Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28445.t1 | XP_013446856.1 | 99.3 | 299 | 2 | 0 | 1 | 299 | 1 | 299 | 1.40E-115 | 426 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28445.t1 | Q5BLX8 | 51.4 | 294 | 142 | 1 | 5 | 298 | 12 | 304 | 4.8e-35 | 149.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28445.t1 | A0A072TVL0 | 99.3 | 299 | 2 | 0 | 1 | 299 | 1 | 299 | 1.0e-115 | 426.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene28445 | MS.gene44240 | PPI |
| MS.gene39977 | MS.gene28445 | PPI |
| MS.gene28445 | MS.gene32044 | PPI |
| MS.gene28445 | MS.gene004666 | PPI |
| MS.gene012116 | MS.gene28445 | PPI |
| MS.gene35517 | MS.gene28445 | PPI |
| MS.gene036217 | MS.gene28445 | PPI |
| MS.gene035327 | MS.gene28445 | PPI |
| MS.gene041553 | MS.gene28445 | PPI |
| MS.gene28445 | MS.gene89663 | PPI |
| MS.gene036493 | MS.gene28445 | PPI |
| MS.gene28445 | MS.gene034371 | PPI |
| MS.gene28445 | MS.gene017631 | PPI |
| MS.gene28445 | MS.gene059292 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28445.t1 | MTR_8g092620 | 99.331 | 299 | 2 | 0 | 1 | 299 | 1 | 299 | 0.0 | 612 |
| MS.gene28445.t1 | MTR_8g092620 | 99.322 | 295 | 2 | 0 | 1 | 295 | 8 | 302 | 0.0 | 602 |
| MS.gene28445.t1 | MTR_8g092620 | 100.000 | 213 | 0 | 0 | 1 | 213 | 1 | 213 | 3.93e-157 | 437 |
| MS.gene28445.t1 | MTR_4g119620 | 30.844 | 308 | 194 | 6 | 7 | 297 | 16 | 321 | 3.09e-48 | 164 |
| MS.gene28445.t1 | MTR_1g072140 | 29.097 | 299 | 202 | 5 | 7 | 297 | 16 | 312 | 2.12e-43 | 151 |
| MS.gene28445.t1 | MTR_1g072140 | 29.825 | 114 | 78 | 1 | 185 | 298 | 28 | 139 | 2.47e-11 | 63.9 |
| MS.gene28445.t1 | MTR_4g104380 | 27.055 | 292 | 201 | 6 | 14 | 297 | 226 | 513 | 7.23e-32 | 124 |
| MS.gene28445.t1 | MTR_3g075400 | 27.336 | 289 | 204 | 4 | 14 | 297 | 221 | 508 | 8.21e-30 | 118 |
| MS.gene28445.t1 | MTR_7g086360 | 26.756 | 299 | 200 | 7 | 10 | 294 | 47 | 340 | 4.02e-27 | 108 |
| MS.gene28445.t1 | MTR_7g086360 | 23.585 | 212 | 145 | 5 | 95 | 297 | 48 | 251 | 7.54e-12 | 65.5 |
| MS.gene28445.t1 | MTR_4g102520 | 27.362 | 307 | 204 | 10 | 6 | 297 | 282 | 584 | 2.22e-24 | 103 |
| MS.gene28445.t1 | MTR_4g102520 | 24.074 | 216 | 151 | 8 | 93 | 299 | 285 | 496 | 2.43e-11 | 64.7 |
| MS.gene28445.t1 | MTR_5g090420 | 23.906 | 297 | 221 | 5 | 6 | 297 | 252 | 548 | 2.92e-24 | 102 |
| MS.gene28445.t1 | MTR_3g449990 | 22.819 | 298 | 224 | 5 | 6 | 297 | 258 | 555 | 2.30e-22 | 97.4 |
| MS.gene28445.t1 | MTR_1g069345 | 26.246 | 301 | 212 | 8 | 6 | 297 | 204 | 503 | 1.60e-21 | 94.7 |
| MS.gene28445.t1 | MTR_2g436510 | 23.203 | 306 | 214 | 7 | 7 | 298 | 159 | 457 | 4.08e-21 | 93.2 |
| MS.gene28445.t1 | MTR_3g106080 | 25.941 | 239 | 168 | 4 | 8 | 239 | 409 | 645 | 2.51e-20 | 91.7 |
| MS.gene28445.t1 | MTR_3g106080 | 21.695 | 295 | 211 | 5 | 6 | 297 | 337 | 614 | 1.94e-13 | 70.9 |
| MS.gene28445.t1 | MTR_4g071130 | 26.087 | 276 | 183 | 7 | 26 | 297 | 17 | 275 | 9.40e-19 | 87.0 |
| MS.gene28445.t1 | MTR_4g071130 | 23.132 | 281 | 197 | 6 | 17 | 294 | 50 | 314 | 1.31e-13 | 71.6 |
| MS.gene28445.t1 | MTR_1g090827 | 24.638 | 276 | 187 | 6 | 26 | 297 | 17 | 275 | 1.09e-16 | 80.9 |
| MS.gene28445.t1 | MTR_1g090827 | 22.887 | 284 | 194 | 7 | 17 | 294 | 50 | 314 | 1.73e-12 | 68.2 |
| MS.gene28445.t1 | MTR_2g054920 | 25.725 | 276 | 194 | 8 | 29 | 299 | 30 | 299 | 2.26e-16 | 79.0 |
| MS.gene28445.t1 | MTR_1g072740 | 29.018 | 224 | 146 | 8 | 6 | 220 | 281 | 500 | 2.36e-16 | 79.7 |
| MS.gene28445.t1 | MTR_1g072740 | 24.074 | 216 | 151 | 8 | 93 | 299 | 284 | 495 | 4.37e-11 | 63.5 |
| MS.gene28445.t1 | MTR_1g097140 | 23.179 | 302 | 193 | 8 | 14 | 296 | 119 | 400 | 5.28e-16 | 78.2 |
| MS.gene28445.t1 | MTR_2g012630 | 24.514 | 257 | 169 | 6 | 49 | 292 | 4 | 248 | 6.75e-16 | 78.6 |
| MS.gene28445.t1 | MTR_2g012630 | 23.697 | 211 | 152 | 5 | 92 | 297 | 5 | 211 | 1.01e-13 | 72.0 |
| MS.gene28445.t1 | MTR_2g012630 | 25.600 | 125 | 93 | 0 | 9 | 133 | 91 | 215 | 5.83e-13 | 69.7 |
| MS.gene28445.t1 | MTR_2g012630 | 24.514 | 257 | 169 | 6 | 49 | 292 | 4 | 248 | 7.28e-16 | 78.6 |
| MS.gene28445.t1 | MTR_2g012630 | 23.697 | 211 | 152 | 5 | 92 | 297 | 5 | 211 | 1.05e-13 | 72.0 |
| MS.gene28445.t1 | MTR_2g012630 | 25.600 | 125 | 93 | 0 | 9 | 133 | 91 | 215 | 5.73e-13 | 69.7 |
| MS.gene28445.t1 | MTR_2g087640 | 22.082 | 317 | 207 | 9 | 13 | 296 | 5 | 314 | 1.54e-15 | 76.3 |
| MS.gene28445.t1 | MTR_4g095058 | 25.225 | 222 | 154 | 3 | 14 | 224 | 326 | 546 | 6.78e-15 | 75.1 |
| MS.gene28445.t1 | MTR_4g095058 | 25.225 | 222 | 154 | 3 | 14 | 224 | 324 | 544 | 7.09e-15 | 75.1 |
| MS.gene28445.t1 | MTR_6g004040 | 25.714 | 210 | 143 | 6 | 95 | 297 | 9 | 212 | 9.46e-15 | 75.1 |
| MS.gene28445.t1 | MTR_6g004040 | 20.472 | 254 | 160 | 3 | 33 | 286 | 32 | 243 | 8.82e-14 | 72.0 |
| MS.gene28445.t1 | MTR_6g004040 | 26.400 | 125 | 92 | 0 | 9 | 133 | 92 | 216 | 3.26e-13 | 70.5 |
| MS.gene28445.t1 | MTR_5g016370 | 24.545 | 220 | 154 | 3 | 17 | 225 | 346 | 564 | 1.04e-14 | 74.7 |
| MS.gene28445.t1 | MTR_5g016370 | 21.101 | 327 | 208 | 9 | 8 | 297 | 237 | 550 | 4.50e-12 | 66.6 |
| MS.gene28445.t1 | MTR_5g022690 | 24.878 | 205 | 147 | 3 | 11 | 210 | 272 | 474 | 1.11e-14 | 74.3 |
| MS.gene28445.t1 | MTR_5g022690 | 22.449 | 294 | 204 | 7 | 26 | 299 | 188 | 477 | 3.14e-11 | 63.9 |
| MS.gene28445.t1 | MTR_8g038550 | 23.448 | 290 | 172 | 8 | 13 | 297 | 220 | 464 | 2.04e-14 | 73.9 |
| MS.gene28445.t1 | MTR_5g016350 | 23.556 | 225 | 160 | 3 | 12 | 225 | 265 | 488 | 4.04e-14 | 72.8 |
| MS.gene28445.t1 | MTR_5g016350 | 23.661 | 224 | 159 | 3 | 13 | 225 | 330 | 552 | 5.50e-14 | 72.4 |
| MS.gene28445.t1 | MTR_7g076230 | 23.368 | 291 | 176 | 6 | 11 | 297 | 319 | 566 | 5.83e-14 | 72.8 |
| MS.gene28445.t1 | MTR_8g104010 | 22.648 | 287 | 193 | 10 | 11 | 277 | 850 | 1127 | 1.04e-13 | 72.0 |
| MS.gene28445.t1 | MTR_2g060520 | 21.472 | 326 | 224 | 10 | 2 | 298 | 110 | 432 | 1.15e-13 | 71.2 |
| MS.gene28445.t1 | MTR_8g106790 | 23.127 | 307 | 187 | 8 | 27 | 297 | 27 | 320 | 1.18e-13 | 70.5 |
| MS.gene28445.t1 | MTR_2g019400 | 19.557 | 271 | 171 | 6 | 39 | 298 | 19 | 253 | 1.51e-13 | 69.7 |
| MS.gene28445.t1 | MTR_6g005220 | 24.028 | 283 | 173 | 10 | 56 | 297 | 104 | 385 | 1.51e-13 | 71.2 |
| MS.gene28445.t1 | MTR_8g104010 | 22.648 | 287 | 193 | 10 | 11 | 277 | 487 | 764 | 1.84e-13 | 71.2 |
| MS.gene28445.t1 | MTR_8g104010 | 22.648 | 287 | 193 | 10 | 11 | 277 | 570 | 847 | 2.09e-13 | 70.9 |
| MS.gene28445.t1 | MTR_3g045130 | 21.168 | 274 | 171 | 6 | 26 | 297 | 280 | 510 | 3.88e-13 | 69.7 |
| MS.gene28445.t1 | MTR_3g045130 | 25.150 | 167 | 120 | 2 | 11 | 174 | 349 | 513 | 3.68e-11 | 63.9 |
