Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042139.t1 | XP_003610489.2 | 93.5 | 772 | 46 | 2 | 1 | 772 | 1 | 768 | 0.00E+00 | 1329.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042139.t1 | O48802 | 63.6 | 777 | 236 | 9 | 1 | 756 | 1 | 751 | 1.3e-249 | 864.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042139.t1 | G7JKF9 | 93.5 | 772 | 46 | 2 | 1 | 772 | 1 | 768 | 0.0e+00 | 1329.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene33177 | MS.gene042139 | PPI |
| MS.gene042139 | MS.gene33180 | PPI |
| MS.gene042139 | MS.gene016007 | PPI |
| MS.gene042139 | MS.gene60302 | PPI |
| MS.gene060932 | MS.gene042139 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042139.t1 | MTR_4g132780 | 98.187 | 772 | 10 | 2 | 1 | 772 | 1 | 768 | 0.0 | 1550 |
| MS.gene042139.t1 | MTR_2g025130 | 50.806 | 496 | 147 | 9 | 261 | 756 | 51 | 449 | 7.91e-148 | 441 |
| MS.gene042139.t1 | MTR_1g012840 | 41.791 | 469 | 199 | 6 | 277 | 743 | 262 | 658 | 1.44e-111 | 355 |
| MS.gene042139.t1 | MTR_1g012840 | 41.509 | 159 | 92 | 1 | 1 | 158 | 1 | 159 | 2.35e-31 | 131 |
| MS.gene042139.t1 | MTR_2g451540 | 42.094 | 468 | 187 | 7 | 280 | 743 | 284 | 671 | 4.22e-110 | 352 |
| MS.gene042139.t1 | MTR_2g451540 | 42.953 | 149 | 84 | 1 | 16 | 164 | 17 | 164 | 3.54e-31 | 130 |
| MS.gene042139.t1 | MTR_7g059150 | 38.710 | 124 | 71 | 2 | 37 | 157 | 92 | 213 | 1.97e-19 | 89.4 |
| MS.gene042139.t1 | MTR_2g090135 | 37.097 | 124 | 73 | 2 | 37 | 157 | 95 | 216 | 6.19e-18 | 85.1 |
| MS.gene042139.t1 | MTR_2g090135 | 38.614 | 101 | 57 | 2 | 37 | 134 | 95 | 193 | 5.60e-15 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042139.t1 | AT1G62390 | 65.854 | 779 | 215 | 10 | 1 | 756 | 1 | 751 | 0.0 | 929 |
| MS.gene042139.t1 | AT2G25290 | 37.778 | 720 | 363 | 13 | 32 | 743 | 44 | 686 | 4.52e-150 | 456 |
| MS.gene042139.t1 | AT2G25290 | 37.778 | 720 | 363 | 13 | 32 | 743 | 44 | 686 | 4.52e-150 | 456 |
| MS.gene042139.t1 | AT2G25290 | 37.778 | 720 | 363 | 13 | 32 | 743 | 44 | 686 | 4.52e-150 | 456 |
| MS.gene042139.t1 | AT2G25290 | 37.778 | 720 | 363 | 13 | 32 | 743 | 44 | 686 | 4.52e-150 | 456 |
| MS.gene042139.t1 | AT5G20360 | 34.663 | 727 | 369 | 15 | 37 | 749 | 33 | 667 | 1.28e-116 | 369 |
| MS.gene042139.t1 | AT5G20360 | 34.663 | 727 | 369 | 15 | 37 | 749 | 33 | 667 | 1.28e-116 | 369 |
| MS.gene042139.t1 | AT5G20360 | 34.263 | 753 | 383 | 17 | 15 | 749 | 39 | 697 | 1.78e-116 | 369 |
| MS.gene042139.t1 | AT5G20360 | 34.263 | 753 | 383 | 17 | 15 | 749 | 39 | 697 | 1.78e-116 | 369 |
| MS.gene042139.t1 | AT5G20360 | 34.663 | 727 | 369 | 15 | 37 | 749 | 113 | 747 | 6.76e-116 | 369 |
| MS.gene042139.t1 | AT5G20360 | 34.663 | 727 | 369 | 15 | 37 | 749 | 123 | 757 | 1.17e-115 | 369 |
| MS.gene042139.t1 | AT5G20360 | 34.663 | 727 | 369 | 15 | 37 | 749 | 123 | 757 | 1.17e-115 | 369 |
| MS.gene042139.t1 | AT4G32070 | 40.685 | 467 | 216 | 5 | 277 | 743 | 318 | 723 | 4.81e-109 | 350 |
| MS.gene042139.t1 | AT4G32070 | 41.732 | 127 | 74 | 0 | 32 | 158 | 43 | 169 | 1.33e-26 | 116 |
| MS.gene042139.t1 | AT4G32070 | 40.685 | 467 | 216 | 5 | 277 | 743 | 318 | 723 | 4.81e-109 | 350 |
| MS.gene042139.t1 | AT4G32070 | 41.732 | 127 | 74 | 0 | 32 | 158 | 43 | 169 | 1.33e-26 | 116 |
| MS.gene042139.t1 | AT4G30480 | 34.586 | 133 | 82 | 2 | 37 | 166 | 102 | 232 | 1.26e-14 | 75.5 |
| MS.gene042139.t1 | AT3G58620 | 31.538 | 130 | 83 | 2 | 37 | 166 | 446 | 569 | 1.31e-11 | 68.6 |
| MS.gene042139.t1 | AT3G58620 | 31.538 | 130 | 83 | 2 | 37 | 166 | 446 | 569 | 1.34e-11 | 68.6 |
Find 204 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGTGTACTTTGGCTCTTC+AGG | 0.248512 | 8.3:-1176654 | MS.gene042139:CDS |
| CGGCATTGGCATTCTTCAAC+TGG | 0.265168 | 8.3:-1175428 | MS.gene042139:CDS |
| GTTGAGAAGAAGAAAGAAAC+AGG | 0.268964 | 8.3:-1175010 | MS.gene042139:CDS |
| GGCATCTGGGTCTTGTTCTC+TGG | 0.269630 | 8.3:+1176254 | None:intergenic |
| CAACCCCACCATTTGGTGTT+TGG | 0.286040 | 8.3:+1176891 | None:intergenic |
| TCAAGATGTGCAGTTGTTAT+TGG | 0.289033 | 8.3:-1176555 | MS.gene042139:CDS |
| TCCCAAGTGGAATGCAAATT+AGG | 0.293568 | 8.3:-1174856 | MS.gene042139:CDS |
| ACAGCAGGACCATTATTAAA+AGG | 0.297119 | 8.3:+1176215 | None:intergenic |
| TCTTCTTTCTTTGTTGCAGT+TGG | 0.304943 | 8.3:+1175036 | None:intergenic |
| GACCTGTCAACCTTGTTATT+AGG | 0.310700 | 8.3:+1176308 | None:intergenic |
| ACCAAATGGTGGGGTTGAAT+TGG | 0.315838 | 8.3:-1176885 | MS.gene042139:CDS |
| AAAGGCTTCAGGACAACTTT+AGG | 0.315931 | 8.3:+1176233 | None:intergenic |
| ATCTTATCAACCTCGGTATC+AGG | 0.324081 | 8.3:+1175705 | None:intergenic |
| CTCTAGCTCATCGGTCTTGT+TGG | 0.326163 | 8.3:+1174684 | None:intergenic |
| AGCCCTATCAGGATGTGTTT+TGG | 0.326734 | 8.3:+1176745 | None:intergenic |
| GTCTTCTGTCGTTGGAGGTC+AGG | 0.334086 | 8.3:-1174968 | MS.gene042139:CDS |
| GTCCGTGGTGCTCCTATTGC+TGG | 0.334780 | 8.3:-1176404 | MS.gene042139:CDS |
