Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017631.t1 | XP_024629324.1 | 95.3 | 275 | 10 | 1 | 1 | 272 | 1 | 275 | 7.50E-39 | 171 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017631.t1 | P27484 | 65.4 | 81 | 25 | 1 | 1 | 78 | 1 | 81 | 6.5e-23 | 109.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017631.t1 | A0A396GLK6 | 95.3 | 275 | 10 | 1 | 1 | 272 | 1 | 275 | 5.4e-39 | 171.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene017631.t1 | TF | CSD |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene58125 | MS.gene017631 | PPI |
| MS.gene70271 | MS.gene017631 | PPI |
| MS.gene28445 | MS.gene017631 | PPI |
| MS.gene017631 | MS.gene030675 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017631.t1 | AT4G36020 | 46.403 | 278 | 124 | 6 | 1 | 271 | 6 | 265 | 5.37e-58 | 186 |
| MS.gene017631.t1 | AT4G36020 | 43.750 | 304 | 128 | 7 | 1 | 271 | 6 | 299 | 6.31e-57 | 184 |
| MS.gene017631.t1 | AT4G36020 | 43.750 | 304 | 128 | 7 | 1 | 271 | 6 | 299 | 6.31e-57 | 184 |
| MS.gene017631.t1 | AT2G17870 | 45.118 | 297 | 128 | 6 | 5 | 271 | 10 | 301 | 4.54e-46 | 156 |
| MS.gene017631.t1 | AT3G42860 | 30.986 | 142 | 68 | 3 | 140 | 271 | 238 | 359 | 4.89e-15 | 74.7 |
| MS.gene017631.t1 | AT3G42860 | 33.987 | 153 | 76 | 6 | 79 | 216 | 217 | 359 | 5.32e-15 | 74.3 |
| MS.gene017631.t1 | AT3G43590 | 24.107 | 224 | 98 | 5 | 90 | 272 | 153 | 345 | 3.12e-12 | 66.6 |
Find 106 sgRNAs with CRISPR-Local
Find 113 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAACGGTGGCGGTGGATA+TGG | 0.297469 | 8.2:+29587039 | MS.gene017631:CDS |
| AGGGATTGTGTTGAGGCTTC+TGG | 0.315257 | 8.2:+29587351 | MS.gene017631:CDS |
| TCCTAAGGGTGAACCTCTTC+AGG | 0.319731 | 8.2:+29586771 | MS.gene017631:CDS |
| CCTCCACCTCCTCCGCTACT+AGG | 0.388469 | 8.2:-29587123 | None:intergenic |
| ACCGGTGACATCAACGGCTT+TGG | 0.389735 | 8.2:-29586749 | None:intergenic |
| TATGGTGGAGGCGGCGGTCG+TGG | 0.391127 | 8.2:+29586808 | MS.gene017631:CDS |
| TGTTATACTTGTGGTGATAC+TGG | 0.397825 | 8.2:+29586871 | MS.gene017631:CDS |
| GTGTTGAGGCTTCTGGTTGA+TGG | 0.398672 | 8.2:+29587358 | MS.gene017631:CDS |
| GGTGGTGGCAATAGAAGATT+TGG | 0.399281 | 8.2:+29587258 | MS.gene017631:CDS |
| TTTGATGAATCCGAAGCCTT+TGG | 0.409445 | 8.2:-29586605 | None:intergenic |
| AATGAAGGAGGAAGGTTTGA+TGG | 0.418902 | 8.2:+29587198 | MS.gene017631:CDS |
| GGCGGCGGTCGTGGATTTAG+AGG | 0.428537 | 8.2:+29586817 | MS.gene017631:CDS |
| TGCTACAGGTGTGGTGGGGT+TGG | 0.430495 | 8.2:+29587075 | MS.gene017631:CDS |
| GTGAGGTGGGTCACATTGCT+AGG | 0.431855 | 8.2:+29587166 | MS.gene017631:CDS |