| MS.gene28445.t1 | MTR_7g058440 | 21.631 | 282 | 210 | 7 | 21 | 298 | 501 | 775 | 5.00e-13 | 69.7 |
| MS.gene28445.t1 | MTR_7g058460 | 21.631 | 282 | 210 | 7 | 21 | 298 | 510 | 784 | 5.07e-13 | 69.7 |
| MS.gene28445.t1 | MTR_1g087120 | 27.083 | 144 | 101 | 2 | 9 | 149 | 317 | 459 | 5.79e-13 | 69.7 |
| MS.gene28445.t1 | MTR_3g052220 | 26.210 | 248 | 130 | 7 | 57 | 290 | 214 | 422 | 1.28e-12 | 68.2 |
| MS.gene28445.t1 | MTR_4g069090 | 25.597 | 293 | 194 | 12 | 14 | 297 | 14 | 291 | 2.76e-12 | 67.4 |
| MS.gene28445.t1 | MTR_3g116500 | 25.697 | 323 | 187 | 14 | 14 | 297 | 61 | 369 | 2.85e-12 | 67.0 |
| MS.gene28445.t1 | MTR_1g054300 | 19.820 | 333 | 206 | 10 | 16 | 297 | 159 | 481 | 5.37e-12 | 66.2 |
| MS.gene28445.t1 | MTR_8g467040 | 22.785 | 316 | 225 | 9 | 1 | 298 | 102 | 416 | 5.47e-12 | 66.2 |
| MS.gene28445.t1 | MTR_1g050340 | 20.678 | 295 | 219 | 8 | 10 | 298 | 501 | 786 | 6.43e-12 | 66.2 |
| MS.gene28445.t1 | MTR_1g050340 | 20.678 | 295 | 219 | 8 | 10 | 298 | 502 | 787 | 6.43e-12 | 66.2 |
| MS.gene28445.t1 | MTR_8g068320 | 22.260 | 292 | 193 | 7 | 1 | 271 | 15 | 293 | 1.00e-11 | 65.1 |
| MS.gene28445.t1 | MTR_8g068320 | 22.260 | 292 | 193 | 7 | 1 | 271 | 16 | 294 | 1.01e-11 | 65.1 |
| MS.gene28445.t1 | MTR_2g060520 | 21.382 | 304 | 207 | 10 | 24 | 298 | 12 | 312 | 1.21e-11 | 64.7 |
| MS.gene28445.t1 | MTR_2g034500 | 24.306 | 144 | 106 | 1 | 9 | 149 | 232 | 375 | 2.36e-11 | 65.1 |
| MS.gene28445.t1 | MTR_2g016690 | 22.680 | 291 | 205 | 9 | 25 | 299 | 15 | 301 | 9.37e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28445.t1 | AT5G64730 | 83.557 | 298 | 49 | 0 | 1 | 298 | 1 | 298 | 0.0 | 531 |
| MS.gene28445.t1 | AT3G49660 | 29.139 | 302 | 201 | 5 | 7 | 297 | 13 | 312 | 1.06e-44 | 154 |
| MS.gene28445.t1 | AT4G02730 | 30.233 | 301 | 199 | 6 | 7 | 298 | 32 | 330 | 1.88e-44 | 154 |
| MS.gene28445.t1 | AT5G50230 | 26.667 | 300 | 208 | 6 | 6 | 297 | 213 | 508 | 3.16e-31 | 122 |
| MS.gene28445.t1 | AT2G43770 | 27.759 | 299 | 197 | 7 | 10 | 294 | 45 | 338 | 3.33e-29 | 114 |
| MS.gene28445.t1 | AT1G10580 | 26.537 | 309 | 204 | 11 | 6 | 297 | 270 | 572 | 5.70e-25 | 105 |
| MS.gene28445.t1 | AT1G10580 | 24.074 | 216 | 151 | 8 | 93 | 299 | 273 | 484 | 9.11e-11 | 62.8 |
| MS.gene28445.t1 | AT4G15900 | 25.407 | 307 | 206 | 9 | 7 | 298 | 165 | 463 | 3.89e-23 | 99.4 |
| MS.gene28445.t1 | AT3G16650 | 26.059 | 307 | 203 | 8 | 7 | 298 | 159 | 456 | 9.87e-23 | 98.2 |
| MS.gene28445.t1 | AT5G25150 | 27.586 | 232 | 159 | 4 | 8 | 232 | 408 | 637 | 3.00e-22 | 97.1 |
| MS.gene28445.t1 | AT5G25150 | 27.586 | 232 | 159 | 4 | 8 | 232 | 408 | 637 | 3.43e-22 | 97.1 |
| MS.gene28445.t1 | AT5G43920 | 26.948 | 308 | 207 | 11 | 4 | 297 | 210 | 513 | 7.06e-22 | 95.9 |
| MS.gene28445.t1 | AT5G08560 | 24.333 | 300 | 217 | 6 | 6 | 297 | 262 | 559 | 9.32e-22 | 95.5 |
| MS.gene28445.t1 | AT5G08560 | 24.333 | 300 | 217 | 6 | 6 | 297 | 262 | 559 | 9.32e-22 | 95.5 |
| MS.gene28445.t1 | AT5G08560 | 24.333 | 300 | 217 | 6 | 6 | 297 | 262 | 559 | 9.32e-22 | 95.5 |
| MS.gene28445.t1 | AT2G21390 | 25.362 | 276 | 185 | 6 | 26 | 297 | 17 | 275 | 9.33e-19 | 87.0 |
| MS.gene28445.t1 | AT2G21390 | 23.675 | 283 | 193 | 6 | 17 | 294 | 50 | 314 | 3.05e-14 | 73.6 |
| MS.gene28445.t1 | AT5G23430 | 27.143 | 210 | 140 | 6 | 95 | 297 | 9 | 212 | 7.77e-18 | 84.3 |
| MS.gene28445.t1 | AT5G23430 | 26.400 | 125 | 92 | 0 | 9 | 133 | 92 | 216 | 3.27e-13 | 70.5 |
| MS.gene28445.t1 | AT5G23430 | 23.750 | 240 | 168 | 5 | 49 | 280 | 5 | 237 | 3.65e-13 | 70.1 |
| MS.gene28445.t1 | AT5G23430 | 27.143 | 210 | 140 | 6 | 95 | 297 | 9 | 212 | 7.77e-18 | 84.3 |
| MS.gene28445.t1 | AT5G23430 | 26.400 | 125 | 92 | 0 | 9 | 133 | 92 | 216 | 3.27e-13 | 70.5 |
| MS.gene28445.t1 | AT5G23430 | 23.750 | 240 | 168 | 5 | 49 | 280 | 5 | 237 | 3.65e-13 | 70.1 |
| MS.gene28445.t1 | AT5G23430 | 27.143 | 210 | 140 | 6 | 95 | 297 | 9 | 212 | 8.00e-18 | 84.3 |
| MS.gene28445.t1 | AT5G23430 | 26.400 | 125 | 92 | 0 | 9 | 133 | 92 | 216 | 3.59e-13 | 70.5 |
| MS.gene28445.t1 | AT5G23430 | 23.750 | 240 | 168 | 5 | 49 | 280 | 5 | 237 | 3.97e-13 | 70.1 |
| MS.gene28445.t1 | AT1G62020 | 25.000 | 276 | 186 | 6 | 26 | 297 | 17 | 275 | 8.91e-18 | 84.3 |
| MS.gene28445.t1 | AT1G62020 | 22.615 | 283 | 196 | 6 | 17 | 294 | 50 | 314 | 7.26e-13 | 69.3 |
| MS.gene28445.t1 | AT5G67320 | 23.894 | 226 | 160 | 3 | 11 | 225 | 358 | 582 | 3.62e-17 | 82.0 |
| MS.gene28445.t1 | AT5G67320 | 20.561 | 321 | 221 | 10 | 6 | 297 | 253 | 568 | 3.05e-12 | 67.4 |
| MS.gene28445.t1 | AT5G08390 | 26.190 | 210 | 142 | 6 | 95 | 297 | 9 | 212 | 4.74e-17 | 82.0 |
| MS.gene28445.t1 | AT5G08390 | 26.400 | 125 | 92 | 0 | 9 | 133 | 92 | 216 | 8.87e-14 | 72.0 |
| MS.gene28445.t1 | AT2G41500 | 24.549 | 277 | 200 | 6 | 26 | 297 | 263 | 535 | 2.16e-16 | 79.7 |
| MS.gene28445.t1 | AT2G41500 | 29.187 | 209 | 133 | 6 | 11 | 210 | 332 | 534 | 4.98e-16 | 78.6 |
| MS.gene28445.t1 | AT2G41500 | 24.549 | 277 | 200 | 6 | 26 | 297 | 263 | 535 | 2.16e-16 | 79.7 |
| MS.gene28445.t1 | AT2G41500 | 29.187 | 209 | 133 | 6 | 11 | 210 | 332 | 534 | 4.98e-16 | 78.6 |
| MS.gene28445.t1 | AT5G52820 | 21.662 | 337 | 199 | 12 | 15 | 298 | 148 | 472 | 2.68e-16 | 79.3 |
| MS.gene28445.t1 | AT5G52820 | 31.250 | 128 | 85 | 1 | 2 | 129 | 347 | 471 | 1.96e-12 | 67.8 |
| MS.gene28445.t1 | AT5G52820 | 21.053 | 323 | 180 | 9 | 12 | 297 | 103 | 387 | 1.31e-11 | 65.1 |
| MS.gene28445.t1 | AT1G49040 | 24.834 | 302 | 166 | 10 | 11 | 298 | 836 | 1090 | 5.05e-16 | 79.0 |
| MS.gene28445.t1 | AT1G11160 | 21.923 | 260 | 161 | 3 | 33 | 292 | 31 | 248 | 5.95e-16 | 78.6 |
| MS.gene28445.t1 | AT1G11160 | 25.600 | 125 | 93 | 0 | 9 | 133 | 91 | 215 | 1.16e-13 | 72.0 |
| MS.gene28445.t1 | AT1G11160 | 23.697 | 211 | 152 | 6 | 92 | 297 | 5 | 211 | 3.25e-13 | 70.5 |
| MS.gene28445.t1 | AT1G11160 | 21.923 | 260 | 161 | 3 | 33 | 292 | 31 | 248 | 6.09e-16 | 78.6 |
| MS.gene28445.t1 | AT1G11160 | 25.600 | 125 | 93 | 0 | 9 | 133 | 91 | 215 | 1.27e-13 | 71.6 |
| MS.gene28445.t1 | AT1G11160 | 23.697 | 211 | 152 | 6 | 92 | 297 | 5 | 211 | 4.00e-13 | 70.1 |
| MS.gene28445.t1 | AT1G11160 | 21.923 | 260 | 161 | 3 | 33 | 292 | 31 | 248 | 6.32e-16 | 78.6 |
| MS.gene28445.t1 | AT1G11160 | 25.600 | 125 | 93 | 0 | 9 | 133 | 91 | 215 | 1.41e-13 | 71.6 |
| MS.gene28445.t1 | AT1G11160 | 23.697 | 211 | 152 | 6 | 92 | 297 | 5 | 211 | 3.92e-13 | 70.1 |
| MS.gene28445.t1 | AT5G60940 | 22.840 | 324 | 219 | 10 | 2 | 298 | 15 | 334 | 9.98e-16 | 76.6 |
| MS.gene28445.t1 | AT1G48630 | 23.920 | 301 | 193 | 8 | 27 | 297 | 27 | 321 | 1.38e-15 | 76.3 |
| MS.gene28445.t1 | AT2G46290 | 24.286 | 280 | 172 | 9 | 13 | 286 | 32 | 277 | 1.41e-15 | 76.6 |