| TTTACCAGCAGACTCATCTA+AGG | 0.335593 | 8.3:+1175368 | None:intergenic |
| TGCAAAAGACCAATGGAGTT+TGG | 0.335622 | 8.3:+1175197 | None:intergenic |
| TCAGGACAACTTTAGGCATC+TGG | 0.335801 | 8.3:+1176240 | None:intergenic |
| ACAGAACGCTTTAAGCTTGC+AGG | 0.338073 | 8.3:-1174799 | MS.gene042139:CDS |
| CTATGAGGGACTGTTGGCTC+TGG | 0.341431 | 8.3:-1175241 | MS.gene042139:CDS |
| TTCTTCGACGCAGGCCGTGC+TGG | 0.341743 | 8.3:+1176365 | None:intergenic |
| GACCATTATTAAAAGGCTTC+AGG | 0.343074 | 8.3:+1176222 | None:intergenic |
| CAGAGATTGAGGGCTGCGTT+TGG | 0.343757 | 8.3:-1176494 | MS.gene042139:CDS |
| CTTCTTTCTTTGTTGCAGTT+GGG | 0.350219 | 8.3:+1175037 | None:intergenic |
| CGGCCTTCGCCTGCTGCGTT+AGG | 0.354738 | 8.3:-1176437 | MS.gene042139:CDS |
| TAAGGCTGCTTCAAAGTTCC+AGG | 0.355515 | 8.3:-1175457 | MS.gene042139:CDS |
| GGTCAAGGAAAAGTATTCTT+TGG | 0.356554 | 8.3:-1175307 | MS.gene042139:CDS |
| TCATTTATCTCATCCTTGAT+TGG | 0.361253 | 8.3:+1174648 | None:intergenic |
| AGATAAAAGTGATTCTATTT+CGG | 0.361509 | 8.3:-1175901 | MS.gene042139:CDS |
| AAGAAAATTATGGGGAAATC+AGG | 0.361902 | 8.3:-1176965 | None:intergenic |
| GAATAGAAGGTTTCAGAGTA+AGG | 0.367198 | 8.3:-1176816 | MS.gene042139:CDS |
| CGCCCAAAACACATCCTGAT+AGG | 0.369541 | 8.3:-1176748 | MS.gene042139:CDS |
| GGGCTTTGCTTCGTAGGGCT+CGG | 0.370895 | 8.3:-1176613 | MS.gene042139:CDS |
| CCGACAGATTCCTATCCTTC+TGG | 0.372691 | 8.3:+1176168 | None:intergenic |
| AGGTTCAGCCGCAATTTGTC+CGG | 0.377457 | 8.3:-1176634 | MS.gene042139:CDS |
| AAAGAAAAGCCTGGAGCAAC+AGG | 0.377868 | 8.3:-1175660 | MS.gene042139:CDS |
| AGAGATTGAGGGCTGCGTTT+GGG | 0.381653 | 8.3:-1176493 | MS.gene042139:CDS |
| CAAGGATTGTGATGGTGATT+TGG | 0.383636 | 8.3:-1176000 | MS.gene042139:CDS |
| TCATTATCTCCTGTTGCTCC+AGG | 0.388741 | 8.3:+1175651 | None:intergenic |
| TGAAAGAAGAAGGGAATAGA+AGG | 0.392126 | 8.3:-1176829 | MS.gene042139:CDS |
| TGCAAGTCAATATGAGCATC+AGG | 0.394649 | 8.3:+1175555 | None:intergenic |
| ATCCAAAGCATCCTTATGAT+TGG | 0.395798 | 8.3:+1176523 | None:intergenic |
| GGTGCTCCTATTGCTGGATT+AGG | 0.399698 | 8.3:-1176398 | MS.gene042139:CDS |
| TTGTCCGGGCTTTGCTTCGT+AGG | 0.400759 | 8.3:-1176619 | MS.gene042139:CDS |
| TCCCAATCATAAGGATGCTT+TGG | 0.400869 | 8.3:-1176525 | MS.gene042139:CDS |
| TCCAATTCAACCCCACCATT+TGG | 0.402916 | 8.3:+1176884 | None:intergenic |
| TCTGTAACTTCAGTAACTTC+AGG | 0.406104 | 8.3:+1175741 | None:intergenic |
| ATGCCAATGCCGCCACCTCC+TGG | 0.407999 | 8.3:+1175439 | None:intergenic |
| ATCACAGATTCATAATCAAT+AGG | 0.414155 | 8.3:+1176680 | None:intergenic |
| GGAGCAGGAGCCACCTTTGT+TGG | 0.416587 | 8.3:-1175847 | MS.gene042139:CDS |
| CATATTGACTTGCATGAGCT+TGG | 0.418574 | 8.3:-1175546 | MS.gene042139:CDS |
| TACAAAAGGTGATGATAAAA+AGG | 0.419380 | 8.3:-1174722 | MS.gene042139:CDS |
| TCGTAGGGCTCGGGCGTTTG+AGG | 0.421207 | 8.3:-1176603 | MS.gene042139:CDS |
| TGGATATTGCTCAGAGATTG+AGG | 0.427013 | 8.3:-1176505 | MS.gene042139:CDS |
| TTTCAGAGTAAGGATTATAC+TGG | 0.429564 | 8.3:-1176806 | MS.gene042139:CDS |
| TGGCCATTTCAAATTGTTGT+TGG | 0.430447 | 8.3:+1175217 | None:intergenic |
| GTTCCAGGAGGTGGCGGCAT+TGG | 0.433016 | 8.3:-1175442 | MS.gene042139:CDS |
| GGCTTTGCTTCGTAGGGCTC+GGG | 0.434118 | 8.3:-1176612 | MS.gene042139:CDS |
| GGCTGCGTTTGGGCCTCGTC+AGG | 0.435769 | 8.3:-1176483 | MS.gene042139:CDS |
| GATCAAACCTGATTTCTATG+AGG | 0.436110 | 8.3:-1175256 | MS.gene042139:CDS |
| AGCACGGCCTGCGTCGAAGA+AGG | 0.437490 | 8.3:-1176363 | MS.gene042139:CDS |
| CCGTTGGATCCCATGTTGAC+AGG | 0.437619 | 8.3:+1175157 | None:intergenic |
| AACAAAGGTGGCTCCTGCTC+CGG | 0.440439 | 8.3:+1175849 | None:intergenic |
| TTGTTTATGATCATGACATC+AGG | 0.448132 | 8.3:-1176115 | MS.gene042139:CDS |
| AACAGTCCCTCATAGAAATC+AGG | 0.448919 | 8.3:+1175249 | None:intergenic |
| TCTAGCTCATCGGTCTTGTT+GGG | 0.448987 | 8.3:+1174685 | None:intergenic |
| TTCGAGTTAGATTGCACAGC+AGG | 0.450987 | 8.3:+1176200 | None:intergenic |
| GGATATTGCTCAGAGATTGA+GGG | 0.451571 | 8.3:-1176504 | MS.gene042139:CDS |
| AACTTCAAGTGGCTTATGAC+TGG | 0.453663 | 8.3:-1175329 | MS.gene042139:CDS |
| TCTTGTTGGGAAGTGGACTT+TGG | 0.460672 | 8.3:+1174698 | None:intergenic |
| GCACATGAAATGAAAGAAGA+AGG | 0.462119 | 8.3:-1176839 | MS.gene042139:CDS |
| TATGAGGGACTGTTGGCTCT+GGG | 0.463764 | 8.3:-1175240 | MS.gene042139:CDS |
| ATCTGTCGGAGGTTTCTATT+CGG | 0.466887 | 8.3:-1176154 | MS.gene042139:CDS |
| TCCAAAGCATCCTTATGATT+GGG | 0.467802 | 8.3:+1176524 | None:intergenic |
| TGATCATAAACAAGCTTCAA+TGG | 0.469664 | 8.3:+1176125 | None:intergenic |
| AGATCCACTTTCATCTCCCT+TGG | 0.469667 | 8.3:+1175788 | None:intergenic |
| GGCTTCTGATCCCAATCATA+AGG | 0.472316 | 8.3:-1176534 | MS.gene042139:CDS |
| ATATTGACTTGCATGAGCTT+GGG | 0.472334 | 8.3:-1175545 | MS.gene042139:CDS |
| GGGCCAACAACAATTTGAAA+TGG | 0.474260 | 8.3:-1175220 | MS.gene042139:CDS |
| CACGGACCTAATCCAGCAAT+AGG | 0.475945 | 8.3:+1176392 | None:intergenic |
