCATCCGCATGCATC+GGG | 0.461211 | 2.2:+67829903 | None:intergenic |
TAACAATCTCCAATTTGCTT+GGG | 0.461680 | 2.2:-67830852 | MS.gene01533:CDS |
CCATAAAATGTTAATAATCC+AGG | 0.463302 | 2.2:+67829765 | None:intergenic |
TTATGGACTAACAGAACCCT+TGG | 0.463314 | 2.2:-67829748 | MS.gene01533:CDS |
AAACTCGGCACTTTGCCACC+TGG | 0.467528 | 2.2:-67829783 | MS.gene01533:CDS |
TCAAAATGAGCTCTTATAAG+AGG | 0.468247 | 2.2:+67829927 | None:intergenic |
AAAAGAAATTGAAGGACAAA+AGG | 0.469978 | 2.2:-67830511 | MS.gene01533:CDS |
GGGCTGTACTGCACTTCAAT+GGG | 0.475347 | 2.2:-67829662 | MS.gene01533:CDS |
AACACGATCTTCTTCAGGGC+AGG | 0.482498 | 2.2:+67830086 | None:intergenic |
AATGCCCACCACAATGCATC+AGG | 0.482629 | 2.2:+67832128 | None:intergenic |
TCAGGAACCCTTCTCCGTAC+TGG | 0.487778 | 2.2:+67832146 | None:intergenic |
CATAATGGAGCTGCTGAGCC+TGG | 0.490002 | 2.2:+67830711 | None:intergenic |
GATCCATCGTGGCATGTACT+GGG | 0.492139 | 2.2:-67829726 | MS.gene01533:CDS |
TTCGAAGGCCAGTACGGAGA+AGG | 0.494054 | 2.2:-67832154 | MS.gene01533:CDS |
AGACTCAATTTGAGTCCCTC+TGG | 0.504318 | 2.2:+67832067 | None:intergenic |
AAATGCCCATCCGCATGCAT+CGG | 0.506827 | 2.2:+67829902 | None:intergenic |
TGTCCATGCTTAACCACTTG+AGG | 0.508743 | 2.2:-67830130 | MS.gene01533:CDS |
GAACCACGACGTCATCGTCC+AGG | 0.514466 | 2.2:+67830063 | None:intergenic |
CGATGACGTCGTGGTTCAGA+AGG | 0.515338 | 2.2:-67830057 | MS.gene01533:CDS |
GTCGGAACTTAACATCTCTT+CGG | 0.519106 | 2.2:+67830943 | None:intergenic |
CAATTTGCAAAAGAAATTGA+AGG | 0.524075 | 2.2:-67830519 | MS.gene01533:CDS |
TTGCCATGAATGACTTTCGT+GGG | 0.524242 | 2.2:-67830313 | MS.gene01533:CDS |
TTGATCCCGATGCATGCGGA+TGG | 0.524271 | 2.2:-67829908 | MS.gene01533:CDS |
CAGGAACACGATCTTCTTCA+GGG | 0.526754 | 2.2:+67830082 | None:intergenic |
TCAATCCCAATCTTCAACCA+AGG | 0.528594 | 2.2:+67829630 | None:intergenic |
AATAAATTATGCTTCGATGA+AGG | 0.529408 | 2.2:-67830342 | MS.gene01533:CDS |
AGAACACACAAAAGTGGTAA+AGG | 0.533513 | 2.2:+67830459 | None:intergenic |
GATCCTCAGTTGATAGAAAG+AGG | 0.537753 | 2.2:-67829684 | MS.gene01533:CDS |
TATGGCTTTATTGTTATACC+AGG | 0.538758 | 2.2:-67830729 | MS.gene01533:CDS |
TACATGCCACGATGGATCCA+AGG | 0.541821 | 2.2:+67829731 | None:intergenic |
TACAACAAAAGCTTTAGCTA+GGG | 0.546643 | 2.2:+67830889 | None:intergenic |
GTCTAGACCGCCTTTGTCCA+AGG | 0.549937 | 2.2:-67832048 | MS.gene01533:intron |
TCTTGAAGTTGCTTAAGCAC+AGG | 0.555450 | 2.2:+67830233 | None:intergenic |
TCGAAGGCCAGTACGGAGAA+GGG | 0.558622 | 2.2:-67832153 | MS.gene01533:CDS |
AGAAGTATGAAGACTTCTCA+TGG | 0.559312 | 2.2:-67830274 | MS.gene01533:CDS |
GCAATAAATACCTTGGACAA+AGG | 0.564738 | 2.2:+67832038 | None:intergenic |
TGGCATCTACCACTATTGGC+AGG | 0.567517 | 2.2:-67829832 | MS.gene01533:CDS |
ATAACAATAAAGCCATATCT+CGG | 0.568216 | 2.2:+67830735 | None:intergenic |
TGATCCCGATGCATGCGGAT+GGG | 0.570203 | 2.2:-67829907 | MS.gene01533:CDS |
TATCAGAGAACACACAAAAG+TGG | 0.570397 | 2.2:+67830453 | None:intergenic |
TCAATGGGAACTCCAAACCT+TGG | 0.574241 | 2.2:-67829647 | MS.gene01533:CDS |
AAACCTCAAGTGGTTAAGCA+TGG | 0.583737 | 2.2:+67830127 | None:intergenic |
ATCCTCAGTTGATAGAAAGA+GGG | 0.587849 | 2.2:-67829683 | MS.gene01533:CDS |
AGAGAAGAATCTGTGAATTG+CGG | 0.590485 | 2.2:+67830813 | None:intergenic |