| MS.gene28445.t1 | AT5G60940 | 22.840 | 324 | 219 | 10 | 2 | 298 | 107 | 426 | 2.15e-15 | 76.6 |
| MS.gene28445.t1 | AT1G61210 | 24.125 | 257 | 179 | 6 | 49 | 297 | 4 | 252 | 2.50e-15 | 77.0 |
| MS.gene28445.t1 | AT1G61210 | 25.600 | 125 | 93 | 0 | 9 | 133 | 91 | 215 | 6.68e-14 | 72.4 |
| MS.gene28445.t1 | AT1G61210 | 24.125 | 257 | 179 | 6 | 49 | 297 | 4 | 252 | 6.85e-15 | 75.5 |
| MS.gene28445.t1 | AT1G61210 | 25.600 | 125 | 93 | 0 | 9 | 133 | 91 | 215 | 7.53e-14 | 72.4 |
| MS.gene28445.t1 | AT1G61210 | 24.125 | 257 | 179 | 6 | 49 | 297 | 4 | 252 | 7.18e-15 | 75.5 |
| MS.gene28445.t1 | AT1G61210 | 25.600 | 125 | 93 | 0 | 9 | 133 | 91 | 215 | 7.60e-14 | 72.4 |
| MS.gene28445.t1 | AT2G46280 | 26.000 | 250 | 148 | 7 | 13 | 257 | 5 | 222 | 1.59e-14 | 72.4 |
| MS.gene28445.t1 | AT3G18130 | 22.924 | 301 | 196 | 8 | 27 | 297 | 27 | 321 | 2.88e-14 | 72.4 |
| MS.gene28445.t1 | AT1G11160 | 23.445 | 209 | 118 | 3 | 84 | 292 | 40 | 206 | 3.30e-14 | 73.6 |
| MS.gene28445.t1 | AT1G11160 | 25.600 | 125 | 93 | 0 | 9 | 133 | 49 | 173 | 1.15e-13 | 72.0 |
| MS.gene28445.t1 | AT2G46280 | 26.000 | 250 | 148 | 7 | 13 | 257 | 5 | 222 | 7.93e-14 | 71.2 |
| MS.gene28445.t1 | AT2G46280 | 26.000 | 250 | 148 | 7 | 13 | 257 | 5 | 222 | 7.93e-14 | 71.2 |
| MS.gene28445.t1 | AT3G15610 | 25.000 | 284 | 202 | 8 | 21 | 299 | 22 | 299 | 1.82e-13 | 70.1 |
| MS.gene28445.t1 | AT5G54520 | 24.367 | 316 | 212 | 11 | 5 | 298 | 147 | 457 | 2.94e-13 | 70.1 |
| MS.gene28445.t1 | AT5G13480 | 22.222 | 288 | 178 | 5 | 13 | 297 | 171 | 415 | 3.05e-13 | 70.5 |
| MS.gene28445.t1 | AT1G18080 | 23.333 | 300 | 195 | 8 | 29 | 297 | 27 | 322 | 3.20e-13 | 69.3 |
| MS.gene28445.t1 | AT5G13480 | 22.222 | 288 | 178 | 5 | 13 | 297 | 148 | 392 | 4.04e-13 | 70.1 |
| MS.gene28445.t1 | AT5G13480 | 22.222 | 288 | 178 | 5 | 13 | 297 | 160 | 404 | 4.46e-13 | 69.7 |
| MS.gene28445.t1 | AT5G13480 | 22.222 | 288 | 178 | 5 | 13 | 297 | 148 | 392 | 4.63e-13 | 69.7 |
| MS.gene28445.t1 | AT5G16750 | 27.517 | 149 | 104 | 2 | 12 | 156 | 54 | 202 | 5.06e-13 | 69.7 |
| MS.gene28445.t1 | AT1G52730 | 24.648 | 284 | 203 | 8 | 21 | 299 | 22 | 299 | 6.32e-13 | 68.6 |
| MS.gene28445.t1 | AT1G52730 | 24.648 | 284 | 203 | 8 | 21 | 299 | 22 | 299 | 6.32e-13 | 68.6 |
| MS.gene28445.t1 | AT1G73720 | 20.462 | 303 | 192 | 6 | 4 | 298 | 249 | 510 | 7.65e-13 | 68.9 |
| MS.gene28445.t1 | AT5G49200 | 24.889 | 225 | 145 | 8 | 84 | 297 | 112 | 323 | 8.86e-13 | 68.6 |
| MS.gene28445.t1 | AT2G22040 | 21.479 | 284 | 197 | 7 | 32 | 297 | 12 | 287 | 1.18e-12 | 67.8 |
| MS.gene28445.t1 | AT1G15470 | 24.232 | 293 | 208 | 9 | 13 | 297 | 6 | 292 | 1.30e-12 | 67.8 |
| MS.gene28445.t1 | AT4G29830 | 23.973 | 292 | 187 | 8 | 12 | 297 | 8 | 270 | 1.50e-12 | 67.4 |
| MS.gene28445.t1 | AT1G15440 | 25.551 | 227 | 161 | 6 | 78 | 299 | 325 | 548 | 1.75e-12 | 68.2 |
| MS.gene28445.t1 | AT1G15440 | 25.551 | 227 | 161 | 6 | 78 | 299 | 365 | 588 | 2.02e-12 | 68.2 |
| MS.gene28445.t1 | AT2G32700 | 19.388 | 294 | 224 | 7 | 10 | 298 | 502 | 787 | 2.29e-12 | 67.8 |
| MS.gene28445.t1 | AT2G32700 | 19.388 | 294 | 224 | 7 | 10 | 298 | 502 | 787 | 2.29e-12 | 67.8 |
| MS.gene28445.t1 | AT2G32700 | 19.388 | 294 | 224 | 7 | 10 | 298 | 502 | 787 | 2.29e-12 | 67.8 |
| MS.gene28445.t1 | AT2G32700 | 19.388 | 294 | 224 | 7 | 10 | 298 | 502 | 787 | 2.29e-12 | 67.8 |
| MS.gene28445.t1 | AT2G32700 | 19.388 | 294 | 224 | 7 | 10 | 298 | 502 | 787 | 2.29e-12 | 67.8 |
| MS.gene28445.t1 | AT2G32700 | 19.388 | 294 | 224 | 7 | 10 | 298 | 521 | 806 | 2.37e-12 | 67.8 |
| MS.gene28445.t1 | AT2G32700 | 19.388 | 294 | 224 | 7 | 10 | 298 | 500 | 785 | 2.44e-12 | 67.8 |
| MS.gene28445.t1 | AT1G71840 | 26.636 | 214 | 144 | 7 | 11 | 214 | 190 | 400 | 2.44e-12 | 67.4 |
| MS.gene28445.t1 | AT1G71840 | 22.835 | 254 | 185 | 6 | 53 | 297 | 63 | 314 | 4.83e-11 | 63.5 |
| MS.gene28445.t1 | AT2G47410 | 19.923 | 261 | 179 | 4 | 9 | 254 | 45 | 290 | 3.48e-12 | 67.4 |
| MS.gene28445.t1 | AT2G47410 | 19.923 | 261 | 179 | 4 | 9 | 254 | 45 | 290 | 3.48e-12 | 67.4 |
| MS.gene28445.t1 | AT2G47410 | 19.923 | 261 | 179 | 4 | 9 | 254 | 227 | 472 | 3.82e-12 | 67.4 |
| MS.gene28445.t1 | AT2G47410 | 24.476 | 143 | 105 | 1 | 9 | 148 | 226 | 368 | 4.58e-12 | 67.0 |
| MS.gene28445.t1 | AT2G47410 | 24.476 | 143 | 105 | 1 | 9 | 148 | 227 | 369 | 4.58e-12 | 67.0 |
| MS.gene28445.t1 | AT2G47410 | 24.476 | 143 | 105 | 1 | 9 | 148 | 45 | 187 | 4.70e-12 | 67.0 |
| MS.gene28445.t1 | AT4G18905 | 28.700 | 223 | 124 | 9 | 75 | 271 | 281 | 494 | 1.12e-11 | 65.5 |
| MS.gene28445.t1 | AT4G18905 | 28.700 | 223 | 124 | 9 | 75 | 271 | 291 | 504 | 1.29e-11 | 65.5 |
| MS.gene28445.t1 | AT5G14530 | 21.284 | 296 | 205 | 7 | 13 | 289 | 19 | 305 | 1.94e-11 | 64.3 |
| MS.gene28445.t1 | AT1G79990 | 23.041 | 217 | 159 | 4 | 87 | 297 | 42 | 256 | 4.62e-11 | 63.9 |
| MS.gene28445.t1 | AT1G79990 | 23.041 | 217 | 159 | 4 | 87 | 297 | 42 | 256 | 4.69e-11 | 63.9 |
| MS.gene28445.t1 | AT3G05090 | 23.843 | 281 | 185 | 11 | 33 | 298 | 98 | 364 | 4.77e-11 | 63.9 |
| MS.gene28445.t1 | AT3G05090 | 23.843 | 281 | 185 | 11 | 33 | 298 | 98 | 364 | 4.77e-11 | 63.9 |
| MS.gene28445.t1 | AT3G05090 | 23.843 | 281 | 185 | 11 | 33 | 298 | 98 | 364 | 4.77e-11 | 63.9 |
| MS.gene28445.t1 | AT3G18140 | 21.269 | 268 | 201 | 5 | 39 | 297 | 14 | 280 | 9.56e-11 | 62.0 |
Find 84 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGATGGCTTCGTCTATTTC+TGG | 0.109330 | 4.4:-8580009 | MS.gene28445:CDS |
| GAGATAGACAGGTTTATTAT+TGG | 0.252769 | 4.4:-8582828 | MS.gene28445:CDS |
| AGACTCTACCGTGCGTCTTC+TGG | 0.264022 | 4.4:-8580617 | MS.gene28445:CDS |
| TTATCCTCAGACTTACAAAT+TGG | 0.271790 | 4.4:-8580077 | MS.gene28445:intron |
| TTCGCGGCCATGGGATTTAT+AGG | 0.284326 | 4.4:+8583096 | None:intergenic |
| TGGAACTGTTCTAACCTTAT+TGG | 0.295053 | 4.4:+8580476 | None:intergenic |
| TAATTTGTTCTGCAGGTAAA+TGG | 0.308071 | 4.4:-8581151 | MS.gene28445:intron |
| GACATTGATATACAGTTAAC+AGG | 0.329676 | 4.4:+8580673 | None:intergenic |
| CATCTGTAGATGGCACTATT+CGG | 0.329739 | 4.4:-8579215 | MS.gene28445:CDS |
| AGATAGACAGGTTTATTATT+GGG | 0.345686 | 4.4:-8582827 | MS.gene28445:CDS |
| TTTATGAAATCAACCTGAAT+TGG | 0.354438 | 4.4:+8581037 | None:intergenic |
| CCATAGCACTGAGCCAATTC+AGG | 0.359655 | 4.4:-8581050 | MS.gene28445:intron |
| AATACGGATGCTCATGTAAC+TGG | 0.400972 | 4.4:-8580040 | MS.gene28445:CDS |
| GTTATCATGCAGTTATCCTT+GGG | 0.409693 | 4.4:+8579240 | None:intergenic |
| GGATGGCTTCGTCTATTTCT+GGG | 0.412680 | 4.4:-8580008 | MS.gene28445:CDS |
| CATCGCGAACTTCGCGGCCA+TGG | 0.415416 | 4.4:+8583086 | None:intergenic |
| AGAGAAATATCCGATAGCTT+AGG | 0.427243 | 4.4:-8580700 | MS.gene28445:CDS |