| GCAGAAGCACCTAACGCAGC+AGG | 0.476486 | 8.3:+1176428 | None:intergenic |
| ATCAGGTGGTAGAAGAAAGA+AGG | 0.476870 | 8.3:-1176948 | MS.gene042139:CDS |
| GCCACCTTTGTTGGAAGAAG+AGG | 0.478587 | 8.3:-1175838 | MS.gene042139:CDS |
| TTCCTAATTTGCATTCCACT+TGG | 0.481107 | 8.3:+1174854 | None:intergenic |
| CTCCTAATAACAAGGTTGAC+AGG | 0.481320 | 8.3:-1176310 | MS.gene042139:CDS |
| TGCTTCAAAGTTCCAGGAGG+TGG | 0.481900 | 8.3:-1175451 | MS.gene042139:CDS |
| GAGCCCTACGAAGCAAAGCC+CGG | 0.482060 | 8.3:+1176615 | None:intergenic |
| TACTGATATGTGGGAGAAGT+TGG | 0.484531 | 8.3:-1175088 | MS.gene042139:CDS |
| TGTGATTTCTGAGTGTACTT+TGG | 0.485055 | 8.3:-1176663 | MS.gene042139:CDS |
| TAGGTCCGTGTTTGCCAGCA+CGG | 0.489653 | 8.3:-1176379 | MS.gene042139:CDS |
| AGCTCAGGATCTATTTGATA+AGG | 0.490348 | 8.3:-1175475 | MS.gene042139:CDS |
| GCCTCGTCAGGAAGCACAGC+AGG | 0.492073 | 8.3:-1176471 | MS.gene042139:CDS |
| CTGTAACTTCAGTAACTTCA+GGG | 0.492671 | 8.3:+1175742 | None:intergenic |
| GGTTCAGCCGCAATTTGTCC+GGG | 0.494328 | 8.3:-1176633 | MS.gene042139:CDS |
| TCTTCTGTCGTTGGAGGTCA+GGG | 0.496390 | 8.3:-1174967 | MS.gene042139:CDS |
| TCTTCCTCTTCTTCCAACAA+AGG | 0.496918 | 8.3:+1175834 | None:intergenic |
| AGCGTTCTGTTGCAGCATCC+AGG | 0.499132 | 8.3:+1174812 | None:intergenic |
| TGTCCGGGCTTTGCTTCGTA+GGG | 0.499344 | 8.3:-1176618 | MS.gene042139:CDS |
| GCACGGCCTGCGTCGAAGAA+GGG | 0.502293 | 8.3:-1176362 | MS.gene042139:CDS |
| GGCTGTTGGTAAGTATGAAT+TGG | 0.502917 | 8.3:-1176582 | MS.gene042139:CDS |
| GGCGAGTCTTCTGTCGTTGG+AGG | 0.503882 | 8.3:-1174973 | MS.gene042139:CDS |
| TTGAAATGGCCAAACTCCAT+TGG | 0.504188 | 8.3:-1175206 | MS.gene042139:CDS |
| TCCTCTTCTTCCAACAAAGG+TGG | 0.505242 | 8.3:+1175837 | None:intergenic |
| GGCATTGGCATTCTTCAACT+GGG | 0.505652 | 8.3:-1175427 | MS.gene042139:CDS |
| GCACCTAACGCAGCAGGCGA+AGG | 0.506022 | 8.3:+1176434 | None:intergenic |
| TTCAGTTCTGATCAAGTACA+AGG | 0.507255 | 8.3:-1176018 | MS.gene042139:CDS |
| TGTAGAAGTTAGTCCGGAGC+AGG | 0.507291 | 8.3:-1175862 | MS.gene042139:CDS |
| AACAGTTGAAGAGTTTCCGT+TGG | 0.508342 | 8.3:+1175141 | None:intergenic |
| GCTTCTGTCCAAACACCAAA+TGG | 0.508934 | 8.3:-1176899 | MS.gene042139:CDS |
| AGTGACAAGTGAGGAAGCTC+AGG | 0.509100 | 8.3:-1175490 | MS.gene042139:CDS |
| ATCAACAAGGAGGCCAATCA+AGG | 0.509255 | 8.3:-1174661 | MS.gene042139:CDS |
| ATCTACTGATGAACTCAGAT+TGG | 0.510115 | 8.3:-1175967 | MS.gene042139:CDS |
| TCATCGGTCTTGTTGGGAAG+TGG | 0.515199 | 8.3:+1174691 | None:intergenic |
| CAGGACAACTTTAGGCATCT+GGG | 0.517129 | 8.3:+1176241 | None:intergenic |
| TCCTAATTTGCATTCCACTT+GGG | 0.517971 | 8.3:+1174855 | None:intergenic |
| GCTCGGGCGTTTGAGGCTGT+TGG | 0.518791 | 8.3:-1176596 | MS.gene042139:CDS |
| GCAAATTAGGAATGGATGGT+TGG | 0.521832 | 8.3:-1174843 | MS.gene042139:CDS |
| CACGGCCTGCGTCGAAGAAG+GGG | 0.522245 | 8.3:-1176361 | MS.gene042139:CDS |
| AGCTCAAACGGTGATACAAA+AGG | 0.525012 | 8.3:-1174736 | MS.gene042139:CDS |
| AAAATGAGAGCCAGAAGGAT+AGG | 0.530714 | 8.3:-1176178 | MS.gene042139:CDS |
| ATCAAACCTGATTTCTATGA+GGG | 0.531376 | 8.3:-1175255 | MS.gene042139:CDS |
| GATGTTTCAAAAGAAAAGCC+TGG | 0.534064 | 8.3:-1175669 | MS.gene042139:CDS |
| AGCAAAGCCCGGACAAATTG+CGG | 0.535303 | 8.3:+1176626 | None:intergenic |
| ACAGAGGGCAAAGGAGCTAA+AGG | 0.535384 | 8.3:-1175061 | MS.gene042139:CDS |
| TGAAATCTGCTACTGATATG+TGG | 0.535440 | 8.3:-1175098 | MS.gene042139:CDS |
| AGTGGATCTCATTCTTCCCT+CGG | 0.536060 | 8.3:-1175774 | MS.gene042139:CDS |
| TCCTGCTGTGCTTCCTGACG+AGG | 0.536302 | 8.3:+1176470 | None:intergenic |
| CATCAGGCTTGCTCAGATGC+CGG | 0.537347 | 8.3:-1176099 | MS.gene042139:CDS |
| AACGACAGAAGACTCGCCTT+CGG | 0.538485 | 8.3:+1174978 | None:intergenic |
| ACATATTGTAGAAGTTAGTC+CGG | 0.538956 | 8.3:-1175868 | MS.gene042139:CDS |
| TGATAAGATAATAACAAAGA+AGG | 0.539178 | 8.3:-1175691 | MS.gene042139:CDS |
| TGATATGTGGGAGAAGTTGG+AGG | 0.542485 | 8.3:-1175085 | MS.gene042139:CDS |
| CTTGTTGATCTCTAGCTCAT+CGG | 0.544542 | 8.3:+1174675 | None:intergenic |
| CTAAAGAATCACAGCTCAAA+CGG | 0.544765 | 8.3:-1174748 | MS.gene042139:CDS |
| TGATTTCTATGAGGGACTGT+TGG | 0.545493 | 8.3:-1175247 | MS.gene042139:CDS |
| ATGTTCACATGTGCGCTGCT+AGG | 0.546089 | 8.3:-1175401 | MS.gene042139:CDS |
| AAGAAGTGGAGATGGATGAT+TGG | 0.546355 | 8.3:-1175623 | MS.gene042139:CDS |
| TTCAAAGTTCCAGGAGGTGG+CGG | 0.547550 | 8.3:-1175448 | MS.gene042139:CDS |
| TGTTATTATCTTATCAACCT+CGG | 0.548455 | 8.3:+1175698 | None:intergenic |
| TCAGGTGGTAGAAGAAAGAA+GGG | 0.549260 | 8.3:-1176947 | MS.gene042139:CDS |
| TAGCAATTGCAAAAGACCAA+TGG | 0.553654 | 8.3:+1175190 | None:intergenic |
| CACATGAAATGAAAGAAGAA+GGG | 0.561194 | 8.3:-1176838 | MS.gene042139:CDS |
| AGATAATGAATGCAAAGAAG+TGG | 0.563016 | 8.3:-1175637 | MS.gene042139:CDS |
| GCATTGGCATTCTTCAACTG+GGG | 0.567327 | 8.3:-1175426 | MS.gene042139:CDS |
| TGAATGCAAAGAAGTGGAGA+TGG | 0.567536 | 8.3:-1175631 | MS.gene042139:CDS |
