AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene018385

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene018385.t1 MTR_4g129335 95.652 184 5 3 1 183 1 182 1.35e-98 283
MS.gene018385.t1 MTR_4g129370 95.652 184 5 3 1 183 1 182 1.35e-98 283
MS.gene018385.t1 MTR_3g078120 33.099 142 82 4 29 159 1 140 7.73e-17 73.9
MS.gene018385.t1 MTR_6g007680 32.432 148 87 6 31 177 1 136 3.56e-14 67.0
MS.gene018385.t1 MTR_3g114500 36.207 116 67 4 33 147 5 114 3.56e-13 63.5
MS.gene018385.t1 MTR_2g041200 31.148 122 73 3 39 149 33 154 6.72e-13 63.9
MS.gene018385.t1 MTR_8g009190 34.307 137 72 4 26 149 19 150 7.19e-13 65.9
MS.gene018385.t1 MTR_4g063070 32.331 133 65 6 37 146 248 378 1.21e-12 65.5
MS.gene018385.t1 MTR_7g076250 34.667 75 48 1 81 154 66 140 1.84e-12 63.2
MS.gene018385.t1 MTR_2g055790 35.772 123 68 4 36 153 33 149 4.98e-12 62.0
MS.gene018385.t1 MTR_6g007670 38.462 91 49 2 64 153 137 221 5.07e-12 62.8
MS.gene018385.t1 MTR_5g064980 30.469 128 72 3 31 146 57 179 5.64e-12 63.5
MS.gene018385.t1 MTR_3g078470 40.845 71 40 1 84 152 82 152 8.68e-12 61.6
MS.gene018385.t1 MTR_4g106680 29.936 157 93 5 26 165 40 196 1.16e-11 62.4
MS.gene018385.t1 MTR_4g108830 42.424 66 37 1 84 149 155 219 1.43e-11 61.2
MS.gene018385.t1 MTR_5g064990 28.369 141 88 3 31 163 67 202 1.51e-11 62.4
MS.gene018385.t1 MTR_1g026070 33.043 115 70 3 33 146 5 113 1.65e-11 59.3
MS.gene018385.t1 MTR_7g116200 34.568 81 52 1 84 164 74 153 1.85e-11 60.1
MS.gene018385.t1 MTR_8g066740 31.206 141 84 5 29 159 22 159 1.91e-11 61.6
MS.gene018385.t1 MTR_4g108830 42.424 66 37 1 84 149 127 191 1.94e-11 60.5
MS.gene018385.t1 MTR_7g073200 35.065 77 50 0 82 158 85 161 2.10e-11 60.1
MS.gene018385.t1 MTR_8g073120 30.579 121 78 3 34 148 22 142 2.49e-11 60.5
MS.gene018385.t1 MTR_3g110190 30.769 130 85 3 27 152 12 140 2.74e-11 61.2
MS.gene018385.t1 MTR_5g076990 31.613 155 95 5 3 151 4 153 2.84e-11 61.2
MS.gene018385.t1 MTR_1g492830 26.241 141 100 1 21 157 1 141 3.39e-11 60.1
MS.gene018385.t1 MTR_4g120270 41.772 79 42 2 84 162 86 160 4.01e-11 60.5
MS.gene018385.t1 MTR_7g096690 29.932 147 83 5 22 154 10 150 4.25e-11 60.8
MS.gene018385.t1 MTR_8g066780 31.288 163 75 8 11 153 47 192 5.48e-11 60.5
MS.gene018385.t1 MTR_4g030070 34.940 83 54 0 74 156 80 162 5.55e-11 59.7
MS.gene018385.t1 MTR_2g436100 39.394 99 57 2 84 179 99 197 5.77e-11 60.1
MS.gene018385.t1 MTR_7g116220 38.806 67 38 1 84 147 76 142 6.51e-11 58.9
MS.gene018385.t1 MTR_2g090905 36.585 82 46 1 81 156 42 123 6.81e-11 57.4
MS.gene018385.t1 MTR_2g035800 40.000 80 48 0 82 161 80 159 7.72e-11 58.2
MS.gene018385.t1 MTR_5g092750 46.939 49 26 0 101 149 182 230 7.74e-11 59.3
MS.gene018385.t1 MTR_5g022920 30.702 114 58 2 54 146 118 231 7.90e-11 59.3
