Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016007.t1 | XP_013465806.1 | 97.3 | 709 | 14 | 2 | 1 | 705 | 1 | 708 | 0.00E+00 | 1263.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016007.t1 | F4IRM4 | 55.5 | 741 | 289 | 10 | 1 | 703 | 1 | 738 | 3.7e-219 | 762.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016007.t1 | A0A072VDJ0 | 97.3 | 709 | 14 | 2 | 1 | 705 | 1 | 708 | 0.0e+00 | 1263.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene042139 | MS.gene016007 | PPI |
| MS.gene68933 | MS.gene016007 | PPI |
| MS.gene68959 | MS.gene016007 | PPI |
| MS.gene012678 | MS.gene016007 | PPI |
| MS.gene016007 | MS.gene68877 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016007.t1 | MTR_1g012840 | 96.897 | 709 | 17 | 2 | 1 | 705 | 1 | 708 | 0.0 | 1417 |
| MS.gene016007.t1 | MTR_4g132780 | 36.786 | 753 | 364 | 14 | 1 | 655 | 1 | 739 | 1.41e-149 | 454 |
| MS.gene016007.t1 | MTR_2g025130 | 39.437 | 426 | 203 | 9 | 248 | 658 | 55 | 440 | 1.56e-89 | 288 |
| MS.gene016007.t1 | MTR_2g451540 | 57.377 | 183 | 73 | 3 | 6 | 185 | 2 | 182 | 1.83e-60 | 216 |
| MS.gene016007.t1 | MTR_7g059150 | 31.646 | 158 | 93 | 5 | 7 | 152 | 52 | 206 | 5.93e-16 | 79.0 |
| MS.gene016007.t1 | MTR_2g090135 | 33.913 | 115 | 70 | 4 | 41 | 152 | 98 | 209 | 8.46e-14 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016007.t1 | AT2G25290 | 58.277 | 743 | 265 | 13 | 1 | 703 | 1 | 738 | 0.0 | 827 |
| MS.gene016007.t1 | AT2G25290 | 58.277 | 743 | 265 | 13 | 1 | 703 | 1 | 738 | 0.0 | 827 |
| MS.gene016007.t1 | AT2G25290 | 58.277 | 743 | 265 | 13 | 1 | 703 | 1 | 738 | 0.0 | 827 |
| MS.gene016007.t1 | AT2G25290 | 58.277 | 743 | 265 | 13 | 1 | 703 | 1 | 738 | 0.0 | 827 |
| MS.gene016007.t1 | AT4G32070 | 54.789 | 783 | 266 | 17 | 1 | 703 | 1 | 775 | 0.0 | 800 |
| MS.gene016007.t1 | AT4G32070 | 54.789 | 783 | 266 | 17 | 1 | 703 | 1 | 775 | 0.0 | 800 |
| MS.gene016007.t1 | AT5G20360 | 39.826 | 688 | 381 | 13 | 38 | 701 | 33 | 711 | 1.00e-164 | 491 |
| MS.gene016007.t1 | AT5G20360 | 39.826 | 688 | 381 | 13 | 38 | 701 | 33 | 711 | 1.00e-164 | 491 |
| MS.gene016007.t1 | AT5G20360 | 39.826 | 688 | 381 | 13 | 38 | 701 | 63 | 741 | 2.89e-164 | 491 |
| MS.gene016007.t1 | AT5G20360 | 39.826 | 688 | 381 | 13 | 38 | 701 | 63 | 741 | 2.89e-164 | 491 |
| MS.gene016007.t1 | AT5G20360 | 39.826 | 688 | 381 | 13 | 38 | 701 | 113 | 791 | 1.51e-163 | 491 |
| MS.gene016007.t1 | AT5G20360 | 39.826 | 688 | 381 | 13 | 38 | 701 | 123 | 801 | 3.30e-163 | 490 |
| MS.gene016007.t1 | AT5G20360 | 39.826 | 688 | 381 | 13 | 38 | 701 | 123 | 801 | 3.30e-163 | 490 |
| MS.gene016007.t1 | AT1G62390 | 37.143 | 700 | 367 | 9 | 31 | 658 | 41 | 739 | 1.18e-145 | 443 |
| MS.gene016007.t1 | AT3G58620 | 36.885 | 122 | 70 | 3 | 45 | 166 | 453 | 567 | 4.53e-12 | 69.7 |
| MS.gene016007.t1 | AT3G58620 | 36.885 | 122 | 70 | 3 | 45 | 166 | 453 | 567 | 5.29e-12 | 69.7 |
| MS.gene016007.t1 | AT4G30480 | 34.532 | 139 | 78 | 4 | 41 | 169 | 105 | 240 | 1.13e-11 | 66.6 |
Find 176 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTTTGGCTTTGTTTAAT+TGG | 0.077180 | 1.4:+8298614 | MS.gene016007:CDS |
| TGCTTTGGCTTTGTTTAATT+GGG | 0.159575 | 1.4:+8298615 | MS.gene016007:CDS |
| TAATGCACAGTTAGAGAAAA+TGG | 0.163980 | 1.4:+8299017 | MS.gene016007:CDS |
| TTCTTGTTGTTGTTTGATTT+TGG | 0.181726 | 1.4:-8297350 | None:intergenic |
| GGCGTTGAATCGGTTGGATT+TGG | 0.260217 | 1.4:+8297691 | MS.gene016007:CDS |
| GTATATTACACAGGTGGATT+TGG | 0.285628 | 1.4:+8298303 | MS.gene016007:CDS |
| GGATAGGTATCCGGGGTTAA+AGG | 0.285842 | 1.4:+8298174 | MS.gene016007:CDS |
| CGCGGTTTAGGAAAGTTGTT+AGG | 0.290109 | 1.4:+8297873 | MS.gene016007:CDS |
| ACAATAAGGTGCCCCATAAA+AGG | 0.298701 | 1.4:-8299116 | None:intergenic |
| GCAGAGGACAGCATGGAAAA+AGG | 0.303320 | 1.4:+8298931 | MS.gene016007:CDS |
| TACACAGGTGGATTTGGATA+TGG | 0.326642 | 1.4:+8298309 | MS.gene016007:CDS |
| GTTTGATTCTGATTCGTATC+TGG | 0.333235 | 1.4:+8298480 | MS.gene016007:CDS |
| GTGAGGTGAGAGGGGAGAAT+GGG | 0.343540 | 1.4:+8298362 | MS.gene016007:CDS |
| GGGGAATGTTCACTTGTCTA+AGG | 0.350249 | 1.4:+8298636 | MS.gene016007:CDS |
| TGATAGTTTGAGGATTACTA+TGG | 0.351621 | 1.4:+8297778 | MS.gene016007:CDS |
| TAAGGATAGGGAAGGTGATT+TGG | 0.357323 | 1.4:+8298213 | MS.gene016007:CDS |
| AGCCGCCTGCTGCGCGGTTT+AGG | 0.357668 | 1.4:+8297861 | MS.gene016007:CDS |
| GTTTCAAGAGATGGCTGCTT+TGG | 0.361028 | 1.4:+8298600 | MS.gene016007:CDS |
| GGCCATGTGTTATATGCAAC+TGG | 0.367125 | 1.4:+8297568 | MS.gene016007:CDS |