| CAGCAGGCGAAGGCCGACTG+TGG | 0.567544 | 8.3:+1176444 | None:intergenic |
| GTGACCAAGGGAGATGAAAG+TGG | 0.568869 | 8.3:-1175792 | MS.gene042139:CDS |
| GAAGGCGAGTCTTCTGTCGT+TGG | 0.569947 | 8.3:-1174976 | MS.gene042139:CDS |
| GCAGGCCGTGCTGGCAAACA+CGG | 0.570124 | 8.3:+1176374 | None:intergenic |
| CTGTCCAAACACCAAATGGT+GGG | 0.572237 | 8.3:-1176895 | MS.gene042139:CDS |
| TAAGCTTGCAGGAGCTTCTG+AGG | 0.573931 | 8.3:-1174788 | MS.gene042139:CDS |
| AGAAGATAGACCTGTCAACA+TGG | 0.574294 | 8.3:-1175167 | MS.gene042139:CDS |
| TTGAGAAGAAGAAAGAAACA+GGG | 0.574394 | 8.3:-1175009 | MS.gene042139:CDS |
| AGTGGAATGCAAATTAGGAA+TGG | 0.579074 | 8.3:-1174851 | MS.gene042139:CDS |
| GAAATCTGCTACTGATATGT+GGG | 0.582332 | 8.3:-1175097 | MS.gene042139:CDS |
| TGTCGGAGGTTTCTATTCGG+TGG | 0.583849 | 8.3:-1176151 | MS.gene042139:CDS |
| GCCCAAAACACATCCTGATA+GGG | 0.587986 | 8.3:-1176747 | MS.gene042139:CDS |
| CACTGAAGTTCCTGATACCG+AGG | 0.590229 | 8.3:-1175715 | MS.gene042139:CDS |
| GGAGAAGTTGGAGGAACAGA+GGG | 0.591263 | 8.3:-1175076 | MS.gene042139:CDS |
| ACTCTGAAACTGCAGTTCAC+CGG | 0.593018 | 8.3:+1176080 | None:intergenic |
| TTTCAGAGTACTTAGAGATG+TGG | 0.594565 | 8.3:-1176066 | MS.gene042139:CDS |
| TTTGGCACGAGAGAAGTATG+AGG | 0.597958 | 8.3:-1175289 | MS.gene042139:CDS |
| GTTGGAGGAACAGAGGGCAA+AGG | 0.601122 | 8.3:-1175070 | MS.gene042139:CDS |
| ATCAGAACTGAATTTGACGA+AGG | 0.601722 | 8.3:+1176029 | None:intergenic |
| TGACTTGCATGAGCTTGGGA+TGG | 0.605109 | 8.3:-1175541 | MS.gene042139:CDS |
| AGTTGTTTCTCCTAATAACA+AGG | 0.606788 | 8.3:-1176318 | MS.gene042139:CDS |
| GAATGCAAATTAGGAATGGA+TGG | 0.608405 | 8.3:-1174847 | MS.gene042139:CDS |
| CACAGCAGGATCTCCACAGT+CGG | 0.611695 | 8.3:-1176457 | MS.gene042139:CDS |
| TTACCAGCAGACTCATCTAA+GGG | 0.611766 | 8.3:+1175369 | None:intergenic |
| CCAGAAGGATAGGAATCTGT+CGG | 0.613760 | 8.3:-1176168 | MS.gene042139:CDS |
| ATTCCCTTAGATGAGTCTGC+TGG | 0.619099 | 8.3:-1175372 | MS.gene042139:CDS |
| ACTTCAAGTGGCTTATGACT+GGG | 0.624534 | 8.3:-1175328 | MS.gene042139:CDS |
| TTAGGTGCTTCTGCTGTCCG+TGG | 0.626214 | 8.3:-1176419 | MS.gene042139:CDS |
| AGGAGAAACAACTGACCCAA+CGG | 0.628623 | 8.3:+1176328 | None:intergenic |
| AAAATTATGGGGAAATCAGG+TGG | 0.628733 | 8.3:-1176962 | None:intergenic |
| CGTTGAGAATGAAGTGACCA+AGG | 0.628866 | 8.3:-1175805 | MS.gene042139:CDS |
| TCTGTCCAAACACCAAATGG+TGG | 0.630928 | 8.3:-1176896 | MS.gene042139:CDS |
| TCAACTGTTTAACAGTGCAG+AGG | 0.632330 | 8.3:-1175127 | MS.gene042139:CDS |
| CCTGTCAACATGGGATCCAA+CGG | 0.635538 | 8.3:-1175157 | MS.gene042139:CDS |
| TGTCCAAACACCAAATGGTG+GGG | 0.637307 | 8.3:-1176894 | MS.gene042139:CDS |
| ACGGCCTGCGTCGAAGAAGG+GGG | 0.639868 | 8.3:-1176360 | MS.gene042139:CDS |
| AGAAGCTGCTGAGCAAGCAG+TGG | 0.642416 | 8.3:-1174929 | MS.gene042139:CDS |
| CGATGAGCTAGAGATCAACA+AGG | 0.643060 | 8.3:-1174674 | MS.gene042139:CDS |
| AGTGGCTTATGACTGGGTCA+AGG | 0.646353 | 8.3:-1175322 | MS.gene042139:CDS |
| GAAGATAGACCTGTCAACAT+GGG | 0.646417 | 8.3:-1175166 | MS.gene042139:CDS |
| TGGGATGGAGCTATGTTCAG+AGG | 0.646712 | 8.3:-1175526 | MS.gene042139:CDS |
| GTCTGCTGGTAAAGATGTAG+TGG | 0.654267 | 8.3:-1175358 | MS.gene042139:CDS |
| AGTGGCAGAACAACTTCAAG+TGG | 0.655945 | 8.3:-1175340 | MS.gene042139:CDS |
| GCAAGTCAATATGAGCATCA+GGG | 0.659898 | 8.3:+1175556 | None:intergenic |
| GGGAGAAGTTGGAGGAACAG+AGG | 0.662089 | 8.3:-1175077 | MS.gene042139:CDS |
| GTTGAGAATGAAGTGACCAA+GGG | 0.663815 | 8.3:-1175804 | MS.gene042139:CDS |
| TTCAGGGACAGAGTCACCGA+GGG | 0.668184 | 8.3:+1175758 | None:intergenic |
| TGAAGAAACAGTGACAAGTG+AGG | 0.673683 | 8.3:-1175499 | MS.gene042139:CDS |
| GGTCAATACCAACATGTGAG+CGG | 0.673952 | 8.3:+1175577 | None:intergenic |
| AAACAGGGAAGTGCTACCGA+AGG | 0.674314 | 8.3:-1174994 | MS.gene042139:CDS |
| ATCAAGTACAAGGATTGTGA+TGG | 0.683892 | 8.3:-1176008 | MS.gene042139:CDS |
| GAAGGATAGGAATCTGTCGG+AGG | 0.709195 | 8.3:-1176165 | MS.gene042139:CDS |
| CTTCAGGGACAGAGTCACCG+AGG | 0.713125 | 8.3:+1175757 | None:intergenic |
| GGCTGCTTCAAAGTTCCAGG+AGG | 0.723223 | 8.3:-1175454 | MS.gene042139:CDS |
| GGTGGTAGAAGAAAGAAGGG+TGG | 0.730439 | 8.3:-1176944 | MS.gene042139:CDS |
| ATCCAGCAATAGGAGCACCA+CGG | 0.747239 | 8.3:+1176402 | None:intergenic |
| TGAGCTAGAGATCAACAAGG+AGG | 0.759563 | 8.3:-1174671 | MS.gene042139:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATAAAAGTGATTCTATTT+CGG | - | chr8.3:1175712-1175731 | MS.gene042139:CDS | 20.0% |
| !! | TGATAAGATAATAACAAAGA+AGG | - | chr8.3:1175922-1175941 | MS.gene042139:CDS | 20.0% |
| !!! | ATCACAAATTCATCTTTTTT+GGG | - | chr8.3:1176714-1176733 | MS.gene042139:CDS | 20.0% |
| ! | ATCACAGATTCATAATCAAT+AGG | + | chr8.3:1174936-1174955 | None:intergenic | 25.0% |
| ! | TACAAAAGGTGATGATAAAA+AGG | - | chr8.3:1176891-1176910 | MS.gene042139:CDS | 25.0% |
| ! | TGTTATTATCTTATCAACCT+CGG | + | chr8.3:1175918-1175937 | None:intergenic | 25.0% |