MS.gene018385.t1 MTR_8g089880 36.250 80 51 0 84 163 133 212 8.07e-11 59.7
MS.gene018385.t1 MTR_3g464780 40.278 72 42 1 99 170 127 197 8.15e-11 59.7
MS.gene018385.t1 MTR_3g099650 32.283 127 67 5 30 146 61 178 9.30e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene018385.t1 AT2G18670 40.252 159 82 3 16 173 24 170 2.01e-32 115
MS.gene018385.t1 AT4G30370 39.231 130 78 1 20 149 32 160 1.07e-25 97.4
MS.gene018385.t1 AT2G17450 30.872 149 84 6 15 152 13 153 2.12e-14 68.2
MS.gene018385.t1 AT2G42360 33.333 150 93 4 17 160 20 168 2.45e-14 68.9
MS.gene018385.t1 AT4G09100 31.707 123 65 4 39 149 15 130 6.16e-14 65.9
MS.gene018385.t1 AT3G10910 26.437 174 110 3 4 165 7 174 1.14e-13 66.2
MS.gene018385.t1 AT3G20395 41.096 73 41 1 84 156 153 223 5.51e-13 65.1
MS.gene018385.t1 AT2G27940 35.227 88 49 2 84 164 121 207 1.28e-12 64.3
MS.gene018385.t1 AT3G62690 41.333 75 43 1 81 155 90 163 2.11e-12 63.9
MS.gene018385.t1 AT4G10150 27.152 151 98 2 8 146 3 153 2.54e-12 63.5
MS.gene018385.t1 AT5G42200 30.303 132 77 3 29 152 28 152 2.86e-12 62.0
MS.gene018385.t1 AT3G61460 31.973 147 82 4 42 178 23 161 2.89e-12 62.4
MS.gene018385.t1 AT5G01880 34.091 88 56 1 61 146 60 147 5.26e-12 61.2
MS.gene018385.t1 AT5G05280 44.828 58 32 0 102 159 111 168 8.13e-12 61.2
MS.gene018385.t1 AT5G27420 28.049 164 104 4 9 164 26 183 8.96e-12 62.8
MS.gene018385.t1 AT4G10160 35.443 79 51 0 68 146 61 139 2.13e-11 60.8
MS.gene018385.t1 AT3G05200 28.485 165 100 5 6 162 30 184 2.66e-11 61.6
MS.gene018385.t1 AT1G63840 34.884 129 67 6 32 147 10 134 4.66e-11 58.9
MS.gene018385.t1 AT5G66070 33.036 112 54 2 54 146 109 218 7.29e-11 59.3
MS.gene018385.t1 AT5G66070 33.036 112 54 2 54 146 109 218 7.29e-11 59.3
MS.gene018385.t1 AT2G17730 31.818 132 65 3 43 149 110 241 7.62e-11 59.7

Find 75 sgRNAs with CRISPR-Local

Find 77 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGAAGGTTCTTCACGATTT+TGG 0.131959 8.2:+5025387 MS.gene018385:CDS
GGAAAAGGGAGAGGAGATTA+GGG 0.247255 8.2:-5024950 None:intergenic
AGGAAAAGGGAGAGGAGATT+AGG 0.279449 8.2:-5024951 None:intergenic
AGGAGATTAGGGTTTGGTTT+TGG 0.298382 8.2:-5024939 None:intergenic
TTCAGGATCGCCATGGTGTT+GGG 0.309331 8.2:-5024910 None:intergenic
TTCTCGTTGTGCTGTTTGTT+TGG 0.334977 8.2:+5025199 MS.gene018385:CDS
TATTGATACCTGGCTTCTTA+AGG 0.367630 8.2:+5025289 MS.gene018385:CDS
TCCCTCTTCTTTCTCTTCCT+CGG 0.367925 8.2:+5025002 MS.gene018385:CDS
TGATGATGGGTTTGAGGAAA+AGG 0.391533 8.2:-5024965 None:intergenic
TCAACAACCTCCCCAACTTC+AGG 0.402288 8.2:+5025147 MS.gene018385:CDS
TCACAAGCTATTATTACAAA+AGG 0.402643 8.2:-5025439 None:intergenic
ACAAACAGCACAACGAGAAT+CGG 0.409644 8.2:-5025195 None:intergenic