CAGGGATATAAAACCTCAAG+TGG | 0.591983 | 2.2:+67830117 | None:intergenic |
GGCAGGAAAAGAATGTAGAT+CGG | 0.596579 | 2.2:-67829815 | MS.gene01533:CDS |
TTCAAAATATGGACAAATAG+CGG | 0.597495 | 2.2:-67830609 | MS.gene01533:CDS |
TTCTCTCAAATGCTGCCACT+AGG | 0.598229 | 2.2:-67830796 | MS.gene01533:CDS |
AGAATGTAGATCGGACATTG+TGG | 0.600112 | 2.2:-67829806 | MS.gene01533:CDS |
GGTTCCTGATGCATTGTGGT+GGG | 0.606322 | 2.2:-67832132 | MS.gene01533:CDS |
TTATCTATATTCTCACCAGA+GGG | 0.611948 | 2.2:-67832082 | MS.gene01533:CDS |
TGACTTTCGTGGGGTGACTG+TGG | 0.614040 | 2.2:-67830303 | MS.gene01533:CDS |
ATTGAAGGACAAAAGGCAAG+TGG | 0.619661 | 2.2:-67830504 | MS.gene01533:CDS |
AATTTATTTCATCAGTGACA+AGG | 0.620020 | 2.2:+67830357 | None:intergenic |
GATCGGACATTGTGGAAACT+CGG | 0.627650 | 2.2:-67829798 | MS.gene01533:CDS |
ACATGCCACGATGGATCCAA+GGG | 0.630341 | 2.2:+67829732 | None:intergenic |
TTTGCCATGAATGACTTTCG+TGG | 0.634111 | 2.2:-67830314 | MS.gene01533:CDS |
TTTATCTATATTCTCACCAG+AGG | 0.634229 | 2.2:-67832083 | MS.gene01533:CDS |
AAGTTGTCTGGTCACCGAGT+CGG | 0.637832 | 2.2:+67830925 | None:intergenic |
GGGTTCCTGATGCATTGTGG+TGG | 0.643605 | 2.2:-67832133 | MS.gene01533:CDS |
TCCTCAGTTGATAGAAAGAG+GGG | 0.645815 | 2.2:-67829682 | MS.gene01533:CDS |
CTTTCGTGGGGTGACTGTGG+AGG | 0.651957 | 2.2:-67830300 | MS.gene01533:CDS |
CATCATTGCAACTTCAGTCG+TGG | 0.652388 | 2.2:-67830429 | MS.gene01533:CDS |
ATAAATACCTTGGACAAAGG+CGG | 0.654401 | 2.2:+67832041 | None:intergenic |
ATTATGCTTCGATGAAGGCG+TGG | 0.658411 | 2.2:-67830337 | MS.gene01533:CDS |
TGCCATGAATGACTTTCGTG+GGG | 0.659273 | 2.2:-67830312 | MS.gene01533:CDS |
TGGAGCTGTTGAGACATGCA+TGG | 0.666652 | 2.2:-67829991 | MS.gene01533:CDS |
TAAAATGTTAATAATCCAGG+TGG | 0.669793 | 2.2:+67829768 | None:intergenic |
GTGTCCGGTTGACAACTGAA+TGG | 0.675940 | 2.2:-67830553 | MS.gene01533:CDS |
GAAGGGTTCCTGATGCATTG+TGG | 0.677895 | 2.2:-67832136 | MS.gene01533:CDS |
GCCCCTCTTTCTATCAACTG+AGG | 0.679282 | 2.2:+67829681 | None:intergenic |
AGAGATGTTAAGTTCCGACT+CGG | 0.681244 | 2.2:-67830939 | MS.gene01533:CDS |
GTTCCTGGACGATGACGTCG+TGG | 0.688675 | 2.2:-67830066 | MS.gene01533:CDS |
AAACCCAGTACATGCCACGA+TGG | 0.692978 | 2.2:+67829723 | None:intergenic |
TGTTAAAGGAGAACGCCTAG+TGG | 0.708696 | 2.2:+67830781 | None:intergenic |
CAGAACCCTTGGATCCATCG+TGG | 0.734059 | 2.2:-67829737 | MS.gene01533:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTATATCTTCATTATTATT+GGG | - | chr2.2:67830654-67830673 | MS.gene01533:CDS | 10.0% |
!! | TATAATTTCATTTATAGTAT+TGG | - | chr2.2:67830526-67830545 | MS.gene01533:CDS | 10.0% |
!! | ATCATAAATGAAAAATGAAA+AGG | + | chr2.2:67830006-67830025 | None:intergenic | 15.0% |
!! | CATTATATCTTCATTATTAT+TGG | - | chr2.2:67830653-67830672 | MS.gene01533:CDS | 15.0% |
!! | TATGATTGAATAATCTTTAT+TGG | - | chr2.2:67830020-67830039 | MS.gene01533:CDS | 15.0% |
!! | TTACAAAAATAATAGGATTA+TGG | - | chr2.2:67830752-67830771 | MS.gene01533:CDS | 15.0% |
!! | TTATATCTTCATTATTATTG+GGG | - | chr2.2:67830655-67830674 | MS.gene01533:CDS | 15.0% |
!!! | TTTTTTCAATTGATTTGAAT+GGG | - | chr2.2:67831711-67831730 | MS.gene01533:intron | 15.0% |