| TATTAGATGGGCGCAGTTGC+CGG | 0.370574 | 1.4:+8298114 | MS.gene016007:CDS |
| TCCAACGCGGTTGAATTATT+CGG | 0.372614 | 1.4:-8297749 | None:intergenic |
| ACCAACATGGGAGGAATGTT+TGG | 0.374580 | 1.4:+8299173 | MS.gene016007:CDS |
| GGGCGTTCTTGTGAAGTATA+AGG | 0.385302 | 1.4:+8298195 | MS.gene016007:CDS |
| TTCTGAAGAAGCTGAAGATC+AGG | 0.386284 | 1.4:+8299068 | MS.gene016007:CDS |
| AGGACTGTGAAGTTGATATA+TGG | 0.388536 | 1.4:+8298085 | MS.gene016007:CDS |
| TGATAGTAAGGAAGTTGTTA+AGG | 0.388959 | 1.4:+8298045 | MS.gene016007:CDS |
| GGCTGTTTAAGAACCATGTT+GGG | 0.393596 | 1.4:+8298458 | MS.gene016007:CDS |
| TATATGGAGAGGATATTAGA+TGG | 0.397585 | 1.4:+8298101 | MS.gene016007:CDS |
| ATGGGCTACGAAGGAGTATA+AGG | 0.401726 | 1.4:+8298732 | MS.gene016007:CDS |
| CGAGTAGTGGTGAGGTGAGA+GGG | 0.406286 | 1.4:+8298353 | MS.gene016007:CDS |
| TACGAGGGACTCCTAGCTCT+TGG | 0.413739 | 1.4:+8298802 | MS.gene016007:CDS |
| TGATGAGACTGAGATTGCTT+TGG | 0.414076 | 1.4:+8297820 | MS.gene016007:CDS |
| AACAGAACGCTCATACAATA+AGG | 0.415328 | 1.4:-8299130 | None:intergenic |
| GGTGAGGTGAGAGGGGAGAA+TGG | 0.419918 | 1.4:+8298361 | MS.gene016007:CDS |
| GTGAGAGGGGAGAATGGGGT+TGG | 0.422494 | 1.4:+8298367 | MS.gene016007:CDS |
| GAGAAGGAGATAAGGGTGTT+GGG | 0.425281 | 1.4:+8298389 | MS.gene016007:CDS |
| GGGGAGAATGGGGTTGGAGA+AGG | 0.425637 | 1.4:+8298373 | MS.gene016007:CDS |
| AAATGTTAATGTTAATGTTA+AGG | 0.428883 | 1.4:+8297991 | MS.gene016007:CDS |
| TGGAGATTCTTGATAGTTTG+AGG | 0.428936 | 1.4:+8297768 | MS.gene016007:CDS |
| AGCTGCAGAACCTCCTCAAA+AGG | 0.429826 | 1.4:-8298898 | None:intergenic |
| TGTGATAAGGGATAGGTATC+CGG | 0.440872 | 1.4:+8298165 | MS.gene016007:CDS |
| GGATAAGGATAATGATAGTA+AGG | 0.441125 | 1.4:+8298033 | MS.gene016007:CDS |
| AAAATTGTTCCAGGATGTAA+TGG | 0.443210 | 1.4:-8299505 | None:intergenic |
| AACATTAACATTTCCAACAT+TGG | 0.446243 | 1.4:-8297981 | None:intergenic |
| CTCGACCCGTCTTCCTGAAA+AGG | 0.446613 | 1.4:-8298673 | None:intergenic |
| ATCTGGATATTCATGAGGTT+GGG | 0.451158 | 1.4:+8298497 | MS.gene016007:CDS |
| GGTTGGGATGAAGATATATT+CGG | 0.451414 | 1.4:+8298513 | MS.gene016007:CDS |
| TGGGGTTGGAGAAGGAGATA+AGG | 0.452188 | 1.4:+8298381 | MS.gene016007:CDS |
| GTGATAAGGGATAGGTATCC+GGG | 0.453408 | 1.4:+8298166 | MS.gene016007:CDS |
| GGGTAAAGATTCGAAGGATA+AGG | 0.455480 | 1.4:+8298018 | MS.gene016007:CDS |
| GTCATGTGCTTGGTTCGATT+CGG | 0.456942 | 1.4:+8298278 | MS.gene016007:CDS |
| AGGATTACTATGGAGGAGAA+AGG | 0.457524 | 1.4:+8297788 | MS.gene016007:CDS |
| AACAATAAGAATATCGAAGT+TGG | 0.461398 | 1.4:+8298874 | MS.gene016007:CDS |
| TGGGTCTCGGCGAATATCCT+CGG | 0.465244 | 1.4:+8297588 | MS.gene016007:CDS |
| ACGAGGGACTCCTAGCTCTT+GGG | 0.465698 | 1.4:+8298803 | MS.gene016007:CDS |
| GCTGAGGGTTGTCATGTGCT+TGG | 0.466822 | 1.4:+8298268 | MS.gene016007:CDS |
| GCTTTGGCTTTGTTTAATTG+GGG | 0.471043 | 1.4:+8298616 | MS.gene016007:CDS |
| AGTTGTTAAGGAAGATAAAG+TGG | 0.471064 | 1.4:+8298057 | MS.gene016007:CDS |
| TATCTGGATATTCATGAGGT+TGG | 0.472474 | 1.4:+8298496 | MS.gene016007:CDS |
| GTTGGTGAGAGATGTGATAA+GGG | 0.473972 | 1.4:+8298153 | MS.gene016007:CDS |
| AGATCGATGGGGAAACCAGC+TGG | 0.483060 | 1.4:+8297305 | None:intergenic |
| GGGGTTGGAGAAGGAGATAA+GGG | 0.485908 | 1.4:+8298382 | MS.gene016007:CDS |
| TGTTATATGCAACTGGGTCT+CGG | 0.485937 | 1.4:+8297575 | MS.gene016007:CDS |
| AATGCACAGTTAGAGAAAAT+GGG | 0.486916 | 1.4:+8299018 | MS.gene016007:CDS |
| GGAGAAGGAGATAAGGGTGT+TGG | 0.487702 | 1.4:+8298388 | MS.gene016007:CDS |
| TTGAGCAAGCAAAGCTATGC+TGG | 0.490157 | 1.4:+8298836 | MS.gene016007:CDS |
| GATAGGTATCCGGGGTTAAA+GGG | 0.490961 | 1.4:+8298175 | MS.gene016007:CDS |
| AGTGTTACGAGGCGTTGAAT+CGG | 0.494656 | 1.4:+8297681 | MS.gene016007:CDS |
| TCACAAGAATTAAGAGAAGA+AGG | 0.494937 | 1.4:+8297431 | MS.gene016007:CDS |
| ATGTTAAAGCTGGATATGAA+TGG | 0.495987 | 1.4:+8298713 | MS.gene016007:CDS |
| AGTTGGTGAGAGATGTGATA+AGG | 0.498390 | 1.4:+8298152 | MS.gene016007:CDS |
| TCCAGGATGTAATGGAGTCT+TGG | 0.500662 | 1.4:-8299497 | None:intergenic |
| TTCTGAGTTGAGGTTAGCTG+AGG | 0.503420 | 1.4:+8298252 | MS.gene016007:CDS |
| AATGTTAATGTTAAGGTGAA+GGG | 0.505406 | 1.4:+8297998 | MS.gene016007:CDS |
| CTTTGGCTTTGTTTAATTGG+GGG | 0.508071 | 1.4:+8298617 | MS.gene016007:CDS |
| GAGTAGTGGTGAGGTGAGAG+GGG | 0.509540 | 1.4:+8298354 | MS.gene016007:CDS |
| GTTGATGTGGGAGGAGATTG+AGG | 0.511356 | 1.4:+8298957 | MS.gene016007:CDS |
| GGATTACTATGGAGGAGAAA+GGG | 0.511446 | 1.4:+8297789 | MS.gene016007:CDS |