| !! | TTCATCTATTTTCTTGAAGA+AGG | - | chr8.3:1174752-1174771 | MS.gene042139:CDS | 25.0% |
| !!! | GATCACAAATTCATCTTTTT+TGG | - | chr8.3:1176713-1176732 | MS.gene042139:CDS | 25.0% |
| !!! | TCACAAATTCATCTTTTTTG+GGG | - | chr8.3:1176715-1176734 | MS.gene042139:CDS | 25.0% |
| ACATATTGTAGAAGTTAGTC+CGG | - | chr8.3:1175745-1175764 | MS.gene042139:CDS | 30.0% | |
| AGATAATGAATGCAAAGAAG+TGG | - | chr8.3:1175976-1175995 | MS.gene042139:CDS | 30.0% | |
| ATCAAACCTGATTTCTATGA+GGG | - | chr8.3:1176358-1176377 | MS.gene042139:CDS | 30.0% | |
| CACATGAAATGAAAGAAGAA+GGG | - | chr8.3:1174775-1174794 | MS.gene042139:CDS | 30.0% | |
| TGATCATAAACAAGCTTCAA+TGG | + | chr8.3:1175491-1175510 | None:intergenic | 30.0% | |
| TTGAGAAGAAGAAAGAAACA+GGG | - | chr8.3:1176604-1176623 | MS.gene042139:CDS | 30.0% | |
| TTGTTTATGATCATGACATC+AGG | - | chr8.3:1175498-1175517 | MS.gene042139:CDS | 30.0% | |
| TTTCAGAGTAAGGATTATAC+TGG | - | chr8.3:1174807-1174826 | MS.gene042139:CDS | 30.0% | |
| !! | AGTTGTTTCTCCTAATAACA+AGG | - | chr8.3:1175295-1175314 | MS.gene042139:CDS | 30.0% |
| ACAGCAGGACCATTATTAAA+AGG | + | chr8.3:1175401-1175420 | None:intergenic | 35.0% | |
| AGCTCAGGATCTATTTGATA+AGG | - | chr8.3:1176138-1176157 | MS.gene042139:CDS | 35.0% | |
| AGTGGAATGCAAATTAGGAA+TGG | - | chr8.3:1176762-1176781 | MS.gene042139:CDS | 35.0% | |
| ATCAAGTACAAGGATTGTGA+TGG | - | chr8.3:1175605-1175624 | MS.gene042139:CDS | 35.0% | |
| ATCAGAACTGAATTTGACGA+AGG | + | chr8.3:1175587-1175606 | None:intergenic | 35.0% | |
| ATCTACTGATGAACTCAGAT+TGG | - | chr8.3:1175646-1175665 | MS.gene042139:CDS | 35.0% | |
| CTAAAGAATCACAGCTCAAA+CGG | - | chr8.3:1176865-1176884 | MS.gene042139:CDS | 35.0% | |
| CTGTAACTTCAGTAACTTCA+GGG | + | chr8.3:1175874-1175893 | None:intergenic | 35.0% | |
| CTTCTTTCTTTGTTGCAGTT+GGG | + | chr8.3:1176579-1176598 | None:intergenic | 35.0% | |
| GAAATCTGCTACTGATATGT+GGG | - | chr8.3:1176516-1176535 | MS.gene042139:CDS | 35.0% | |
| GAATAGAAGGTTTCAGAGTA+AGG | - | chr8.3:1174797-1174816 | MS.gene042139:CDS | 35.0% | |
| GAATGCAAATTAGGAATGGA+TGG | - | chr8.3:1176766-1176785 | MS.gene042139:CDS | 35.0% | |
| GACCATTATTAAAAGGCTTC+AGG | + | chr8.3:1175394-1175413 | None:intergenic | 35.0% | |
| GATCAAACCTGATTTCTATG+AGG | - | chr8.3:1176357-1176376 | MS.gene042139:CDS | 35.0% | |
| GATGTTTCAAAAGAAAAGCC+TGG | - | chr8.3:1175944-1175963 | MS.gene042139:CDS | 35.0% | |
| GCACATGAAATGAAAGAAGA+AGG | - | chr8.3:1174774-1174793 | MS.gene042139:CDS | 35.0% | |
| GTTGAGAAGAAGAAAGAAAC+AGG | - | chr8.3:1176603-1176622 | MS.gene042139:CDS | 35.0% | |
| TAGCAATTGCAAAAGACCAA+TGG | + | chr8.3:1176426-1176445 | None:intergenic | 35.0% | |
| TCAAGATGTGCAGTTGTTAT+TGG | - | chr8.3:1175058-1175077 | MS.gene042139:CDS | 35.0% | |
| TCTGTAACTTCAGTAACTTC+AGG | + | chr8.3:1175875-1175894 | None:intergenic | 35.0% | |
| TCTTCTTTCTTTGTTGCAGT+TGG | + | chr8.3:1176580-1176599 | None:intergenic | 35.0% | |
| TGAAAGAAGAAGGGAATAGA+AGG | - | chr8.3:1174784-1174803 | MS.gene042139:CDS | 35.0% | |
| TGAAATCTGCTACTGATATG+TGG | - | chr8.3:1176515-1176534 | MS.gene042139:CDS | 35.0% | |
| TGGCCATTTCAAATTGTTGT+TGG | + | chr8.3:1176399-1176418 | None:intergenic | 35.0% | |
| TGTGATTTCTGAGTGTACTT+TGG | - | chr8.3:1174950-1174969 | MS.gene042139:CDS | 35.0% | |
| ! | ATCCAAAGCATCCTTATGAT+TGG | + | chr8.3:1175093-1175112 | None:intergenic | 35.0% |
| ! | GTCCTGAAGCCTTTTAATAA+TGG | - | chr8.3:1175389-1175408 | MS.gene042139:CDS | 35.0% |
| ! | TCCAAAGCATCCTTATGATT+GGG | + | chr8.3:1175092-1175111 | None:intergenic | 35.0% |
| ! | TCCTAATTTGCATTCCACTT+GGG | + | chr8.3:1176761-1176780 | None:intergenic | 35.0% |
| ! | TTCAGTTCTGATCAAGTACA+AGG | - | chr8.3:1175595-1175614 | MS.gene042139:CDS | 35.0% |
| ! | TTCCTAATTTGCATTCCACT+TGG | + | chr8.3:1176762-1176781 | None:intergenic | 35.0% |
| ! | TTTCAGAGTACTTAGAGATG+TGG | - | chr8.3:1175547-1175566 | MS.gene042139:CDS | 35.0% |
| !! | ATATTGACTTGCATGAGCTT+GGG | - | chr8.3:1176068-1176087 | MS.gene042139:CDS | 35.0% |
| !! | GGTCAAGGAAAAGTATTCTT+TGG | - | chr8.3:1176306-1176325 | MS.gene042139:CDS | 35.0% |
| !!! | TTCTGAGGCAGATATTTTGA+TGG | - | chr8.3:1176840-1176859 | MS.gene042139:CDS | 35.0% |
| AAAATGAGAGCCAGAAGGAT+AGG | - | chr8.3:1175435-1175454 | MS.gene042139:CDS | 40.0% | |
| AAAGGCTTCAGGACAACTTT+AGG | + | chr8.3:1175383-1175402 | None:intergenic | 40.0% | |
| AACAGTCCCTCATAGAAATC+AGG | + | chr8.3:1176367-1176386 | None:intergenic | 40.0% | |
| AACAGTTGAAGAGTTTCCGT+TGG | + | chr8.3:1176475-1176494 | None:intergenic | 40.0% | |
| AACTTCAAGTGGCTTATGAC+TGG | - | chr8.3:1176284-1176303 | MS.gene042139:CDS | 40.0% | |
| AAGAAGTGGAGATGGATGAT+TGG | - | chr8.3:1175990-1176009 | MS.gene042139:CDS | 40.0% | |
| ACTTCAAGTGGCTTATGACT+GGG | - | chr8.3:1176285-1176304 | MS.gene042139:CDS | 40.0% | |