!! | AAAAATAATAGGATTATGGA+AGG | - | chr2.2:67830756-67830775 | MS.gene01533:CDS | 20.0% |
!! | AATTTCATTTCTATTTGGAA+GGG | - | chr2.2:67829766-67829785 | MS.gene01533:CDS | 20.0% |
!! | AGAGAACTTACAAAAATAAT+AGG | - | chr2.2:67830745-67830764 | MS.gene01533:CDS | 20.0% |
!! | ATAGAAATGAAATTACTACA+TGG | + | chr2.2:67829760-67829779 | None:intergenic | 20.0% |
!! | GTAGTAATTTCATTTCTATT+TGG | - | chr2.2:67829761-67829780 | MS.gene01533:CDS | 20.0% |
!! | TAATTTCATTTCTATTTGGA+AGG | - | chr2.2:67829765-67829784 | MS.gene01533:CDS | 20.0% |
!! | TACATTAGAATATTTCCAAA+GGG | - | chr2.2:67830090-67830109 | MS.gene01533:CDS | 20.0% |
!! | TAGAAATGAAATTACTACAT+GGG | + | chr2.2:67829759-67829778 | None:intergenic | 20.0% |
!! | TATATCTTCATTATTATTGG+GGG | - | chr2.2:67830656-67830675 | MS.gene01533:CDS | 20.0% |
!!! | AATATCAATCAGAGTTTTAA+TGG | - | chr2.2:67830116-67830135 | MS.gene01533:CDS | 20.0% |
!!! | AGTTTTAATGGCTAATAATA+TGG | - | chr2.2:67830128-67830147 | MS.gene01533:CDS | 20.0% |
!!! | ATTAGTTTTTCTCTATAGTA+CGG | + | chr2.2:67830483-67830502 | None:intergenic | 20.0% |
!!! | CTTTTTTCAATTGATTTGAA+TGG | - | chr2.2:67831710-67831729 | MS.gene01533:intron | 20.0% |
! | AAAAGAAATTGAAGGACAAA+AGG | - | chr2.2:67831222-67831241 | MS.gene01533:intron | 25.0% |
! | AAGAAGTTATTAGCTAAACA+AGG | + | chr2.2:67830711-67830730 | None:intergenic | 25.0% |
! | AATAAATTATGCTTCGATGA+AGG | - | chr2.2:67831391-67831410 | MS.gene01533:intron | 25.0% |
! | AATTTATTTCATCAGTGACA+AGG | + | chr2.2:67831379-67831398 | None:intergenic | 25.0% |
! | AGTGAAAAGAGTTCAAAATA+TGG | - | chr2.2:67831113-67831132 | MS.gene01533:intron | 25.0% |
! | ATAACAATAAAGCCATATCT+CGG | + | chr2.2:67831001-67831020 | None:intergenic | 25.0% |
! | CAATTTGCAAAAGAAATTGA+AGG | - | chr2.2:67831214-67831233 | MS.gene01533:intron | 25.0% |
! | CCATAAAATGTTAATAATCC+AGG | + | chr2.2:67831971-67831990 | None:intergenic | 25.0% |
! | CTACATTAGAATATTTCCAA+AGG | - | chr2.2:67830089-67830108 | MS.gene01533:CDS | 25.0% |
! | GAGAATAGTTCAAGTATTTA+TGG | + | chr2.2:67831784-67831803 | None:intergenic | 25.0% |
! | TAAAATGTTAATAATCCAGG+TGG | + | chr2.2:67831968-67831987 | None:intergenic | 25.0% |
! | TCTGATTCTATAGTTGTTAA+AGG | + | chr2.2:67830969-67830988 | None:intergenic | 25.0% |
! | TTACAATCTCAACATTTAGT+TGG | - | chr2.2:67829866-67829885 | MS.gene01533:CDS | 25.0% |
! | TTCAAAATATGGACAAATAG+CGG | - | chr2.2:67831124-67831143 | MS.gene01533:intron | 25.0% |
!! | AAATTCTAAAAATCCCAACA+TGG | - | chr2.2:67831343-67831362 | MS.gene01533:intron | 25.0% |
!! | AATCAATATGTTTTTCCCAT+AGG | + | chr2.2:67832141-67832160 | None:intergenic | 25.0% |
!! | ATCAATATGTTTTTCCCATA+GGG | + | chr2.2:67832140-67832159 | None:intergenic | 25.0% |
!! | ATTGGTAAATGTTTTGCAAT+AGG | - | chr2.2:67830397-67830416 | MS.gene01533:CDS | 25.0% |
!! | CAAGTTTTTAATACATCACA+TGG | - | chr2.2:67830333-67830352 | MS.gene01533:CDS | 25.0% |
!! | CCTGGATTATTAACATTTTA+TGG | - | chr2.2:67831968-67831987 | MS.gene01533:intron | 25.0% |
!! | CTTAAACTTGCTTAAGTAAT+TGG | - | chr2.2:67830584-67830603 | MS.gene01533:CDS | 25.0% |
!! | TCAATTTCTTTTGCAAATTG+AGG | + | chr2.2:67831214-67831233 | None:intergenic | 25.0% |
