Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016205.t1 | RHN77126.1 | 100 | 308 | 0 | 0 | 1 | 308 | 49 | 356 | 9.10E-174 | 619.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016205.t1 | Q8H1Q2 | 77.3 | 299 | 67 | 1 | 1 | 298 | 48 | 346 | 3.5e-134 | 479.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016205.t1 | A0A072VEC7 | 100.0 | 308 | 0 | 0 | 1 | 308 | 1 | 308 | 6.5e-174 | 619.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene016205 | MS.gene39890 | PPI |
MS.gene49327 | MS.gene016205 | PPI |
MS.gene016205 | MS.gene036137 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016205.t1 | MTR_1g016110 | 100.000 | 308 | 0 | 0 | 1 | 308 | 1 | 308 | 0.0 | 628 |
MS.gene016205.t1 | MTR_1g016110 | 100.000 | 308 | 0 | 0 | 1 | 308 | 48 | 355 | 0.0 | 625 |
MS.gene016205.t1 | MTR_1g019620 | 99.351 | 308 | 2 | 0 | 1 | 308 | 48 | 355 | 0.0 | 620 |
MS.gene016205.t1 | MTR_1g070360 | 34.564 | 298 | 143 | 10 | 7 | 296 | 17 | 270 | 2.15e-42 | 147 |
MS.gene016205.t1 | MTR_6g086600 | 40.000 | 180 | 103 | 3 | 8 | 187 | 164 | 338 | 3.20e-31 | 122 |
MS.gene016205.t1 | MTR_6g086600 | 40.000 | 180 | 103 | 3 | 8 | 187 | 173 | 347 | 3.34e-31 | 122 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016205.t1 | AT5G50960 | 76.721 | 305 | 68 | 2 | 1 | 304 | 48 | 350 | 1.52e-172 | 482 |
MS.gene016205.t1 | AT4G19540 | 43.005 | 193 | 100 | 5 | 7 | 196 | 38 | 223 | 2.56e-38 | 138 |
MS.gene016205.t1 | AT3G24430 | 39.444 | 180 | 104 | 3 | 8 | 187 | 172 | 346 | 3.00e-31 | 122 |
Find 78 sgRNAs with CRISPR-Local
Find 89 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCGATTAAATTCAGCATTTC+AGG | 0.187756 | 1.2:+6409349 | None:intergenic |
CCTTCTAGGCCAAGCATCTT+TGG | 0.224706 | 1.2:+6409850 | None:intergenic |
GGTGTATCTCTTGACCTTCT+AGG | 0.281189 | 1.2:+6409836 | None:intergenic |
ATCCAGACGAAGCTGTTATA+TGG | 0.325193 | 1.2:-6409738 | MS.gene016205:CDS |
TTTATGAAGATTACAGATAA+TGG | 0.328286 | 1.2:-6409424 | MS.gene016205:CDS |
GAGATGGCGGTACCCTTTCT+TGG | 0.328779 | 1.2:-6409274 | MS.gene016205:CDS |
AATCTCGGGGTCATGTCAAT+TGG | 0.348522 | 1.2:-6409775 | MS.gene016205:CDS |
CTTCTAGGCCAAGCATCTTT+GGG | 0.359162 | 1.2:+6409851 | None:intergenic |
AAAGTTGGAGTGAAAGTTCT+TGG | 0.364693 | 1.2:-6409496 | MS.gene016205:CDS |
TTTCACAGTGGCCATTCTTT+CGG | 0.375809 | 1.2:+6410005 | None:intergenic |
CTAATTGTTGATGCTCCGCC+TGG | 0.377996 | 1.2:-6409646 | MS.gene016205:CDS |
CAGCTAACGCAAATGCCAGC+TGG | 0.379548 | 1.2:+6409926 | None:intergenic |
CCAAAGATGCTTGGCCTAGA+AGG | 0.402010 | 1.2:-6409850 | MS.gene016205:CDS |