| CGTTGATGTCACCGGTCCTA+AGG | 0.435362 | 8.2:+29586756 | MS.gene017631:CDS |
| TTCAACAACACCAAAGGCTT+CGG | 0.440293 | 8.2:+29586595 | MS.gene017631:CDS |
| TTGCTACAAGTGCGGTGAGG+TGG | 0.441683 | 8.2:+29587152 | MS.gene017631:CDS |
| AGAAGGAACGGTGGTGGTGG+TGG | 0.446028 | 8.2:+29586847 | MS.gene017631:CDS |
| CATCTTGCTACAGGTGTGGT+GGG | 0.457817 | 8.2:+29587070 | MS.gene017631:CDS |
| TGCTTTAACTGTGGGAAGGC+AGG | 0.462177 | 8.2:+29587318 | MS.gene017631:CDS |
| GAGAGAAGGAACGGTGGTGG+TGG | 0.470011 | 8.2:+29586844 | MS.gene017631:CDS |
| GGCGGTCGCGATGGAGGAAA+GGG | 0.470963 | 8.2:+29587291 | MS.gene017631:CDS |
| GGTGGTGGTGGCGGTCGCGA+TGG | 0.471463 | 8.2:+29587282 | MS.gene017631:CDS |
| GAGATCTTCGCTATCGTCAT+CGG | 0.473073 | 8.2:-29586629 | None:intergenic |
| GATCGCTCTGGTGGTGGTGG+TGG | 0.473309 | 8.2:+29586940 | MS.gene017631:CDS |
| GATGGCAATGGAAGGTTTGG+TGG | 0.475514 | 8.2:+29587240 | MS.gene017631:CDS |
| AGATCTTCGCTATCGTCATC+GGG | 0.477231 | 8.2:-29586628 | None:intergenic |
| TGCTACAAGTGCGGTGAGGT+GGG | 0.479596 | 8.2:+29587153 | MS.gene017631:CDS |
| GATGATGGCAATGGAAGGTT+TGG | 0.485258 | 8.2:+29587237 | MS.gene017631:CDS |
| GGAAGGTTTGATGGTGGCAA+TGG | 0.488255 | 8.2:+29587207 | MS.gene017631:CDS |
| AGAAGATTTGGTGGTGGTGG+TGG | 0.493233 | 8.2:+29587270 | MS.gene017631:CDS |
| GCTAGGGATTGCAGCAATGA+AGG | 0.495094 | 8.2:+29587183 | MS.gene017631:CDS |
| ACCTGAAGAGGTTCACCCTT+AGG | 0.495108 | 8.2:-29586772 | None:intergenic |
| TGGCGGTCGCGATGGAGGAA+AGG | 0.495347 | 8.2:+29587290 | MS.gene017631:CDS |
| GTGATACTGGTCACATCGCT+AGG | 0.498797 | 8.2:+29586884 | MS.gene017631:CDS |
| GGTGGTGGCGGTCGCGATGG+AGG | 0.501013 | 8.2:+29587285 | MS.gene017631:CDS |
| GATAACTATGGTGGAGGCGG+CGG | 0.501060 | 8.2:+29586802 | MS.gene017631:CDS |
| ACATCTTGCTACAGGTGTGG+TGG | 0.503337 | 8.2:+29587069 | MS.gene017631:CDS |
| ATCGTTCTGATCGGAATGAT+AGG | 0.517737 | 8.2:+29586914 | MS.gene017631:CDS |
| AGGGTGAACCTCTTCAGGTT+AGG | 0.518271 | 8.2:+29586776 | MS.gene017631:CDS |
| GTGGAGGCACATCTTGCTAC+AGG | 0.518304 | 8.2:+29587061 | MS.gene017631:CDS |
| ACAATCGCCGACGGCGATAA+CGG | 0.522807 | 8.2:+29586721 | MS.gene017631:CDS |
| AATAGAAGATTTGGTGGTGG+TGG | 0.523689 | 8.2:+29587267 | MS.gene017631:CDS |
| AGTAGCGGAGGAGGTGGAGG+CGG | 0.525117 | 8.2:+29587126 | MS.gene017631:CDS |
| AACAACAACAACGGTGGCGG+TGG | 0.527907 | 8.2:+29587033 | MS.gene017631:CDS |
| TGAACCTCTTCAGGTTAGGC+AGG | 0.528588 | 8.2:+29586780 | MS.gene017631:CDS |
| GGTGAGAGAAGGAACGGTGG+TGG | 0.532764 | 8.2:+29586841 | MS.gene017631:CDS |