| TGTTATCATGCAGTTATCCT+TGG | 0.439021 | 4.4:+8579239 | None:intergenic |
| GAACTATTACAAGAATATAA+AGG | 0.441015 | 4.4:-8580504 | MS.gene28445:CDS |
| ATGATCAATCATTGCGTGCT+TGG | 0.443572 | 4.4:-8581084 | MS.gene28445:CDS |
| TATTATTGGGATGTTGCAAC+TGG | 0.445931 | 4.4:-8582814 | MS.gene28445:CDS |
| ATGATAACATCATCTGTAGA+TGG | 0.447256 | 4.4:-8579225 | MS.gene28445:CDS |
| ATATAAAGGACACACCAATA+AGG | 0.447715 | 4.4:-8580490 | MS.gene28445:intron |
| ATTATCGGAGGAAGTGTTGA+TGG | 0.455667 | 4.4:-8580846 | MS.gene28445:CDS |
| GGATTGCTGCCTTACCAATA+CGG | 0.459984 | 4.4:-8580056 | MS.gene28445:CDS |
| CCTGAATTGGCTCAGTGCTA+TGG | 0.460757 | 4.4:+8581050 | None:intergenic |
| TGATCAATCATTGCGTGCTT+GGG | 0.463363 | 4.4:-8581083 | MS.gene28445:CDS |
| ATCTGTAGATGGCACTATTC+GGG | 0.463365 | 4.4:-8579214 | MS.gene28445:CDS |
| GAGAAATATCCGATAGCTTA+GGG | 0.483127 | 4.4:-8580699 | MS.gene28445:CDS |
| CTGAATTGGCTCAGTGCTAT+GGG | 0.484928 | 4.4:+8581051 | None:intergenic |
| ATCGCGAACTTCGCGGCCAT+GGG | 0.490154 | 4.4:+8583087 | None:intergenic |
| TTCCTGTGGTGGAGATAGAC+AGG | 0.490646 | 4.4:-8582839 | MS.gene28445:CDS |
| TCCACCACAGGAACATAACT+TGG | 0.495520 | 4.4:+8582849 | None:intergenic |
| CTACCGTGCGTCTTCTGGAT+AGG | 0.506884 | 4.4:-8580612 | MS.gene28445:intron |
| AGAAAATTCCGTGGCCATGA+TGG | 0.509380 | 4.4:-8582781 | MS.gene28445:CDS |
| TGTATATCAATGTCAAATGA+TGG | 0.516600 | 4.4:-8580664 | MS.gene28445:CDS |
| GATGGTAACTGCATCCTAGC+AGG | 0.524905 | 4.4:-8580646 | MS.gene28445:CDS |
| TCATCAGTTGTAGTCTCAGC+AGG | 0.525593 | 4.4:-8581109 | MS.gene28445:CDS |
| GTAACTGGTGGCTCTGAGGA+TGG | 0.527745 | 4.4:-8580025 | MS.gene28445:CDS |
| TTCTTGTAATAGTTCTCCTG+TGG | 0.536142 | 4.4:+8580512 | None:intergenic |
| AACAGGTTGCCCTAAGCTAT+CGG | 0.542218 | 4.4:+8580690 | None:intergenic |
| CGTGGACATCGCGAACTTCG+CGG | 0.543250 | 4.4:+8583080 | None:intergenic |
| GAAGGAGGTGAACGTGCTCA+AGG | 0.544763 | 4.4:-8583236 | MS.gene28445:CDS |
| CATGAGCATCCGTATTGGTA+AGG | 0.548846 | 4.4:+8580047 | None:intergenic |
| AGTTACATGAGCATCCGTAT+TGG | 0.550077 | 4.4:+8580042 | None:intergenic |
| CTTTCTTGTGACAGAACCAC+AGG | 0.550660 | 4.4:-8580528 | MS.gene28445:intron |
| TAGATGGCACTATTCGGGTA+TGG | 0.558909 | 4.4:-8579209 | MS.gene28445:CDS |
| ATCAAAACCTATAAATCCCA+TGG | 0.559964 | 4.4:-8583103 | MS.gene28445:CDS |
| CGAACATTTGATATGCGTAT+CGG | 0.561442 | 4.4:-8580816 | MS.gene28445:CDS |
| AGCACGTTCACCTCCTTCCG+AGG | 0.566985 | 4.4:+8583241 | None:intergenic |
| GTGCTCAAGGGTCACGAAGG+TGG | 0.568115 | 4.4:-8583223 | MS.gene28445:CDS |
| AAGACCGTACCATACGCCTC+TGG | 0.569874 | 4.4:-8583147 | MS.gene28445:CDS |
| AACCTGTCTATCTCCACCAC+AGG | 0.576021 | 4.4:+8582837 | None:intergenic |
| GATTCCAGAGGCGTATGGTA+CGG | 0.592188 | 4.4:+8583143 | None:intergenic |
| CATTTGATATGCGTATCGGA+AGG | 0.593068 | 4.4:-8580812 | MS.gene28445:intron |
| GTGAGGATTCCAGAGGCGTA+TGG | 0.596579 | 4.4:+8583138 | None:intergenic |
| TGTGGAAGATCTTCCTCGGA+AGG | 0.601091 | 4.4:-8583254 | MS.gene28445:CDS |
| GCCGCGAGGTTCAACTCCGA+CGG | 0.603996 | 4.4:-8583193 | MS.gene28445:CDS |
| AACTCCAAGTTATGTTCCTG+TGG | 0.606172 | 4.4:-8582853 | MS.gene28445:CDS |
| AAGGAGGTGAACGTGCTCAA+GGG | 0.607897 | 4.4:-8583235 | MS.gene28445:CDS |
| GGCAATTATATCCTCAGTTG+CGG | 0.609854 | 4.4:-8583172 | MS.gene28445:CDS |
| TCCAAGTTATGTTCCTGTGG+TGG | 0.613893 | 4.4:-8582850 | MS.gene28445:CDS |
| TGAGTGTGGAAGATCTTCCT+CGG | 0.617239 | 4.4:-8583258 | MS.gene28445:CDS |
| TAGAGTCTAAGCAACCTGCT+AGG | 0.617959 | 4.4:+8580632 | None:intergenic |
| AGTGAGTATACGTGGTGACG+TGG | 0.627059 | 4.4:+8583062 | None:intergenic |
| ATTCCGTGGCCATGATGGTG+AGG | 0.629879 | 4.4:-8582776 | MS.gene28445:intron |
| TTGATATGAATTCCACGGTG+AGG | 0.633573 | 4.4:+8583121 | None:intergenic |
| GTACCTCACCATCATGGCCA+CGG | 0.640124 | 4.4:+8582773 | None:intergenic |
| ACGGATGCTCATGTAACTGG+TGG | 0.640929 | 4.4:-8580037 | MS.gene28445:CDS |
| AAGTGTAAGTTATCACCCCA+AGG | 0.642144 | 4.4:-8579256 | MS.gene28445:CDS |
| TCATGTAACTGGTGGCTCTG+AGG | 0.656331 | 4.4:-8580029 | MS.gene28445:CDS |
| TTATCATGCAGTTATCCTTG+GGG | 0.657074 | 4.4:+8579241 | None:intergenic |
| CGTGTTATTAGAAAATTCCG+TGG | 0.660612 | 4.4:-8582790 | MS.gene28445:CDS |
| GGAAGATCTTCCTCGGAAGG+AGG | 0.664923 | 4.4:-8583251 | MS.gene28445:CDS |
| ACTGAGGATATAATTGCCGT+CGG | 0.667947 | 4.4:+8583177 | None:intergenic |
| TACGGTCTTTACCGCAACTG+AGG | 0.672796 | 4.4:+8583161 | None:intergenic |
| AGACGTAGAAGCTATGAGTG+TGG | 0.679614 | 4.4:-8583272 | None:intergenic |
| ATACCTATCCAGAAGACGCA+CGG | 0.683413 | 4.4:+8580609 | None:intergenic |
| AACGTGCTCAAGGGTCACGA+AGG | 0.685668 | 4.4:-8583226 | MS.gene28445:CDS |
| ATTCAGAGCTCACACCTCAG+TGG | 0.708054 | 4.4:-8579957 | MS.gene28445:intron |
| TTCCACGGTGAGGATTCCAG+AGG | 0.719060 | 4.4:+8583131 | None:intergenic |
| AAGGTGGCGTGCTTGCCGCG+AGG | 0.723647 | 4.4:-8583207 | MS.gene28445:CDS |
| CGCCTCTGGAATCCTCACCG+TGG | 0.727086 | 4.4:-8583133 | MS.gene28445:CDS |
| GCCGTCGGAGTTGAACCTCG+CGG | 0.741011 | 4.4:+8583192 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAATAAAATCAGA+TGG | + | chr4.4:8580935-8580954 | None:intergenic | 10.0% |
| !! | ATGTAAAATTTAAACAAAAT+TGG | - | chr4.4:8579874-8579893 | MS.gene28445:intron | 10.0% |
| !! | ATATTTACTAGTTATATCAT+CGG | + | chr4.4:8580044-8580063 | None:intergenic | 15.0% |
| !! | ATCATATATAGATAAAACAT+GGG | + | chr4.4:8580639-8580658 | None:intergenic | 15.0% |
| !! | CAATAAAATATATTGACATA+AGG | + | chr4.4:8580073-8580092 | None:intergenic | 15.0% |
| !! | TATCATATATAGATAAAACA+TGG | + | chr4.4:8580640-8580659 | None:intergenic | 15.0% |
| !! | TTTATTGTTTATGATACTAT+CGG | - | chr4.4:8580086-8580105 | MS.gene28445:intron | 15.0% |
| !!! | AATTAGTATATAATTTTTGG+CGG | - | chr4.4:8582732-8582751 | MS.gene28445:intron | 15.0% |
| !!! | TTTTTTTTTAACAAGCTATT+TGG | - | chr4.4:8582186-8582205 | MS.gene28445:intron | 15.0% |
| !! | ATGTAGATCTAAAGAAAAAT+GGG | - | chr4.4:8580117-8580136 | MS.gene28445:intron | 20.0% |
| !! | GAACTATTACAAGAATATAA+AGG | - | chr4.4:8581955-8581974 | MS.gene28445:intron | 20.0% |
| !! | GTGAAAATTGCAATAAAATA+CGG | - | chr4.4:8581093-8581112 | MS.gene28445:CDS | 20.0% |
| !! | TAAAATATATTGACATAAGG+AGG | + | chr4.4:8580070-8580089 | None:intergenic | 20.0% |
| !! | TATTTATTACGAAGAATTTG+AGG | - | chr4.4:8579773-8579792 | MS.gene28445:intron | 20.0% |
| !! | TTAACAAAAACGGAAATTAT+CGG | - | chr4.4:8581598-8581617 | MS.gene28445:intron | 20.0% |
| !! | TTAATACTGTAGTTAATATG+TGG | - | chr4.4:8580788-8580807 | MS.gene28445:intron | 20.0% |
| !!! | AAGAAACTATGGATTAAATA+TGG | + | chr4.4:8580973-8580992 | None:intergenic | 20.0% |
