AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene012678

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012678.t1 MTR_4g132780 98.187 772 10 2 1 772 1 768 0.0 1550
MS.gene012678.t1 MTR_2g025130 50.806 496 147 9 261 756 51 449 7.91e-148 441
MS.gene012678.t1 MTR_1g012840 41.791 469 199 6 277 743 262 658 1.44e-111 355
MS.gene012678.t1 MTR_1g012840 41.509 159 92 1 1 158 1 159 2.35e-31 131
MS.gene012678.t1 MTR_2g451540 42.094 468 187 7 280 743 284 671 4.22e-110 352
MS.gene012678.t1 MTR_2g451540 42.953 149 84 1 16 164 17 164 3.54e-31 130
MS.gene012678.t1 MTR_7g059150 38.710 124 71 2 37 157 92 213 1.97e-19 89.4
MS.gene012678.t1 MTR_2g090135 37.097 124 73 2 37 157 95 216 6.19e-18 85.1
MS.gene012678.t1 MTR_2g090135 38.614 101 57 2 37 134 95 193 5.60e-15 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012678.t1 AT1G62390 65.854 779 215 10 1 756 1 751 0.0 929
MS.gene012678.t1 AT2G25290 37.778 720 363 13 32 743 44 686 4.52e-150 456
MS.gene012678.t1 AT2G25290 37.778 720 363 13 32 743 44 686 4.52e-150 456
MS.gene012678.t1 AT2G25290 37.778 720 363 13 32 743 44 686 4.52e-150 456
MS.gene012678.t1 AT2G25290 37.778 720 363 13 32 743 44 686 4.52e-150 456
MS.gene012678.t1 AT5G20360 34.663 727 369 15 37 749 33 667 1.28e-116 369
MS.gene012678.t1 AT5G20360 34.663 727 369 15 37 749 33 667 1.28e-116 369
MS.gene012678.t1 AT5G20360 34.263 753 383 17 15 749 39 697 1.78e-116 369
MS.gene012678.t1 AT5G20360 34.263 753 383 17 15 749 39 697 1.78e-116 369
MS.gene012678.t1 AT5G20360 34.663 727 369 15 37 749 113 747 6.76e-116 369
MS.gene012678.t1 AT5G20360 34.663 727 369 15 37 749 123 757 1.17e-115 369
MS.gene012678.t1 AT5G20360 34.663 727 369 15 37 749 123 757 1.17e-115 369
MS.gene012678.t1 AT4G32070 40.685 467 216 5 277 743 318 723 4.81e-109 350
MS.gene012678.t1 AT4G32070 41.732 127 74 0 32 158 43 169 1.33e-26 116
MS.gene012678.t1 AT4G32070 40.685 467 216 5 277 743 318 723 4.81e-109 350
MS.gene012678.t1 AT4G32070 41.732 127 74 0 32 158 43 169 1.33e-26 116
MS.gene012678.t1 AT4G30480 34.586 133 82 2 37 166 102 232 1.26e-14 75.5
MS.gene012678.t1 AT3G58620 31.538 130 83 2 37 166 446 569 1.31e-11 68.6
MS.gene012678.t1 AT3G58620 31.538 130 83 2 37 166 446 569 1.34e-11 68.6

Find 205 sgRNAs with CRISPR-Local

Find 221 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGTGTACTTTGGCTCTTC+AGG 0.248512 8.1:+1446025 MS.gene012678:CDS
CGGCATTGGCATTCTTCAAC+TGG 0.265168 8.1:+1447251 MS.gene012678:CDS
GTTGAGAAGAAGAAAGAAAC+AGG 0.268964 8.1:+1447669 MS.gene012678:CDS
GGCATCTGGGTCTTGTTCTC+TGG 0.269630 8.1:-1446425 None:intergenic
CAACCCCACCATTTGGTGTT+TGG 0.286040 8.1:-1445788 None:intergenic
TCAAGATGTGCAGTTGTTAT+TGG 0.289033 8.1:+1446124 MS.gene012678:CDS
TCCCAAGTGGAATGCAAATT+AGG 0.293568 8.1:+1447823 MS.gene012678:CDS
ACAGCAGGACCATTATTAAA+AGG 0.297119 8.1:-1446464 None:intergenic
TCTTCTTTCTTTGTTGCAGT+TGG 0.304943 8.1:-1447643 None:intergenic
GACCTGTCAACCTTGTTATT+AGG 0.310700 8.1:-1446371 None:intergenic
ACCAAATGGTGGGGTTGAAT+TGG 0.315838 8.1:+1445794 MS.gene012678:CDS
AAAGGCTTCAGGACAACTTT+AGG 0.315931 8.1:-1446446 None:intergenic
ATCTTATCAACCTCGGTATC+AGG 0.324081 8.1:-1446974 None:intergenic
CTCTAGCTCATCGGTCTTGT+TGG 0.326163 8.1:-1447995 None:intergenic
AGCCCTATCAGGATGTGTTT+TGG 0.326734 8.1:-1445934 None:intergenic
GTCTTCTGTCGTTGGAGGTC+AGG 0.334086 8.1:+1447711 MS.gene012678:CDS
GTCCGTGGTGCTCCTATTGC+TGG 0.334780 8.1:+1446275 MS.gene012678:CDS
TTTACCAGCAGACTCATCTA+AGG 0.335593 8.1:-1447311 None:intergenic
TGCAAAAGACCAATGGAGTT+TGG 0.335622 8.1:-1447482 None:intergenic
TCAGGACAACTTTAGGCATC+TGG 0.335801 8.1:-1446439 None:intergenic
ACAGAACGCTTTAAGCTTGC+AGG 0.338073 8.1:+1447880 MS.gene012678:CDS
CTATGAGGGACTGTTGGCTC+TGG 0.341431 8.1:+1447438 MS.gene012678:CDS
TTCTTCGACGCAGGCCGTGC+TGG 0.341743 8.1:-1446314 None:intergenic
GACCATTATTAAAAGGCTTC+AGG 0.343074 8.1:-1446457 None:intergenic
CAGAGATTGAGGGCTGCGTT+TGG 0.343757 8.1:+1446185 MS.gene012678:CDS
CTTCTTTCTTTGTTGCAGTT+GGG 0.350219 8.1:-1447642 None:intergenic
CGGCCTTCGCCTGCTGCGTT+AGG 0.354738 8.1:+1446242 MS.gene012678:CDS
TAAGGCTGCTTCAAAGTTCC+AGG 0.355515 8.1:+1447222 MS.gene012678:CDS
GGTCAAGGAAAAGTATTCTT+TGG 0.356554 8.1:+1447372 MS.gene012678:CDS
TCATTTATCTCATCCTTGAT+TGG 0.361253 8.1:-1448031 None:intergenic
AGATAAAAGTGATTCTATTT+CGG 0.361509 8.1:+1446778 MS.gene012678:CDS
AAGAAAATTATGGGGAAATC+AGG 0.361902 8.1:+1445714 None:intergenic
GAATAGAAGGTTTCAGAGTA+AGG 0.367198 8.1:+1445863 MS.gene012678:CDS