| AATGATCGCTCTGGTGGTGG+TGG | 0.533030 | 8.2:+29586937 | MS.gene017631:CDS |
| TTTGCTAGGGATTGCATGCG+TGG | 0.536617 | 8.2:+29587006 | MS.gene017631:CDS |
| CCTAGTAGCGGAGGAGGTGG+AGG | 0.539867 | 8.2:+29587123 | MS.gene017631:CDS |
| GGTTTGATGGTGGCAATGGA+AGG | 0.540936 | 8.2:+29587211 | MS.gene017631:CDS |
| CAGGTTAGGCAGGATAACTA+TGG | 0.541696 | 8.2:+29586790 | MS.gene017631:CDS |
| CAATCTGACATCAGATCTGA+AGG | 0.544978 | 8.2:+29586661 | MS.gene017631:CDS |
| ACCAAAGCCGTTGATGTCAC+CGG | 0.545847 | 8.2:+29586748 | MS.gene017631:CDS |
| GAATCAGCGGCGTGGTGCAA+TGG | 0.549203 | 8.2:+29586572 | MS.gene017631:CDS |
| GACCGTGCTTGCTATACTTG+TGG | 0.551573 | 8.2:+29586970 | MS.gene017631:CDS |
| CAGGATAACTATGGTGGAGG+CGG | 0.552223 | 8.2:+29586799 | MS.gene017631:CDS |
| TTATCCTGCCTAACCTGAAG+AGG | 0.553752 | 8.2:-29586784 | None:intergenic |
| AACGGTGGCGGTGGATATGG+TGG | 0.558225 | 8.2:+29587042 | MS.gene017631:CDS |
| AGAGGTGGTGAGAGAAGGAA+CGG | 0.569558 | 8.2:+29586835 | MS.gene017631:CDS |
| GATTTAGAGGTGGTGAGAGA+AGG | 0.570831 | 8.2:+29586830 | MS.gene017631:CDS |
| GGTGGTGGTTGTTATACTTG+TGG | 0.572889 | 8.2:+29586862 | MS.gene017631:CDS |
| AGGAATGATCGCTCTGGTGG+TGG | 0.574103 | 8.2:+29586934 | MS.gene017631:CDS |
| GGTGGCAATAGAAGATTTGG+TGG | 0.577491 | 8.2:+29587261 | MS.gene017631:CDS |
| AAGGGCACATGCTTTAACTG+TGG | 0.580636 | 8.2:+29587309 | MS.gene017631:CDS |
| AATGATAGGAATGATCGCTC+TGG | 0.580640 | 8.2:+29586928 | MS.gene017631:CDS |
| ACTCCTAGTAGCGGAGGAGG+TGG | 0.581353 | 8.2:+29587120 | MS.gene017631:CDS |
| GTTGATGTCACCGGTCCTAA+GGG | 0.586474 | 8.2:+29586757 | MS.gene017631:CDS |
| AAGAGGTTCACCCTTAGGAC+CGG | 0.590248 | 8.2:-29586767 | None:intergenic |
| AGGGCACATGCTTTAACTGT+GGG | 0.595542 | 8.2:+29587310 | MS.gene017631:CDS |
| GGCAATAGAAGATTTGGTGG+TGG | 0.596443 | 8.2:+29587264 | MS.gene017631:CDS |
| GTCGAGTTCACAATCGCCGA+CGG | 0.599723 | 8.2:+29586712 | MS.gene017631:CDS |
| TGAGGTGGGTCACATTGCTA+GGG | 0.600577 | 8.2:+29587167 | MS.gene017631:CDS |
| GGCAATGGAAGGTTTGGTGG+TGG | 0.602525 | 8.2:+29587243 | MS.gene017631:CDS |
| ATTGCAGCAATGAAGGAGGA+AGG | 0.604316 | 8.2:+29587190 | MS.gene017631:CDS |
| GGGATTGTGATCGTTCTGAT+CGG | 0.604854 | 8.2:+29586905 | MS.gene017631:CDS |
| AACCACAAGTATAGCAAGCA+CGG | 0.605269 | 8.2:-29586972 | None:intergenic |
| ATCTTGCTACAGGTGTGGTG+GGG | 0.605984 | 8.2:+29587071 | MS.gene017631:CDS |
| CTTAGGACCGGTGACATCAA+CGG | 0.607581 | 8.2:-29586755 | None:intergenic |
| GGAAGGTATGATGATGGCAA+TGG | 0.610842 | 8.2:+29587228 | MS.gene017631:CDS |
| GGTGGCGGTGGATATGGTGG+AGG | 0.611131 | 8.2:+29587045 | MS.gene017631:CDS |