!!! | ATGTTTTTGATTTGGTTGAA+TGG | - | chr2.2:67831861-67831880 | MS.gene01533:intron | 25.0% |
!!! | TTGGAAATTCATTTTGTTTC+CGG | - | chr2.2:67829947-67829966 | MS.gene01533:CDS | 25.0% |
AAAACTTGCAAAGTGTAAGT+TGG | + | chr2.2:67830321-67830340 | None:intergenic | 30.0% | |
ACATCTCTTCGGTAATATTA+AGG | + | chr2.2:67830782-67830801 | None:intergenic | 30.0% | |
ATATATAGTCAACTAGCACA+TGG | + | chr2.2:67829982-67830001 | None:intergenic | 30.0% | |
CTGATTGATATTATACCCTT+TGG | + | chr2.2:67830108-67830127 | None:intergenic | 30.0% | |
CTTTATTGGATAGAAACAAC+TGG | - | chr2.2:67830034-67830053 | MS.gene01533:CDS | 30.0% | |
GATTTGAATGGGAATGTTAA+TGG | - | chr2.2:67831722-67831741 | MS.gene01533:intron | 30.0% | |
GGAAAAAGCAATAAATACCT+TGG | + | chr2.2:67829705-67829724 | None:intergenic | 30.0% | |
TAAGCATGGACAGATATTTA+GGG | + | chr2.2:67831595-67831614 | None:intergenic | 30.0% | |
TCAAAATGAGCTCTTATAAG+AGG | + | chr2.2:67831809-67831828 | None:intergenic | 30.0% | |
TCAACTCAATAAGTTAGGAT+AGG | - | chr2.2:67829828-67829847 | MS.gene01533:CDS | 30.0% | |
TCAATAAGTTAGGATAGGAT+AGG | - | chr2.2:67829833-67829852 | MS.gene01533:CDS | 30.0% | |
TCACTTCAACTCAATAAGTT+AGG | - | chr2.2:67829823-67829842 | MS.gene01533:CDS | 30.0% | |
TTAAGCATGGACAGATATTT+AGG | + | chr2.2:67831596-67831615 | None:intergenic | 30.0% | |
TTATCTATATTCTCACCAGA+GGG | - | chr2.2:67829651-67829670 | MS.gene01533:CDS | 30.0% | |
TTTATCTATATTCTCACCAG+AGG | - | chr2.2:67829650-67829669 | MS.gene01533:CDS | 30.0% | |
! | CAATTATATGAAGAGCGTAT+TGG | - | chr2.2:67830379-67830398 | MS.gene01533:CDS | 30.0% |
! | TAACAATCTCCAATTTGCTT+GGG | - | chr2.2:67830881-67830900 | MS.gene01533:CDS | 30.0% |
! | TACAACAAAAGCTTTAGCTA+GGG | + | chr2.2:67830847-67830866 | None:intergenic | 30.0% |
! | TATCTGATCATTAAGTTGTC+TGG | + | chr2.2:67830823-67830842 | None:intergenic | 30.0% |
! | TCAATATGTTTTTCCCATAG+GGG | + | chr2.2:67832139-67832158 | None:intergenic | 30.0% |
! | TTACAACAAAAGCTTTAGCT+AGG | + | chr2.2:67830848-67830867 | None:intergenic | 30.0% |
!! | AATTTTCAAGAAGAGAGATC+TGG | + | chr2.2:67829726-67829745 | None:intergenic | 30.0% |
!! | ATACAAAGCTACTACTTTTC+CGG | - | chr2.2:67831530-67831549 | MS.gene01533:intron | 30.0% |
!! | ATGTTTTAAATCCCTATTGC+GGG | - | chr2.2:67830175-67830194 | MS.gene01533:CDS | 30.0% |
!! | GATGTTTTAAATCCCTATTG+CGG | - | chr2.2:67830174-67830193 | MS.gene01533:CDS | 30.0% |
!! | TATGGCTTTATTGTTATACC+AGG | - | chr2.2:67831004-67831023 | MS.gene01533:intron | 30.0% |
!! | TGGGATGAATGTTTTTGATT+TGG | - | chr2.2:67831853-67831872 | MS.gene01533:intron | 30.0% |
!!! | TTTTTGATTTGGTTGAATGG+AGG | - | chr2.2:67831864-67831883 | MS.gene01533:intron | 30.0% |
AAAGTTGCATTGCTGCAATA+AGG | + | chr2.2:67832173-67832192 | None:intergenic | 35.0% | |
AAGGTGAAAAACAACCATGT+TGG | + | chr2.2:67831360-67831379 | None:intergenic | 35.0% | |
AATTGACTAGACTAAACAGC+TGG | - | chr2.2:67829791-67829810 | MS.gene01533:CDS | 35.0% | |
ACCAAAAAGCTTATACTGTC+TGG | - | chr2.2:67831157-67831176 | MS.gene01533:intron | 35.0% | |
AGAACACACAAAAGTGGTAA+AGG | + | chr2.2:67831277-67831296 | None:intergenic | 35.0% | |
AGAGAAGAATCTGTGAATTG+CGG | + | chr2.2:67830923-67830942 | None:intergenic | 35.0% | |