CCAAGCATCTTTGGGATGCT+TGG | 0.406720 | 1.2:+6409859 | None:intergenic |
GTCTATGTTGAGTCTAATCT+CGG | 0.416769 | 1.2:-6409790 | MS.gene016205:CDS |
CACTGTGAAACATAAGATAC+TGG | 0.420840 | 1.2:-6409992 | MS.gene016205:CDS |
AAGTTGGAGTGAAAGTTCTT+GGG | 0.429446 | 1.2:-6409495 | MS.gene016205:CDS |
GGCGGTACCCTTTCTTGGTA+AGG | 0.430728 | 1.2:-6409269 | MS.gene016205:CDS |
CATAAGATACTGGTCTTGTC+AGG | 0.432544 | 1.2:-6409982 | MS.gene016205:CDS |
TAAAGGAACCTTACCAAGAA+AGG | 0.434925 | 1.2:+6409261 | None:intergenic |
AGATGTTACGGAGTGGATAT+CGG | 0.437420 | 1.2:-6409392 | MS.gene016205:CDS |
ACTTGAGATTTGAGATGGGC+TGG | 0.443213 | 1.2:+6409446 | None:intergenic |
AGCTAACGCAAATGCCAGCT+GGG | 0.447107 | 1.2:+6409927 | None:intergenic |
CTCCATATAACAGCTTCGTC+TGG | 0.454307 | 1.2:+6409736 | None:intergenic |
CATAAACTTGAGATTTGAGA+TGG | 0.455458 | 1.2:+6409441 | None:intergenic |
CGTCTACATTAGCAGCATCT+AGG | 0.458881 | 1.2:+6409590 | None:intergenic |
CTTCTGGACATTGATATTTG+TGG | 0.463857 | 1.2:-6409883 | MS.gene016205:CDS |
ATCTCGGGGTCATGTCAATT+GGG | 0.470649 | 1.2:-6409774 | MS.gene016205:CDS |
CTTTGCAAGGCAGCCGAAGA+AGG | 0.473054 | 1.2:-6409229 | MS.gene016205:CDS |
TGGTGAGATGAAAGATGTTA+CGG | 0.483466 | 1.2:-6409404 | MS.gene016205:CDS |
ATGTGTTCATCTGAGGTTCC+AGG | 0.485714 | 1.2:+6409628 | None:intergenic |
GGCATTTGCGTTAGCTGCAA+GGG | 0.486589 | 1.2:-6409920 | MS.gene016205:CDS |
GAGACCAACCAAGGTTGCTC+TGG | 0.487893 | 1.2:+6409815 | None:intergenic |
ACAATCTTTATCTGCAAAGC+AGG | 0.488362 | 1.2:+6409201 | None:intergenic |
AAAGCAGGATCTGCCTTCTT+CGG | 0.495633 | 1.2:+6409216 | None:intergenic |
GATTTGAGATGGGCTGGGAC+AGG | 0.504393 | 1.2:+6409452 | None:intergenic |
TTGCAAAGCTGTGGATCTAA+AGG | 0.505094 | 1.2:+6409244 | None:intergenic |
GGTTGCCATTGCCGAAAGAA+TGG | 0.507040 | 1.2:-6410016 | MS.gene016205:CDS |
ATACTGGTCTTGTCAGGAAA+GGG | 0.511385 | 1.2:-6409976 | MS.gene016205:CDS |
CTTGAGATTTGAGATGGGCT+GGG | 0.511450 | 1.2:+6409447 | None:intergenic |
GTATTTGATAGTAGCGGTGG+TGG | 0.514266 | 1.2:-6409316 | MS.gene016205:CDS |
AAAGGAACCTTACCAAGAAA+GGG | 0.525559 | 1.2:+6409262 | None:intergenic |
TGGCATTTGCGTTAGCTGCA+AGG | 0.531152 | 1.2:-6409921 | MS.gene016205:CDS |
CCAAGCATCCCAAAGATGCT+TGG | 0.531277 | 1.2:-6409859 | MS.gene016205:CDS |
TCTATGTTGAGTCTAATCTC+GGG | 0.532182 | 1.2:-6409789 | MS.gene016205:CDS |
GATAAGCTGATGGAAACTAG+TGG | 0.534659 | 1.2:-6409145 | MS.gene016205:CDS |
GAGATACACCAGAGCAACCT+TGG | 0.541471 | 1.2:-6409823 | MS.gene016205:CDS |
GATACTGGTCTTGTCAGGAA+AGG | 0.542244 | 1.2:-6409977 | MS.gene016205:CDS |
AGTGGCCATTCTTTCGGCAA+TGG | 0.546079 | 1.2:+6410011 | None:intergenic |