| TTACGAGGCGTTGAATCGGT+TGG | 0.511704 | 1.4:+8297685 | MS.gene016007:CDS |
| GAGAAGAAAGCCGCCAATGT+TGG | 0.512310 | 1.4:+8297968 | MS.gene016007:CDS |
| TGTTAAAGCTGGATATGAAT+GGG | 0.512823 | 1.4:+8298714 | MS.gene016007:CDS |
| TCTGTTGTGGAATTTAAGCT+AGG | 0.515915 | 1.4:+8299147 | MS.gene016007:CDS |
| GACTCGAACCATTGTTTCGT+CGG | 0.516704 | 1.4:+8299468 | MS.gene016007:CDS |
| AATGTCAGTTGTAGAAGCTC+CGG | 0.523785 | 1.4:-8299223 | None:intergenic |
| GAAGATATATTCGGAGGCAA+TGG | 0.524457 | 1.4:+8298522 | MS.gene016007:CDS |
| AGGCTGTTTAAGAACCATGT+TGG | 0.526266 | 1.4:+8298457 | MS.gene016007:CDS |
| TAATGTTAATGTTAAGGTGA+AGG | 0.526267 | 1.4:+8297997 | MS.gene016007:CDS |
| AATGGTTCGAGTCGGAAAGT+TGG | 0.527329 | 1.4:-8299458 | None:intergenic |
| TGCAGATAAGTTTCAAGAGA+TGG | 0.529267 | 1.4:+8298591 | MS.gene016007:CDS |
| TCTCTCGAGCATGTTAAAGC+TGG | 0.529882 | 1.4:+8298703 | MS.gene016007:CDS |
| GCGGTTTAGGAAAGTTGTTA+GGG | 0.534543 | 1.4:+8297874 | MS.gene016007:CDS |
| ACTTTCCTAAACCGCGCAGC+AGG | 0.535349 | 1.4:-8297866 | None:intergenic |
| TAGTTTGAGGATTACTATGG+AGG | 0.535558 | 1.4:+8297781 | MS.gene016007:CDS |
| GTTGAAAAGTTTGAACTAGC+CGG | 0.537285 | 1.4:+8299204 | MS.gene016007:CDS |
| AGGAGTCCCTCGTAGAAGTC+CGG | 0.537617 | 1.4:-8298793 | None:intergenic |
| ACGAGTAGTGGTGAGGTGAG+AGG | 0.538084 | 1.4:+8298352 | MS.gene016007:CDS |
| ACAAGAACGCCCTTTAACCC+CGG | 0.539546 | 1.4:-8298184 | None:intergenic |
| ATTGAGGAACAGCGTTTGAA+CGG | 0.539972 | 1.4:+8298973 | MS.gene016007:CDS |
| GCCGAATAATTCAACCGCGT+TGG | 0.540374 | 1.4:+8297748 | MS.gene016007:CDS |
| TGAGAGATGTGATAAGGGAT+AGG | 0.541480 | 1.4:+8298158 | MS.gene016007:CDS |
| AGGAAGATAAAGTGGTTACT+AGG | 0.545146 | 1.4:+8298065 | MS.gene016007:CDS |
| GCATGGAATGAGATGTATGA+TGG | 0.545970 | 1.4:+8299419 | MS.gene016007:CDS |
| TTGCTGTTTCATTAGAACAA+TGG | 0.546528 | 1.4:-8299263 | None:intergenic |
| AGAATCTGTGAAAATCAAAC+CGG | 0.549691 | 1.4:+8298774 | MS.gene016007:CDS |
| GGGTCTCGGCGAATATCCTC+GGG | 0.551912 | 1.4:+8297589 | MS.gene016007:CDS |
| TCTGAGTTGAGGTTAGCTGA+GGG | 0.552191 | 1.4:+8298253 | MS.gene016007:CDS |
| GGATGATTACTGTGGAGGAA+TGG | 0.555855 | 1.4:+8298419 | MS.gene016007:CDS |
| AAGGAGAAGGCGAGGAAGAG+AGG | 0.556285 | 1.4:+8297927 | MS.gene016007:CDS |
| TCGATGACATAGTGCAAGCA+TGG | 0.557013 | 1.4:+8299402 | MS.gene016007:CDS |
| CATATAACACATGGCCATGT+TGG | 0.560534 | 1.4:-8297561 | None:intergenic |
| GCTGCAGAACCTCCTCAAAA+GGG | 0.561685 | 1.4:-8298897 | None:intergenic |
| AAGTAGAGCCGCCTGCTGCG+CGG | 0.563860 | 1.4:+8297855 | MS.gene016007:CDS |
| ATTAACATTTCCAACATTGG+CGG | 0.564421 | 1.4:-8297978 | None:intergenic |
| TCTTGTGAAGTATAAGGATA+GGG | 0.564771 | 1.4:+8298201 | MS.gene016007:CDS |
| TAATAGGATGATTACTGTGG+AGG | 0.566538 | 1.4:+8298414 | MS.gene016007:CDS |
| TGAGGTGAGAGGGGAGAATG+GGG | 0.567723 | 1.4:+8298363 | MS.gene016007:CDS |
| TTCTTGTGAAGTATAAGGAT+AGG | 0.569273 | 1.4:+8298200 | MS.gene016007:CDS |
| AGAAGGAGATAAGGGTGTTG+GGG | 0.570165 | 1.4:+8298390 | MS.gene016007:CDS |
| GGAACACGCCGACGAAACAA+TGG | 0.570618 | 1.4:-8299476 | None:intergenic |
| AACATGGGAGGAATGTTTGG+AGG | 0.573058 | 1.4:+8299176 | MS.gene016007:CDS |
| GGTGAAGGGTAAAGATTCGA+AGG | 0.576127 | 1.4:+8298012 | MS.gene016007:CDS |
| ACTGTTGATACCCAAGAGCT+AGG | 0.576141 | 1.4:-8298813 | None:intergenic |
| GATATATTCGGAGGCAATGG+AGG | 0.579820 | 1.4:+8298525 | MS.gene016007:CDS |
| TCCAAGACTCCATTACATCC+TGG | 0.582606 | 1.4:+8299496 | MS.gene016007:CDS |
| TTACTACTACTTCTGAGTTG+AGG | 0.582702 | 1.4:+8298242 | MS.gene016007:CDS |
| GAGGATTCAGTGACGAATGA+TGG | 0.583213 | 1.4:+8298544 | MS.gene016007:CDS |
| AAGAAAGGGCATAAAGGAGA+AGG | 0.589038 | 1.4:+8297914 | MS.gene016007:CDS |
| AATGGCTTGTTCAGTTTGCG+AGG | 0.590314 | 1.4:+8298437 | MS.gene016007:CDS |
| TCCAAACATTCCTCCCATGT+TGG | 0.593550 | 1.4:-8299174 | None:intergenic |
| TTAGAGAAAATGGGTTTGCA+CGG | 0.595862 | 1.4:+8299027 | MS.gene016007:CDS |
| TTCCTAAACCGCGCAGCAGG+CGG | 0.600423 | 1.4:-8297863 | None:intergenic |
| ATATGGAGAGGATATTAGAT+GGG | 0.603947 | 1.4:+8298102 | MS.gene016007:CDS |
| TGGATATGAATGGGCTACGA+AGG | 0.610634 | 1.4:+8298723 | MS.gene016007:CDS |
| TAACAAGGCAGAGGACAGCA+TGG | 0.611758 | 1.4:+8298924 | MS.gene016007:CDS |
| GGTGAATTGTAGTATGAAGT+TGG | 0.612990 | 1.4:+8298135 | MS.gene016007:CDS |
| AGAAGAGCTTTACTATACCT+CGG | 0.613368 | 1.4:-8297647 | None:intergenic |
| ATCAAACCGGACTTCTACGA+GGG | 0.616046 | 1.4:+8298787 | MS.gene016007:CDS |
| ATTGTATGAGCGTTCTGTTG+TGG | 0.617025 | 1.4:+8299134 | MS.gene016007:CDS |