| AAGTATAGCAAGCACGGTCA+CGG | 0.614873 | 8.2:-29586966 | None:intergenic |
| GCTACTCCTAGTAGCGGAGG+AGG | 0.616706 | 8.2:+29587117 | MS.gene017631:CDS |
| CACATGCTTTAACTGTGGGA+AGG | 0.620078 | 8.2:+29587314 | MS.gene017631:CDS |
| CGCTTGCTACAAGTGCGGTG+AGG | 0.620901 | 8.2:+29587149 | MS.gene017631:CDS |
| GGTAACAACAACAACGGTGG+CGG | 0.621033 | 8.2:+29587030 | MS.gene017631:CDS |
| GGTATGATGATGGCAATGGA+AGG | 0.623747 | 8.2:+29587232 | MS.gene017631:CDS |
| GGCAATGGAAGGTATGATGA+TGG | 0.625626 | 8.2:+29587222 | MS.gene017631:CDS |
| GTTAGGCAGGATAACTATGG+TGG | 0.630912 | 8.2:+29586793 | MS.gene017631:CDS |
| TGCGCTACTCCTAGTAGCGG+AGG | 0.632546 | 8.2:+29587114 | MS.gene017631:CDS |
| AGGCAGGATAACTATGGTGG+AGG | 0.633369 | 8.2:+29586796 | MS.gene017631:CDS |
| GGCGGTCGTGGATTTAGAGG+TGG | 0.635145 | 8.2:+29586820 | MS.gene017631:CDS |
| GGCACATCTTGCTACAGGTG+TGG | 0.637876 | 8.2:+29587066 | MS.gene017631:CDS |
| CAATGGTTCAACAACACCAA+AGG | 0.639643 | 8.2:+29586589 | MS.gene017631:CDS |
| GGCGGCGCTTGCTACAAGTG+CGG | 0.643268 | 8.2:+29587144 | MS.gene017631:CDS |
| AGGGATTGCAGCAATGAAGG+AGG | 0.643394 | 8.2:+29587186 | MS.gene017631:CDS |
| TGATACTGGTCACATCGCTA+GGG | 0.645119 | 8.2:+29586885 | MS.gene017631:CDS |
| GCTAGGGATTGCATGCGTGG+AGG | 0.656728 | 8.2:+29587009 | MS.gene017631:CDS |
| GGTGGTGAGAGAAGGAACGG+TGG | 0.661941 | 8.2:+29586838 | MS.gene017631:CDS |
| GATTGCGCTACTCCTAGTAG+CGG | 0.671173 | 8.2:+29587111 | MS.gene017631:CDS |
| GATAGGAATGATCGCTCTGG+TGG | 0.671256 | 8.2:+29586931 | MS.gene017631:CDS |
| GAAGGAGGAAGGTTTGATGG+TGG | 0.685560 | 8.2:+29587201 | MS.gene017631:CDS |
| GGAGGAGAGAATCAGCGGCG+TGG | 0.687679 | 8.2:+29586564 | MS.gene017631:CDS |
| ATGGCGGAGGAGAGAATCAG+CGG | 0.694395 | 8.2:+29586559 | MS.gene017631:CDS |
| CGTGGAGGTAACAACAACAA+CGG | 0.709705 | 8.2:+29587024 | MS.gene017631:CDS |
| GGAGGTAACAACAACAACGG+TGG | 0.733946 | 8.2:+29587027 | MS.gene017631:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCTTTTGAACATTTTGCTA+GGG | + | chr8.2:29586993-29587012 | MS.gene017631:CDS | 25.0% |
| ! | GTTCTTTTGAACATTTTGCT+AGG | + | chr8.2:29586992-29587011 | MS.gene017631:CDS | 30.0% |
| TGTTATACTTGTGGTGATAC+TGG | + | chr8.2:29586871-29586890 | MS.gene017631:CDS | 35.0% | |
| AACCACAAGTATAGCAAGCA+CGG | - | chr8.2:29586975-29586994 | None:intergenic | 40.0% | |
| AATGAAGGAGGAAGGTTTGA+TGG | + | chr8.2:29587198-29587217 | MS.gene017631:CDS | 40.0% | |
| AATGATAGGAATGATCGCTC+TGG | + | chr8.2:29586928-29586947 | MS.gene017631:CDS | 40.0% | |