TTGTCAGGAAAGGGAGGTGT+TGG | 0.547516 | 1.2:-6409967 | MS.gene016205:CDS |
TCGGCTGCCTTGCAAAGCTG+TGG | 0.547932 | 1.2:+6409235 | None:intergenic |
TACACCAGAGCAACCTTGGT+TGG | 0.551299 | 1.2:-6409819 | MS.gene016205:CDS |
AGTTGGAGTGAAAGTTCTTG+GGG | 0.553652 | 1.2:-6409494 | MS.gene016205:CDS |
ATAACAGCTTCGTCTGGATG+AGG | 0.554608 | 1.2:+6409742 | None:intergenic |
AGATTAGACTCAACATAGAC+AGG | 0.558926 | 1.2:+6409793 | None:intergenic |
AATTGAAATGTGTTCATCTG+AGG | 0.559191 | 1.2:+6409621 | None:intergenic |
ATAAACTTGAGATTTGAGAT+GGG | 0.559421 | 1.2:+6409442 | None:intergenic |
AAAGATAATAGATAAGCTGA+TGG | 0.562227 | 1.2:-6409155 | MS.gene016205:CDS |
AACTAGTGGGCTGTCAATGA+CGG | 0.568788 | 1.2:-6409131 | MS.gene016205:CDS |
ACTATCAAATACTTCACTGC+AGG | 0.571986 | 1.2:+6409327 | None:intergenic |
CTGTCAATGACGGAAAGCAA+TGG | 0.575375 | 1.2:-6409121 | MS.gene016205:CDS |
GACGAAGCTGTTATATGGAG+AGG | 0.584494 | 1.2:-6409733 | MS.gene016205:CDS |
ATAAGCTGATGGAAACTAGT+GGG | 0.602164 | 1.2:-6409144 | MS.gene016205:CDS |
TTTAGATCCACAGCTTTGCA+AGG | 0.603851 | 1.2:-6409242 | MS.gene016205:CDS |
GTTGAAGATGTGTAACGAGA+TGG | 0.614173 | 1.2:-6409290 | MS.gene016205:CDS |
AAGAGAGACTTGTTGAGGAG+TGG | 0.628280 | 1.2:+6409552 | None:intergenic |
AGATGAAAGATGTTACGGAG+TGG | 0.628653 | 1.2:-6409399 | MS.gene016205:CDS |
CTAGATGCTGCTAATGTAGA+CGG | 0.629983 | 1.2:-6409589 | MS.gene016205:CDS |
CTGGTCTTGTCAGGAAAGGG+AGG | 0.640582 | 1.2:-6409973 | MS.gene016205:CDS |
GAAGTATTTGATAGTAGCGG+TGG | 0.649921 | 1.2:-6409319 | MS.gene016205:CDS |
TCAATAAGAGAGACTTGTTG+AGG | 0.650660 | 1.2:+6409547 | None:intergenic |
CTATGTTGAGTCTAATCTCG+GGG | 0.653466 | 1.2:-6409788 | MS.gene016205:CDS |
AGTGAAGTATTTGATAGTAG+CGG | 0.680092 | 1.2:-6409322 | MS.gene016205:CDS |
GGGGTTGTAGAGAATATGAG+TGG | 0.686460 | 1.2:-6409475 | MS.gene016205:CDS |
CATAGACAGGAGACCAACCA+AGG | 0.702138 | 1.2:+6409806 | None:intergenic |
GAAGATGTGTAACGAGATGG+CGG | 0.710160 | 1.2:-6409287 | MS.gene016205:CDS |
CAGTATCTTATGTTTCACAG+TGG | 0.751734 | 1.2:+6409993 | None:intergenic |
TGTTCATCTGAGGTTCCAGG+CGG | 0.754863 | 1.2:+6409631 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTATGAAGATTACAGATAA+TGG | - | chr1.2:6409708-6409727 | MS.gene016205:CDS | 20.0% |
!!! | AGTTTTTAAAAGACGTTTAT+TGG | - | chr1.2:6409448-6409467 | MS.gene016205:CDS | 20.0% |
!!! | GTTTTTAAAAGACGTTTATT+GGG | - | chr1.2:6409449-6409468 | MS.gene016205:CDS | 20.0% |
!!! | TTTTTAAAAGACGTTTATTG+GGG | - | chr1.2:6409450-6409469 | MS.gene016205:CDS | 20.0% |
! | AAAGATAATAGATAAGCTGA+TGG | - | chr1.2:6409977-6409996 | MS.gene016205:CDS | 25.0% |