CGCCCAAAACACATCCTGAT+AGG 0.369541 8.1:+1445931 MS.gene012678:CDS
GGGCTTTGCTTCGTAGGGCT+CGG 0.370895 8.1:+1446066 MS.gene012678:CDS
CCGACAGATTCCTATCCTTC+TGG 0.372691 8.1:-1446511 None:intergenic
AGGTTCAGCCGCAATTTGTC+CGG 0.377457 8.1:+1446045 MS.gene012678:CDS
AGAGATTGAGGGCTGCGTTT+GGG 0.381653 8.1:+1446186 MS.gene012678:CDS
CAAGGATTGTGATGGTGATT+TGG 0.383636 8.1:+1446679 MS.gene012678:CDS
TGAAAGAAGAAGGGAATAGA+AGG 0.392126 8.1:+1445850 MS.gene012678:CDS
TGCAAGTCAATATGAGCATC+AGG 0.394649 8.1:-1447124 None:intergenic
ATCCAAAGCATCCTTATGAT+TGG 0.395798 8.1:-1446156 None:intergenic
GGTGCTCCTATTGCTGGATT+AGG 0.399698 8.1:+1446281 MS.gene012678:CDS
TTGTCCGGGCTTTGCTTCGT+AGG 0.400759 8.1:+1446060 MS.gene012678:CDS
TCCCAATCATAAGGATGCTT+TGG 0.400869 8.1:+1446154 MS.gene012678:CDS
TCCAATTCAACCCCACCATT+TGG 0.402916 8.1:-1445795 None:intergenic
AAAGAAAAGCCTGGAGCAAC+GGG 0.403258 8.1:+1447019 MS.gene012678:CDS
TCTGTAACTTCAGTAACTTC+AGG 0.406104 8.1:-1446938 None:intergenic
ATGCCAATGCCGCCACCTCC+TGG 0.407999 8.1:-1447240 None:intergenic
ATCACAGATTCATAATCAAT+AGG 0.414155 8.1:-1445999 None:intergenic
GGAGCAGGAGCCACCTTTGT+TGG 0.416587 8.1:+1446832 MS.gene012678:CDS
CATATTGACTTGCATGAGCT+TGG 0.418574 8.1:+1447133 MS.gene012678:CDS
TACAAAAGGTGATGATAAAA+AGG 0.419380 8.1:+1447957 MS.gene012678:CDS
TCGTAGGGCTCGGGCGTTTG+AGG 0.421207 8.1:+1446076 MS.gene012678:CDS
TGGATATTGCTCAGAGATTG+AGG 0.427013 8.1:+1446174 MS.gene012678:CDS
TTTCAGAGTAAGGATTATAC+TGG 0.429564 8.1:+1445873 MS.gene012678:CDS
TGGCCATTTCAAATTGTTGT+TGG 0.430447 8.1:-1447462 None:intergenic
TCATTATCTCCCGTTGCTCC+AGG 0.430465 8.1:-1447028 None:intergenic
GTTCCAGGAGGTGGCGGCAT+TGG 0.433016 8.1:+1447237 MS.gene012678:CDS
GGCTTTGCTTCGTAGGGCTC+GGG 0.434118 8.1:+1446067 MS.gene012678:CDS
GGCTGCGTTTGGGCCTCGTC+AGG 0.435769 8.1:+1446196 MS.gene012678:CDS
GATCAAACCTGATTTCTATG+AGG 0.436110 8.1:+1447423 MS.gene012678:CDS
AGCACGGCCTGCGTCGAAGA+AGG 0.437490 8.1:+1446316 MS.gene012678:CDS
CCGTTGGATCCCATGTTGAC+AGG 0.437619 8.1:-1447522 None:intergenic
AACAAAGGTGGCTCCTGCTC+CGG 0.440439 8.1:-1446830 None:intergenic
TTGTTTATGATCATGACATC+AGG 0.448132 8.1:+1446564 MS.gene012678:CDS
AACAGTCCCTCATAGAAATC+AGG 0.448919 8.1:-1447430 None:intergenic
TCTAGCTCATCGGTCTTGTT+GGG 0.448987 8.1:-1447994 None:intergenic
TTCGAGTTAGATTGCACAGC+AGG 0.450987 8.1:-1446479 None:intergenic
GGATATTGCTCAGAGATTGA+GGG 0.451571 8.1:+1446175 MS.gene012678:CDS
AACTTCAAGTGGCTTATGAC+TGG 0.453663 8.1:+1447350 MS.gene012678:CDS
TCTTGTTGGGAAGTGGACTT+TGG 0.460672 8.1:-1447981 None:intergenic
GCACATGAAATGAAAGAAGA+AGG 0.462119 8.1:+1445840 MS.gene012678:CDS
TATGAGGGACTGTTGGCTCT+GGG 0.463764 8.1:+1447439 MS.gene012678:CDS
ATCTGTCGGAGGTTTCTATT+CGG 0.466887 8.1:+1446525 MS.gene012678:CDS
TCCAAAGCATCCTTATGATT+GGG 0.467802 8.1:-1446155 None:intergenic
TGATCATAAACAAGCTTCAA+TGG 0.469664 8.1:-1446554 None:intergenic
AGATCCACTTTCATCTCCCT+TGG 0.469667 8.1:-1446891 None:intergenic
GGCTTCTGATCCCAATCATA+AGG 0.472316 8.1:+1446145 MS.gene012678:CDS
ATATTGACTTGCATGAGCTT+GGG 0.472334 8.1:+1447134 MS.gene012678:CDS
GGGCCAACAACAATTTGAAA+TGG 0.474260 8.1:+1447459 MS.gene012678:CDS
CACGGACCTAATCCAGCAAT+AGG 0.475945 8.1:-1446287 None:intergenic
GCAGAAGCACCTAACGCAGC+AGG 0.476486 8.1:-1446251 None:intergenic
ATCAGGTGGTAGAAGAAAGA+AGG 0.476870 8.1:+1445731 MS.gene012678:CDS
GCCACCTTTGTTGGAAGAAG+AGG 0.478587 8.1:+1446841 MS.gene012678:CDS
TTCCTAATTTGCATTCCACT+TGG 0.481107 8.1:-1447825 None:intergenic
CTCCTAATAACAAGGTTGAC+AGG 0.481320 8.1:+1446369 MS.gene012678:CDS
TGCTTCAAAGTTCCAGGAGG+TGG 0.481900 8.1:+1447228 MS.gene012678:CDS
GAGCCCTACGAAGCAAAGCC+CGG 0.482060 8.1:-1446064 None:intergenic
TACTGATATGTGGGAGAAGT+TGG 0.484531 8.1:+1447591 MS.gene012678:CDS
TGTGATTTCTGAGTGTACTT+TGG 0.485055 8.1:+1446016 MS.gene012678:CDS
TAGGTCCGTGTTTGCCAGCA+CGG 0.489653 8.1:+1446300 MS.gene012678:CDS
AGCTCAGGATCTATTTGATA+AGG 0.490348 8.1:+1447204 MS.gene012678:CDS
GCCTCGTCAGGAAGCACAGC+AGG 0.492073 8.1:+1446208 MS.gene012678:CDS
CTGTAACTTCAGTAACTTCA+GGG 0.492671 8.1:-1446937 None:intergenic
GGTTCAGCCGCAATTTGTCC+GGG 0.494328 8.1:+1446046 MS.gene012678:CDS
TCTTCTGTCGTTGGAGGTCA+GGG 0.496390 8.1:+1447712 MS.gene012678:CDS
TCTTCCTCTTCTTCCAACAA+AGG 0.496918 8.1:-1446845 None:intergenic
AGCGTTCTGTTGCAGCATCC+AGG 0.499132 8.1:-1447867 None:intergenic
TGTCCGGGCTTTGCTTCGTA+GGG 0.499344 8.1:+1446061 MS.gene012678:CDS
GCACGGCCTGCGTCGAAGAA+GGG 0.502293 8.1:+1446317 MS.gene012678:CDS
GGCTGTTGGTAAGTATGAAT+TGG 0.502917 8.1:+1446097 MS.gene012678:CDS