| ATCGTTCTGATCGGAATGAT+AGG | + | chr8.2:29586914-29586933 | MS.gene017631:CDS | 40.0% | |
| CAATCTGACATCAGATCTGA+AGG | + | chr8.2:29586661-29586680 | MS.gene017631:CDS | 40.0% | |
| CAATGGTTCAACAACACCAA+AGG | + | chr8.2:29586589-29586608 | MS.gene017631:CDS | 40.0% | |
| TTCAACAACACCAAAGGCTT+CGG | + | chr8.2:29586595-29586614 | MS.gene017631:CDS | 40.0% | |
| TTTGATGAATCCGAAGCCTT+TGG | - | chr8.2:29586608-29586627 | None:intergenic | 40.0% | |
| ! | TTTTGCAAGGGATTGTGTTG+AGG | + | chr8.2:29587344-29587363 | MS.gene017631:CDS | 40.0% |
| !! | AATAGAAGATTTGGTGGTGG+TGG | + | chr8.2:29587267-29587286 | MS.gene017631:CDS | 40.0% |
| AAGTATAGCAAGCACGGTCA+CGG | - | chr8.2:29586969-29586988 | None:intergenic | 45.0% | |
| AGATCTTCGCTATCGTCATC+GGG | - | chr8.2:29586631-29586650 | None:intergenic | 45.0% | |
| AGGGCACATGCTTTAACTGT+GGG | + | chr8.2:29587310-29587329 | MS.gene017631:CDS | 45.0% | |
| ATTGCAGCAATGAAGGAGGA+AGG | + | chr8.2:29587190-29587209 | MS.gene017631:CDS | 45.0% | |
| CACATGCTTTAACTGTGGGA+AGG | + | chr8.2:29587314-29587333 | MS.gene017631:CDS | 45.0% | |
| CAGGTTAGGCAGGATAACTA+TGG | + | chr8.2:29586790-29586809 | MS.gene017631:CDS | 45.0% | |
| CGTGGAGGTAACAACAACAA+CGG | + | chr8.2:29587024-29587043 | MS.gene017631:CDS | 45.0% | |
| GAGATCTTCGCTATCGTCAT+CGG | - | chr8.2:29586632-29586651 | None:intergenic | 45.0% | |
| GATTTAGAGGTGGTGAGAGA+AGG | + | chr8.2:29586830-29586849 | MS.gene017631:CDS | 45.0% | |
| GGGATTGTGATCGTTCTGAT+CGG | + | chr8.2:29586905-29586924 | MS.gene017631:CDS | 45.0% | |
| GGTGGCAATAGAAGATTTGG+TGG | + | chr8.2:29587261-29587280 | MS.gene017631:CDS | 45.0% | |
| GTTAGGCAGGATAACTATGG+TGG | + | chr8.2:29586793-29586812 | MS.gene017631:CDS | 45.0% | |
| TGATACTGGTCACATCGCTA+GGG | + | chr8.2:29586885-29586904 | MS.gene017631:CDS | 45.0% | |
| TTATCCTGCCTAACCTGAAG+AGG | - | chr8.2:29586787-29586806 | None:intergenic | 45.0% | |
| ! | AAGGGCACATGCTTTAACTG+TGG | + | chr8.2:29587309-29587328 | MS.gene017631:CDS | 45.0% |
| ! | GAAGGCAGGACATTTTGCAA+GGG | + | chr8.2:29587332-29587351 | MS.gene017631:CDS | 45.0% |
| ! | GATGATGGCAATGGAAGGTT+TGG | + | chr8.2:29587237-29587256 | MS.gene017631:CDS | 45.0% |
| ! | GGATTTCGCTCTCTTTTCGA+AGG | + | chr8.2:29586682-29586701 | MS.gene017631:CDS | 45.0% |
| ! | GGCAATGGAAGGTATGATGA+TGG | + | chr8.2:29587222-29587241 | MS.gene017631:CDS | 45.0% |
| ! | GGTGGTGGCAATAGAAGATT+TGG | + | chr8.2:29587258-29587277 | MS.gene017631:CDS | 45.0% |
| ! | GGTGGTGGTTGTTATACTTG+TGG | + | chr8.2:29586862-29586881 | MS.gene017631:CDS | 45.0% |