AGGTGAAAAACAACCATGTT+GGG | + | chr2.2:67831359-67831378 | None:intergenic | 35.0% | |
ATAAATACCTTGGACAAAGG+CGG | + | chr2.2:67829695-67829714 | None:intergenic | 35.0% | |
ATAGTATGCTGAGATGATCT+TGG | - | chr2.2:67829928-67829947 | MS.gene01533:CDS | 35.0% | |
CCAAAAAGCTTATACTGTCT+GGG | - | chr2.2:67831158-67831177 | MS.gene01533:intron | 35.0% | |
GCAATAAATACCTTGGACAA+AGG | + | chr2.2:67829698-67829717 | None:intergenic | 35.0% | |
TAGCACATGGTACATAATTC+CGG | + | chr2.2:67829969-67829988 | None:intergenic | 35.0% | |
TATCAGAGAACACACAAAAG+TGG | + | chr2.2:67831283-67831302 | None:intergenic | 35.0% | |
TCATAGTTGCACTGTCATAA+TGG | + | chr2.2:67831040-67831059 | None:intergenic | 35.0% | |
TCATTATTATTGGGGGATAG+AGG | - | chr2.2:67830663-67830682 | MS.gene01533:CDS | 35.0% | |
TGAAAAATACAAGCCCCTAT+GGG | - | chr2.2:67832123-67832142 | MS.gene01533:CDS | 35.0% | |
TGGAGGAAAAAGAATGTAAC+TGG | - | chr2.2:67831881-67831900 | MS.gene01533:intron | 35.0% | |
TTAGGGTTACGAAACTTGAT+AGG | + | chr2.2:67831578-67831597 | None:intergenic | 35.0% | |
TTGAAAAATACAAGCCCCTA+TGG | - | chr2.2:67832122-67832141 | MS.gene01533:CDS | 35.0% | |
! | AGAAGTATGAAGACTTCTCA+TGG | - | chr2.2:67831459-67831478 | MS.gene01533:intron | 35.0% |
! | GGGATTTAAAACATCTGATC+TGG | + | chr2.2:67830169-67830188 | None:intergenic | 35.0% |
! | GTAACAATCTCCAATTTGCT+TGG | - | chr2.2:67830880-67830899 | MS.gene01533:CDS | 35.0% |
! | TAATTGGAACATAGCTTGCA+TGG | - | chr2.2:67830600-67830619 | MS.gene01533:CDS | 35.0% |
!! | ATCCTCAGTTGATAGAAAGA+GGG | - | chr2.2:67832050-67832069 | MS.gene01533:CDS | 35.0% |
!! | TGTTTTAAATCCCTATTGCG+GGG | - | chr2.2:67830176-67830195 | MS.gene01533:CDS | 35.0% |
AAACCTCAAGTGGTTAAGCA+TGG | + | chr2.2:67831609-67831628 | None:intergenic | 40.0% | |
ACTTGCAACAAGAGAACACA+TGG | + | chr2.2:67830439-67830458 | None:intergenic | 40.0% | |
AGAATGTAGATCGGACATTG+TGG | - | chr2.2:67831927-67831946 | MS.gene01533:intron | 40.0% | |
AGAGATGTTAAGTTCCGACT+CGG | - | chr2.2:67830794-67830813 | MS.gene01533:CDS | 40.0% | |
ATTGAAGGACAAAAGGCAAG+TGG | - | chr2.2:67831229-67831248 | MS.gene01533:intron | 40.0% | |
CACTTAGTTCCCAAGCAAAT+TGG | + | chr2.2:67830893-67830912 | None:intergenic | 40.0% | |
CAGGGATATAAAACCTCAAG+TGG | + | chr2.2:67831619-67831638 | None:intergenic | 40.0% | |
CCAAACCTTGGTTGAAGATT+GGG | - | chr2.2:67832098-67832117 | MS.gene01533:CDS | 40.0% | |
CTCTTGTTGCAAGTTATGTC+AGG | - | chr2.2:67830445-67830464 | MS.gene01533:CDS | 40.0% | |
GAAATCGAACCTGAAACCTT+GGG | - | chr2.2:67830259-67830278 | MS.gene01533:CDS | 40.0% | |
GCAAGTGGAGATGAAGATTA+AGG | - | chr2.2:67831244-67831263 | MS.gene01533:intron | 40.0% | |
GGCAGGAAAAGAATGTAGAT+CGG | - | chr2.2:67831918-67831937 | MS.gene01533:intron | 40.0% | |
GTCGGAACTTAACATCTCTT+CGG | + | chr2.2:67830793-67830812 | None:intergenic | 40.0% | |
TAACTGGCATCTACCACTAT+TGG | - | chr2.2:67831897-67831916 | MS.gene01533:intron | 40.0% | |
TCAATCCCAATCTTCAACCA+AGG | + | chr2.2:67832106-67832125 | None:intergenic | 40.0% | |
TCATCTGTTCTTCAAGAGCT+TGG | + | chr2.2:67831085-67831104 | None:intergenic | 40.0% | |
TCCAAACCTTGGTTGAAGAT+TGG | - | chr2.2:67832097-67832116 | MS.gene01533:CDS | 40.0% | |