GGCGAGTCTTCTGTCGTTGG+AGG 0.503882 8.1:+1447706 MS.gene012678:CDS
TTGAAATGGCCAAACTCCAT+TGG 0.504188 8.1:+1447473 MS.gene012678:CDS
TCCTCTTCTTCCAACAAAGG+TGG 0.505242 8.1:-1446842 None:intergenic
GGCATTGGCATTCTTCAACT+GGG 0.505652 8.1:+1447252 MS.gene012678:CDS
GCACCTAACGCAGCAGGCGA+AGG 0.506022 8.1:-1446245 None:intergenic
TTCAGTTCTGATCAAGTACA+AGG 0.507255 8.1:+1446661 MS.gene012678:CDS
TGTAGAAGTTAGTCCGGAGC+AGG 0.507291 8.1:+1446817 MS.gene012678:CDS
AACAGTTGAAGAGTTTCCGT+TGG 0.508342 8.1:-1447538 None:intergenic
GCTTCTGTCCAAACACCAAA+TGG 0.508934 8.1:+1445780 MS.gene012678:CDS
AGTGACAAGTGAGGAAGCTC+AGG 0.509100 8.1:+1447189 MS.gene012678:CDS
ATCAACAAGGAGGCCAATCA+AGG 0.509255 8.1:+1448018 MS.gene012678:CDS
ATCTACTGATGAACTCAGAT+TGG 0.510115 8.1:+1446712 MS.gene012678:CDS
TCATCGGTCTTGTTGGGAAG+TGG 0.515199 8.1:-1447988 None:intergenic
CAGGACAACTTTAGGCATCT+GGG 0.517129 8.1:-1446438 None:intergenic
TCCTAATTTGCATTCCACTT+GGG 0.517971 8.1:-1447824 None:intergenic
GCTCGGGCGTTTGAGGCTGT+TGG 0.518791 8.1:+1446083 MS.gene012678:CDS
GCAAATTAGGAATGGATGGT+TGG 0.521832 8.1:+1447836 MS.gene012678:CDS
CACGGCCTGCGTCGAAGAAG+GGG 0.522245 8.1:+1446318 MS.gene012678:CDS
AGCTCAAACGGTGATACAAA+AGG 0.525012 8.1:+1447943 MS.gene012678:CDS
AAAATGAGAGCCAGAAGGAT+AGG 0.530714 8.1:+1446501 MS.gene012678:CDS
ATCAAACCTGATTTCTATGA+GGG 0.531376 8.1:+1447424 MS.gene012678:CDS
GATGTTTCAAAAGAAAAGCC+TGG 0.534064 8.1:+1447010 MS.gene012678:CDS
AGCAAAGCCCGGACAAATTG+CGG 0.535303 8.1:-1446053 None:intergenic
ACAGAGGGCAAAGGAGCTAA+AGG 0.535384 8.1:+1447618 MS.gene012678:CDS
TGAAATCTGCTACTGATATG+TGG 0.535440 8.1:+1447581 MS.gene012678:CDS
AGTGGATCTCATTCTTCCCT+CGG 0.536060 8.1:+1446905 MS.gene012678:CDS
TCCTGCTGTGCTTCCTGACG+AGG 0.536302 8.1:-1446209 None:intergenic
CATCAGGCTTGCTCAGATGC+CGG 0.537347 8.1:+1446580 MS.gene012678:CDS
AACGACAGAAGACTCGCCTT+CGG 0.538485 8.1:-1447701 None:intergenic
ACATATTGTAGAAGTTAGTC+CGG 0.538956 8.1:+1446811 MS.gene012678:CDS
TGATAAGATAATAACAAAGA+AGG 0.539178 8.1:+1446988 MS.gene012678:CDS
TGATATGTGGGAGAAGTTGG+AGG 0.542485 8.1:+1447594 MS.gene012678:CDS
AAAAGAAAAGCCTGGAGCAA+CGG 0.543981 8.1:+1447018 MS.gene012678:CDS
CTTGTTGATCTCTAGCTCAT+CGG 0.544542 8.1:-1448004 None:intergenic
CTAAAGAATCACAGCTCAAA+CGG 0.544765 8.1:+1447931 MS.gene012678:CDS
TGATTTCTATGAGGGACTGT+TGG 0.545493 8.1:+1447432 MS.gene012678:CDS
ATGTTCACATGTGCGCTGCT+AGG 0.546089 8.1:+1447278 MS.gene012678:CDS
AAGAAGTGGAGATGGATGAT+TGG 0.546355 8.1:+1447056 MS.gene012678:CDS
TTCAAAGTTCCAGGAGGTGG+CGG 0.547550 8.1:+1447231 MS.gene012678:CDS
TGTTATTATCTTATCAACCT+CGG 0.548455 8.1:-1446981 None:intergenic
TCAGGTGGTAGAAGAAAGAA+GGG 0.549260 8.1:+1445732 MS.gene012678:CDS
TAGCAATTGCAAAAGACCAA+TGG 0.553654 8.1:-1447489 None:intergenic
CACATGAAATGAAAGAAGAA+GGG 0.561194 8.1:+1445841 MS.gene012678:CDS
GCATTGGCATTCTTCAACTG+GGG 0.567327 8.1:+1447253 MS.gene012678:CDS
TGAATGCAAAGAAGTGGAGA+TGG 0.567536 8.1:+1447048 MS.gene012678:CDS
CAGCAGGCGAAGGCCGACTG+TGG 0.567544 8.1:-1446235 None:intergenic
GTGACCAAGGGAGATGAAAG+TGG 0.568869 8.1:+1446887 MS.gene012678:CDS
GAAGGCGAGTCTTCTGTCGT+TGG 0.569947 8.1:+1447703 MS.gene012678:CDS
GCAGGCCGTGCTGGCAAACA+CGG 0.570124 8.1:-1446305 None:intergenic
CTGTCCAAACACCAAATGGT+GGG 0.572237 8.1:+1445784 MS.gene012678:CDS
TAAGCTTGCAGGAGCTTCTG+AGG 0.573931 8.1:+1447891 MS.gene012678:CDS
AGAAGATAGACCTGTCAACA+TGG 0.574294 8.1:+1447512 MS.gene012678:CDS
TTGAGAAGAAGAAAGAAACA+GGG 0.574394 8.1:+1447670 MS.gene012678:CDS
AGTGGAATGCAAATTAGGAA+TGG 0.579074 8.1:+1447828 MS.gene012678:CDS
GAAATCTGCTACTGATATGT+GGG 0.582332 8.1:+1447582 MS.gene012678:CDS
TGTCGGAGGTTTCTATTCGG+TGG 0.583849 8.1:+1446528 MS.gene012678:CDS
GCCCAAAACACATCCTGATA+GGG 0.587986 8.1:+1445932 MS.gene012678:CDS
CACTGAAGTTCCTGATACCG+AGG 0.590229 8.1:+1446964 MS.gene012678:CDS
GGAGAAGTTGGAGGAACAGA+GGG 0.591263 8.1:+1447603 MS.gene012678:CDS
ACTCTGAAACTGCAGTTCAC+CGG 0.593018 8.1:-1446599 None:intergenic
TTTCAGAGTACTTAGAGATG+TGG 0.594565 8.1:+1446613 MS.gene012678:CDS
TTTGGCACGAGAGAAGTATG+AGG 0.597958 8.1:+1447390 MS.gene012678:CDS
AGATAATGAATGCAAAGAAG+TGG 0.599861 8.1:+1447042 MS.gene012678:CDS
GTTGGAGGAACAGAGGGCAA+AGG 0.601122 8.1:+1447609 MS.gene012678:CDS
ATCAGAACTGAATTTGACGA+AGG 0.601722 8.1:-1446650 None:intergenic
TGACTTGCATGAGCTTGGGA+TGG 0.605109 8.1:+1447138 MS.gene012678:CDS
AGTTGTTTCTCCTAATAACA+AGG 0.606788 8.1:+1446361 MS.gene012678:CDS
GAATGCAAATTAGGAATGGA+TGG 0.608405 8.1:+1447832 MS.gene012678:CDS
CACAGCAGGATCTCCACAGT+CGG 0.611695 8.1:+1446222 MS.gene012678:CDS