| !! | GGAAGGTATGATGATGGCAA+TGG | + | chr8.2:29587228-29587247 | MS.gene017631:CDS | 45.0% |
| !! | GGCAATAGAAGATTTGGTGG+TGG | + | chr8.2:29587264-29587283 | MS.gene017631:CDS | 45.0% |
| !! | GGTATGATGATGGCAATGGA+AGG | + | chr8.2:29587232-29587251 | MS.gene017631:CDS | 45.0% |
| AAGAGGTTCACCCTTAGGAC+CGG | - | chr8.2:29586770-29586789 | None:intergenic | 50.0% | |
| ACATCTTGCTACAGGTGTGG+TGG | + | chr8.2:29587069-29587088 | MS.gene017631:CDS | 50.0% | |
| ACCAAAGCCGTTGATGTCAC+CGG | + | chr8.2:29586748-29586767 | MS.gene017631:CDS | 50.0% | |
| ACCTGAAGAGGTTCACCCTT+AGG | - | chr8.2:29586775-29586794 | None:intergenic | 50.0% | |
| AGAGGTGGTGAGAGAAGGAA+CGG | + | chr8.2:29586835-29586854 | MS.gene017631:CDS | 50.0% | |
| AGGCAGGATAACTATGGTGG+AGG | + | chr8.2:29586796-29586815 | MS.gene017631:CDS | 50.0% | |
| AGGGATTGCAGCAATGAAGG+AGG | + | chr8.2:29587186-29587205 | MS.gene017631:CDS | 50.0% | |
| AGGGATTGTGTTGAGGCTTC+TGG | + | chr8.2:29587351-29587370 | MS.gene017631:CDS | 50.0% | |
| ATCTTGCTACAGGTGTGGTG+GGG | + | chr8.2:29587071-29587090 | MS.gene017631:CDS | 50.0% | |
| CATCTTGCTACAGGTGTGGT+GGG | + | chr8.2:29587070-29587089 | MS.gene017631:CDS | 50.0% | |
| CTTAGGACCGGTGACATCAA+CGG | - | chr8.2:29586758-29586777 | None:intergenic | 50.0% | |
| GAAGGAGGAAGGTTTGATGG+TGG | + | chr8.2:29587201-29587220 | MS.gene017631:CDS | 50.0% | |
| GATAGGAATGATCGCTCTGG+TGG | + | chr8.2:29586931-29586950 | MS.gene017631:CDS | 50.0% | |
| GATGGCAATGGAAGGTTTGG+TGG | + | chr8.2:29587240-29587259 | MS.gene017631:CDS | 50.0% | |
| GATTGCGCTACTCCTAGTAG+CGG | + | chr8.2:29587111-29587130 | MS.gene017631:CDS | 50.0% | |
| GCTAGGGATTGCAGCAATGA+AGG | + | chr8.2:29587183-29587202 | MS.gene017631:CDS | 50.0% | |
| GGAGGTAACAACAACAACGG+TGG | + | chr8.2:29587027-29587046 | MS.gene017631:CDS | 50.0% | |
| GGTAACAACAACAACGGTGG+CGG | + | chr8.2:29587030-29587049 | MS.gene017631:CDS | 50.0% | |
| GTGATACTGGTCACATCGCT+AGG | + | chr8.2:29586884-29586903 | MS.gene017631:CDS | 50.0% | |
| GTTGATGTCACCGGTCCTAA+GGG | + | chr8.2:29586757-29586776 | MS.gene017631:CDS | 50.0% | |
| TCCTAAGGGTGAACCTCTTC+AGG | + | chr8.2:29586771-29586790 | MS.gene017631:CDS | 50.0% | |
| TGAGGTGGGTCACATTGCTA+GGG | + | chr8.2:29587167-29587186 | MS.gene017631:CDS | 50.0% | |
| TGCTTTAACTGTGGGAAGGC+AGG | + | chr8.2:29587318-29587337 | MS.gene017631:CDS | 50.0% | |
| TTTGCTAGGGATTGCATGCG+TGG | + | chr8.2:29587006-29587025 | MS.gene017631:CDS | 50.0% | |
| ! | AGGGTGAACCTCTTCAGGTT+AGG | + | chr8.2:29586776-29586795 | MS.gene017631:CDS | 50.0% |