AGGGAGAGGAGATTAGGGTT+TGG 0.413011 8.2:-5024945 None:intergenic
GACGGAAACGGAGGCGGTGG+AGG 0.416739 8.2:-5025070 None:intergenic
ACCTTTGGTGATCCTGAAGT+TGG 0.427443 8.2:-5025159 None:intergenic
CCTTTGGTGATCCTGAAGTT+GGG 0.434550 8.2:-5025158 None:intergenic
TAGGACGGAAACGGAGGCGG+TGG 0.438475 8.2:-5025073 None:intergenic
CGTTGTGCTGTTTGTTTGGA+CGG 0.442179 8.2:+5025203 MS.gene018385:CDS
GAAGAGGTTGAGGAGGAGAA+AGG 0.454979 8.2:-5025033 None:intergenic
GGGTTCAGAAACGGAACCTT+TGG 0.469591 8.2:-5025174 None:intergenic
ACGGAGGCGGTGGAGGGCGC+CGG 0.472988 8.2:-5025063 None:intergenic
CGGCTAAGAGGAAGAGGTTG+AGG 0.481229 8.2:-5025043 None:intergenic
ACGAGAATCGGGTTCAGAAA+CGG 0.482086 8.2:-5025183 None:intergenic
GTTCAGGATCGCCATGGTGT+TGG 0.482441 8.2:-5024911 None:intergenic
GAAGCATGATGATGGGTTTG+AGG 0.492199 8.2:-5024971 None:intergenic
TGTGAGGAGAAGCATGATGA+TGG 0.495135 8.2:-5024979 None:intergenic
CAAACAGCACAACGAGAATC+GGG 0.497987 8.2:-5025194 None:intergenic
GGTGGAGGGCGCCGGCTAAG+AGG 0.499890 8.2:-5025055 None:intergenic
GGTTGAGCGTTGGACCGAAC+CGG 0.501540 8.2:-5025338 None:intergenic
CTCAACCTCTTCCTCTTAGC+CGG 0.507892 8.2:+5025044 MS.gene018385:CDS
GATGATGGGTTTGAGGAAAA+GGG 0.516706 8.2:-5024964 None:intergenic
AGAGAAAGAAGAGGGATGTG+AGG 0.517778 8.2:-5024995 None:intergenic
CACAAGCTATTATTACAAAA+GGG 0.519132 8.2:-5025438 None:intergenic
ATCGGAGATGTATTGATACC+TGG 0.519657 8.2:+5025279 MS.gene018385:CDS
ACGGAAACGGAGGCGGTGGA+GGG 0.523526 8.2:-5025069 None:intergenic
TGGGTTTGAGGAAAAGGGAG+AGG 0.528031 8.2:-5024959 None:intergenic
CTACTTGCCGTACACCGGTT+CGG 0.530310 8.2:+5025324 MS.gene018385:CDS
GAGTAGGACGGAAACGGAGG+CGG 0.531377 8.2:-5025076 None:intergenic
GGGCGCCGGCTAAGAGGAAG+AGG 0.535078 8.2:-5025049 None:intergenic
GGAGAAAGGCGGCGAAACCG+AGG 0.539177 8.2:-5025019 None:intergenic
TGAAGACGGCGGGTTGGAGT+AGG 0.545882 8.2:-5025092 None:intergenic
CGTTGGACCGAACCGGTGTA+CGG 0.546340 8.2:-5025331 None:intergenic
AGAGATTGAAGACGGCGGGT+TGG 0.551380 8.2:-5025098 None:intergenic
ACCTTGTGAAGGTTGAGCGT+TGG 0.552196 8.2:-5025348 None:intergenic
CTTTGGTGATCCTGAAGTTG+GGG 0.553407 8.2:-5025157 None:intergenic
GGTGAGAGATTGAAGACGGC+GGG 0.556894 8.2:-5025102 None:intergenic
TCAGTTGTAGAACAAGATGA+AGG 0.562417 8.2:+5025371 MS.gene018385:CDS
GGGAGGTTGTTGATTTCGCG+AGG 0.564332 8.2:-5025137 None:intergenic
CCATGGTGTTGGGGATGAGA+AGG 0.567157 8.2:-5024900 None:intergenic
GGGTTGGAGTAGGACGGAAA+CGG 0.569430 8.2:-5025082 None:intergenic
CGAACCGGTGTACGGCAAGT+AGG 0.574174 8.2:-5025323 None:intergenic
TGGTGATCCTGAAGTTGGGG+AGG 0.587257 8.2:-5025154 None:intergenic
CGTGGCAACCTTAAGAAGCC+AGG 0.587413 8.2:-5025297 None:intergenic
GGTTGTTGATTTCGCGAGGG+AGG 0.591963 8.2:-5025133 None:intergenic