| !!! | ACAAAATAACTCATTCTTTT+AGG | + | chr4.4:8583175-8583194 | None:intergenic | 20.0% |
| !!! | AGGTTTGTTACTATATTTAT+AGG | - | chr4.4:8581667-8581686 | MS.gene28445:intron | 20.0% |
| !!! | ATTAGTATATAATTTTTGGC+GGG | - | chr4.4:8582733-8582752 | MS.gene28445:intron | 20.0% |
| !!! | GATTATGTAGATTTTTGTTT+TGG | + | chr4.4:8579901-8579920 | None:intergenic | 20.0% |
| ! | AATTGAAAACAAAATGTTCC+CGG | + | chr4.4:8582640-8582659 | None:intergenic | 25.0% |
| ! | AGATAGACAGGTTTATTATT+GGG | - | chr4.4:8579632-8579651 | MS.gene28445:intron | 25.0% |
| ! | ATAGCATTACTTACCAATTA+AGG | - | chr4.4:8582123-8582142 | MS.gene28445:intron | 25.0% |
| ! | ATAGGTATGTTTACTACATT+TGG | - | chr4.4:8581865-8581884 | MS.gene28445:intron | 25.0% |
| ! | ATTGATATATGCAAAAGAAG+TGG | + | chr4.4:8582777-8582796 | None:intergenic | 25.0% |
| ! | ATTTATGAATAACTCAAGCA+CGG | + | chr4.4:8580699-8580718 | None:intergenic | 25.0% |
| ! | CATGTAGATCTAAAGAAAAA+TGG | - | chr4.4:8580116-8580135 | MS.gene28445:intron | 25.0% |
| ! | GTCTGTTTGTTTAACAAAAA+CGG | - | chr4.4:8581588-8581607 | MS.gene28445:intron | 25.0% |
| ! | TAGGTATGTTTACTACATTT+GGG | - | chr4.4:8581866-8581885 | MS.gene28445:intron | 25.0% |
| ! | TGTAGATCTAAAGAAAAATG+GGG | - | chr4.4:8580118-8580137 | MS.gene28445:intron | 25.0% |
| ! | TGTATATCAATGTCAAATGA+TGG | - | chr4.4:8581795-8581814 | MS.gene28445:intron | 25.0% |
| ! | TTGTTAAAAGTAGAAGCAAT+AGG | + | chr4.4:8580850-8580869 | None:intergenic | 25.0% |
| ! | TTTATGAAATCAACCTGAAT+TGG | + | chr4.4:8581425-8581444 | None:intergenic | 25.0% |
| ! | TTTCATTGCATAAGAAACTA+TGG | + | chr4.4:8580984-8581003 | None:intergenic | 25.0% |
| !! | AAAAAAACATTTTACCACTG+AGG | + | chr4.4:8582519-8582538 | None:intergenic | 25.0% |
| !! | TACCTATCTCAAAAAAGTAT+TGG | - | chr4.4:8579987-8580006 | MS.gene28445:CDS | 25.0% |
| !!! | AAAGAATGAGTTATTTTGTC+AGG | - | chr4.4:8583176-8583195 | MS.gene28445:CDS | 25.0% |
| !!! | AACCAATACTTTTTTGAGAT+AGG | + | chr4.4:8579992-8580011 | None:intergenic | 25.0% |
| !!! | ATAAAGTTTTAGGTTCTGAT+AGG | - | chr4.4:8581285-8581304 | MS.gene28445:intron | 25.0% |
| !!! | CACTTATTTTCTCATCAATT+AGG | - | chr4.4:8581461-8581480 | MS.gene28445:intron | 25.0% |
| !!! | TGCTGTTTTGTTTACTATTA+GGG | - | chr4.4:8579581-8579600 | MS.gene28445:intron | 25.0% |
| !!! | TTAGTATATAATTTTTGGCG+GGG | - | chr4.4:8582734-8582753 | MS.gene28445:intron | 25.0% |
| AAACATAGCTAACACCATAA+GGG | + | chr4.4:8580500-8580519 | None:intergenic | 30.0% | |
| AAATCCTTTCTAATTGCACA+TGG | - | chr4.4:8580164-8580183 | MS.gene28445:intron | 30.0% | |
| AAATGGGGGTTGTATTATAT+TGG | - | chr4.4:8580133-8580152 | MS.gene28445:intron | 30.0% | |
| ACGAGTAATGCTATATATGA+TGG | + | chr4.4:8582006-8582025 | None:intergenic | 30.0% | |
| AGACTATATATGTTTCCTTG+TGG | + | chr4.4:8580208-8580227 | None:intergenic | 30.0% | |
| AGGTATGTTTACTACATTTG+GGG | - | chr4.4:8581867-8581886 | MS.gene28445:intron | 30.0% | |
| ATATAAAGGACACACCAATA+AGG | - | chr4.4:8581969-8581988 | MS.gene28445:intron | 30.0% | |
| ATCAAAACCTATAAATCCCA+TGG | - | chr4.4:8579356-8579375 | MS.gene28445:intron | 30.0% | |
| ATGAGAAAATAAGTGAGACA+AGG | + | chr4.4:8581456-8581475 | None:intergenic | 30.0% | |
| ATGATAACATCATCTGTAGA+TGG | - | chr4.4:8583234-8583253 | MS.gene28445:CDS | 30.0% | |
| CATTAACATATCTGCATCTA+TGG | - | chr4.4:8582230-8582249 | MS.gene28445:intron | 30.0% | |
| CGAGATGAAATTCTCATATA+CGG | - | chr4.4:8579942-8579961 | MS.gene28445:intron | 30.0% | |
| CTTGAACTAATACTTTCACA+CGG | - | chr4.4:8582604-8582623 | MS.gene28445:intron | 30.0% | |
| GACATTGATATACAGTTAAC+AGG | + | chr4.4:8581789-8581808 | None:intergenic | 30.0% | |
| GAGATAGACAGGTTTATTAT+TGG | - | chr4.4:8579631-8579650 | MS.gene28445:intron | 30.0% | |
| GGAAAGAGTAAAGATAAAAG+TGG | + | chr4.4:8580879-8580898 | None:intergenic | 30.0% | |
| GTAGATCTAAAGAAAAATGG+GGG | - | chr4.4:8580119-8580138 | MS.gene28445:intron | 30.0% | |
| TAAAACTTTATTGCCTGTTC+TGG | + | chr4.4:8581276-8581295 | None:intergenic | 30.0% | |
| TATGAGAATTTCATCTCGTA+CGG | + | chr4.4:8579940-8579959 | None:intergenic | 30.0% | |
| TGAGAAAATAAGTGAGACAA+GGG | + | chr4.4:8581455-8581474 | None:intergenic | 30.0% | |
| TGATTGTGAATTTCTGACAT+AGG | + | chr4.4:8580316-8580335 | None:intergenic | 30.0% | |
| TTATCATGAACGAATGAAGA+AGG | + | chr4.4:8579435-8579454 | None:intergenic | 30.0% | |
| TTATCCTCAGACTTACAAAT+TGG | - | chr4.4:8582382-8582401 | MS.gene28445:intron | 30.0% | |
| TTGAAGCTTCAACAAAATTG+AGG | + | chr4.4:8582962-8582981 | None:intergenic | 30.0% | |
| ! | AATTAACCCGAAAGTACAAA+TGG | + | chr4.4:8580616-8580635 | None:intergenic | 30.0% |
| ! | AGAACAGGCAATAAAGTTTT+AGG | - | chr4.4:8581275-8581294 | MS.gene28445:intron | 30.0% |
| ! | GGTAAGGATTATTTTCATAC+TGG | + | chr4.4:8582818-8582837 | None:intergenic | 30.0% |
| ! | TATACTTTTGCTAAACTCTG+TGG | - | chr4.4:8582983-8583002 | MS.gene28445:intron | 30.0% |
| ! | TTCATTCTAGAAAAAAGCTG+TGG | - | chr4.4:8582548-8582567 | MS.gene28445:intron | 30.0% |
| ! | TTTTTGTTGAATGTGCACAT+TGG | + | chr4.4:8580903-8580922 | None:intergenic | 30.0% |
| !! | AGGTTTTGATATGAATTCCA+CGG | + | chr4.4:8579346-8579365 | None:intergenic | 30.0% |
| !! | TAATTTGTTCTGCAGGTAAA+TGG | - | chr4.4:8581308-8581327 | MS.gene28445:intron | 30.0% |
| !!! | GTGCTGTTTTGTTTACTATT+AGG | - | chr4.4:8579580-8579599 | MS.gene28445:intron | 30.0% |
| !!! | TTTTGAGATAGGTAAACCAA+AGG | + | chr4.4:8579981-8580000 | None:intergenic | 30.0% |
| AAAGAAGAAAAACGTGCTTC+AGG | + | chr4.4:8582289-8582308 | None:intergenic | 35.0% | |
| AAAGGACAGTGAATCTAACA+GGG | + | chr4.4:8581915-8581934 | None:intergenic | 35.0% | |
| ACAAAAACGGAAATTATCGG+AGG | - | chr4.4:8581601-8581620 | MS.gene28445:intron | 35.0% | |
| ACATATATAGTCTCACCACT+AGG | - | chr4.4:8580215-8580234 | MS.gene28445:intron | 35.0% | |
| AGAACCATGTGCAATTAGAA+AGG | + | chr4.4:8580171-8580190 | None:intergenic | 35.0% | |
| AGAGAAATATCCGATAGCTT+AGG | - | chr4.4:8581759-8581778 | MS.gene28445:intron | 35.0% | |
| AGTGAGTTTGACAAAAATCC+CGG | - | chr4.4:8582931-8582950 | MS.gene28445:intron | 35.0% | |
| ATTCTCATATACGGTTCTCA+AGG | - | chr4.4:8579951-8579970 | MS.gene28445:intron | 35.0% | |
| CAACATCTAAGTGCATGTTT+GGG | - | chr4.4:8582903-8582922 | MS.gene28445:intron | 35.0% | |
| CAATCCAATTTGTAAGTCTG+AGG | + | chr4.4:8582389-8582408 | None:intergenic | 35.0% | |
| CATCTGCAATCTTCCTTAAT+TGG | + | chr4.4:8582139-8582158 | None:intergenic | 35.0% | |
| CATTTGGGGAACATTTACTT+TGG | - | chr4.4:8581881-8581900 | MS.gene28445:intron | 35.0% | |
| CGAACATTTGATATGCGTAT+CGG | - | chr4.4:8581643-8581662 | MS.gene28445:intron | 35.0% | |