| ! | CAGGATAACTATGGTGGAGG+CGG | + | chr8.2:29586799-29586818 | MS.gene017631:CDS | 50.0% |
| ! | GGAAGGCAGGACATTTTGCA+AGG | + | chr8.2:29587331-29587350 | MS.gene017631:CDS | 50.0% |
| ! | TGAACCTCTTCAGGTTAGGC+AGG | + | chr8.2:29586780-29586799 | MS.gene017631:CDS | 50.0% |
| !! | AGAAGATTTGGTGGTGGTGG+TGG | + | chr8.2:29587270-29587289 | MS.gene017631:CDS | 50.0% |
| !! | GACCGTGCTTGCTATACTTG+TGG | + | chr8.2:29586970-29586989 | MS.gene017631:CDS | 50.0% |
| !! | GGAAGGTTTGATGGTGGCAA+TGG | + | chr8.2:29587207-29587226 | MS.gene017631:CDS | 50.0% |
| !! | GGTTTGATGGTGGCAATGGA+AGG | + | chr8.2:29587211-29587230 | MS.gene017631:CDS | 50.0% |
| ACAATCGCCGACGGCGATAA+CGG | + | chr8.2:29586721-29586740 | MS.gene017631:CDS | 55.0% | |
| ACCGGTGACATCAACGGCTT+TGG | - | chr8.2:29586752-29586771 | None:intergenic | 55.0% | |
| AGGAATGATCGCTCTGGTGG+TGG | + | chr8.2:29586934-29586953 | MS.gene017631:CDS | 55.0% | |
| CGTTGATGTCACCGGTCCTA+AGG | + | chr8.2:29586756-29586775 | MS.gene017631:CDS | 55.0% | |
| GGCACATCTTGCTACAGGTG+TGG | + | chr8.2:29587066-29587085 | MS.gene017631:CDS | 55.0% | |
| GTCGAGTTCACAATCGCCGA+CGG | + | chr8.2:29586712-29586731 | MS.gene017631:CDS | 55.0% | |
| GTGAGGTGGGTCACATTGCT+AGG | + | chr8.2:29587166-29587185 | MS.gene017631:CDS | 55.0% | |
| TGCTACAAGTGCGGTGAGGT+GGG | + | chr8.2:29587153-29587172 | MS.gene017631:CDS | 55.0% | |
| TTGCTACAAGTGCGGTGAGG+TGG | + | chr8.2:29587152-29587171 | MS.gene017631:CDS | 55.0% | |
| ! | AACAACAACAACGGTGGCGG+TGG | + | chr8.2:29587033-29587052 | MS.gene017631:CDS | 55.0% |
| ! | AACAACGGTGGCGGTGGATA+TGG | + | chr8.2:29587039-29587058 | MS.gene017631:CDS | 55.0% |
| ! | ATGGCGGAGGAGAGAATCAG+CGG | + | chr8.2:29586559-29586578 | MS.gene017631:CDS | 55.0% |
| ! | GATAACTATGGTGGAGGCGG+CGG | + | chr8.2:29586802-29586821 | MS.gene017631:CDS | 55.0% |
| ! | GGTTTTGCCGTTATCGCCGT+CGG | - | chr8.2:29586731-29586750 | None:intergenic | 55.0% |
| ! | GTGGAGGCACATCTTGCTAC+AGG | + | chr8.2:29587061-29587080 | MS.gene017631:CDS | 55.0% |
| !! | AATGATCGCTCTGGTGGTGG+TGG | + | chr8.2:29586937-29586956 | MS.gene017631:CDS | 55.0% |
| !! | AGATTTGGTGGTGGTGGTGG+CGG | + | chr8.2:29587273-29587292 | MS.gene017631:CDS | 55.0% |
| !! | GGCAATGGAAGGTTTGGTGG+TGG | + | chr8.2:29587243-29587262 | MS.gene017631:CDS | 55.0% |
| GAATCAGCGGCGTGGTGCAA+TGG | + | chr8.2:29586572-29586591 | MS.gene017631:CDS | 60.0% | |
| GCTAGGGATTGCATGCGTGG+AGG | + | chr8.2:29587009-29587028 | MS.gene017631:CDS | 60.0% | |
| GGCGGTCGTGGATTTAGAGG+TGG | + | chr8.2:29586820-29586839 | MS.gene017631:CDS | 60.0% | |