!! | ATAAACTTGAGATTTGAGAT+GGG | + | chr1.2:6409693-6409712 | None:intergenic | 25.0% |
AATTGAAATGTGTTCATCTG+AGG | + | chr1.2:6409514-6409533 | None:intergenic | 30.0% | |
CATAAACTTGAGATTTGAGA+TGG | + | chr1.2:6409694-6409713 | None:intergenic | 30.0% | |
! | AGTGAAGTATTTGATAGTAG+CGG | - | chr1.2:6409810-6409829 | MS.gene016205:CDS | 30.0% |
! | GTGAATTTTTGCAAGAAAGT+TGG | - | chr1.2:6409621-6409640 | MS.gene016205:CDS | 30.0% |
! | TCTATTATCTTTTGTAACGC+TGG | + | chr1.2:6409969-6409988 | None:intergenic | 30.0% |
AAAGGAACCTTACCAAGAAA+GGG | + | chr1.2:6409873-6409892 | None:intergenic | 35.0% | |
AAAGTTGGAGTGAAAGTTCT+TGG | - | chr1.2:6409636-6409655 | MS.gene016205:CDS | 35.0% | |
AAGTTGGAGTGAAAGTTCTT+GGG | - | chr1.2:6409637-6409656 | MS.gene016205:CDS | 35.0% | |
ACAATCTTTATCTGCAAAGC+AGG | + | chr1.2:6409934-6409953 | None:intergenic | 35.0% | |
ACTATCAAATACTTCACTGC+AGG | + | chr1.2:6409808-6409827 | None:intergenic | 35.0% | |
AGATTAGACTCAACATAGAC+AGG | + | chr1.2:6409342-6409361 | None:intergenic | 35.0% | |
ATAAGCTGATGGAAACTAGT+GGG | - | chr1.2:6409988-6410007 | MS.gene016205:CDS | 35.0% | |
CACTGTGAAACATAAGATAC+TGG | - | chr1.2:6409140-6409159 | MS.gene016205:CDS | 35.0% | |
CAGTATCTTATGTTTCACAG+TGG | + | chr1.2:6409142-6409161 | None:intergenic | 35.0% | |
CTTCTGGACATTGATATTTG+TGG | - | chr1.2:6409249-6409268 | MS.gene016205:CDS | 35.0% | |
GCGATTAAATTCAGCATTTC+AGG | + | chr1.2:6409786-6409805 | None:intergenic | 35.0% | |
GTCTATGTTGAGTCTAATCT+CGG | - | chr1.2:6409342-6409361 | MS.gene016205:CDS | 35.0% | |
TAAAGGAACCTTACCAAGAA+AGG | + | chr1.2:6409874-6409893 | None:intergenic | 35.0% | |
TCTATGTTGAGTCTAATCTC+GGG | - | chr1.2:6409343-6409362 | MS.gene016205:CDS | 35.0% | |
TGGTGAGATGAAAGATGTTA+CGG | - | chr1.2:6409728-6409747 | MS.gene016205:CDS | 35.0% | |
!! | TCAATAAGAGAGACTTGTTG+AGG | + | chr1.2:6409588-6409607 | None:intergenic | 35.0% |
AGATGAAAGATGTTACGGAG+TGG | - | chr1.2:6409733-6409752 | MS.gene016205:CDS | 40.0% | |
AGATGTTACGGAGTGGATAT+CGG | - | chr1.2:6409740-6409759 | MS.gene016205:CDS | 40.0% | |
AGTTGGAGTGAAAGTTCTTG+GGG | - | chr1.2:6409638-6409657 | MS.gene016205:CDS | 40.0% | |
ATCCAGACGAAGCTGTTATA+TGG | - | chr1.2:6409394-6409413 | MS.gene016205:CDS | 40.0% | |
CTAGATGCTGCTAATGTAGA+CGG | - | chr1.2:6409543-6409562 | MS.gene016205:CDS | 40.0% | |
CTATGTTGAGTCTAATCTCG+GGG | - | chr1.2:6409344-6409363 | MS.gene016205:CDS | 40.0% | |
GATAAGCTGATGGAAACTAG+TGG | - | chr1.2:6409987-6410006 | MS.gene016205:CDS | 40.0% | |