TTACCAGCAGACTCATCTAA+GGG 0.611766 8.1:-1447310 None:intergenic
CCAGAAGGATAGGAATCTGT+CGG 0.613760 8.1:+1446511 MS.gene012678:CDS
ATTCCCTTAGATGAGTCTGC+TGG 0.619099 8.1:+1447307 MS.gene012678:CDS
ACTTCAAGTGGCTTATGACT+GGG 0.624534 8.1:+1447351 MS.gene012678:CDS
TTAGGTGCTTCTGCTGTCCG+TGG 0.626214 8.1:+1446260 MS.gene012678:CDS
AGGAGAAACAACTGACCCAA+CGG 0.628623 8.1:-1446351 None:intergenic
AAAATTATGGGGAAATCAGG+TGG 0.628733 8.1:+1445717 None:intergenic
CGTTGAGAATGAAGTGACCA+AGG 0.628866 8.1:+1446874 MS.gene012678:CDS
TCTGTCCAAACACCAAATGG+TGG 0.630928 8.1:+1445783 MS.gene012678:CDS
TCAACTGTTTAACAGTGCAG+AGG 0.632330 8.1:+1447552 MS.gene012678:CDS
CCTGTCAACATGGGATCCAA+CGG 0.635538 8.1:+1447522 MS.gene012678:CDS
TGTCCAAACACCAAATGGTG+GGG 0.637307 8.1:+1445785 MS.gene012678:CDS
ACGGCCTGCGTCGAAGAAGG+GGG 0.639868 8.1:+1446319 MS.gene012678:CDS
AGAAGCTGCTGAGCAAGCAG+TGG 0.642416 8.1:+1447750 MS.gene012678:CDS
CGATGAGCTAGAGATCAACA+AGG 0.643060 8.1:+1448005 MS.gene012678:CDS
AGTGGCTTATGACTGGGTCA+AGG 0.646353 8.1:+1447357 MS.gene012678:CDS
GAAGATAGACCTGTCAACAT+GGG 0.646417 8.1:+1447513 MS.gene012678:CDS
TGGGATGGAGCTATGTTCAG+AGG 0.646712 8.1:+1447153 MS.gene012678:CDS
GTCTGCTGGTAAAGATGTAG+TGG 0.654267 8.1:+1447321 MS.gene012678:CDS
AGTGGCAGAACAACTTCAAG+TGG 0.655945 8.1:+1447339 MS.gene012678:CDS
GCAAGTCAATATGAGCATCA+GGG 0.659898 8.1:-1447123 None:intergenic
GGGAGAAGTTGGAGGAACAG+AGG 0.662089 8.1:+1447602 MS.gene012678:CDS
GTTGAGAATGAAGTGACCAA+GGG 0.663815 8.1:+1446875 MS.gene012678:CDS
TTCAGGGACAGAGTCACCGA+GGG 0.668184 8.1:-1446921 None:intergenic
TGAAGAAACAGTGACAAGTG+AGG 0.673683 8.1:+1447180 MS.gene012678:CDS
GGTCAATACCAACATGTGAG+CGG 0.673952 8.1:-1447102 None:intergenic
AAACAGGGAAGTGCTACCGA+AGG 0.674314 8.1:+1447685 MS.gene012678:CDS
ATCAAGTACAAGGATTGTGA+TGG 0.683892 8.1:+1446671 MS.gene012678:CDS
GAAGGATAGGAATCTGTCGG+AGG 0.709195 8.1:+1446514 MS.gene012678:CDS
CTTCAGGGACAGAGTCACCG+AGG 0.713125 8.1:-1446922 None:intergenic
GGCTGCTTCAAAGTTCCAGG+AGG 0.723223 8.1:+1447225 MS.gene012678:CDS
GGTGGTAGAAGAAAGAAGGG+TGG 0.730439 8.1:+1445735 MS.gene012678:CDS
ATCCAGCAATAGGAGCACCA+CGG 0.747239 8.1:-1446277 None:intergenic
TGAGCTAGAGATCAACAAGG+AGG 0.759563 8.1:+1448008 MS.gene012678:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGATAAAAGTGATTCTATTT+CGG + chr8.1:1446778-1446797 MS.gene012678:CDS 20.0%
!! TGATAAGATAATAACAAAGA+AGG + chr8.1:1446988-1447007 MS.gene012678:CDS 20.0%
!!! ATCACAAATTCATCTTTTTT+GGG + chr8.1:1447780-1447799 MS.gene012678:CDS 20.0%
! ATCACAGATTCATAATCAAT+AGG - chr8.1:1446002-1446021 None:intergenic 25.0%
! TACAAAAGGTGATGATAAAA+AGG + chr8.1:1447957-1447976 MS.gene012678:CDS 25.0%
! TGTTATTATCTTATCAACCT+CGG - chr8.1:1446984-1447003 None:intergenic 25.0%
!! TTCATCTATTTTCTTGAAGA+AGG + chr8.1:1445818-1445837 MS.gene012678:CDS 25.0%
!!! GATCACAAATTCATCTTTTT+TGG + chr8.1:1447779-1447798 MS.gene012678:CDS 25.0%
!!! TCACAAATTCATCTTTTTTG+GGG + chr8.1:1447781-1447800 MS.gene012678:CDS 25.0%
ACATATTGTAGAAGTTAGTC+CGG + chr8.1:1446811-1446830 MS.gene012678:CDS 30.0%
AGATAATGAATGCAAAGAAG+TGG + chr8.1:1447042-1447061 MS.gene012678:CDS 30.0%
ATCAAACCTGATTTCTATGA+GGG + chr8.1:1447424-1447443 MS.gene012678:CDS 30.0%
CACATGAAATGAAAGAAGAA+GGG + chr8.1:1445841-1445860 MS.gene012678:CDS 30.0%
TGATCATAAACAAGCTTCAA+TGG - chr8.1:1446557-1446576 None:intergenic 30.0%
TTGAGAAGAAGAAAGAAACA+GGG + chr8.1:1447670-1447689 MS.gene012678:CDS 30.0%
TTGTTTATGATCATGACATC+AGG + chr8.1:1446564-1446583 MS.gene012678:CDS 30.0%
TTTCAGAGTAAGGATTATAC+TGG + chr8.1:1445873-1445892 MS.gene012678:CDS 30.0%
!! AGTTGTTTCTCCTAATAACA+AGG + chr8.1:1446361-1446380 MS.gene012678:CDS 30.0%
ACAGCAGGACCATTATTAAA+AGG - chr8.1:1446467-1446486 None:intergenic 35.0%
AGCTCAGGATCTATTTGATA+AGG + chr8.1:1447204-1447223 MS.gene012678:CDS 35.0%
AGTGGAATGCAAATTAGGAA+TGG + chr8.1:1447828-1447847 MS.gene012678:CDS 35.0%
ATCAAGTACAAGGATTGTGA+TGG + chr8.1:1446671-1446690 MS.gene012678:CDS 35.0%
ATCAGAACTGAATTTGACGA+AGG - chr8.1:1446653-1446672 None:intergenic 35.0%
ATCTACTGATGAACTCAGAT+TGG + chr8.1:1446712-1446731 MS.gene012678:CDS 35.0%
CTAAAGAATCACAGCTCAAA+CGG + chr8.1:1447931-1447950 MS.gene012678:CDS 35.0%
CTGTAACTTCAGTAACTTCA+GGG - chr8.1:1446940-1446959 None:intergenic 35.0%
CTTCTTTCTTTGTTGCAGTT+GGG - chr8.1:1447645-1447664 None:intergenic 35.0%
GAAATCTGCTACTGATATGT+GGG + chr8.1:1447582-1447601 MS.gene012678:CDS 35.0%
GAATAGAAGGTTTCAGAGTA+AGG + chr8.1:1445863-1445882 MS.gene012678:CDS 35.0%