| GAAGGAGATAAGGGTGTTGG+GGG | 0.617492 | 1.4:+8298391 | MS.gene016007:CDS |
| AACTTCATACTACAATTCAC+CGG | 0.617885 | 1.4:-8298133 | None:intergenic |
| GGTTCTGCAGCTCTATAACA+AGG | 0.619781 | 1.4:+8298909 | MS.gene016007:CDS |
| AAAAGGGATGTTGATGTGGG+AGG | 0.621444 | 1.4:+8298948 | MS.gene016007:CDS |
| TTGTTCTAATGAAACAGCAA+TGG | 0.622294 | 1.4:+8299266 | MS.gene016007:CDS |
| AGGGCATAAAGGAGAAGGCG+AGG | 0.623032 | 1.4:+8297919 | MS.gene016007:CDS |
| TTCGTATCTGGATATTCATG+AGG | 0.624473 | 1.4:+8298492 | MS.gene016007:CDS |
| GATTCGGCTGTATATTACAC+AGG | 0.625199 | 1.4:+8298294 | MS.gene016007:CDS |
| TCTAATGAAACAGCAATGGA+AGG | 0.625596 | 1.4:+8299270 | MS.gene016007:CDS |
| AATCAGAATCAAACCCAACA+TGG | 0.625835 | 1.4:-8298471 | None:intergenic |
| GTGAAGTATAAGGATAGGGA+AGG | 0.628310 | 1.4:+8298205 | MS.gene016007:CDS |
| TTAAGCTAGGACTACCAACA+TGG | 0.632474 | 1.4:+8299160 | MS.gene016007:CDS |
| GCAGCTCTATAACAAGGCAG+AGG | 0.632813 | 1.4:+8298915 | MS.gene016007:CDS |
| AAGATCAGGCTTCAAAGATG+AGG | 0.634249 | 1.4:+8299082 | MS.gene016007:CDS |
| TCGGCTGTATATTACACAGG+TGG | 0.635730 | 1.4:+8298297 | MS.gene016007:CDS |
| TGCACATCTTCACACCAACA+TGG | 0.638664 | 1.4:+8297547 | MS.gene016007:CDS |
| TTGTGACATGTTGATGAACA+TGG | 0.639131 | 1.4:-8297414 | None:intergenic |
| TCAAACAACAACAAGAACAA+AGG | 0.642821 | 1.4:+8297356 | MS.gene016007:CDS |
| TGTGAAGTTGATATATGGAG+AGG | 0.643074 | 1.4:+8298090 | MS.gene016007:CDS |
| GACGAAACAATGGTTCGAGT+CGG | 0.643395 | 1.4:-8299466 | None:intergenic |
| GGAGCTTCTACAACTGACAT+TGG | 0.653645 | 1.4:+8299225 | MS.gene016007:CDS |
| ATGTTCACTTGTCTAAGGCG+AGG | 0.655166 | 1.4:+8298641 | MS.gene016007:CDS |
| ACCCAGTTGCATATAACACA+TGG | 0.660668 | 1.4:-8297570 | None:intergenic |
| CATGGAATGAGATGTATGAT+GGG | 0.662583 | 1.4:+8299420 | MS.gene016007:CDS |
| TGATAAGGGATAGGTATCCG+GGG | 0.671748 | 1.4:+8298167 | MS.gene016007:CDS |
| TTGCACTCGTTAATCGCCCG+AGG | 0.674450 | 1.4:-8297605 | None:intergenic |
| TAAGCTAGGACTACCAACAT+GGG | 0.675321 | 1.4:+8299161 | MS.gene016007:CDS |
| TTCACTTGTCTAAGGCGAGG+AGG | 0.676418 | 1.4:+8298644 | MS.gene016007:CDS |
| GCCATGTGTTATATGCAACT+GGG | 0.677393 | 1.4:+8297569 | MS.gene016007:CDS |
| TTGCTCTGCAAGTTTCGCCG+AGG | 0.682933 | 1.4:+8297630 | MS.gene016007:CDS |
| TGGGATGAAGATATATTCGG+AGG | 0.690271 | 1.4:+8298516 | MS.gene016007:CDS |
| GGGTAATAGGATGATTACTG+TGG | 0.695994 | 1.4:+8298411 | MS.gene016007:CDS |
| AATCAAACCGGACTTCTACG+AGG | 0.700981 | 1.4:+8298786 | MS.gene016007:CDS |
| GAAGATGTGCAACATCTATG+TGG | 0.701400 | 1.4:-8297535 | None:intergenic |
| TAGAAGAGCTAAGTGTTACG+AGG | 0.702766 | 1.4:+8297670 | MS.gene016007:CDS |
| GCTAGGACTACCAACATGGG+AGG | 0.703040 | 1.4:+8299164 | MS.gene016007:CDS |
| GGAATGAGATGTATGATGGG+TGG | 0.713527 | 1.4:+8299423 | MS.gene016007:CDS |
| ACTATCAAGAATCTCCAACG+CGG | 0.838157 | 1.4:-8297762 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAATATTTGAAACATAAA+AGG | - | chr1.4:8299341-8299360 | None:intergenic | 10.0% |
| !!! | TTTATGTTTCAAATATTTTA+GGG | + | chr1.4:8299341-8299360 | MS.gene016007:intron | 10.0% |
| !!! | TTTTATGTTTCAAATATTTT+AGG | + | chr1.4:8299340-8299359 | MS.gene016007:intron | 10.0% |
| !! | AAATGTTAATGTTAATGTTA+AGG | + | chr1.4:8297991-8298010 | MS.gene016007:CDS | 15.0% |
| !! | AAGATTAATAAGAAAAAGAA+AGG | + | chr1.4:8297899-8297918 | MS.gene016007:CDS | 15.0% |
| !! | AGATTAATAAGAAAAAGAAA+GGG | + | chr1.4:8297900-8297919 | MS.gene016007:CDS | 15.0% |
| ! | AACAATAAGAATATCGAAGT+TGG | + | chr1.4:8298874-8298893 | MS.gene016007:CDS | 25.0% |
| ! | AACATTAACATTTCCAACAT+TGG | - | chr1.4:8297984-8298003 | None:intergenic | 25.0% |
| ! | AATGTTAATGTTAAGGTGAA+GGG | + | chr1.4:8297998-8298017 | MS.gene016007:CDS | 25.0% |
| ! | TAATGTTAATGTTAAGGTGA+AGG | + | chr1.4:8297997-8298016 | MS.gene016007:CDS | 25.0% |
| !! | ATACAGATATACCTTTTATG+GGG | + | chr1.4:8299105-8299124 | MS.gene016007:CDS | 25.0% |
| !! | GATACAGATATACCTTTTAT+GGG | + | chr1.4:8299104-8299123 | MS.gene016007:CDS | 25.0% |
| !!! | TTCTTGTTGTTGTTTGATTT+TGG | - | chr1.4:8297353-8297372 | None:intergenic | 25.0% |
| AAAATTGTTCCAGGATGTAA+TGG | - | chr1.4:8299508-8299527 | None:intergenic | 30.0% | |
| AACTTCATACTACAATTCAC+CGG | - | chr1.4:8298136-8298155 | None:intergenic | 30.0% | |
| AATGCACAGTTAGAGAAAAT+GGG | + | chr1.4:8299018-8299037 | MS.gene016007:CDS | 30.0% | |
| AGAATCTGTGAAAATCAAAC+CGG | + | chr1.4:8298774-8298793 | MS.gene016007:CDS | 30.0% | |