| CTACAAACTAAGGCTATGTT+TGG | + | chr4.4:8579545-8579564 | None:intergenic | 35.0% | |
| CTATATATGTTTCCTTGTGG+TGG | + | chr4.4:8580205-8580224 | None:intergenic | 35.0% | |
| GAAACATAGCTAACACCATA+AGG | + | chr4.4:8580501-8580520 | None:intergenic | 35.0% | |
| GAGAAAATAAGTGAGACAAG+GGG | + | chr4.4:8581454-8581473 | None:intergenic | 35.0% | |
| GAGAAATATCCGATAGCTTA+GGG | - | chr4.4:8581760-8581779 | MS.gene28445:intron | 35.0% | |
| GCACTTATATGTTAAGTGCT+TGG | - | chr4.4:8579506-8579525 | MS.gene28445:intron | 35.0% | |
| GTAACTGCTAATTGCATTGA+TGG | + | chr4.4:8583033-8583052 | None:intergenic | 35.0% | |
| GTTATCATGCAGTTATCCTT+GGG | + | chr4.4:8583222-8583241 | None:intergenic | 35.0% | |
| TATTATTGGGATGTTGCAAC+TGG | - | chr4.4:8579645-8579664 | MS.gene28445:intron | 35.0% | |
| TGAACGAATGAAGAAGGTAA+AGG | + | chr4.4:8579429-8579448 | None:intergenic | 35.0% | |
| TGGAACTGTTCTAACCTTAT+TGG | + | chr4.4:8581986-8582005 | None:intergenic | 35.0% | |
| TGTTATCATGCAGTTATCCT+TGG | + | chr4.4:8583223-8583242 | None:intergenic | 35.0% | |
| TTATACTGAGTCTGCAATTG+TGG | - | chr4.4:8581037-8581056 | MS.gene28445:intron | 35.0% | |
| TTATCATGCAGTTATCCTTG+GGG | + | chr4.4:8583221-8583240 | None:intergenic | 35.0% | |
| TTCAGTCACACTACAAACTA+AGG | + | chr4.4:8579555-8579574 | None:intergenic | 35.0% | |
| TTCTCATATACGGTTCTCAA+GGG | - | chr4.4:8579952-8579971 | MS.gene28445:intron | 35.0% | |
| TTCTTGTAATAGTTCTCCTG+TGG | + | chr4.4:8581950-8581969 | None:intergenic | 35.0% | |
| TTTCACCATATAAAGTTGCG+AGG | + | chr4.4:8579827-8579846 | None:intergenic | 35.0% | |
| TTTCTAATTGCACATGGTTC+TGG | - | chr4.4:8580170-8580189 | MS.gene28445:intron | 35.0% | |
| ! | CGTGTTATTAGAAAATTCCG+TGG | - | chr4.4:8579669-8579688 | MS.gene28445:intron | 35.0% |
| ! | GTTTTCAATTCCCTCTTGAT+GGG | - | chr4.4:8582650-8582669 | MS.gene28445:intron | 35.0% |
| ! | TATTGCCTGTTCTGGATTTA+AGG | + | chr4.4:8581268-8581287 | None:intergenic | 35.0% |
| ! | TGTTTTCAATTCCCTCTTGA+TGG | - | chr4.4:8582649-8582668 | MS.gene28445:intron | 35.0% |
| ! | TTCACACGGATTTTCAATTC+CGG | - | chr4.4:8582618-8582637 | MS.gene28445:intron | 35.0% |
| ! | TTCTAGAAAAAAGCTGTGGA+AGG | - | chr4.4:8582552-8582571 | MS.gene28445:intron | 35.0% |
| ! | TTTTCAATTCCCTCTTGATG+GGG | - | chr4.4:8582651-8582670 | MS.gene28445:intron | 35.0% |
| !! | TAAAAAGTACCTCACCATCA+TGG | + | chr4.4:8579695-8579714 | None:intergenic | 35.0% |
| !! | TGATAGGTAATTTGTTCTGC+AGG | - | chr4.4:8581301-8581320 | MS.gene28445:intron | 35.0% |
| !!! | GGGTTGGTGTTTGTTTTTTT+GGG | - | chr4.4:8580456-8580475 | MS.gene28445:intron | 35.0% |
| !!! | GGTTGGTGTTTGTTTTTTTG+GGG | - | chr4.4:8580457-8580476 | MS.gene28445:intron | 35.0% |
| !!! | GTTGGTGTTTGTTTTTTTGG+GGG | - | chr4.4:8580458-8580477 | MS.gene28445:intron | 35.0% |
| !!! | GTTTTTTGTTTGTCCTTCTC+CGG | - | chr4.4:8580588-8580607 | MS.gene28445:intron | 35.0% |
| !!! | TTGGTGTTTGTTTTTTTGGG+GGG | - | chr4.4:8580459-8580478 | MS.gene28445:intron | 35.0% |
| AACTCCAAGTTATGTTCCTG+TGG | - | chr4.4:8579606-8579625 | MS.gene28445:intron | 40.0% | |
| AAGTGTAAGTTATCACCCCA+AGG | - | chr4.4:8583203-8583222 | MS.gene28445:CDS | 40.0% | |
| AATACGGATGCTCATGTAAC+TGG | - | chr4.4:8582419-8582438 | MS.gene28445:intron | 40.0% | |
| ACTGAGGATATAATTGCCGT+CGG | + | chr4.4:8579285-8579304 | None:intergenic | 40.0% | |
| ACTGTCAAGTGTTTGTGGTA+AGG | + | chr4.4:8582834-8582853 | None:intergenic | 40.0% | |
| AGTTACATGAGCATCCGTAT+TGG | + | chr4.4:8582420-8582439 | None:intergenic | 40.0% | |
| ATAAGCCAGCAGAGAGAAAT+TGG | + | chr4.4:8581504-8581523 | None:intergenic | 40.0% | |
| ATCAAAAACCTTGACAGCAC+TGG | - | chr4.4:8581158-8581177 | MS.gene28445:intron | 40.0% | |
| ATCTGTAGATGGCACTATTC+GGG | - | chr4.4:8583245-8583264 | MS.gene28445:CDS | 40.0% | |
| ATGATCAATCATTGCGTGCT+TGG | - | chr4.4:8581375-8581394 | MS.gene28445:intron | 40.0% | |
| ATGTGCCTCGCAACTTTATA+TGG | - | chr4.4:8579819-8579838 | MS.gene28445:intron | 40.0% | |
| CATCTGTAGATGGCACTATT+CGG | - | chr4.4:8583244-8583263 | MS.gene28445:CDS | 40.0% | |
| CATTTGATATGCGTATCGGA+AGG | - | chr4.4:8581647-8581666 | MS.gene28445:intron | 40.0% | |
| CTGGCTTATTAATCAGGAGT+TGG | - | chr4.4:8581515-8581534 | MS.gene28445:intron | 40.0% | |
| CTTCAGGAATTGGTCATTGT+AGG | + | chr4.4:8582273-8582292 | None:intergenic | 40.0% | |
| CTTTCCTCTACTGTTGTTAC+TGG | - | chr4.4:8580824-8580843 | MS.gene28445:CDS | 40.0% | |
| GAAAAACGTGCTTCAGGAAT+TGG | + | chr4.4:8582283-8582302 | None:intergenic | 40.0% | |
| GAAAGGACAGTGAATCTAAC+AGG | + | chr4.4:8581916-8581935 | None:intergenic | 40.0% | |
| GCAACATCTAAGTGCATGTT+TGG | - | chr4.4:8582902-8582921 | MS.gene28445:intron | 40.0% | |
| GGCAATTATATCCTCAGTTG+CGG | - | chr4.4:8579287-8579306 | MS.gene28445:intron | 40.0% | |
| TAAGCCAGCAGAGAGAAATT+GGG | + | chr4.4:8581503-8581522 | None:intergenic | 40.0% | |
| TATGAATAACTCAAGCACGG+AGG | + | chr4.4:8580696-8580715 | None:intergenic | 40.0% | |
| TCATTGAGAGCTAAAGACCA+AGG | + | chr4.4:8581216-8581235 | None:intergenic | 40.0% | |
| TCCGGTTCCATTTGTACTTT+CGG | - | chr4.4:8580606-8580625 | MS.gene28445:intron | 40.0% | |
| TCTCAACTGTCAAGTGTTTG+TGG | + | chr4.4:8582839-8582858 | None:intergenic | 40.0% | |
| TCTCATATACGGTTCTCAAG+GGG | - | chr4.4:8579953-8579972 | MS.gene28445:intron | 40.0% | |
| TGATCAATCATTGCGTGCTT+GGG | - | chr4.4:8581376-8581395 | MS.gene28445:intron | 40.0% | |
| TTGATATGAATTCCACGGTG+AGG | + | chr4.4:8579341-8579360 | None:intergenic | 40.0% | |
| TTGTTGAATGTGCACATTGG+AGG | + | chr4.4:8580900-8580919 | None:intergenic | 40.0% | |
| TTTCAATTCCCTCTTGATGG+GGG | - | chr4.4:8582652-8582671 | MS.gene28445:intron | 40.0% | |
| TTTCATCTACACTGCCACTA+AGG | + | chr4.4:8580267-8580286 | None:intergenic | 40.0% | |
| ! | CCTGTTCTGGATTTAAGGTT+GGG | + | chr4.4:8581263-8581282 | None:intergenic | 40.0% |
| ! | TCACACGGATTTTCAATTCC+GGG | - | chr4.4:8582619-8582638 | MS.gene28445:intron | 40.0% |
| !! | ATTATCGGAGGAAGTGTTGA+TGG | - | chr4.4:8581613-8581632 | MS.gene28445:intron | 40.0% |
| !! | TCTCTGCTGGCTTATTAATC+AGG | - | chr4.4:8581509-8581528 | MS.gene28445:intron | 40.0% |
| !!! | GGGGTTGGTGTTTGTTTTTT+TGG | - | chr4.4:8580455-8580474 | MS.gene28445:intron | 40.0% |
| !!! | GTATATAATTTTTGGCGGGG+TGG | - | chr4.4:8582737-8582756 | MS.gene28445:intron | 40.0% |
| AAAGACCAAGGTCGCGAAAA+AGG | + | chr4.4:8581204-8581223 | None:intergenic | 45.0% | |
| AACAGGTTGCCCTAAGCTAT+CGG | + | chr4.4:8581772-8581791 | None:intergenic | 45.0% | |
| AAGACCAAGGTCGCGAAAAA+GGG | + | chr4.4:8581203-8581222 | None:intergenic | 45.0% | |