GAATGCAAATTAGGAATGGA+TGG + chr8.1:1447832-1447851 MS.gene012678:CDS 35.0%
GACCATTATTAAAAGGCTTC+AGG - chr8.1:1446460-1446479 None:intergenic 35.0%
GATCAAACCTGATTTCTATG+AGG + chr8.1:1447423-1447442 MS.gene012678:CDS 35.0%
GATGTTTCAAAAGAAAAGCC+TGG + chr8.1:1447010-1447029 MS.gene012678:CDS 35.0%
GCACATGAAATGAAAGAAGA+AGG + chr8.1:1445840-1445859 MS.gene012678:CDS 35.0%
GTTGAGAAGAAGAAAGAAAC+AGG + chr8.1:1447669-1447688 MS.gene012678:CDS 35.0%
TAGCAATTGCAAAAGACCAA+TGG - chr8.1:1447492-1447511 None:intergenic 35.0%
TCAAGATGTGCAGTTGTTAT+TGG + chr8.1:1446124-1446143 MS.gene012678:CDS 35.0%
TCTGTAACTTCAGTAACTTC+AGG - chr8.1:1446941-1446960 None:intergenic 35.0%
TCTTCTTTCTTTGTTGCAGT+TGG - chr8.1:1447646-1447665 None:intergenic 35.0%
TGAAAGAAGAAGGGAATAGA+AGG + chr8.1:1445850-1445869 MS.gene012678:CDS 35.0%
TGAAATCTGCTACTGATATG+TGG + chr8.1:1447581-1447600 MS.gene012678:CDS 35.0%
TGGCCATTTCAAATTGTTGT+TGG - chr8.1:1447465-1447484 None:intergenic 35.0%
TGTGATTTCTGAGTGTACTT+TGG + chr8.1:1446016-1446035 MS.gene012678:CDS 35.0%
! ATCCAAAGCATCCTTATGAT+TGG - chr8.1:1446159-1446178 None:intergenic 35.0%
! GTCCTGAAGCCTTTTAATAA+TGG + chr8.1:1446455-1446474 MS.gene012678:CDS 35.0%
! TCCAAAGCATCCTTATGATT+GGG - chr8.1:1446158-1446177 None:intergenic 35.0%
! TCCTAATTTGCATTCCACTT+GGG - chr8.1:1447827-1447846 None:intergenic 35.0%
! TTCAGTTCTGATCAAGTACA+AGG + chr8.1:1446661-1446680 MS.gene012678:CDS 35.0%
! TTCCTAATTTGCATTCCACT+TGG - chr8.1:1447828-1447847 None:intergenic 35.0%
! TTTCAGAGTACTTAGAGATG+TGG + chr8.1:1446613-1446632 MS.gene012678:CDS 35.0%
!! ATATTGACTTGCATGAGCTT+GGG + chr8.1:1447134-1447153 MS.gene012678:CDS 35.0%
!! GGTCAAGGAAAAGTATTCTT+TGG + chr8.1:1447372-1447391 MS.gene012678:CDS 35.0%
!!! TTCTGAGGCAGATATTTTGA+TGG + chr8.1:1447906-1447925 MS.gene012678:CDS 35.0%
AAAAGAAAAGCCTGGAGCAA+CGG + chr8.1:1447018-1447037 MS.gene012678:CDS 40.0%
AAAATGAGAGCCAGAAGGAT+AGG + chr8.1:1446501-1446520 MS.gene012678:CDS 40.0%
AAAGGCTTCAGGACAACTTT+AGG - chr8.1:1446449-1446468 None:intergenic 40.0%
AACAGTCCCTCATAGAAATC+AGG - chr8.1:1447433-1447452 None:intergenic 40.0%
AACAGTTGAAGAGTTTCCGT+TGG - chr8.1:1447541-1447560 None:intergenic 40.0%
AACTTCAAGTGGCTTATGAC+TGG + chr8.1:1447350-1447369 MS.gene012678:CDS 40.0%
AAGAAGTGGAGATGGATGAT+TGG + chr8.1:1447056-1447075 MS.gene012678:CDS 40.0%
ACTTCAAGTGGCTTATGACT+GGG + chr8.1:1447351-1447370 MS.gene012678:CDS 40.0%
AGAAGATAGACCTGTCAACA+TGG + chr8.1:1447512-1447531 MS.gene012678:CDS 40.0%
AGCTCAAACGGTGATACAAA+AGG + chr8.1:1447943-1447962 MS.gene012678:CDS 40.0%
ATCAGGTGGTAGAAGAAAGA+AGG + chr8.1:1445731-1445750 MS.gene012678:CDS 40.0%
ATCTGTCGGAGGTTTCTATT+CGG + chr8.1:1446525-1446544 MS.gene012678:CDS 40.0%
ATCTTATCAACCTCGGTATC+AGG - chr8.1:1446977-1446996 None:intergenic 40.0%
CTCCTAATAACAAGGTTGAC+AGG + chr8.1:1446369-1446388 MS.gene012678:CDS 40.0%
GAAGATAGACCTGTCAACAT+GGG + chr8.1:1447513-1447532 MS.gene012678:CDS 40.0%
GCAAATTAGGAATGGATGGT+TGG + chr8.1:1447836-1447855 MS.gene012678:CDS 40.0%
GCAAGTCAATATGAGCATCA+GGG - chr8.1:1447126-1447145 None:intergenic 40.0%
GGATATTGCTCAGAGATTGA+GGG + chr8.1:1446175-1446194 MS.gene012678:CDS 40.0%
GGGCCAACAACAATTTGAAA+TGG + chr8.1:1447459-1447478 MS.gene012678:CDS 40.0%
GTTGAGAATGAAGTGACCAA+GGG + chr8.1:1446875-1446894 MS.gene012678:CDS 40.0%
TACTGATATGTGGGAGAAGT+TGG + chr8.1:1447591-1447610 MS.gene012678:CDS 40.0%
TCAACTGTTTAACAGTGCAG+AGG + chr8.1:1447552-1447571 MS.gene012678:CDS 40.0%
TCAGGTGGTAGAAGAAAGAA+GGG + chr8.1:1445732-1445751 MS.gene012678:CDS 40.0%
TCCCAAGTGGAATGCAAATT+AGG + chr8.1:1447823-1447842 MS.gene012678:CDS 40.0%
TCCCAATCATAAGGATGCTT+TGG + chr8.1:1446154-1446173 MS.gene012678:CDS 40.0%
TCTTCCTCTTCTTCCAACAA+AGG - chr8.1:1446848-1446867 None:intergenic 40.0%
TGAAGAAACAGTGACAAGTG+AGG + chr8.1:1447180-1447199 MS.gene012678:CDS 40.0%
TGAATGCAAAGAAGTGGAGA+TGG + chr8.1:1447048-1447067 MS.gene012678:CDS 40.0%
TGATTTCTATGAGGGACTGT+TGG + chr8.1:1447432-1447451 MS.gene012678:CDS 40.0%
TGCAAAAGACCAATGGAGTT+TGG - chr8.1:1447485-1447504 None:intergenic 40.0%
TGCAAGTCAATATGAGCATC+AGG - chr8.1:1447127-1447146 None:intergenic 40.0%
TGGATATTGCTCAGAGATTG+AGG + chr8.1:1446174-1446193 MS.gene012678:CDS 40.0%
TTACCAGCAGACTCATCTAA+GGG - chr8.1:1447313-1447332 None:intergenic 40.0%
TTGAAATGGCCAAACTCCAT+TGG + chr8.1:1447473-1447492 MS.gene012678:CDS 40.0%
TTTACCAGCAGACTCATCTA+AGG - chr8.1:1447314-1447333 None:intergenic 40.0%
! CAAGGATTGTGATGGTGATT+TGG + chr8.1:1446679-1446698 MS.gene012678:CDS 40.0%