| AGTTGTTAAGGAAGATAAAG+TGG | + | chr1.4:8298057-8298076 | MS.gene016007:CDS | 30.0% | |
| ATATGGAGAGGATATTAGAT+GGG | + | chr1.4:8298102-8298121 | MS.gene016007:CDS | 30.0% | |
| ATGTTAAAGCTGGATATGAA+TGG | + | chr1.4:8298713-8298732 | MS.gene016007:CDS | 30.0% | |
| ATTAACATTTCCAACATTGG+CGG | - | chr1.4:8297981-8298000 | None:intergenic | 30.0% | |
| GGATAAGGATAATGATAGTA+AGG | + | chr1.4:8298033-8298052 | MS.gene016007:CDS | 30.0% | |
| TAATGCACAGTTAGAGAAAA+TGG | + | chr1.4:8299017-8299036 | MS.gene016007:CDS | 30.0% | |
| TATATGGAGAGGATATTAGA+TGG | + | chr1.4:8298101-8298120 | MS.gene016007:CDS | 30.0% | |
| TATGATGAAAAAACGAGTAG+TGG | + | chr1.4:8298340-8298359 | MS.gene016007:CDS | 30.0% | |
| TCAAACAACAACAAGAACAA+AGG | + | chr1.4:8297356-8297375 | MS.gene016007:CDS | 30.0% | |
| TCACAAGAATTAAGAGAAGA+AGG | + | chr1.4:8297431-8297450 | MS.gene016007:CDS | 30.0% | |
| TCTTGTGAAGTATAAGGATA+GGG | + | chr1.4:8298201-8298220 | MS.gene016007:CDS | 30.0% | |
| TGATAGTAAGGAAGTTGTTA+AGG | + | chr1.4:8298045-8298064 | MS.gene016007:CDS | 30.0% | |
| TGATAGTTTGAGGATTACTA+TGG | + | chr1.4:8297778-8297797 | MS.gene016007:CDS | 30.0% | |
| TGTTAAAGCTGGATATGAAT+GGG | + | chr1.4:8298714-8298733 | MS.gene016007:CDS | 30.0% | |
| TTCCAAAAAAAAGACAACGA+AGG | + | chr1.4:8297467-8297486 | MS.gene016007:CDS | 30.0% | |
| TTCTTGTGAAGTATAAGGAT+AGG | + | chr1.4:8298200-8298219 | MS.gene016007:CDS | 30.0% | |
| TTGTTCTAATGAAACAGCAA+TGG | + | chr1.4:8299266-8299285 | MS.gene016007:CDS | 30.0% | |
| ! | AAGAAAAAGAAAGGGCATAA+AGG | + | chr1.4:8297908-8297927 | MS.gene016007:CDS | 30.0% |
| ! | GGATACAGATATACCTTTTA+TGG | + | chr1.4:8299103-8299122 | MS.gene016007:CDS | 30.0% |
| !! | AAACCACTTTTCATGATTAC+AGG | + | chr1.4:8299371-8299390 | MS.gene016007:intron | 30.0% |
| !! | AACCACTTTTCATGATTACA+GGG | + | chr1.4:8299372-8299391 | MS.gene016007:intron | 30.0% |
| !! | TGCTTTGGCTTTGTTTAATT+GGG | + | chr1.4:8298615-8298634 | MS.gene016007:CDS | 30.0% |
| !! | TTGCTGTTTCATTAGAACAA+TGG | - | chr1.4:8299266-8299285 | None:intergenic | 30.0% |
| AACAGAACGCTCATACAATA+AGG | - | chr1.4:8299133-8299152 | None:intergenic | 35.0% | |
| AACCCTGTAATCATGAAAAG+TGG | - | chr1.4:8299377-8299396 | None:intergenic | 35.0% | |
| AATCAGAATCAAACCCAACA+TGG | - | chr1.4:8298474-8298493 | None:intergenic | 35.0% | |
| AGAAGAGCTTTACTATACCT+CGG | - | chr1.4:8297650-8297669 | None:intergenic | 35.0% | |
| AGGAAGATAAAGTGGTTACT+AGG | + | chr1.4:8298065-8298084 | MS.gene016007:CDS | 35.0% | |
| ATCTGGATATTCATGAGGTT+GGG | + | chr1.4:8298497-8298516 | MS.gene016007:CDS | 35.0% | |
| CATGGAATGAGATGTATGAT+GGG | + | chr1.4:8299420-8299439 | MS.gene016007:CDS | 35.0% | |
| GGTGAATTGTAGTATGAAGT+TGG | + | chr1.4:8298135-8298154 | MS.gene016007:CDS | 35.0% | |
| GGTTGGGATGAAGATATATT+CGG | + | chr1.4:8298513-8298532 | MS.gene016007:CDS | 35.0% | |
| GTTGAAAAGTTTGAACTAGC+CGG | + | chr1.4:8299204-8299223 | MS.gene016007:CDS | 35.0% | |
| TAATAGGATGATTACTGTGG+AGG | + | chr1.4:8298414-8298433 | MS.gene016007:CDS | 35.0% | |
| TAGTTTGAGGATTACTATGG+AGG | + | chr1.4:8297781-8297800 | MS.gene016007:CDS | 35.0% | |
| TATCTGGATATTCATGAGGT+TGG | + | chr1.4:8298496-8298515 | MS.gene016007:CDS | 35.0% | |
| TCTAATGAAACAGCAATGGA+AGG | + | chr1.4:8299270-8299289 | MS.gene016007:CDS | 35.0% | |
| TCTGTTGTGGAATTTAAGCT+AGG | + | chr1.4:8299147-8299166 | MS.gene016007:CDS | 35.0% | |
| TGCAGATAAGTTTCAAGAGA+TGG | + | chr1.4:8298591-8298610 | MS.gene016007:CDS | 35.0% | |
| TTACTACTACTTCTGAGTTG+AGG | + | chr1.4:8298242-8298261 | MS.gene016007:CDS | 35.0% | |
| TTCGTATCTGGATATTCATG+AGG | + | chr1.4:8298492-8298511 | MS.gene016007:CDS | 35.0% | |
| ! | GCAACATCTATGTGGTTTTT+GGG | - | chr1.4:8297530-8297549 | None:intergenic | 35.0% |
| ! | GTATATTACACAGGTGGATT+TGG | + | chr1.4:8298303-8298322 | MS.gene016007:CDS | 35.0% |
| ! | GTTTGATTCTGATTCGTATC+TGG | + | chr1.4:8298480-8298499 | MS.gene016007:CDS | 35.0% |
| ! | TGCAACATCTATGTGGTTTT+TGG | - | chr1.4:8297531-8297550 | None:intergenic | 35.0% |
| ! | TGGAGATTCTTGATAGTTTG+AGG | + | chr1.4:8297768-8297787 | MS.gene016007:CDS | 35.0% |
| ! | TTAGAGAAAATGGGTTTGCA+CGG | + | chr1.4:8299027-8299046 | MS.gene016007:CDS | 35.0% |
| ! | TTGTGACATGTTGATGAACA+TGG | - | chr1.4:8297417-8297436 | None:intergenic | 35.0% |
| !! | AGGACTGTGAAGTTGATATA+TGG | + | chr1.4:8298085-8298104 | MS.gene016007:CDS | 35.0% |
| !! | CTGCTTTGGCTTTGTTTAAT+TGG | + | chr1.4:8298614-8298633 | MS.gene016007:CDS | 35.0% |
| !! | CTTTGGCTTTGTTTAATTGG+GGG | + | chr1.4:8298617-8298636 | MS.gene016007:CDS | 35.0% |