| AGAAAATTCCGTGGCCATGA+TGG | - | chr4.4:8579678-8579697 | MS.gene28445:intron | 45.0% | |
| AGAGAAGCAGTGAACCTTAG+TGG | - | chr4.4:8580250-8580269 | MS.gene28445:intron | 45.0% | |
| AGGATGGCTTCGTCTATTTC+TGG | - | chr4.4:8582450-8582469 | MS.gene28445:intron | 45.0% | |
| AGTACAAATGGAACCGGAGA+AGG | + | chr4.4:8580604-8580623 | None:intergenic | 45.0% | |
| AGTCAATACTGTGAAGTCCG+CGG | + | chr4.4:8582682-8582701 | None:intergenic | 45.0% | |
| ATACCTATCCAGAAGACGCA+CGG | + | chr4.4:8581853-8581872 | None:intergenic | 45.0% | |
| CCACAATTGCAGTCATGCTA+CGG | - | chr4.4:8581125-8581144 | MS.gene28445:CDS | 45.0% | |
| CCCAACCTTAAATCCAGAAC+AGG | - | chr4.4:8581260-8581279 | MS.gene28445:intron | 45.0% | |
| CCGGTTCCATTTGTACTTTC+GGG | - | chr4.4:8580607-8580626 | MS.gene28445:intron | 45.0% | |
| CGAAGAACGTCTTGAGATTC+AGG | - | chr4.4:8580012-8580031 | MS.gene28445:CDS | 45.0% | |
| CTCATATACGGTTCTCAAGG+GGG | - | chr4.4:8579954-8579973 | MS.gene28445:intron | 45.0% | |
| CTTTCTTGTGACAGAACCAC+AGG | - | chr4.4:8581931-8581950 | MS.gene28445:intron | 45.0% | |
| GAGTTTGACAAAAATCCCGG+TGG | - | chr4.4:8582934-8582953 | MS.gene28445:intron | 45.0% | |
| GCTAAACTCTGTGGTGTACT+AGG | - | chr4.4:8582992-8583011 | MS.gene28445:intron | 45.0% | |
| GGATTGCTGCCTTACCAATA+CGG | - | chr4.4:8582403-8582422 | MS.gene28445:intron | 45.0% | |
| GTCACAAATCCTCACTCTCA+TGG | + | chr4.4:8580767-8580786 | None:intergenic | 45.0% | |
| GTGCAAGGGATACAGGAAAA+AGG | + | chr4.4:8580556-8580575 | None:intergenic | 45.0% | |
| TAGAGTCTAAGCAACCTGCT+AGG | + | chr4.4:8581830-8581849 | None:intergenic | 45.0% | |
| TAGATGGCACTATTCGGGTA+TGG | - | chr4.4:8583250-8583269 | MS.gene28445:CDS | 45.0% | |
| TAGGCCAGTAACAACAGTAG+AGG | + | chr4.4:8580831-8580850 | None:intergenic | 45.0% | |
| TAGTCTCACCACTAGGAAGT+AGG | - | chr4.4:8580222-8580241 | MS.gene28445:intron | 45.0% | |
| TCATCAGTTGTAGTCTCAGC+AGG | - | chr4.4:8581350-8581369 | MS.gene28445:intron | 45.0% | |
| TCCAAGTTATGTTCCTGTGG+TGG | - | chr4.4:8579609-8579628 | MS.gene28445:intron | 45.0% | |
| TCCACCACAGGAACATAACT+TGG | + | chr4.4:8579613-8579632 | None:intergenic | 45.0% | |
| TGAGTGTGGAAGATCTTCCT+CGG | - | chr4.4:8579201-8579220 | MS.gene28445:CDS | 45.0% | |
| ! | AACAAAATTGAGGTGCCACC+GGG | + | chr4.4:8582952-8582971 | None:intergenic | 45.0% |
| ! | ATGCAGTTTTTGTCTGCTGC+GGG | - | chr4.4:8583068-8583087 | MS.gene28445:intron | 45.0% |
| ! | CAACAAAATTGAGGTGCCAC+CGG | + | chr4.4:8582953-8582972 | None:intergenic | 45.0% |
| ! | CATGAGCATCCGTATTGGTA+AGG | + | chr4.4:8582415-8582434 | None:intergenic | 45.0% |
| ! | CCCGAAAGTACAAATGGAAC+CGG | + | chr4.4:8580610-8580629 | None:intergenic | 45.0% |
| ! | CTGAATTGGCTCAGTGCTAT+GGG | + | chr4.4:8581411-8581430 | None:intergenic | 45.0% |
| ! | CTGTGGTTCTGTCACAAGAA+AGG | + | chr4.4:8581933-8581952 | None:intergenic | 45.0% |
| ! | GATGCAGTTTTTGTCTGCTG+CGG | - | chr4.4:8583067-8583086 | MS.gene28445:intron | 45.0% |
| ! | GCCTGTTCTGGATTTAAGGT+TGG | + | chr4.4:8581264-8581283 | None:intergenic | 45.0% |
| ! | GGATGGCTTCGTCTATTTCT+GGG | - | chr4.4:8582451-8582470 | MS.gene28445:intron | 45.0% |
| ! | TCTGAAGTCCTACTTCCTAG+TGG | + | chr4.4:8580233-8580252 | None:intergenic | 45.0% |
| !! | CATAAGGGCACCACAAAAAC+CGG | + | chr4.4:8580485-8580504 | None:intergenic | 45.0% |
| !! | CGGACTTCACAGTATTGACT+TGG | - | chr4.4:8582682-8582701 | MS.gene28445:intron | 45.0% |
| !!! | ATAATTTTTGGCGGGGTGGA+TGG | - | chr4.4:8582741-8582760 | MS.gene28445:intron | 45.0% |
| !!! | TGTTTGTTTTTTTGGGGGGC+CGG | - | chr4.4:8580463-8580482 | MS.gene28445:intron | 45.0% |
| !!! | TTAAATTAGTATATAATTTT+TGG | - | chr4.4:8582729-8582748 | MS.gene28445:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTGAA+TGG | + | chr4.4:8580670-8580689 | None:intergenic | 5.0% |
| AACCTGTCTATCTCCACCAC+AGG | + | chr4.4:8579625-8579644 | None:intergenic | 50.0% | |
| AAGGAGGTGAACGTGCTCAA+GGG | - | chr4.4:8579224-8579243 | MS.gene28445:CDS | 50.0% | |
| ACCAGTAGTGCAAGGGATAC+AGG | + | chr4.4:8580563-8580582 | None:intergenic | 50.0% | |
| ACCGATACCAGACTCAAGCA+CGG | + | chr4.4:8580343-8580362 | None:intergenic | 50.0% | |
| ACGGATGCTCATGTAACTGG+TGG | - | chr4.4:8582422-8582441 | MS.gene28445:intron | 50.0% | |
| ATACCAGACTCAAGCACGGA+GGG | + | chr4.4:8580339-8580358 | None:intergenic | 50.0% | |
| ATGTTTCCTTGTGGTGGCAC+TGG | + | chr4.4:8580199-8580218 | None:intergenic | 50.0% | |
| ATTCAGAGCTCACACCTCAG+TGG | - | chr4.4:8582502-8582521 | MS.gene28445:intron | 50.0% | |
| CAATTGTGCCAGTGCTGTCA+AGG | + | chr4.4:8581169-8581188 | None:intergenic | 50.0% | |
| CAGCAAGGAAACAAGCTGTC+AGG | + | chr4.4:8580433-8580452 | None:intergenic | 50.0% | |
| CCGTAGCATGACTGCAATTG+TGG | + | chr4.4:8581128-8581147 | None:intergenic | 50.0% | |
| GATGGTAACTGCATCCTAGC+AGG | - | chr4.4:8581813-8581832 | MS.gene28445:intron | 50.0% | |
| GGAATTGCAAGCTCGTGTTG+CGG | + | chr4.4:8580295-8580314 | None:intergenic | 50.0% | |
| GGTGAGAGAGTGAGTATACG+TGG | + | chr4.4:8579408-8579427 | None:intergenic | 50.0% | |
| TACGGTCTTTACCGCAACTG+AGG | + | chr4.4:8579301-8579320 | None:intergenic | 50.0% | |
| TCCGTGCTTGAGTCTGGTAT+CGG | - | chr4.4:8580339-8580358 | MS.gene28445:intron | 50.0% | |
| TCCTGTATCCCTTGCACTAC+TGG | - | chr4.4:8580559-8580578 | MS.gene28445:intron | 50.0% | |
| TGCACCCAATTTCTCTCTGC+TGG | - | chr4.4:8581496-8581515 | MS.gene28445:intron | 50.0% | |
| TGTGGAAGATCTTCCTCGGA+AGG | - | chr4.4:8579205-8579224 | MS.gene28445:CDS | 50.0% | |
| TTCGCGGCCATGGGATTTAT+AGG | + | chr4.4:8579366-8579385 | None:intergenic | 50.0% | |
| TTGCAGTCATGCTACGGTCT+TGG | - | chr4.4:8581131-8581150 | MS.gene28445:CDS | 50.0% | |
| ! | ACAGCTTGTTTCCTTGCTGG+AGG | - | chr4.4:8580434-8580453 | MS.gene28445:intron | 50.0% |
| ! | AGCTTGTTTCCTTGCTGGAG+GGG | - | chr4.4:8580436-8580455 | MS.gene28445:intron | 50.0% |
| ! | AGTGAGTATACGTGGTGACG+TGG | + | chr4.4:8579400-8579419 | None:intergenic | 50.0% |
| ! | CAGCTTGTTTCCTTGCTGGA+GGG | - | chr4.4:8580435-8580454 | MS.gene28445:intron | 50.0% |
| ! | CCATAGCACTGAGCCAATTC+AGG | - | chr4.4:8581409-8581428 | MS.gene28445:intron | 50.0% |
| ! | CCTGAATTGGCTCAGTGCTA+TGG | + | chr4.4:8581412-8581431 | None:intergenic | 50.0% |
| ! | CGGTTTTTGTGGTGCCCTTA+TGG | - | chr4.4:8580483-8580502 | MS.gene28445:intron | 50.0% |
| ! | CTGACAGCTTGTTTCCTTGC+TGG | - | chr4.4:8580431-8580450 | MS.gene28445:intron | 50.0% |
| ! | GATTCCAGAGGCGTATGGTA+CGG | + | chr4.4:8579319-8579338 | None:intergenic | 50.0% |
| ! | TCATGTAACTGGTGGCTCTG+AGG | - | chr4.4:8582430-8582449 | MS.gene28445:intron | 50.0% |
| ! | TTCCTGTGGTGGAGATAGAC+AGG | - | chr4.4:8579620-8579639 | MS.gene28445:intron | 50.0% |