TCTTGAAGTTGCTTAAGCAC+AGG | + | chr2.2:67831503-67831522 | None:intergenic | 40.0% | |
TGAACCATTCAGTTGTCAAC+CGG | + | chr2.2:67831187-67831206 | None:intergenic | 40.0% | |
TGTGAGAGATGTGAGTTCAA+TGG | - | chr2.2:67830062-67830081 | MS.gene01533:CDS | 40.0% | |
TTGCCATGAATGACTTTCGT+GGG | - | chr2.2:67831420-67831439 | MS.gene01533:intron | 40.0% | |
TTTGCCATGAATGACTTTCG+TGG | - | chr2.2:67831419-67831438 | MS.gene01533:intron | 40.0% | |
! | CATTCTTTTCCTGCCAATAG+TGG | + | chr2.2:67831913-67831932 | None:intergenic | 40.0% |
! | CCCAGACAGTATAAGCTTTT+TGG | + | chr2.2:67831161-67831180 | None:intergenic | 40.0% |
! | GTAGAGCAACAGATTTTCGA+AGG | - | chr2.2:67829564-67829583 | MS.gene01533:CDS | 40.0% |
! | TACTTTTCCGGAAACAGTGA+TGG | - | chr2.2:67831542-67831561 | MS.gene01533:intron | 40.0% |
! | TTATGGACTAACAGAACCCT+TGG | - | chr2.2:67831985-67832004 | MS.gene01533:intron | 40.0% |
! | TTTTAAATCCCTATTGCGGG+GGG | - | chr2.2:67830178-67830197 | MS.gene01533:CDS | 40.0% |
!! | AGCTTTGCTCTGGCTTTAAA+TGG | + | chr2.2:67830205-67830224 | None:intergenic | 40.0% |
!! | GATCCTCAGTTGATAGAAAG+AGG | - | chr2.2:67832049-67832068 | MS.gene01533:CDS | 40.0% |
!! | GCTTTGCTCTGGCTTTAAAT+GGG | + | chr2.2:67830204-67830223 | None:intergenic | 40.0% |
!! | GTTTTAAATCCCTATTGCGG+GGG | - | chr2.2:67830177-67830196 | MS.gene01533:CDS | 40.0% |
!! | TCCTCAGTTGATAGAAAGAG+GGG | - | chr2.2:67832051-67832070 | MS.gene01533:CDS | 40.0% |
AAGATTCCAAGCCAACCACT+AGG | - | chr2.2:67830295-67830314 | MS.gene01533:CDS | 45.0% | |
AGACAGTGCTATCCGAGATA+TGG | - | chr2.2:67830986-67831005 | MS.gene01533:CDS | 45.0% | |
AGACTCAATTTGAGTCCCTC+TGG | + | chr2.2:67829669-67829688 | None:intergenic | 45.0% | |
ATTATGCTTCGATGAAGGCG+TGG | - | chr2.2:67831396-67831415 | MS.gene01533:intron | 45.0% | |
ATTATTGGGGGATAGAGGTG+CGG | - | chr2.2:67830668-67830687 | MS.gene01533:CDS | 45.0% | |
CAGGAACACGATCTTCTTCA+GGG | + | chr2.2:67831654-67831673 | None:intergenic | 45.0% | |
CATCATTGCAACTTCAGTCG+TGG | - | chr2.2:67831304-67831323 | MS.gene01533:intron | 45.0% | |
CCCAATCTTCAACCAAGGTT+TGG | + | chr2.2:67832101-67832120 | None:intergenic | 45.0% | |
CTTTCCACCATCACTGTTTC+CGG | + | chr2.2:67831552-67831571 | None:intergenic | 45.0% | |
GATCGGACATTGTGGAAACT+CGG | - | chr2.2:67831935-67831954 | MS.gene01533:intron | 45.0% | |
GGAAATCGAACCTGAAACCT+TGG | - | chr2.2:67830258-67830277 | MS.gene01533:CDS | 45.0% | |
GTCCATACAAAGCTTTGCTC+TGG | + | chr2.2:67830215-67830234 | None:intergenic | 45.0% | |
TCAATGGGAACTCCAAACCT+TGG | - | chr2.2:67832086-67832105 | MS.gene01533:CDS | 45.0% | |
TCAGGGCAGGAAAAACTTCA+GGG | + | chr2.2:67831637-67831656 | None:intergenic | 45.0% | |
TGCCATGAATGACTTTCGTG+GGG | - | chr2.2:67831421-67831440 | MS.gene01533:intron | 45.0% | |
TGTCCATGCTTAACCACTTG+AGG | - | chr2.2:67831603-67831622 | MS.gene01533:intron | 45.0% | |
TGTTAAAGGAGAACGCCTAG+TGG | + | chr2.2:67830955-67830974 | None:intergenic | 45.0% | |
TTCAGGGCAGGAAAAACTTC+AGG | + | chr2.2:67831638-67831657 | None:intergenic | 45.0% | |
TTCTCTCAAATGCTGCCACT+AGG | - | chr2.2:67830937-67830956 | MS.gene01533:CDS | 45.0% | |
! | AGCCAGAGCAAAGCTTTGTA+TGG | - | chr2.2:67830210-67830229 | MS.gene01533:CDS | 45.0% |