GTTGAAGATGTGTAACGAGA+TGG | - | chr1.2:6409842-6409861 | MS.gene016205:CDS | 40.0% | |
TTGCAAAGCTGTGGATCTAA+AGG | + | chr1.2:6409891-6409910 | None:intergenic | 40.0% | |
TTTAGATCCACAGCTTTGCA+AGG | - | chr1.2:6409890-6409909 | MS.gene016205:CDS | 40.0% | |
TTTCACAGTGGCCATTCTTT+CGG | + | chr1.2:6409130-6409149 | None:intergenic | 40.0% | |
! | GAAGTATTTGATAGTAGCGG+TGG | - | chr1.2:6409813-6409832 | MS.gene016205:CDS | 40.0% |
!! | ATACTGGTCTTGTCAGGAAA+GGG | - | chr1.2:6409156-6409175 | MS.gene016205:CDS | 40.0% |
!! | CATAAGATACTGGTCTTGTC+AGG | - | chr1.2:6409150-6409169 | MS.gene016205:CDS | 40.0% |
!! | TTGATAAGCCCATTTTTGCG+TGG | + | chr1.2:6409426-6409445 | None:intergenic | 40.0% |
!!! | GGATTTTCAAGTTGGTCTTC+TGG | - | chr1.2:6409233-6409252 | MS.gene016205:CDS | 40.0% |
AAAGCAGGATCTGCCTTCTT+CGG | + | chr1.2:6409919-6409938 | None:intergenic | 45.0% | |
AATCTCGGGGTCATGTCAAT+TGG | - | chr1.2:6409357-6409376 | MS.gene016205:CDS | 45.0% | |
ATAACAGCTTCGTCTGGATG+AGG | + | chr1.2:6409393-6409412 | None:intergenic | 45.0% | |
ATCTCGGGGTCATGTCAATT+GGG | - | chr1.2:6409358-6409377 | MS.gene016205:CDS | 45.0% | |
CGTCTACATTAGCAGCATCT+AGG | + | chr1.2:6409545-6409564 | None:intergenic | 45.0% | |
CTCCATATAACAGCTTCGTC+TGG | + | chr1.2:6409399-6409418 | None:intergenic | 45.0% | |
CTTCTAGGCCAAGCATCTTT+GGG | + | chr1.2:6409284-6409303 | None:intergenic | 45.0% | |
GAAGATGTGTAACGAGATGG+CGG | - | chr1.2:6409845-6409864 | MS.gene016205:CDS | 45.0% | |
GACGAAGCTGTTATATGGAG+AGG | - | chr1.2:6409399-6409418 | MS.gene016205:CDS | 45.0% | |
GGGGTTGTAGAGAATATGAG+TGG | - | chr1.2:6409657-6409676 | MS.gene016205:CDS | 45.0% | |
GGTGTATCTCTTGACCTTCT+AGG | + | chr1.2:6409299-6409318 | None:intergenic | 45.0% | |
! | ACTTGAGATTTGAGATGGGC+TGG | + | chr1.2:6409689-6409708 | None:intergenic | 45.0% |
! | ATGTGTTCATCTGAGGTTCC+AGG | + | chr1.2:6409507-6409526 | None:intergenic | 45.0% |
! | CTGTCAATGACGGAAAGCAA+TGG | - | chr1.2:6410011-6410030 | MS.gene016205:CDS | 45.0% |
! | CTTGAGATTTGAGATGGGCT+GGG | + | chr1.2:6409688-6409707 | None:intergenic | 45.0% |
! | GTATTTGATAGTAGCGGTGG+TGG | - | chr1.2:6409816-6409835 | MS.gene016205:CDS | 45.0% |
!! | AACTAGTGGGCTGTCAATGA+CGG | - | chr1.2:6410001-6410020 | MS.gene016205:CDS | 45.0% |
!! | AAGAGAGACTTGTTGAGGAG+TGG | + | chr1.2:6409583-6409602 | None:intergenic | 45.0% |
!! | GATACTGGTCTTGTCAGGAA+AGG | - | chr1.2:6409155-6409174 | MS.gene016205:CDS | 45.0% |
!!! | GCTGCAAGGGATTTTCAAGT+TGG | - | chr1.2:6409225-6409244 | MS.gene016205:CDS | 45.0% |
AGCTAACGCAAATGCCAGCT+GGG | + | chr1.2:6409208-6409227 | None:intergenic | 50.0% | |