| !! | GCTTTGGCTTTGTTTAATTG+GGG | + | chr1.4:8298616-8298635 | MS.gene016007:CDS | 35.0% |
| !! | TGTGAAGTTGATATATGGAG+AGG | + | chr1.4:8298090-8298109 | MS.gene016007:CDS | 35.0% |
| !!! | CTCCTTCGTTGTCTTTTTTT+TGG | - | chr1.4:8297472-8297491 | None:intergenic | 35.0% |
| !!! | CTCGTTTTTTCATCATAGCA+CGG | - | chr1.4:8298337-8298356 | None:intergenic | 35.0% |
| !!! | GTTTTTGGGTAAGAGTTTGA+GGG | - | chr1.4:8297516-8297535 | None:intergenic | 35.0% |
| AAGATCAGGCTTCAAAGATG+AGG | + | chr1.4:8299082-8299101 | MS.gene016007:CDS | 40.0% | |
| AATGTCAGTTGTAGAAGCTC+CGG | - | chr1.4:8299226-8299245 | None:intergenic | 40.0% | |
| ACCCAGTTGCATATAACACA+TGG | - | chr1.4:8297573-8297592 | None:intergenic | 40.0% | |
| ACTATCAAGAATCTCCAACG+CGG | - | chr1.4:8297765-8297784 | None:intergenic | 40.0% | |
| AGGATTACTATGGAGGAGAA+AGG | + | chr1.4:8297788-8297807 | MS.gene016007:CDS | 40.0% | |
| AGGCTGTTTAAGAACCATGT+TGG | + | chr1.4:8298457-8298476 | MS.gene016007:CDS | 40.0% | |
| ATTGAGGAACAGCGTTTGAA+CGG | + | chr1.4:8298973-8298992 | MS.gene016007:CDS | 40.0% | |
| ATTGTATGAGCGTTCTGTTG+TGG | + | chr1.4:8299134-8299153 | MS.gene016007:CDS | 40.0% | |
| CATATAACACATGGCCATGT+TGG | - | chr1.4:8297564-8297583 | None:intergenic | 40.0% | |
| GAAACCAGCTGGAAAAAAGA+AGG | + | chr1.4:8297316-8297335 | MS.gene016007:CDS | 40.0% | |
| GAAGATATATTCGGAGGCAA+TGG | + | chr1.4:8298522-8298541 | MS.gene016007:CDS | 40.0% | |
| GAAGATGTGCAACATCTATG+TGG | - | chr1.4:8297538-8297557 | None:intergenic | 40.0% | |
| GATTCGGCTGTATATTACAC+AGG | + | chr1.4:8298294-8298313 | MS.gene016007:CDS | 40.0% | |
| GCATGGAATGAGATGTATGA+TGG | + | chr1.4:8299419-8299438 | MS.gene016007:CDS | 40.0% | |
| GCCATGTGTTATATGCAACT+GGG | + | chr1.4:8297569-8297588 | MS.gene016007:CDS | 40.0% | |
| GCGGTTTAGGAAAGTTGTTA+GGG | + | chr1.4:8297874-8297893 | MS.gene016007:CDS | 40.0% | |
| GGAAAAAGGGATGTTGATGT+GGG | + | chr1.4:8298945-8298964 | MS.gene016007:CDS | 40.0% | |
| GGATTACTATGGAGGAGAAA+GGG | + | chr1.4:8297789-8297808 | MS.gene016007:CDS | 40.0% | |
| GGCTGTTTAAGAACCATGTT+GGG | + | chr1.4:8298458-8298477 | MS.gene016007:CDS | 40.0% | |
| GGGTAAAGATTCGAAGGATA+AGG | + | chr1.4:8298018-8298037 | MS.gene016007:CDS | 40.0% | |
| GGGTAATAGGATGATTACTG+TGG | + | chr1.4:8298411-8298430 | MS.gene016007:CDS | 40.0% | |
| GTGAAGTATAAGGATAGGGA+AGG | + | chr1.4:8298205-8298224 | MS.gene016007:CDS | 40.0% | |
| TAAGCTAGGACTACCAACAT+GGG | + | chr1.4:8299161-8299180 | MS.gene016007:CDS | 40.0% | |
| TAAGGATAGGGAAGGTGATT+TGG | + | chr1.4:8298213-8298232 | MS.gene016007:CDS | 40.0% | |
| TAGAAGAGCTAAGTGTTACG+AGG | + | chr1.4:8297670-8297689 | MS.gene016007:CDS | 40.0% | |
| TCCAACGCGGTTGAATTATT+CGG | - | chr1.4:8297752-8297771 | None:intergenic | 40.0% | |
| TGAAAAAACGAGTAGTGGTG+AGG | + | chr1.4:8298345-8298364 | MS.gene016007:CDS | 40.0% | |
| TGAAACAGCAATGGAAGGTA+CGG | + | chr1.4:8299275-8299294 | MS.gene016007:intron | 40.0% | |
| TGAGAGATGTGATAAGGGAT+AGG | + | chr1.4:8298158-8298177 | MS.gene016007:CDS | 40.0% | |
| TGATGAGACTGAGATTGCTT+TGG | + | chr1.4:8297820-8297839 | MS.gene016007:CDS | 40.0% | |
| TGGAAAAAGGGATGTTGATG+TGG | + | chr1.4:8298944-8298963 | MS.gene016007:CDS | 40.0% | |
| TGGGATGAAGATATATTCGG+AGG | + | chr1.4:8298516-8298535 | MS.gene016007:CDS | 40.0% | |
| TGTGATAAGGGATAGGTATC+CGG | + | chr1.4:8298165-8298184 | MS.gene016007:CDS | 40.0% | |
| TGTTATATGCAACTGGGTCT+CGG | + | chr1.4:8297575-8297594 | MS.gene016007:CDS | 40.0% | |
| TTAAGCTAGGACTACCAACA+TGG | + | chr1.4:8299160-8299179 | MS.gene016007:CDS | 40.0% | |
| ! | AAGAAAGGGCATAAAGGAGA+AGG | + | chr1.4:8297914-8297933 | MS.gene016007:CDS | 40.0% |
| ! | ACAATAAGGTGCCCCATAAA+AGG | - | chr1.4:8299119-8299138 | None:intergenic | 40.0% |
| ! | GTTGGTGAGAGATGTGATAA+GGG | + | chr1.4:8298153-8298172 | MS.gene016007:CDS | 40.0% |
| ! | TACACAGGTGGATTTGGATA+TGG | + | chr1.4:8298309-8298328 | MS.gene016007:CDS | 40.0% |
| ! | TTCTGAAGAAGCTGAAGATC+AGG | + | chr1.4:8299068-8299087 | MS.gene016007:CDS | 40.0% |
| !! | AGTTGGTGAGAGATGTGATA+AGG | + | chr1.4:8298152-8298171 | MS.gene016007:CDS | 40.0% |
| !!! | GGTTTTTGGGTAAGAGTTTG+AGG | - | chr1.4:8297517-8297536 | None:intergenic | 40.0% |
| !!! | TGTTCCTTCTTTTTTCCAGC+TGG | - | chr1.4:8297323-8297342 | None:intergenic | 40.0% |
| AAAAGGGATGTTGATGTGGG+AGG | + | chr1.4:8298948-8298967 | MS.gene016007:CDS | 45.0% | |
| AACATGGGAGGAATGTTTGG+AGG | + | chr1.4:8299176-8299195 | MS.gene016007:CDS | 45.0% | |