| !! | AGATCCCTTTTTCGCGACCT+TGG | - | chr4.4:8581196-8581215 | MS.gene28445:intron | 50.0% |
| !! | GCTTGAGTCTGGTATCGGTA+GGG | - | chr4.4:8580344-8580363 | MS.gene28445:intron | 50.0% |
| !! | TCTCTGAGACCATGAGAGTG+AGG | - | chr4.4:8580755-8580774 | MS.gene28445:intron | 50.0% |
| !! | TGACAGCACTGGCACAATTG+TGG | - | chr4.4:8581169-8581188 | MS.gene28445:intron | 50.0% |
| !! | TGCTTGAGTCTGGTATCGGT+AGG | - | chr4.4:8580343-8580362 | MS.gene28445:intron | 50.0% |
| AAACACCAACCCCTCCAGCA+AGG | + | chr4.4:8580448-8580467 | None:intergenic | 55.0% | |
| AACCCAGCACCAGTAGTGCA+AGG | + | chr4.4:8580571-8580590 | None:intergenic | 55.0% | |
| AACGTGCTCAAGGGTCACGA+AGG | - | chr4.4:8579233-8579252 | MS.gene28445:CDS | 55.0% | |
| AAGACCGTACCATACGCCTC+TGG | - | chr4.4:8579312-8579331 | MS.gene28445:intron | 55.0% | |
| ACCCAGCACCAGTAGTGCAA+GGG | + | chr4.4:8580570-8580589 | None:intergenic | 55.0% | |
| AGACTCTACCGTGCGTCTTC+TGG | - | chr4.4:8581842-8581861 | MS.gene28445:intron | 55.0% | |
| ATCCCTTGCACTACTGGTGC+TGG | - | chr4.4:8580565-8580584 | MS.gene28445:intron | 55.0% | |
| ATTGCAAGCTCGTGTTGCGG+TGG | + | chr4.4:8580292-8580311 | None:intergenic | 55.0% | |
| CTACCGTGCGTCTTCTGGAT+AGG | - | chr4.4:8581847-8581866 | MS.gene28445:intron | 55.0% | |
| CTCTTGATGGGGGATAACCG+CGG | - | chr4.4:8582662-8582681 | MS.gene28445:intron | 55.0% | |
| GAAGGAGGTGAACGTGCTCA+AGG | - | chr4.4:8579223-8579242 | MS.gene28445:CDS | 55.0% | |
| GATACCAGACTCAAGCACGG+AGG | + | chr4.4:8580340-8580359 | None:intergenic | 55.0% | |
| GCGAGGCACATCACACAACA+TGG | + | chr4.4:8579810-8579829 | None:intergenic | 55.0% | |
| GCGGTTATCCCCCATCAAGA+GGG | + | chr4.4:8582663-8582682 | None:intergenic | 55.0% | |
| GGAAGATCTTCCTCGGAAGG+AGG | - | chr4.4:8579208-8579227 | MS.gene28445:CDS | 55.0% | |
| GTACCTCACCATCATGGCCA+CGG | + | chr4.4:8579689-8579708 | None:intergenic | 55.0% | |
| TCCCTTGCACTACTGGTGCT+GGG | - | chr4.4:8580566-8580585 | MS.gene28445:intron | 55.0% | |
| TGTTTCCTTGCTGGAGGGGT+TGG | - | chr4.4:8580440-8580459 | MS.gene28445:intron | 55.0% | |
| TTCCACGGTGAGGATTCCAG+AGG | + | chr4.4:8579331-8579350 | None:intergenic | 55.0% | |
| TTTAGCTGGTGGCCTCTGCT+CGG | - | chr4.4:8580401-8580420 | MS.gene28445:intron | 55.0% | |
| ! | ATTCCGTGGCCATGATGGTG+AGG | - | chr4.4:8579683-8579702 | MS.gene28445:intron | 55.0% |
| ! | GTGAGGATTCCAGAGGCGTA+TGG | + | chr4.4:8579324-8579343 | None:intergenic | 55.0% |
| !! | CAGCACTGGCACAATTGTGG+TGG | - | chr4.4:8581172-8581191 | MS.gene28445:intron | 55.0% |
| !! | GTAACTGGTGGCTCTGAGGA+TGG | - | chr4.4:8582434-8582453 | MS.gene28445:intron | 55.0% |
| !! | GTAGGGTTTGTTGTGCGAGG+CGG | - | chr4.4:8580361-8580380 | MS.gene28445:intron | 55.0% |
| !! | TCGGTAGGGTTTGTTGTGCG+AGG | - | chr4.4:8580358-8580377 | MS.gene28445:intron | 55.0% |
| !! | TTTTGGGGGGCCGGTTTTTG+TGG | - | chr4.4:8580472-8580491 | MS.gene28445:intron | 55.0% |
| !!! | TTGCGTGGGGGTGTTTTAGC+TGG | - | chr4.4:8580387-8580406 | MS.gene28445:intron | 55.0% |
| AGCACGTTCACCTCCTTCCG+AGG | + | chr4.4:8579221-8579240 | None:intergenic | 60.0% | |
| ATCGCGAACTTCGCGGCCAT+GGG | + | chr4.4:8579375-8579394 | None:intergenic | 60.0% | |
| CGCGGTTATCCCCCATCAAG+AGG | + | chr4.4:8582664-8582683 | None:intergenic | 60.0% | |
| CGGTTCTCAAGGGGGTCCTT+TGG | - | chr4.4:8579962-8579981 | MS.gene28445:CDS | 60.0% | |
| CGTGGACATCGCGAACTTCG+CGG | + | chr4.4:8579382-8579401 | None:intergenic | 60.0% | |
| GTGCTCAAGGGTCACGAAGG+TGG | - | chr4.4:8579236-8579255 | MS.gene28445:CDS | 60.0% | |
| TCACCCTCCGTGCTTGAGTC+TGG | - | chr4.4:8580333-8580352 | MS.gene28445:intron | 60.0% | |
| TGGACTCCAGTGCCACCACA+AGG | - | chr4.4:8580190-8580209 | MS.gene28445:intron | 60.0% | |
| !!! | CGTGGGGGTGTTTTAGCTGG+TGG | - | chr4.4:8580390-8580409 | MS.gene28445:intron | 60.0% |
| CATCGCGAACTTCGCGGCCA+TGG | + | chr4.4:8579376-8579395 | None:intergenic | 65.0% | |
| GCCGCGAGGTTCAACTCCGA+CGG | - | chr4.4:8579266-8579285 | MS.gene28445:intron | 65.0% | |
| GCCGTCGGAGTTGAACCTCG+CGG | + | chr4.4:8579270-8579289 | None:intergenic | 65.0% | |
| GTCAGGCAAACGCCGAGCAG+AGG | + | chr4.4:8580416-8580435 | None:intergenic | 65.0% | |
| !! | CGCCTCTGGAATCCTCACCG+TGG | - | chr4.4:8579326-8579345 | MS.gene28445:intron | 65.0% |
| !! | GGGTTTGTTGTGCGAGGCGG+TGG | - | chr4.4:8580364-8580383 | MS.gene28445:intron | 65.0% |
| AAGGTGGCGTGCTTGCCGCG+AGG | - | chr4.4:8579252-8579271 | MS.gene28445:CDS | 70.0% | |
| GTGCGAGGCGGTGGTTGCGT+GGG | - | chr4.4:8580373-8580392 | MS.gene28445:intron | 70.0% | |
| TGCGAGGCGGTGGTTGCGTG+GGG | - | chr4.4:8580374-8580393 | MS.gene28445:intron | 70.0% | |
| TGTGCGAGGCGGTGGTTGCG+TGG | - | chr4.4:8580372-8580391 | MS.gene28445:intron | 70.0% | |
| GCGAGGCGGTGGTTGCGTGG+GGG | - | chr4.4:8580375-8580394 | MS.gene28445:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 8579200 | 8583281 | 8579200 | ID=MS.gene28445 |
| chr4.4 | mRNA | 8579200 | 8583281 | 8579200 | ID=MS.gene28445.t1;Parent=MS.gene28445 |
| chr4.4 | exon | 8583073 | 8583281 | 8583073 | ID=MS.gene28445.t1.exon1;Parent=MS.gene28445.t1 |
| chr4.4 | CDS | 8583073 | 8583281 | 8583073 | ID=cds.MS.gene28445.t1;Parent=MS.gene28445.t1 |
| chr4.4 | exon | 8582777 | 8582879 | 8582777 | ID=MS.gene28445.t1.exon2;Parent=MS.gene28445.t1 |
| chr4.4 | CDS | 8582777 | 8582879 | 8582777 | ID=cds.MS.gene28445.t1;Parent=MS.gene28445.t1 |
| chr4.4 | exon | 8581051 | 8581158 | 8581051 | ID=MS.gene28445.t1.exon3;Parent=MS.gene28445.t1 |
| chr4.4 | CDS | 8581051 | 8581158 | 8581051 | ID=cds.MS.gene28445.t1;Parent=MS.gene28445.t1 |
| chr4.4 | exon | 8580813 | 8580922 | 8580813 | ID=MS.gene28445.t1.exon4;Parent=MS.gene28445.t1 |
| chr4.4 | CDS | 8580813 | 8580922 | 8580813 | ID=cds.MS.gene28445.t1;Parent=MS.gene28445.t1 |
| chr4.4 | exon | 8580613 | 8580720 | 8580613 | ID=MS.gene28445.t1.exon5;Parent=MS.gene28445.t1 |
| chr4.4 | CDS | 8580613 | 8580720 | 8580613 | ID=cds.MS.gene28445.t1;Parent=MS.gene28445.t1 |
| chr4.4 | exon | 8580491 | 8580536 | 8580491 | ID=MS.gene28445.t1.exon6;Parent=MS.gene28445.t1 |
| chr4.4 | CDS | 8580491 | 8580536 | 8580491 | ID=cds.MS.gene28445.t1;Parent=MS.gene28445.t1 |
| chr4.4 | exon | 8579958 | 8580089 | 8579958 | ID=MS.gene28445.t1.exon7;Parent=MS.gene28445.t1 |
| chr4.4 | CDS | 8579958 | 8580089 | 8579958 | ID=cds.MS.gene28445.t1;Parent=MS.gene28445.t1 |
| chr4.4 | exon | 8579200 | 8579283 | 8579200 | ID=MS.gene28445.t1.exon8;Parent=MS.gene28445.t1 |
| chr4.4 | CDS | 8579200 | 8579283 | 8579200 | ID=cds.MS.gene28445.t1;Parent=MS.gene28445.t1 |
| Gene Sequence |
| Protein sequence |