! CTTGTTGATCTCTAGCTCAT+CGG - chr8.1:1448007-1448026 None:intergenic 40.0%
! GCTTTTCGAAAAATCCCAAG+TGG + chr8.1:1447810-1447829 MS.gene012678:CDS 40.0%
! GGCTGTTGGTAAGTATGAAT+TGG + chr8.1:1446097-1446116 MS.gene012678:CDS 40.0%
! GTTTTGCTGCCAACTGAAAA+TGG + chr8.1:1446401-1446420 MS.gene012678:CDS 40.0%
! TTCTCTGGACCATTTTCAGT+TGG - chr8.1:1446413-1446432 None:intergenic 40.0%
!! CATATTGACTTGCATGAGCT+TGG + chr8.1:1447133-1447152 MS.gene012678:CDS 40.0%
!! GACCTGTCAACCTTGTTATT+AGG - chr8.1:1446374-1446393 None:intergenic 40.0%
!!! GGCTGTTTTTCACAGCAATA+GGG + chr8.1:1445953-1445972 MS.gene012678:CDS 40.0%
AAAGAAAAGCCTGGAGCAAC+GGG + chr8.1:1447019-1447038 MS.gene012678:CDS 45.0%
AGATCCACTTTCATCTCCCT+TGG - chr8.1:1446894-1446913 None:intergenic 45.0%
AGGAGAAACAACTGACCCAA+CGG - chr8.1:1446354-1446373 None:intergenic 45.0%
AGTGGATCTCATTCTTCCCT+CGG + chr8.1:1446905-1446924 MS.gene012678:CDS 45.0%
AGTGGCAGAACAACTTCAAG+TGG + chr8.1:1447339-1447358 MS.gene012678:CDS 45.0%
ATCAACAAGGAGGCCAATCA+AGG + chr8.1:1448018-1448037 MS.gene012678:CDS 45.0%
ATTCCCTTAGATGAGTCTGC+TGG + chr8.1:1447307-1447326 MS.gene012678:CDS 45.0%
CAGGACAACTTTAGGCATCT+GGG - chr8.1:1446441-1446460 None:intergenic 45.0%
CCAGAAGGATAGGAATCTGT+CGG + chr8.1:1446511-1446530 MS.gene012678:CDS 45.0%
CGATGAGCTAGAGATCAACA+AGG + chr8.1:1448005-1448024 MS.gene012678:CDS 45.0%
CGTTGAGAATGAAGTGACCA+AGG + chr8.1:1446874-1446893 MS.gene012678:CDS 45.0%
CTCGAAAAATGAGAGCCAGA+AGG + chr8.1:1446496-1446515 MS.gene012678:CDS 45.0%
CTGTCCAAACACCAAATGGT+GGG + chr8.1:1445784-1445803 MS.gene012678:CDS 45.0%
CTGTGAAAAACAGCCCTATC+AGG - chr8.1:1445948-1445967 None:intergenic 45.0%
GCCCAAAACACATCCTGATA+GGG + chr8.1:1445932-1445951 MS.gene012678:CDS 45.0%
GCTTCTGTCCAAACACCAAA+TGG + chr8.1:1445780-1445799 MS.gene012678:CDS 45.0%
GGATGGTTGGAAGAAAAACC+TGG + chr8.1:1447849-1447868 MS.gene012678:CDS 45.0%
GGCTTCTGATCCCAATCATA+AGG + chr8.1:1446145-1446164 MS.gene012678:CDS 45.0%
GGTCAATACCAACATGTGAG+CGG - chr8.1:1447105-1447124 None:intergenic 45.0%
GTCTGCTGGTAAAGATGTAG+TGG + chr8.1:1447321-1447340 MS.gene012678:CDS 45.0%
TAAGGCTGCTTCAAAGTTCC+AGG + chr8.1:1447222-1447241 MS.gene012678:CDS 45.0%
TCAGGACAACTTTAGGCATC+TGG - chr8.1:1446442-1446461 None:intergenic 45.0%
TCCAATTCAACCCCACCATT+TGG - chr8.1:1445798-1445817 None:intergenic 45.0%
TCCTCTTCTTCCAACAAAGG+TGG - chr8.1:1446845-1446864 None:intergenic 45.0%
TCTGTCCAAACACCAAATGG+TGG + chr8.1:1445783-1445802 MS.gene012678:CDS 45.0%
TGAGCTAGAGATCAACAAGG+AGG + chr8.1:1448008-1448027 MS.gene012678:CDS 45.0%
TGATATGTGGGAGAAGTTGG+AGG + chr8.1:1447594-1447613 MS.gene012678:CDS 45.0%
TGTCCAAACACCAAATGGTG+GGG + chr8.1:1445785-1445804 MS.gene012678:CDS 45.0%
! ACAGAACGCTTTAAGCTTGC+AGG + chr8.1:1447880-1447899 MS.gene012678:CDS 45.0%
! ACCAAATGGTGGGGTTGAAT+TGG + chr8.1:1445794-1445813 MS.gene012678:CDS 45.0%
! AGCCCTATCAGGATGTGTTT+TGG - chr8.1:1445937-1445956 None:intergenic 45.0%
! GCATTGGCATTCTTCAACTG+GGG + chr8.1:1447253-1447272 MS.gene012678:CDS 45.0%
! GCCCTATCAGGATGTGTTTT+GGG - chr8.1:1445936-1445955 None:intergenic 45.0%
! TCTTGTTGGGAAGTGGACTT+TGG - chr8.1:1447984-1448003 None:intergenic 45.0%
! TTCGAGTTAGATTGCACAGC+AGG - chr8.1:1446482-1446501 None:intergenic 45.0%
! TTTGGCACGAGAGAAGTATG+AGG + chr8.1:1447390-1447409 MS.gene012678:CDS 45.0%
!! ACTCTGAAACTGCAGTTCAC+CGG - chr8.1:1446602-1446621 None:intergenic 45.0%
!! GGCATTGGCATTCTTCAACT+GGG + chr8.1:1447252-1447271 MS.gene012678:CDS 45.0%
!! TCTAGCTCATCGGTCTTGTT+GGG - chr8.1:1447997-1448016 None:intergenic 45.0%
!! TGAGTGTACTTTGGCTCTTC+AGG + chr8.1:1446025-1446044 MS.gene012678:CDS 45.0%
!!! GGGCTGTTTTTCACAGCAAT+AGG + chr8.1:1445952-1445971 MS.gene012678:CDS 45.0%
AACGACAGAAGACTCGCCTT+CGG - chr8.1:1447704-1447723 None:intergenic 50.0%
ACAGAGGGCAAAGGAGCTAA+AGG + chr8.1:1447618-1447637 MS.gene012678:CDS 50.0%
AGAGATTGAGGGCTGCGTTT+GGG + chr8.1:1446186-1446205 MS.gene012678:CDS 50.0%
AGCAAAGCCCGGACAAATTG+CGG - chr8.1:1446056-1446075 None:intergenic 50.0%
AGGTTCAGCCGCAATTTGTC+CGG + chr8.1:1446045-1446064 MS.gene012678:CDS 50.0%
AGTGACAAGTGAGGAAGCTC+AGG + chr8.1:1447189-1447208 MS.gene012678:CDS 50.0%
AGTGGCTTATGACTGGGTCA+AGG + chr8.1:1447357-1447376 MS.gene012678:CDS 50.0%
ATGTTCACATGTGCGCTGCT+AGG + chr8.1:1447278-1447297 MS.gene012678:CDS 50.0%
CACGGACCTAATCCAGCAAT+AGG - chr8.1:1446290-1446309 None:intergenic 50.0%
CACTGAAGTTCCTGATACCG+AGG + chr8.1:1446964-1446983 MS.gene012678:CDS 50.0%
CCGACAGATTCCTATCCTTC+TGG - chr8.1:1446514-1446533 None:intergenic 50.0%