| AATCAAACCGGACTTCTACG+AGG | + | chr1.4:8298786-8298805 | MS.gene016007:CDS | 45.0% | |
| AATGGTTCGAGTCGGAAAGT+TGG | - | chr1.4:8299461-8299480 | None:intergenic | 45.0% | |
| ACCAACATGGGAGGAATGTT+TGG | + | chr1.4:8299173-8299192 | MS.gene016007:CDS | 45.0% | |
| ACTGTTGATACCCAAGAGCT+AGG | - | chr1.4:8298816-8298835 | None:intergenic | 45.0% | |
| ATCAAACCGGACTTCTACGA+GGG | + | chr1.4:8298787-8298806 | MS.gene016007:CDS | 45.0% | |
| CAGAGGACAGCATGGAAAAA+GGG | + | chr1.4:8298932-8298951 | MS.gene016007:CDS | 45.0% | |
| CGCGGTTTAGGAAAGTTGTT+AGG | + | chr1.4:8297873-8297892 | MS.gene016007:CDS | 45.0% | |
| GACGAAACAATGGTTCGAGT+CGG | - | chr1.4:8299469-8299488 | None:intergenic | 45.0% | |
| GACTCGAACCATTGTTTCGT+CGG | + | chr1.4:8299468-8299487 | MS.gene016007:CDS | 45.0% | |
| GAGGATTCAGTGACGAATGA+TGG | + | chr1.4:8298544-8298563 | MS.gene016007:CDS | 45.0% | |
| GATAGGTATCCGGGGTTAAA+GGG | + | chr1.4:8298175-8298194 | MS.gene016007:CDS | 45.0% | |
| GATATATTCGGAGGCAATGG+AGG | + | chr1.4:8298525-8298544 | MS.gene016007:CDS | 45.0% | |
| GGAGCTTCTACAACTGACAT+TGG | + | chr1.4:8299225-8299244 | MS.gene016007:CDS | 45.0% | |
| GGATGATTACTGTGGAGGAA+TGG | + | chr1.4:8298419-8298438 | MS.gene016007:CDS | 45.0% | |
| GGCCATGTGTTATATGCAAC+TGG | + | chr1.4:8297568-8297587 | MS.gene016007:CDS | 45.0% | |
| GGGCGTTCTTGTGAAGTATA+AGG | + | chr1.4:8298195-8298214 | MS.gene016007:CDS | 45.0% | |
| GGGGAATGTTCACTTGTCTA+AGG | + | chr1.4:8298636-8298655 | MS.gene016007:CDS | 45.0% | |
| GGTGAAGGGTAAAGATTCGA+AGG | + | chr1.4:8298012-8298031 | MS.gene016007:CDS | 45.0% | |
| GGTTCTGCAGCTCTATAACA+AGG | + | chr1.4:8298909-8298928 | MS.gene016007:CDS | 45.0% | |
| GTGATAAGGGATAGGTATCC+GGG | + | chr1.4:8298166-8298185 | MS.gene016007:CDS | 45.0% | |
| GTTTCAAGAGATGGCTGCTT+TGG | + | chr1.4:8298600-8298619 | MS.gene016007:CDS | 45.0% | |
| TCCAAACATTCCTCCCATGT+TGG | - | chr1.4:8299177-8299196 | None:intergenic | 45.0% | |
| TCCAAGACTCCATTACATCC+TGG | + | chr1.4:8299496-8299515 | MS.gene016007:CDS | 45.0% | |
| TCGATGACATAGTGCAAGCA+TGG | + | chr1.4:8299402-8299421 | MS.gene016007:CDS | 45.0% | |
| TCGGCTGTATATTACACAGG+TGG | + | chr1.4:8298297-8298316 | MS.gene016007:CDS | 45.0% | |
| TCTCTCGAGCATGTTAAAGC+TGG | + | chr1.4:8298703-8298722 | MS.gene016007:CDS | 45.0% | |
| TGATAAGGGATAGGTATCCG+GGG | + | chr1.4:8298167-8298186 | MS.gene016007:CDS | 45.0% | |
| TGCACATCTTCACACCAACA+TGG | + | chr1.4:8297547-8297566 | MS.gene016007:CDS | 45.0% | |
| TTGAGCAAGCAAAGCTATGC+TGG | + | chr1.4:8298836-8298855 | MS.gene016007:CDS | 45.0% | |
| ! | ATGGGCTACGAAGGAGTATA+AGG | + | chr1.4:8298732-8298751 | MS.gene016007:CDS | 45.0% |
| ! | ATGTTCACTTGTCTAAGGCG+AGG | + | chr1.4:8298641-8298660 | MS.gene016007:CDS | 45.0% |
| ! | GAAACAGCAATGGAAGGTAC+GGG | + | chr1.4:8299276-8299295 | MS.gene016007:intron | 45.0% |
| ! | GGAATGAGATGTATGATGGG+TGG | + | chr1.4:8299423-8299442 | MS.gene016007:CDS | 45.0% |
| ! | GTCATGTGCTTGGTTCGATT+CGG | + | chr1.4:8298278-8298297 | MS.gene016007:CDS | 45.0% |
| ! | TATCGAAGTTGGCCCTTTTG+AGG | + | chr1.4:8298885-8298904 | MS.gene016007:CDS | 45.0% |
| ! | TCCAGGATGTAATGGAGTCT+TGG | - | chr1.4:8299500-8299519 | None:intergenic | 45.0% |
| ! | TCTGAGTTGAGGTTAGCTGA+GGG | + | chr1.4:8298253-8298272 | MS.gene016007:CDS | 45.0% |
| ! | TTCTGAGTTGAGGTTAGCTG+AGG | + | chr1.4:8298252-8298271 | MS.gene016007:CDS | 45.0% |
| !! | AATGGCTTGTTCAGTTTGCG+AGG | + | chr1.4:8298437-8298456 | MS.gene016007:CDS | 45.0% |
| !! | AGAAGGAGATAAGGGTGTTG+GGG | + | chr1.4:8298390-8298409 | MS.gene016007:CDS | 45.0% |
| !! | AGTGTTACGAGGCGTTGAAT+CGG | + | chr1.4:8297681-8297700 | MS.gene016007:CDS | 45.0% |
| !! | ATAAGGGTGTTGGGGGTAAT+AGG | + | chr1.4:8298398-8298417 | MS.gene016007:CDS | 45.0% |
| !! | GAGAAGGAGATAAGGGTGTT+GGG | + | chr1.4:8298389-8298408 | MS.gene016007:CDS | 45.0% |
| !! | TGGATATGAATGGGCTACGA+AGG | + | chr1.4:8298723-8298742 | MS.gene016007:CDS | 45.0% |
| ACAAGAACGCCCTTTAACCC+CGG | - | chr1.4:8298187-8298206 | None:intergenic | 50.0% | |
| AGCTGCAGAACCTCCTCAAA+AGG | - | chr1.4:8298901-8298920 | None:intergenic | 50.0% | |
| GAGAAGAAAGCCGCCAATGT+TGG | + | chr1.4:8297968-8297987 | MS.gene016007:CDS | 50.0% | |
| GCAGAGGACAGCATGGAAAA+AGG | + | chr1.4:8298931-8298950 | MS.gene016007:CDS | 50.0% | |
| GCAGCTCTATAACAAGGCAG+AGG | + | chr1.4:8298915-8298934 | MS.gene016007:CDS | 50.0% | |
| GCCGAATAATTCAACCGCGT+TGG | + | chr1.4:8297748-8297767 | MS.gene016007:CDS | 50.0% | |