| AGAAGATAGACCTGTCAACA+TGG | - | chr8.3:1176446-1176465 | MS.gene042139:CDS | 40.0% | |
| AGCTCAAACGGTGATACAAA+AGG | - | chr8.3:1176877-1176896 | MS.gene042139:CDS | 40.0% | |
| ATCAGGTGGTAGAAGAAAGA+AGG | - | chr8.3:1174665-1174684 | MS.gene042139:CDS | 40.0% | |
| ATCTGTCGGAGGTTTCTATT+CGG | - | chr8.3:1175459-1175478 | MS.gene042139:CDS | 40.0% | |
| ATCTTATCAACCTCGGTATC+AGG | + | chr8.3:1175911-1175930 | None:intergenic | 40.0% | |
| CTCCTAATAACAAGGTTGAC+AGG | - | chr8.3:1175303-1175322 | MS.gene042139:CDS | 40.0% | |
| GAAGATAGACCTGTCAACAT+GGG | - | chr8.3:1176447-1176466 | MS.gene042139:CDS | 40.0% | |
| GCAAATTAGGAATGGATGGT+TGG | - | chr8.3:1176770-1176789 | MS.gene042139:CDS | 40.0% | |
| GCAAGTCAATATGAGCATCA+GGG | + | chr8.3:1176060-1176079 | None:intergenic | 40.0% | |
| GGATATTGCTCAGAGATTGA+GGG | - | chr8.3:1175109-1175128 | MS.gene042139:CDS | 40.0% | |
| GGGCCAACAACAATTTGAAA+TGG | - | chr8.3:1176393-1176412 | MS.gene042139:CDS | 40.0% | |
| GTTGAGAATGAAGTGACCAA+GGG | - | chr8.3:1175809-1175828 | MS.gene042139:CDS | 40.0% | |
| TACTGATATGTGGGAGAAGT+TGG | - | chr8.3:1176525-1176544 | MS.gene042139:CDS | 40.0% | |
| TCAACTGTTTAACAGTGCAG+AGG | - | chr8.3:1176486-1176505 | MS.gene042139:CDS | 40.0% | |
| TCAGGTGGTAGAAGAAAGAA+GGG | - | chr8.3:1174666-1174685 | MS.gene042139:CDS | 40.0% | |
| TCCCAAGTGGAATGCAAATT+AGG | - | chr8.3:1176757-1176776 | MS.gene042139:CDS | 40.0% | |
| TCCCAATCATAAGGATGCTT+TGG | - | chr8.3:1175088-1175107 | MS.gene042139:CDS | 40.0% | |
| TCTTCCTCTTCTTCCAACAA+AGG | + | chr8.3:1175782-1175801 | None:intergenic | 40.0% | |
| TGAAGAAACAGTGACAAGTG+AGG | - | chr8.3:1176114-1176133 | MS.gene042139:CDS | 40.0% | |
| TGAATGCAAAGAAGTGGAGA+TGG | - | chr8.3:1175982-1176001 | MS.gene042139:CDS | 40.0% | |
| TGATTTCTATGAGGGACTGT+TGG | - | chr8.3:1176366-1176385 | MS.gene042139:CDS | 40.0% | |
| TGCAAAAGACCAATGGAGTT+TGG | + | chr8.3:1176419-1176438 | None:intergenic | 40.0% | |
| TGCAAGTCAATATGAGCATC+AGG | + | chr8.3:1176061-1176080 | None:intergenic | 40.0% | |
| TGGATATTGCTCAGAGATTG+AGG | - | chr8.3:1175108-1175127 | MS.gene042139:CDS | 40.0% | |
| TTACCAGCAGACTCATCTAA+GGG | + | chr8.3:1176247-1176266 | None:intergenic | 40.0% | |
| TTGAAATGGCCAAACTCCAT+TGG | - | chr8.3:1176407-1176426 | MS.gene042139:CDS | 40.0% | |
| TTTACCAGCAGACTCATCTA+AGG | + | chr8.3:1176248-1176267 | None:intergenic | 40.0% | |
| ! | CAAGGATTGTGATGGTGATT+TGG | - | chr8.3:1175613-1175632 | MS.gene042139:CDS | 40.0% |
| ! | CTTGTTGATCTCTAGCTCAT+CGG | + | chr8.3:1176941-1176960 | None:intergenic | 40.0% |
| ! | GCTTTTCGAAAAATCCCAAG+TGG | - | chr8.3:1176744-1176763 | MS.gene042139:CDS | 40.0% |
| ! | GGCTGTTGGTAAGTATGAAT+TGG | - | chr8.3:1175031-1175050 | MS.gene042139:CDS | 40.0% |
| ! | GTTTTGCTGCCAACTGAAAA+TGG | - | chr8.3:1175335-1175354 | MS.gene042139:CDS | 40.0% |
| ! | TTCTCTGGACCATTTTCAGT+TGG | + | chr8.3:1175347-1175366 | None:intergenic | 40.0% |
| !! | CATATTGACTTGCATGAGCT+TGG | - | chr8.3:1176067-1176086 | MS.gene042139:CDS | 40.0% |
| !! | GACCTGTCAACCTTGTTATT+AGG | + | chr8.3:1175308-1175327 | None:intergenic | 40.0% |
| !!! | GGCTGTTTTTCACAGCAATA+GGG | - | chr8.3:1174887-1174906 | MS.gene042139:CDS | 40.0% |
| AAAGAAAAGCCTGGAGCAAC+AGG | - | chr8.3:1175953-1175972 | MS.gene042139:CDS | 45.0% | |
| AGATCCACTTTCATCTCCCT+TGG | + | chr8.3:1175828-1175847 | None:intergenic | 45.0% | |
| AGGAGAAACAACTGACCCAA+CGG | + | chr8.3:1175288-1175307 | None:intergenic | 45.0% | |
| AGTGGATCTCATTCTTCCCT+CGG | - | chr8.3:1175839-1175858 | MS.gene042139:CDS | 45.0% | |
| AGTGGCAGAACAACTTCAAG+TGG | - | chr8.3:1176273-1176292 | MS.gene042139:CDS | 45.0% | |
| ATCAACAAGGAGGCCAATCA+AGG | - | chr8.3:1176952-1176971 | MS.gene042139:CDS | 45.0% | |
| ATTCCCTTAGATGAGTCTGC+TGG | - | chr8.3:1176241-1176260 | MS.gene042139:CDS | 45.0% | |
| CAGGACAACTTTAGGCATCT+GGG | + | chr8.3:1175375-1175394 | None:intergenic | 45.0% | |
| CCAGAAGGATAGGAATCTGT+CGG | - | chr8.3:1175445-1175464 | MS.gene042139:CDS | 45.0% | |
| CGATGAGCTAGAGATCAACA+AGG | - | chr8.3:1176939-1176958 | MS.gene042139:CDS | 45.0% | |
| CGTTGAGAATGAAGTGACCA+AGG | - | chr8.3:1175808-1175827 | MS.gene042139:CDS | 45.0% | |
| CTCGAAAAATGAGAGCCAGA+AGG | - | chr8.3:1175430-1175449 | MS.gene042139:CDS | 45.0% | |
| CTGTCCAAACACCAAATGGT+GGG | - | chr8.3:1174718-1174737 | MS.gene042139:CDS | 45.0% | |
| CTGTGAAAAACAGCCCTATC+AGG | + | chr8.3:1174882-1174901 | None:intergenic | 45.0% | |
| GCCCAAAACACATCCTGATA+GGG | - | chr8.3:1174866-1174885 | MS.gene042139:CDS | 45.0% | |
| GCTTCTGTCCAAACACCAAA+TGG | - | chr8.3:1174714-1174733 | MS.gene042139:CDS | 45.0% | |
| GGATGGTTGGAAGAAAAACC+TGG | - | chr8.3:1176783-1176802 | MS.gene042139:CDS | 45.0% | |
| GGCTTCTGATCCCAATCATA+AGG | - | chr8.3:1175079-1175098 | MS.gene042139:CDS | 45.0% | |
| GGTCAATACCAACATGTGAG+CGG | + | chr8.3:1176039-1176058 | None:intergenic | 45.0% | |