! | CAAAGTGTAAGTTGGCCTAG+TGG | + | chr2.2:67830313-67830332 | None:intergenic | 45.0% |
! | CAGATTTTCGAAGGCCAGTA+CGG | - | chr2.2:67829573-67829592 | MS.gene01533:CDS | 45.0% |
! | TTTTCCGGAAACAGTGATGG+TGG | - | chr2.2:67831545-67831564 | MS.gene01533:intron | 45.0% |
!! | CATTTTGATCCCGATGCATG+CGG | - | chr2.2:67831821-67831840 | MS.gene01533:intron | 45.0% |
!! | TAGTGGTTGGCTTGGAATCT+TGG | + | chr2.2:67830296-67830315 | None:intergenic | 45.0% |
!! | ATAAAGAAAAATTATATTTA+GGG | + | chr2.2:67830509-67830528 | None:intergenic | 5.0% |
!! | TATAAAGAAAAATTATATTT+AGG | + | chr2.2:67830510-67830529 | None:intergenic | 5.0% |
AAACCCAGTACATGCCACGA+TGG | + | chr2.2:67832013-67832032 | None:intergenic | 50.0% | |
AAATGCCCATCCGCATGCAT+CGG | + | chr2.2:67831834-67831853 | None:intergenic | 50.0% | |
AACACGATCTTCTTCAGGGC+AGG | + | chr2.2:67831650-67831669 | None:intergenic | 50.0% | |
AAGTTGTCTGGTCACCGAGT+CGG | + | chr2.2:67830811-67830830 | None:intergenic | 50.0% | |
AATGCCCACCACAATGCATC+AGG | + | chr2.2:67829608-67829627 | None:intergenic | 50.0% | |
ACATGCCACGATGGATCCAA+GGG | + | chr2.2:67832004-67832023 | None:intergenic | 50.0% | |
ATCGAACCTGAAACCTTGGG+AGG | - | chr2.2:67830262-67830281 | MS.gene01533:CDS | 50.0% | |
ATGCATGCGGATGGGCATTT+GGG | - | chr2.2:67831834-67831853 | MS.gene01533:intron | 50.0% | |
CACCCCACGAAAGTCATTCA+TGG | + | chr2.2:67831426-67831445 | None:intergenic | 50.0% | |
CCAGGAACACGATCTTCTTC+AGG | + | chr2.2:67831655-67831674 | None:intergenic | 50.0% | |
CCTGAAGAAGATCGTGTTCC+TGG | - | chr2.2:67831652-67831671 | MS.gene01533:intron | 50.0% | |
GAAGGGTTCCTGATGCATTG+TGG | - | chr2.2:67829597-67829616 | MS.gene01533:CDS | 50.0% | |
GATCCATCGTGGCATGTACT+GGG | - | chr2.2:67832007-67832026 | MS.gene01533:intron | 50.0% | |
GCCCCTCTTTCTATCAACTG+AGG | + | chr2.2:67832055-67832074 | None:intergenic | 50.0% | |
GCTTATACTGTCTGGGTGTC+CGG | - | chr2.2:67831165-67831184 | MS.gene01533:intron | 50.0% | |
GGGCTGTACTGCACTTCAAT+GGG | - | chr2.2:67832071-67832090 | MS.gene01533:CDS | 50.0% | |
GGTTCCTGATGCATTGTGGT+GGG | - | chr2.2:67829601-67829620 | MS.gene01533:CDS | 50.0% | |
GTGTCCGGTTGACAACTGAA+TGG | - | chr2.2:67831180-67831199 | MS.gene01533:intron | 50.0% | |
TACATGCCACGATGGATCCA+AGG | + | chr2.2:67832005-67832024 | None:intergenic | 50.0% | |
TGGAGCTGTTGAGACATGCA+TGG | - | chr2.2:67831742-67831761 | MS.gene01533:intron | 50.0% | |
TGGCATCTACCACTATTGGC+AGG | - | chr2.2:67831901-67831920 | MS.gene01533:intron | 50.0% | |
! | GATTTCCCCGGTGCCAATTT+CGG | + | chr2.2:67830245-67830264 | None:intergenic | 50.0% |
! | GTGTAAGTTGGCCTAGTGGT+TGG | + | chr2.2:67830309-67830328 | None:intergenic | 50.0% |
! | TCGTGGCATGTACTGGGTTT+TGG | - | chr2.2:67832013-67832032 | MS.gene01533:intron | 50.0% |
!! | GGTTTCAGGTTCGATTTCCC+CGG | + | chr2.2:67830257-67830276 | None:intergenic | 50.0% |
AAACTCGGCACTTTGCCACC+TGG | - | chr2.2:67831950-67831969 | MS.gene01533:intron | 55.0% | |
AATGCCCATCCGCATGCATC+GGG | + | chr2.2:67831833-67831852 | None:intergenic | 55.0% | |
ATGGACTTGCCCGCCGAAAT+TGG | - | chr2.2:67830229-67830248 | MS.gene01533:CDS | 55.0% | |
CAGAACCCTTGGATCCATCG+TGG | - | chr2.2:67831996-67832015 | MS.gene01533:intron | 55.0% | |