| GCTGCAGAACCTCCTCAAAA+GGG | - | chr1.4:8298900-8298919 | None:intergenic | 50.0% | |
| GGATAGGTATCCGGGGTTAA+AGG | + | chr1.4:8298174-8298193 | MS.gene016007:CDS | 50.0% | |
| GGGGTTGGAGAAGGAGATAA+GGG | + | chr1.4:8298382-8298401 | MS.gene016007:CDS | 50.0% | |
| GTTGATGTGGGAGGAGATTG+AGG | + | chr1.4:8298957-8298976 | MS.gene016007:CDS | 50.0% | |
| TAACAAGGCAGAGGACAGCA+TGG | + | chr1.4:8298924-8298943 | MS.gene016007:CDS | 50.0% | |
| TATTAGATGGGCGCAGTTGC+CGG | + | chr1.4:8298114-8298133 | MS.gene016007:CDS | 50.0% | |
| TGGGGTTGGAGAAGGAGATA+AGG | + | chr1.4:8298381-8298400 | MS.gene016007:CDS | 50.0% | |
| ! | GGAGAAGGAGATAAGGGTGT+TGG | + | chr1.4:8298388-8298407 | MS.gene016007:CDS | 50.0% |
| ! | GGCGTTGAATCGGTTGGATT+TGG | + | chr1.4:8297691-8297710 | MS.gene016007:CDS | 50.0% |
| ! | GGGTTTGCACGGTCTTTTCA+GGG | + | chr1.4:8299038-8299057 | MS.gene016007:CDS | 50.0% |
| ! | TGGGTTTGCACGGTCTTTTC+AGG | + | chr1.4:8299037-8299056 | MS.gene016007:CDS | 50.0% |
| ! | TTCACTTGTCTAAGGCGAGG+AGG | + | chr1.4:8298644-8298663 | MS.gene016007:CDS | 50.0% |
| !! | CGAGTGCCTTTTCAGGAAGA+CGG | + | chr1.4:8298667-8298686 | MS.gene016007:CDS | 50.0% |
| !! | GAAGGAGATAAGGGTGTTGG+GGG | + | chr1.4:8298391-8298410 | MS.gene016007:CDS | 50.0% |
| !! | GAGTGCCTTTTCAGGAAGAC+GGG | + | chr1.4:8298668-8298687 | MS.gene016007:CDS | 50.0% |
| !! | TTACGAGGCGTTGAATCGGT+TGG | + | chr1.4:8297685-8297704 | MS.gene016007:CDS | 50.0% |
| AAGGAGAAGGCGAGGAAGAG+AGG | + | chr1.4:8297927-8297946 | MS.gene016007:CDS | 55.0% | |
| ACGAGTAGTGGTGAGGTGAG+AGG | + | chr1.4:8298352-8298371 | MS.gene016007:CDS | 55.0% | |
| ACTTTCCTAAACCGCGCAGC+AGG | - | chr1.4:8297869-8297888 | None:intergenic | 55.0% | |
| AGGAGTCCCTCGTAGAAGTC+CGG | - | chr1.4:8298796-8298815 | None:intergenic | 55.0% | |
| AGGGCATAAAGGAGAAGGCG+AGG | + | chr1.4:8297919-8297938 | MS.gene016007:CDS | 55.0% | |
| CGAGTAGTGGTGAGGTGAGA+GGG | + | chr1.4:8298353-8298372 | MS.gene016007:CDS | 55.0% | |
| CTCGACCCGTCTTCCTGAAA+AGG | - | chr1.4:8298676-8298695 | None:intergenic | 55.0% | |
| GAGTAGTGGTGAGGTGAGAG+GGG | + | chr1.4:8298354-8298373 | MS.gene016007:CDS | 55.0% | |
| GCTAGGACTACCAACATGGG+AGG | + | chr1.4:8299164-8299183 | MS.gene016007:CDS | 55.0% | |
| GCTGAGGGTTGTCATGTGCT+TGG | + | chr1.4:8298268-8298287 | MS.gene016007:CDS | 55.0% | |
| GGAACACGCCGACGAAACAA+TGG | - | chr1.4:8299479-8299498 | None:intergenic | 55.0% | |
| GTGAGGTGAGAGGGGAGAAT+GGG | + | chr1.4:8298362-8298381 | MS.gene016007:CDS | 55.0% | |
| TGAGGTGAGAGGGGAGAATG+GGG | + | chr1.4:8298363-8298382 | MS.gene016007:CDS | 55.0% | |
| TGGGTCTCGGCGAATATCCT+CGG | + | chr1.4:8297588-8297607 | MS.gene016007:CDS | 55.0% | |
| TTGCACTCGTTAATCGCCCG+AGG | - | chr1.4:8297608-8297627 | None:intergenic | 55.0% | |
| TTGCTCTGCAAGTTTCGCCG+AGG | + | chr1.4:8297630-8297649 | MS.gene016007:CDS | 55.0% | |
| ! | ACGAGGGACTCCTAGCTCTT+GGG | + | chr1.4:8298803-8298822 | MS.gene016007:CDS | 55.0% |
| ! | TACGAGGGACTCCTAGCTCT+TGG | + | chr1.4:8298802-8298821 | MS.gene016007:CDS | 55.0% |
| !! | CGAAGTTGGCCCTTTTGAGG+AGG | + | chr1.4:8298888-8298907 | MS.gene016007:CDS | 55.0% |
| GGGGAGAATGGGGTTGGAGA+AGG | + | chr1.4:8298373-8298392 | MS.gene016007:CDS | 60.0% | |
| GGGTCTCGGCGAATATCCTC+GGG | + | chr1.4:8297589-8297608 | MS.gene016007:CDS | 60.0% | |
| GGTGAGGTGAGAGGGGAGAA+TGG | + | chr1.4:8298361-8298380 | MS.gene016007:CDS | 60.0% | |
| GTGAGAGGGGAGAATGGGGT+TGG | + | chr1.4:8298367-8298386 | MS.gene016007:CDS | 60.0% | |
| TTCCTAAACCGCGCAGCAGG+CGG | - | chr1.4:8297866-8297885 | None:intergenic | 60.0% | |
| ! | GAGGAGGCGAGTGCCTTTTC+AGG | + | chr1.4:8298660-8298679 | MS.gene016007:CDS | 60.0% |
| AAGTAGAGCCGCCTGCTGCG+CGG | + | chr1.4:8297855-8297874 | MS.gene016007:CDS | 65.0% | |
| AGCCGCCTGCTGCGCGGTTT+AGG | + | chr1.4:8297861-8297880 | MS.gene016007:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 8297311 | 8299529 | 8297311 | ID=MS.gene016007 |
| chr1.4 | mRNA | 8297311 | 8299529 | 8297311 | ID=MS.gene016007.t1;Parent=MS.gene016007 |
| chr1.4 | exon | 8297311 | 8299291 | 8297311 | ID=MS.gene016007.t1.exon1;Parent=MS.gene016007.t1 |
| chr1.4 | CDS | 8297311 | 8299291 | 8297311 | ID=cds.MS.gene016007.t1;Parent=MS.gene016007.t1 |
| chr1.4 | exon | 8299393 | 8299529 | 8299393 | ID=MS.gene016007.t1.exon2;Parent=MS.gene016007.t1 |
| chr1.4 | CDS | 8299393 | 8299529 | 8299393 | ID=cds.MS.gene016007.t1;Parent=MS.gene016007.t1 |
| Gene Sequence |
| Protein sequence |