| GTCTGCTGGTAAAGATGTAG+TGG | - | chr8.3:1176255-1176274 | MS.gene042139:CDS | 45.0% | |
| TAAGGCTGCTTCAAAGTTCC+AGG | - | chr8.3:1176156-1176175 | MS.gene042139:CDS | 45.0% | |
| TCAGGACAACTTTAGGCATC+TGG | + | chr8.3:1175376-1175395 | None:intergenic | 45.0% | |
| TCATTATCTCCTGTTGCTCC+AGG | + | chr8.3:1175965-1175984 | None:intergenic | 45.0% | |
| TCCAATTCAACCCCACCATT+TGG | + | chr8.3:1174732-1174751 | None:intergenic | 45.0% | |
| TCCTCTTCTTCCAACAAAGG+TGG | + | chr8.3:1175779-1175798 | None:intergenic | 45.0% | |
| TCTGTCCAAACACCAAATGG+TGG | - | chr8.3:1174717-1174736 | MS.gene042139:CDS | 45.0% | |
| TGAGCTAGAGATCAACAAGG+AGG | - | chr8.3:1176942-1176961 | MS.gene042139:CDS | 45.0% | |
| TGATATGTGGGAGAAGTTGG+AGG | - | chr8.3:1176528-1176547 | MS.gene042139:CDS | 45.0% | |
| TGTCCAAACACCAAATGGTG+GGG | - | chr8.3:1174719-1174738 | MS.gene042139:CDS | 45.0% | |
| ! | ACAGAACGCTTTAAGCTTGC+AGG | - | chr8.3:1176814-1176833 | MS.gene042139:CDS | 45.0% |
| ! | ACCAAATGGTGGGGTTGAAT+TGG | - | chr8.3:1174728-1174747 | MS.gene042139:CDS | 45.0% |
| ! | AGCCCTATCAGGATGTGTTT+TGG | + | chr8.3:1174871-1174890 | None:intergenic | 45.0% |
| ! | GCATTGGCATTCTTCAACTG+GGG | - | chr8.3:1176187-1176206 | MS.gene042139:CDS | 45.0% |
| ! | GCCCTATCAGGATGTGTTTT+GGG | + | chr8.3:1174870-1174889 | None:intergenic | 45.0% |
| ! | TCTTGTTGGGAAGTGGACTT+TGG | + | chr8.3:1176918-1176937 | None:intergenic | 45.0% |
| ! | TTCGAGTTAGATTGCACAGC+AGG | + | chr8.3:1175416-1175435 | None:intergenic | 45.0% |
| ! | TTTGGCACGAGAGAAGTATG+AGG | - | chr8.3:1176324-1176343 | MS.gene042139:CDS | 45.0% |
| !! | ACTCTGAAACTGCAGTTCAC+CGG | + | chr8.3:1175536-1175555 | None:intergenic | 45.0% |
| !! | GGCATTGGCATTCTTCAACT+GGG | - | chr8.3:1176186-1176205 | MS.gene042139:CDS | 45.0% |
| !! | TCTAGCTCATCGGTCTTGTT+GGG | + | chr8.3:1176931-1176950 | None:intergenic | 45.0% |
| !! | TGAGTGTACTTTGGCTCTTC+AGG | - | chr8.3:1174959-1174978 | MS.gene042139:CDS | 45.0% |
| !!! | GGGCTGTTTTTCACAGCAAT+AGG | - | chr8.3:1174886-1174905 | MS.gene042139:CDS | 45.0% |
| AACGACAGAAGACTCGCCTT+CGG | + | chr8.3:1176638-1176657 | None:intergenic | 50.0% | |
| ACAGAGGGCAAAGGAGCTAA+AGG | - | chr8.3:1176552-1176571 | MS.gene042139:CDS | 50.0% | |
| AGAGATTGAGGGCTGCGTTT+GGG | - | chr8.3:1175120-1175139 | MS.gene042139:CDS | 50.0% | |
| AGCAAAGCCCGGACAAATTG+CGG | + | chr8.3:1174990-1175009 | None:intergenic | 50.0% | |
| AGGTTCAGCCGCAATTTGTC+CGG | - | chr8.3:1174979-1174998 | MS.gene042139:CDS | 50.0% | |
| AGTGACAAGTGAGGAAGCTC+AGG | - | chr8.3:1176123-1176142 | MS.gene042139:CDS | 50.0% | |
| AGTGGCTTATGACTGGGTCA+AGG | - | chr8.3:1176291-1176310 | MS.gene042139:CDS | 50.0% | |
| ATGTTCACATGTGCGCTGCT+AGG | - | chr8.3:1176212-1176231 | MS.gene042139:CDS | 50.0% | |
| CACGGACCTAATCCAGCAAT+AGG | + | chr8.3:1175224-1175243 | None:intergenic | 50.0% | |
| CACTGAAGTTCCTGATACCG+AGG | - | chr8.3:1175898-1175917 | MS.gene042139:CDS | 50.0% | |
| CCGACAGATTCCTATCCTTC+TGG | + | chr8.3:1175448-1175467 | None:intergenic | 50.0% | |
| CCTGTCAACATGGGATCCAA+CGG | - | chr8.3:1176456-1176475 | MS.gene042139:CDS | 50.0% | |
| CGCCCAAAACACATCCTGAT+AGG | - | chr8.3:1174865-1174884 | MS.gene042139:CDS | 50.0% | |
| GAAGGATAGGAATCTGTCGG+AGG | - | chr8.3:1175448-1175467 | MS.gene042139:CDS | 50.0% | |
| GCCACCTTTGTTGGAAGAAG+AGG | - | chr8.3:1175775-1175794 | MS.gene042139:CDS | 50.0% | |
| GGAGAAGTTGGAGGAACAGA+GGG | - | chr8.3:1176537-1176556 | MS.gene042139:CDS | 50.0% | |
| GGTGCTCCTATTGCTGGATT+AGG | - | chr8.3:1175215-1175234 | MS.gene042139:CDS | 50.0% | |
| GGTGGTAGAAGAAAGAAGGG+TGG | - | chr8.3:1174669-1174688 | MS.gene042139:CDS | 50.0% | |
| GTGACCAAGGGAGATGAAAG+TGG | - | chr8.3:1175821-1175840 | MS.gene042139:CDS | 50.0% | |
| TAAGCTTGCAGGAGCTTCTG+AGG | - | chr8.3:1176825-1176844 | MS.gene042139:CDS | 50.0% | |
| TCTTCTGTCGTTGGAGGTCA+GGG | - | chr8.3:1176646-1176665 | MS.gene042139:CDS | 50.0% | |
| TGCTTCAAAGTTCCAGGAGG+TGG | - | chr8.3:1176162-1176181 | MS.gene042139:CDS | 50.0% | |
| TGGGATGGAGCTATGTTCAG+AGG | - | chr8.3:1176087-1176106 | MS.gene042139:CDS | 50.0% | |
| TGTAGAAGTTAGTCCGGAGC+AGG | - | chr8.3:1175751-1175770 | MS.gene042139:CDS | 50.0% | |
| TGTCGGAGGTTTCTATTCGG+TGG | - | chr8.3:1175462-1175481 | MS.gene042139:CDS | 50.0% | |
| TTCAAAGTTCCAGGAGGTGG+CGG | - | chr8.3:1176165-1176184 | MS.gene042139:CDS | 50.0% | |
| ! | CAGCTTTTCCGCTCACATGT+TGG | - | chr8.3:1176028-1176047 | MS.gene042139:CDS | 50.0% |
| ! | CTCTAGCTCATCGGTCTTGT+TGG | + | chr8.3:1176932-1176951 | None:intergenic | 50.0% |
| ! | TGACTTGCATGAGCTTGGGA+TGG | - | chr8.3:1176072-1176091 | MS.gene042139:CDS | 50.0% |
| !! | AAACAGGGAAGTGCTACCGA+AGG | - | chr8.3:1176619-1176638 | MS.gene042139:CDS | 50.0% |
| !! | ATCCAGCAATAGGAGCACCA+CGG | + | chr8.3:1175214-1175233 | None:intergenic | 50.0% |
| !! | CAACCCCACCATTTGGTGTT+TGG | + | chr8.3:1174725-1174744 | None:intergenic | 50.0% |