CGATGACGTCGTGGTTCAGA+AGG | - | chr2.2:67831676-67831695 | MS.gene01533:intron | 55.0% | |
GATGCATGCGGATGGGCATT+TGG | - | chr2.2:67831833-67831852 | MS.gene01533:intron | 55.0% | |
GGATCCATCGTGGCATGTAC+TGG | - | chr2.2:67832006-67832025 | MS.gene01533:intron | 55.0% | |
GGGGCTGTACTGCACTTCAA+TGG | - | chr2.2:67832070-67832089 | MS.gene01533:CDS | 55.0% | |
GGGTTCCTGATGCATTGTGG+TGG | - | chr2.2:67829600-67829619 | MS.gene01533:CDS | 55.0% | |
GTCTAGACCGCCTTTGTCCA+AGG | - | chr2.2:67829685-67829704 | MS.gene01533:CDS | 55.0% | |
TAAATGGGCCCCCCGCAATA+GGG | + | chr2.2:67830189-67830208 | None:intergenic | 55.0% | |
TCAGGAACCCTTCTCCGTAC+TGG | + | chr2.2:67829590-67829609 | None:intergenic | 55.0% | |
TCGAAGGCCAGTACGGAGAA+GGG | - | chr2.2:67829580-67829599 | MS.gene01533:CDS | 55.0% | |
TGACTTTCGTGGGGTGACTG+TGG | - | chr2.2:67831430-67831449 | MS.gene01533:intron | 55.0% | |
TGATCCCGATGCATGCGGAT+GGG | - | chr2.2:67831826-67831845 | MS.gene01533:intron | 55.0% | |
TGTGCTCCTCCCAAGGTTTC+AGG | + | chr2.2:67830271-67830290 | None:intergenic | 55.0% | |
TTAAATGGGCCCCCCGCAAT+AGG | + | chr2.2:67830190-67830209 | None:intergenic | 55.0% | |
TTCGAAGGCCAGTACGGAGA+AGG | - | chr2.2:67829579-67829598 | MS.gene01533:CDS | 55.0% | |
TTGATCCCGATGCATGCGGA+TGG | - | chr2.2:67831825-67831844 | MS.gene01533:intron | 55.0% | |
! | AGGTGCGGTGATGGTGAGTT+TGG | - | chr2.2:67830683-67830702 | MS.gene01533:CDS | 55.0% |
! | AGTTGGCCTAGTGGTTGGCT+TGG | + | chr2.2:67830304-67830323 | None:intergenic | 55.0% |
! | CATAATGGAGCTGCTGAGCC+TGG | + | chr2.2:67831025-67831044 | None:intergenic | 55.0% |
! | GGTGCGGTGATGGTGAGTTT+GGG | - | chr2.2:67830684-67830703 | MS.gene01533:CDS | 55.0% |
CTTGGAGTGTGCTCCTCCCA+AGG | + | chr2.2:67830278-67830297 | None:intergenic | 60.0% | |
CTTTCGTGGGGTGACTGTGG+AGG | - | chr2.2:67831433-67831452 | MS.gene01533:intron | 60.0% | |
GAACCACGACGTCATCGTCC+AGG | + | chr2.2:67831673-67831692 | None:intergenic | 60.0% | |
GTTCCTGGACGATGACGTCG+TGG | - | chr2.2:67831667-67831686 | MS.gene01533:intron | 60.0% | |
TTGCCCGCCGAAATTGGCAC+CGG | - | chr2.2:67830235-67830254 | MS.gene01533:CDS | 60.0% | |
! | TTCCCCGGTGCCAATTTCGG+CGG | + | chr2.2:67830242-67830261 | None:intergenic | 60.0% |
TGCCCGCCGAAATTGGCACC+GGG | - | chr2.2:67830236-67830255 | MS.gene01533:CDS | 65.0% | |
! | GGGGGATAGAGGTGCGGTGA+TGG | - | chr2.2:67830674-67830693 | MS.gene01533:CDS | 65.0% |
! | TCCCCGGTGCCAATTTCGGC+GGG | + | chr2.2:67830241-67830260 | None:intergenic | 65.0% |
GCCCGCCGAAATTGGCACCG+GGG | - | chr2.2:67830237-67830256 | MS.gene01533:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 67829557 | 67832198 | 67829557 | ID=MS.gene01533 |
chr2.2 | mRNA | 67829557 | 67832198 | 67829557 | ID=MS.gene01533.t1;Parent=MS.gene01533 |
chr2.2 | exon | 67832049 | 67832198 | 67832049 | ID=MS.gene01533.t1.exon1;Parent=MS.gene01533.t1 |
chr2.2 | CDS | 67832049 | 67832198 | 67832049 | ID=cds.MS.gene01533.t1;Parent=MS.gene01533.t1 |
chr2.2 | exon | 67829557 | 67831008 | 67829557 | ID=MS.gene01533.t1.exon2;Parent=MS.gene01533.t1 |
chr2.2 | CDS | 67829557 | 67831008 | 67829557 | ID=cds.MS.gene01533.t1;Parent=MS.gene01533.t1 |
Gene Sequence |
Protein sequence |