CCTGTCAACATGGGATCCAA+CGG + chr8.1:1447522-1447541 MS.gene012678:CDS 50.0%
CGCCCAAAACACATCCTGAT+AGG + chr8.1:1445931-1445950 MS.gene012678:CDS 50.0%
GAAGGATAGGAATCTGTCGG+AGG + chr8.1:1446514-1446533 MS.gene012678:CDS 50.0%
GCCACCTTTGTTGGAAGAAG+AGG + chr8.1:1446841-1446860 MS.gene012678:CDS 50.0%
GGAGAAGTTGGAGGAACAGA+GGG + chr8.1:1447603-1447622 MS.gene012678:CDS 50.0%
GGTGCTCCTATTGCTGGATT+AGG + chr8.1:1446281-1446300 MS.gene012678:CDS 50.0%
GGTGGTAGAAGAAAGAAGGG+TGG + chr8.1:1445735-1445754 MS.gene012678:CDS 50.0%
GTGACCAAGGGAGATGAAAG+TGG + chr8.1:1446887-1446906 MS.gene012678:CDS 50.0%
TAAGCTTGCAGGAGCTTCTG+AGG + chr8.1:1447891-1447910 MS.gene012678:CDS 50.0%
TCATTATCTCCCGTTGCTCC+AGG - chr8.1:1447031-1447050 None:intergenic 50.0%
TCTTCTGTCGTTGGAGGTCA+GGG + chr8.1:1447712-1447731 MS.gene012678:CDS 50.0%
TGCTTCAAAGTTCCAGGAGG+TGG + chr8.1:1447228-1447247 MS.gene012678:CDS 50.0%
TGGGATGGAGCTATGTTCAG+AGG + chr8.1:1447153-1447172 MS.gene012678:CDS 50.0%
TGTAGAAGTTAGTCCGGAGC+AGG + chr8.1:1446817-1446836 MS.gene012678:CDS 50.0%
TGTCGGAGGTTTCTATTCGG+TGG + chr8.1:1446528-1446547 MS.gene012678:CDS 50.0%
TTCAAAGTTCCAGGAGGTGG+CGG + chr8.1:1447231-1447250 MS.gene012678:CDS 50.0%
! CAGCTTTTCCGCTCACATGT+TGG + chr8.1:1447094-1447113 MS.gene012678:CDS 50.0%
! CTCTAGCTCATCGGTCTTGT+TGG - chr8.1:1447998-1448017 None:intergenic 50.0%
! TGACTTGCATGAGCTTGGGA+TGG + chr8.1:1447138-1447157 MS.gene012678:CDS 50.0%
!! AAACAGGGAAGTGCTACCGA+AGG + chr8.1:1447685-1447704 MS.gene012678:CDS 50.0%
!! ATCCAGCAATAGGAGCACCA+CGG - chr8.1:1446280-1446299 None:intergenic 50.0%
!! CAACCCCACCATTTGGTGTT+TGG - chr8.1:1445791-1445810 None:intergenic 50.0%
!! CGGCATTGGCATTCTTCAAC+TGG + chr8.1:1447251-1447270 MS.gene012678:CDS 50.0%
!! TATGAGGGACTGTTGGCTCT+GGG + chr8.1:1447439-1447458 MS.gene012678:CDS 50.0%
!! TCATCGGTCTTGTTGGGAAG+TGG - chr8.1:1447991-1448010 None:intergenic 50.0%
AACAAAGGTGGCTCCTGCTC+CGG - chr8.1:1446833-1446852 None:intergenic 55.0%
AAGGGGGCAAATTCTGCCGT+TGG + chr8.1:1446335-1446354 MS.gene012678:CDS 55.0%
AGAAGCTGCTGAGCAAGCAG+TGG + chr8.1:1447750-1447769 MS.gene012678:CDS 55.0%
AGCGTTCTGTTGCAGCATCC+AGG - chr8.1:1447870-1447889 None:intergenic 55.0%
AGGGGGCAAATTCTGCCGTT+GGG + chr8.1:1446336-1446355 MS.gene012678:CDS 55.0%
CACAGCAGGATCTCCACAGT+CGG + chr8.1:1446222-1446241 MS.gene012678:CDS 55.0%
CAGAGATTGAGGGCTGCGTT+TGG + chr8.1:1446185-1446204 MS.gene012678:CDS 55.0%
CCGTTGGATCCCATGTTGAC+AGG - chr8.1:1447525-1447544 None:intergenic 55.0%
GAAGGCGAGTCTTCTGTCGT+TGG + chr8.1:1447703-1447722 MS.gene012678:CDS 55.0%
GGCTGCTTCAAAGTTCCAGG+AGG + chr8.1:1447225-1447244 MS.gene012678:CDS 55.0%
GGGAGAAGTTGGAGGAACAG+AGG + chr8.1:1447602-1447621 MS.gene012678:CDS 55.0%
GGTTCAGCCGCAATTTGTCC+GGG + chr8.1:1446046-1446065 MS.gene012678:CDS 55.0%
GTCTTCTGTCGTTGGAGGTC+AGG + chr8.1:1447711-1447730 MS.gene012678:CDS 55.0%
GTTGGAGGAACAGAGGGCAA+AGG + chr8.1:1447609-1447628 MS.gene012678:CDS 55.0%
TAGGTCCGTGTTTGCCAGCA+CGG + chr8.1:1446300-1446319 MS.gene012678:CDS 55.0%
TGTCCGGGCTTTGCTTCGTA+GGG + chr8.1:1446061-1446080 MS.gene012678:CDS 55.0%
TTAGGTGCTTCTGCTGTCCG+TGG + chr8.1:1446260-1446279 MS.gene012678:CDS 55.0%
TTCAGGGACAGAGTCACCGA+GGG - chr8.1:1446924-1446943 None:intergenic 55.0%
TTGTCCGGGCTTTGCTTCGT+AGG + chr8.1:1446060-1446079 MS.gene012678:CDS 55.0%
! CATCAGGCTTGCTCAGATGC+CGG + chr8.1:1446580-1446599 MS.gene012678:CDS 55.0%
!! CTATGAGGGACTGTTGGCTC+TGG + chr8.1:1447438-1447457 MS.gene012678:CDS 55.0%
!! GGCATCTGGGTCTTGTTCTC+TGG - chr8.1:1446428-1446447 None:intergenic 55.0%
CTTCAGGGACAGAGTCACCG+AGG - chr8.1:1446925-1446944 None:intergenic 60.0%
GAGCCCTACGAAGCAAAGCC+CGG - chr8.1:1446067-1446086 None:intergenic 60.0%
GGAGCAGGAGCCACCTTTGT+TGG + chr8.1:1446832-1446851 MS.gene012678:CDS 60.0%
GGCGAGTCTTCTGTCGTTGG+AGG + chr8.1:1447706-1447725 MS.gene012678:CDS 60.0%
GGCTTTGCTTCGTAGGGCTC+GGG + chr8.1:1446067-1446086 MS.gene012678:CDS 60.0%
GGGCTTTGCTTCGTAGGGCT+CGG + chr8.1:1446066-1446085 MS.gene012678:CDS 60.0%
GTCCGTGGTGCTCCTATTGC+TGG + chr8.1:1446275-1446294 MS.gene012678:CDS 60.0%
TCCTGCTGTGCTTCCTGACG+AGG - chr8.1:1446212-1446231 None:intergenic 60.0%
TTTGCCCCCTTCTTCGACGC+AGG - chr8.1:1446326-1446345 None:intergenic 60.0%
!! GCAGAAGCACCTAACGCAGC+AGG - chr8.1:1446254-1446273 None:intergenic 60.0%
ACGGCCTGCGTCGAAGAAGG+GGG + chr8.1:1446319-1446338 MS.gene012678:CDS 65.0%
AGCACGGCCTGCGTCGAAGA+AGG + chr8.1:1446316-1446335 MS.gene012678:CDS 65.0%
ATGCCAATGCCGCCACCTCC+TGG - chr8.1:1447243-1447262 None:intergenic 65.0%