| GGTGAGAGAAGGAACGGTGG+TGG | + | chr8.2:29586841-29586860 | MS.gene017631:CDS | 60.0% | |
| GGTGGTGAGAGAAGGAACGG+TGG | + | chr8.2:29586838-29586857 | MS.gene017631:CDS | 60.0% | |
| TGCGCTACTCCTAGTAGCGG+AGG | + | chr8.2:29587114-29587133 | MS.gene017631:CDS | 60.0% | |
| ! | AACGGTGGCGGTGGATATGG+TGG | + | chr8.2:29587042-29587061 | MS.gene017631:CDS | 60.0% |
| ! | ACTCCTAGTAGCGGAGGAGG+TGG | + | chr8.2:29587120-29587139 | MS.gene017631:CDS | 60.0% |
| ! | CGCTTGCTACAAGTGCGGTG+AGG | + | chr8.2:29587149-29587168 | MS.gene017631:CDS | 60.0% |
| ! | GAGAGAAGGAACGGTGGTGG+TGG | + | chr8.2:29586844-29586863 | MS.gene017631:CDS | 60.0% |
| ! | GCTACTCCTAGTAGCGGAGG+AGG | + | chr8.2:29587117-29587136 | MS.gene017631:CDS | 60.0% |
| ! | TGCTACAGGTGTGGTGGGGT+TGG | + | chr8.2:29587075-29587094 | MS.gene017631:CDS | 60.0% |
| !! | AGAAGGAACGGTGGTGGTGG+TGG | + | chr8.2:29586847-29586866 | MS.gene017631:CDS | 60.0% |
| CCTCCACCTCCTCCGCTACT+AGG | - | chr8.2:29587126-29587145 | None:intergenic | 65.0% | |
| GGAGGAGAGAATCAGCGGCG+TGG | + | chr8.2:29586564-29586583 | MS.gene017631:CDS | 65.0% | |
| GGCGGCGGTCGTGGATTTAG+AGG | + | chr8.2:29586817-29586836 | MS.gene017631:CDS | 65.0% | |
| GGCGGTCGCGATGGAGGAAA+GGG | + | chr8.2:29587291-29587310 | MS.gene017631:CDS | 65.0% | |
| TGGCGGTCGCGATGGAGGAA+AGG | + | chr8.2:29587290-29587309 | MS.gene017631:CDS | 65.0% | |
| ! | AGTAGCGGAGGAGGTGGAGG+CGG | + | chr8.2:29587126-29587145 | MS.gene017631:CDS | 65.0% |
| ! | CCTAGTAGCGGAGGAGGTGG+AGG | + | chr8.2:29587123-29587142 | MS.gene017631:CDS | 65.0% |
| ! | GGCGGCGCTTGCTACAAGTG+CGG | + | chr8.2:29587144-29587163 | MS.gene017631:CDS | 65.0% |
| ! | GGTGGCGGTGGATATGGTGG+AGG | + | chr8.2:29587045-29587064 | MS.gene017631:CDS | 65.0% |
| !! | GATCGCTCTGGTGGTGGTGG+TGG | + | chr8.2:29586940-29586959 | MS.gene017631:CDS | 65.0% |
| ! | TATGGTGGAGGCGGCGGTCG+TGG | + | chr8.2:29586808-29586827 | MS.gene017631:CDS | 70.0% |
| !! | GGTGGTGGCGGTCGCGATGG+AGG | + | chr8.2:29587285-29587304 | MS.gene017631:CDS | 75.0% |
| !! | GGTGGTGGTGGCGGTCGCGA+TGG | + | chr8.2:29587282-29587301 | MS.gene017631:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 29586559 | 29587377 | 29586559 | ID=MS.gene017631 |
| chr8.2 | mRNA | 29586559 | 29587377 | 29586559 | ID=MS.gene017631.t1;Parent=MS.gene017631 |
| chr8.2 | exon | 29586559 | 29587377 | 29586559 | ID=MS.gene017631.t1.exon1;Parent=MS.gene017631.t1 |
| chr8.2 | CDS | 29586559 | 29587377 | 29586559 | ID=cds.MS.gene017631.t1;Parent=MS.gene017631.t1 |
| Gene Sequence |
| Protein sequence |