AGTGGCCATTCTTTCGGCAA+TGG | + | chr1.2:6409124-6409143 | None:intergenic | 50.0% | |
CATAGACAGGAGACCAACCA+AGG | + | chr1.2:6409329-6409348 | None:intergenic | 50.0% | |
CCAAAGATGCTTGGCCTAGA+AGG | - | chr1.2:6409282-6409301 | MS.gene016205:CDS | 50.0% | |
CCAAGCATCCCAAAGATGCT+TGG | - | chr1.2:6409273-6409292 | MS.gene016205:CDS | 50.0% | |
CCTTCTAGGCCAAGCATCTT+TGG | + | chr1.2:6409285-6409304 | None:intergenic | 50.0% | |
CTAATTGTTGATGCTCCGCC+TGG | - | chr1.2:6409486-6409505 | MS.gene016205:CDS | 50.0% | |
GAGATACACCAGAGCAACCT+TGG | - | chr1.2:6409309-6409328 | MS.gene016205:CDS | 50.0% | |
GGAGAGGTCCACGCAAAAAT+GGG | - | chr1.2:6409415-6409434 | MS.gene016205:CDS | 50.0% | |
GGCATTTGCGTTAGCTGCAA+GGG | - | chr1.2:6409212-6409231 | MS.gene016205:CDS | 50.0% | |
GGTTGCCATTGCCGAAAGAA+TGG | - | chr1.2:6409116-6409135 | MS.gene016205:CDS | 50.0% | |
TACACCAGAGCAACCTTGGT+TGG | - | chr1.2:6409313-6409332 | MS.gene016205:CDS | 50.0% | |
TGGAGAGGTCCACGCAAAAA+TGG | - | chr1.2:6409414-6409433 | MS.gene016205:CDS | 50.0% | |
TGGCATTTGCGTTAGCTGCA+AGG | - | chr1.2:6409211-6409230 | MS.gene016205:CDS | 50.0% | |
! | TGTTCATCTGAGGTTCCAGG+CGG | + | chr1.2:6409504-6409523 | None:intergenic | 50.0% |
! | TTGTCAGGAAAGGGAGGTGT+TGG | - | chr1.2:6409165-6409184 | MS.gene016205:CDS | 50.0% |
!! | CCAAGCATCTTTGGGATGCT+TGG | + | chr1.2:6409276-6409295 | None:intergenic | 50.0% |
CAGCTAACGCAAATGCCAGC+TGG | + | chr1.2:6409209-6409228 | None:intergenic | 55.0% | |
CTTTGCAAGGCAGCCGAAGA+AGG | - | chr1.2:6409903-6409922 | MS.gene016205:CDS | 55.0% | |
GAGACCAACCAAGGTTGCTC+TGG | + | chr1.2:6409320-6409339 | None:intergenic | 55.0% | |
GGCGGTACCCTTTCTTGGTA+AGG | - | chr1.2:6409863-6409882 | MS.gene016205:CDS | 55.0% | |
! | GAGATGGCGGTACCCTTTCT+TGG | - | chr1.2:6409858-6409877 | MS.gene016205:CDS | 55.0% |
! | GAGCACATTTTCTGCCCAGC+TGG | - | chr1.2:6409191-6409210 | MS.gene016205:CDS | 55.0% |
!! | CTGGTCTTGTCAGGAAAGGG+AGG | - | chr1.2:6409159-6409178 | MS.gene016205:CDS | 55.0% |
!! | GATTTGAGATGGGCTGGGAC+AGG | + | chr1.2:6409683-6409702 | None:intergenic | 55.0% |
TCGGCTGCCTTGCAAAGCTG+TGG | + | chr1.2:6409900-6409919 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 6409114 | 6410040 | 6409114 | ID=MS.gene016205 |
chr1.2 | mRNA | 6409114 | 6410040 | 6409114 | ID=MS.gene016205.t1;Parent=MS.gene016205 |
chr1.2 | exon | 6409114 | 6410040 | 6409114 | ID=MS.gene016205.t1.exon1;Parent=MS.gene016205.t1 |
chr1.2 | CDS | 6409114 | 6410040 | 6409114 | ID=cds.MS.gene016205.t1;Parent=MS.gene016205.t1 |
Gene Sequence |
Protein sequence |