CACGGCCTGCGTCGAAGAAG+GGG + chr8.1:1446318-1446337 MS.gene012678:CDS 65.0%
GCACCTAACGCAGCAGGCGA+AGG - chr8.1:1446248-1446267 None:intergenic 65.0%
GCACGGCCTGCGTCGAAGAA+GGG + chr8.1:1446317-1446336 MS.gene012678:CDS 65.0%
TCGTAGGGCTCGGGCGTTTG+AGG + chr8.1:1446076-1446095 MS.gene012678:CDS 65.0%
TTCTTCGACGCAGGCCGTGC+TGG - chr8.1:1446317-1446336 None:intergenic 65.0%
! GCAGGCCGTGCTGGCAAACA+CGG - chr8.1:1446308-1446327 None:intergenic 65.0%
! GCCTCGTCAGGAAGCACAGC+AGG + chr8.1:1446208-1446227 MS.gene012678:CDS 65.0%
! GCTCGGGCGTTTGAGGCTGT+TGG + chr8.1:1446083-1446102 MS.gene012678:CDS 65.0%
! GTTCCAGGAGGTGGCGGCAT+TGG + chr8.1:1447237-1447256 MS.gene012678:CDS 65.0%
CAGCAGGCGAAGGCCGACTG+TGG - chr8.1:1446238-1446257 None:intergenic 70.0%
CGGCCTTCGCCTGCTGCGTT+AGG + chr8.1:1446242-1446261 MS.gene012678:CDS 70.0%
GGCTGCGTTTGGGCCTCGTC+AGG + chr8.1:1446196-1446215 MS.gene012678:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 1445723 1448044 1445723 ID=MS.gene012678
chr8.1 mRNA 1445723 1448044 1445723 ID=MS.gene012678.t1;Parent=MS.gene012678
chr8.1 exon 1445723 1448044 1445723 ID=MS.gene012678.t1.exon1;Parent=MS.gene012678.t1
chr8.1 CDS 1445723 1448044 1445723 ID=cds.MS.gene012678.t1;Parent=MS.gene012678.t1
Gene Sequence

>MS.gene012678

ATGGGGAAATCAGGTGGTAGAAGAAAGAAGGGTGGTGCTGTTGTTGACAATTCTTCAGCTTCTGTCCAAACACCAAATGGTGGGGTTGAATTGGATTCATCTATTTTCTTGAAGAAGGCACATGAAATGAAAGAAGAAGGGAATAGAAGGTTTCAGAGTAAGGATTATACTGGTGCTCTTGAAAACTATGAGAATGCTCTGAAACTCACGCCCAAAACACATCCTGATAGGGCTGTTTTTCACAGCAATAGGGCTGCTTGTATGATGCAAATGAAACCTATTGATTATGAATCTGTGATTTCTGAGTGTACTTTGGCTCTTCAGGTTCAGCCGCAATTTGTCCGGGCTTTGCTTCGTAGGGCTCGGGCGTTTGAGGCTGTTGGTAAGTATGAATTGGCTGTTCAAGATGTGCAGTTGTTATTGGCTTCTGATCCCAATCATAAGGATGCTTTGGATATTGCTCAGAGATTGAGGGCTGCGTTTGGGCCTCGTCAGGAAGCACAGCAGGATCTCCACAGTCGGCCTTCGCCTGCTGCGTTAGGTGCTTCTGCTGTCCGTGGTGCTCCTATTGCTGGATTAGGTCCGTGTTTGCCAGCACGGCCTGCGTCGAAGAAGGGGGCAAATTCTGCCGTTGGGTCAGTTGTTTCTCCTAATAACAAGGTTGACAGGTCTCAAAATGTTTTGCTGCCAACTGAAAATGGTCCAGAGAACAAGACCCAGATGCCTAAAGTTGTCCTGAAGCCTTTTAATAATGGTCCTGCTGTGCAATCTAACTCGAAAAATGAGAGCCAGAAGGATAGGAATCTGTCGGAGGTTTCTATTCGGTGGAGACCATTGAAGCTTGTTTATGATCATGACATCAGGCTTGCTCAGATGCCGGTGAACTGCAGTTTCAGAGTACTTAGAGATGTGGTAAGCAAAAGATTTCCTTCGTCAAATTCAGTTCTGATCAAGTACAAGGATTGTGATGGTGATTTGGTTACTATAACATCTACTGATGAACTCAGATTGGCAGAGTCGTTTGTCGATAGCAATCTGCTGAAAGAACTTGAATCAGATAAAAGTGATTCTATTTCGGTGCTGAGACTACATATTGTAGAAGTTAGTCCGGAGCAGGAGCCACCTTTGTTGGAAGAAGAGGAAGAAAAACTCGTTGAGAATGAAGTGACCAAGGGAGATGAAAGTGGATCTCATTCTTCCCTCGGTGACTCTGTCCCTGAAGTTACTGAAGTTACAGAAGTCACTGAAGTTCCTGATACCGAGGTTGATAAGATAATAACAAAGAAGGATGTTTCAAAAGAAAAGCCTGGAGCAACGGGAGATAATGAATGCAAAGAAGTGGAGATGGATGATTGGCTCTTTGAATTTGCTCAGCTTTTCCGCTCACATGTTGGTATTGACCCTGATGCTCATATTGACTTGCATGAGCTTGGGATGGAGCTATGTTCAGAGGCACTTGAAGAAACAGTGACAAGTGAGGAAGCTCAGGATCTATTTGATAAGGCTGCTTCAAAGTTCCAGGAGGTGGCGGCATTGGCATTCTTCAACTGGGGTAATGTTCACATGTGCGCTGCTAGGAAGCGAATTCCCTTAGATGAGTCTGCTGGTAAAGATGTAGTGGCAGAACAACTTCAAGTGGCTTATGACTGGGTCAAGGAAAAGTATTCTTTGGCACGAGAGAAGTATGAGGAAGCACTCTTGATCAAACCTGATTTCTATGAGGGACTGTTGGCTCTGGGCCAACAACAATTTGAAATGGCCAAACTCCATTGGTCTTTTGCAATTGCTAAGAAGATAGACCTGTCAACATGGGATCCAACGGAAACTCTTCAACTGTTTAACAGTGCAGAGGAGAAGATGAAATCTGCTACTGATATGTGGGAGAAGTTGGAGGAACAGAGGGCAAAGGAGCTAAAGGACCCAACTGCAACAAAGAAAGAAGAATTGTTGAGAAGAAGAAAGAAACAGGGAAGTGCTACCGAAGGCGAGTCTTCTGTCGTTGGAGGTCAGGGTGAGATATCTGCTGAAGAAGCTGCTGAGCAAGCAGTGGTCATGAGATCACAAATTCATCTTTTTTGGGGCAACATGCTTTTCGAAAAATCCCAAGTGGAATGCAAATTAGGAATGGATGGTTGGAAGAAAAACCTGGATGCTGCAACAGAACGCTTTAAGCTTGCAGGAGCTTCTGAGGCAGATATTTTGATGGTTCTAAAGAATCACAGCTCAAACGGTGATACAAAAGGTGATGATAAAAAGGTCCAAAGTCCACTTCCCAACAAGACCGATGAGCTAGAGATCAACAAGGAGGCCAATCAAGGATGA
Protein sequence

>MS.gene012678.t1

MGKSGGRRKKGGAVVDNSSASVQTPNGGVELDSSIFLKKAHEMKEEGNRRFQSKDYTGALENYENALKLTPKTHPDRAVFHSNRAACMMQMKPIDYESVISECTLALQVQPQFVRALLRRARAFEAVGKYELAVQDVQLLLASDPNHKDALDIAQRLRAAFGPRQEAQQDLHSRPSPAALGASAVRGAPIAGLGPCLPARPASKKGANSAVGSVVSPNNKVDRSQNVLLPTENGPENKTQMPKVVLKPFNNGPAVQSNSKNESQKDRNLSEVSIRWRPLKLVYDHDIRLAQMPVNCSFRVLRDVVSKRFPSSNSVLIKYKDCDGDLVTITSTDELRLAESFVDSNLLKELESDKSDSISVLRLHIVEVSPEQEPPLLEEEEEKLVENEVTKGDESGSHSSLGDSVPEVTEVTEVTEVPDTEVDKIITKKDVSKEKPGATGDNECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMELCSEALEETVTSEEAQDLFDKAASKFQEVAALAFFNWGNVHMCAARKRIPLDESAGKDVVAEQLQVAYDWVKEKYSLAREKYEEALLIKPDFYEGLLALGQQQFEMAKLHWSFAIAKKIDLSTWDPTETLQLFNSAEEKMKSATDMWEKLEEQRAKELKDPTATKKEELLRRRKKQGSATEGESSVVGGQGEISAEEAAEQAVVMRSQIHLFWGNMLFEKSQVECKLGMDGWKKNLDAATERFKLAGASEADILMVLKNHSSNGDTKGDDKKVQSPLPNKTDELEINKEANQG