| !! | CGGCATTGGCATTCTTCAAC+TGG | - | chr8.3:1176185-1176204 | MS.gene042139:CDS | 50.0% |
| !! | TATGAGGGACTGTTGGCTCT+GGG | - | chr8.3:1176373-1176392 | MS.gene042139:CDS | 50.0% |
| !! | TCATCGGTCTTGTTGGGAAG+TGG | + | chr8.3:1176925-1176944 | None:intergenic | 50.0% |
| AACAAAGGTGGCTCCTGCTC+CGG | + | chr8.3:1175767-1175786 | None:intergenic | 55.0% | |
| AAGGGGGCAAATTCTGCCGT+TGG | - | chr8.3:1175269-1175288 | MS.gene042139:CDS | 55.0% | |
| AGAAGCTGCTGAGCAAGCAG+TGG | - | chr8.3:1176684-1176703 | MS.gene042139:CDS | 55.0% | |
| AGCGTTCTGTTGCAGCATCC+AGG | + | chr8.3:1176804-1176823 | None:intergenic | 55.0% | |
| AGGGGGCAAATTCTGCCGTT+GGG | - | chr8.3:1175270-1175289 | MS.gene042139:CDS | 55.0% | |
| CACAGCAGGATCTCCACAGT+CGG | - | chr8.3:1175156-1175175 | MS.gene042139:CDS | 55.0% | |
| CAGAGATTGAGGGCTGCGTT+TGG | - | chr8.3:1175119-1175138 | MS.gene042139:CDS | 55.0% | |
| CCGTTGGATCCCATGTTGAC+AGG | + | chr8.3:1176459-1176478 | None:intergenic | 55.0% | |
| GAAGGCGAGTCTTCTGTCGT+TGG | - | chr8.3:1176637-1176656 | MS.gene042139:CDS | 55.0% | |
| GGCTGCTTCAAAGTTCCAGG+AGG | - | chr8.3:1176159-1176178 | MS.gene042139:CDS | 55.0% | |
| GGGAGAAGTTGGAGGAACAG+AGG | - | chr8.3:1176536-1176555 | MS.gene042139:CDS | 55.0% | |
| GGTTCAGCCGCAATTTGTCC+GGG | - | chr8.3:1174980-1174999 | MS.gene042139:CDS | 55.0% | |
| GTCTTCTGTCGTTGGAGGTC+AGG | - | chr8.3:1176645-1176664 | MS.gene042139:CDS | 55.0% | |
| GTTGGAGGAACAGAGGGCAA+AGG | - | chr8.3:1176543-1176562 | MS.gene042139:CDS | 55.0% | |
| TAGGTCCGTGTTTGCCAGCA+CGG | - | chr8.3:1175234-1175253 | MS.gene042139:CDS | 55.0% | |
| TGTCCGGGCTTTGCTTCGTA+GGG | - | chr8.3:1174995-1175014 | MS.gene042139:CDS | 55.0% | |
| TTAGGTGCTTCTGCTGTCCG+TGG | - | chr8.3:1175194-1175213 | MS.gene042139:CDS | 55.0% | |
| TTCAGGGACAGAGTCACCGA+GGG | + | chr8.3:1175858-1175877 | None:intergenic | 55.0% | |
| TTGTCCGGGCTTTGCTTCGT+AGG | - | chr8.3:1174994-1175013 | MS.gene042139:CDS | 55.0% | |
| ! | CATCAGGCTTGCTCAGATGC+CGG | - | chr8.3:1175514-1175533 | MS.gene042139:CDS | 55.0% |
| !! | CTATGAGGGACTGTTGGCTC+TGG | - | chr8.3:1176372-1176391 | MS.gene042139:CDS | 55.0% |
| !! | GGCATCTGGGTCTTGTTCTC+TGG | + | chr8.3:1175362-1175381 | None:intergenic | 55.0% |
| CTTCAGGGACAGAGTCACCG+AGG | + | chr8.3:1175859-1175878 | None:intergenic | 60.0% | |
| GAGCCCTACGAAGCAAAGCC+CGG | + | chr8.3:1175001-1175020 | None:intergenic | 60.0% | |
| GGAGCAGGAGCCACCTTTGT+TGG | - | chr8.3:1175766-1175785 | MS.gene042139:CDS | 60.0% | |
| GGCGAGTCTTCTGTCGTTGG+AGG | - | chr8.3:1176640-1176659 | MS.gene042139:CDS | 60.0% | |
| GGCTTTGCTTCGTAGGGCTC+GGG | - | chr8.3:1175001-1175020 | MS.gene042139:CDS | 60.0% | |
| GGGCTTTGCTTCGTAGGGCT+CGG | - | chr8.3:1175000-1175019 | MS.gene042139:CDS | 60.0% | |
| GTCCGTGGTGCTCCTATTGC+TGG | - | chr8.3:1175209-1175228 | MS.gene042139:CDS | 60.0% | |
| TCCTGCTGTGCTTCCTGACG+AGG | + | chr8.3:1175146-1175165 | None:intergenic | 60.0% | |
| TTTGCCCCCTTCTTCGACGC+AGG | + | chr8.3:1175260-1175279 | None:intergenic | 60.0% | |
| !! | GCAGAAGCACCTAACGCAGC+AGG | + | chr8.3:1175188-1175207 | None:intergenic | 60.0% |
| ACGGCCTGCGTCGAAGAAGG+GGG | - | chr8.3:1175253-1175272 | MS.gene042139:CDS | 65.0% | |
| AGCACGGCCTGCGTCGAAGA+AGG | - | chr8.3:1175250-1175269 | MS.gene042139:CDS | 65.0% | |
| ATGCCAATGCCGCCACCTCC+TGG | + | chr8.3:1176177-1176196 | None:intergenic | 65.0% | |
| CACGGCCTGCGTCGAAGAAG+GGG | - | chr8.3:1175252-1175271 | MS.gene042139:CDS | 65.0% | |
| GCACCTAACGCAGCAGGCGA+AGG | + | chr8.3:1175182-1175201 | None:intergenic | 65.0% | |
| GCACGGCCTGCGTCGAAGAA+GGG | - | chr8.3:1175251-1175270 | MS.gene042139:CDS | 65.0% | |
| TCGTAGGGCTCGGGCGTTTG+AGG | - | chr8.3:1175010-1175029 | MS.gene042139:CDS | 65.0% | |
| TTCTTCGACGCAGGCCGTGC+TGG | + | chr8.3:1175251-1175270 | None:intergenic | 65.0% | |
| ! | GCAGGCCGTGCTGGCAAACA+CGG | + | chr8.3:1175242-1175261 | None:intergenic | 65.0% |
| ! | GCCTCGTCAGGAAGCACAGC+AGG | - | chr8.3:1175142-1175161 | MS.gene042139:CDS | 65.0% |
| ! | GCTCGGGCGTTTGAGGCTGT+TGG | - | chr8.3:1175017-1175036 | MS.gene042139:CDS | 65.0% |
| ! | GTTCCAGGAGGTGGCGGCAT+TGG | - | chr8.3:1176171-1176190 | MS.gene042139:CDS | 65.0% |
| CAGCAGGCGAAGGCCGACTG+TGG | + | chr8.3:1175172-1175191 | None:intergenic | 70.0% | |
| CGGCCTTCGCCTGCTGCGTT+AGG | - | chr8.3:1175176-1175195 | MS.gene042139:CDS | 70.0% | |
| GGCTGCGTTTGGGCCTCGTC+AGG | - | chr8.3:1175130-1175149 | MS.gene042139:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 1174657 | 1176978 | 1174657 | ID=MS.gene042139 |
| chr8.3 | mRNA | 1174657 | 1176978 | 1174657 | ID=MS.gene042139.t1;Parent=MS.gene042139 |
| chr8.3 | exon | 1174657 | 1176978 | 1174657 | ID=MS.gene042139.t1.exon1;Parent=MS.gene042139.t1 |
| chr8.3 | CDS | 1174657 | 1176978 | 1174657 | ID=cds.MS.gene042139.t1;Parent=MS.gene042139.t1 |
| Gene Sequence |
| Protein sequence |