CTAAGAGGAAGAGGTTGAGG+AGG 0.593800 8.2:-5025040 None:intergenic
GTGTCCTACTTGCCGTACAC+CGG 0.602666 8.2:+5025319 MS.gene018385:CDS
GTTGTTGTTCAGGATCGCCA+TGG 0.605538 8.2:-5024917 None:intergenic
GTGAGGAGAAGCATGATGAT+GGG 0.607789 8.2:-5024978 None:intergenic
ACCGAGGAAGAGAAAGAAGA+GGG 0.608693 8.2:-5025003 None:intergenic
AACCGAGGAAGAGAAAGAAG+AGG 0.612058 8.2:-5025004 None:intergenic
TCAGGATCGCCATGGTGTTG+GGG 0.615546 8.2:-5024909 None:intergenic
CCCAACTTCAGGATCACCAA+AGG 0.637688 8.2:+5025158 MS.gene018385:CDS
GTGTTGGGGATGAGAAGGCA+TGG 0.640252 8.2:-5024895 None:intergenic
TCTACAACTGAACCTTGTGA+AGG 0.645718 8.2:-5025359 None:intergenic
CGTCGGTGAGAGATTGAAGA+CGG 0.651070 8.2:-5025106 None:intergenic
TTGGAGTAGGACGGAAACGG+AGG 0.653534 8.2:-5025079 None:intergenic
GAGGTTGAGGAGGAGAAAGG+CGG 0.653553 8.2:-5025030 None:intergenic
CCTTCTCATCCCCAACACCA+TGG 0.654904 8.2:+5024900 MS.gene018385:CDS
GGAGGTTGTTGATTTCGCGA+GGG 0.655842 8.2:-5025136 None:intergenic
TTCGCGAGGGAGGAAAGCGT+CGG 0.671242 8.2:-5025123 None:intergenic
TGTAGAAATCTCGCTGCCTG+TGG 0.675543 8.2:+5025245 MS.gene018385:CDS
GACGGCGGGTTGGAGTAGGA+CGG 0.677108 8.2:-5025088 None:intergenic
CGGTGAGAGATTGAAGACGG+CGG 0.681981 8.2:-5025103 None:intergenic
TCCAACGCTCAACCTTCACA+AGG 0.693145 8.2:+5025347 MS.gene018385:CDS
TGTACGGCAAGTAGGACACG+TGG 0.730422 8.2:-5025315 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
TATTGATACCTGGCTTCTTA+AGG + chr8.2:5025289-5025308 MS.gene018385:CDS 35.0%
TCAGTTGTAGAACAAGATGA+AGG + chr8.2:5025371-5025390 MS.gene018385:CDS 35.0%
! ATGAAGGTTCTTCACGATTT+TGG + chr8.2:5025387-5025406 MS.gene018385:CDS 35.0%
!!! TTTGGTTTTGGTTGTTGTTC+AGG - chr8.2:5024930-5024949 None:intergenic 35.0%
ACAAACAGCACAACGAGAAT+CGG - chr8.2:5025198-5025217 None:intergenic 40.0%
TCTACAACTGAACCTTGTGA+AGG - chr8.2:5025362-5025381 None:intergenic 40.0%
! ACGGTTTTCGTAATGGTCAA+TGG + chr8.2:5025222-5025241 MS.gene018385:CDS 40.0%
! ATCGGAGATGTATTGATACC+TGG + chr8.2:5025279-5025298 MS.gene018385:CDS 40.0%
! CCTGTGGTCATGTTTTTCAT+CGG + chr8.2:5025261-5025280 MS.gene018385:CDS 40.0%
! TGTTTGGACGGTTTTCGTAA+TGG + chr8.2:5025215-5025234 MS.gene018385:CDS 40.0%
!! AGGAGATTAGGGTTTGGTTT+TGG - chr8.2:5024942-5024961 None:intergenic 40.0%
!! GATGATGGGTTTGAGGAAAA+GGG - chr8.2:5024967-5024986 None:intergenic 40.0%
!! TGATGATGGGTTTGAGGAAA+AGG - chr8.2:5024968-5024987 None:intergenic 40.0%
!! TTCTCGTTGTGCTGTTTGTT+TGG + chr8.2:5025199-5025218 MS.gene018385:CDS 40.0%
AACCGAGGAAGAGAAAGAAG+AGG - chr8.2:5025007-5025026 None:intergenic 45.0%
ACCGAGGAAGAGAAAGAAGA+GGG - chr8.2:5025006-5025025 None:intergenic 45.0%
ACGAGAATCGGGTTCAGAAA+CGG - chr8.2:5025186-5025205 None:intergenic 45.0%
AGAGAAAGAAGAGGGATGTG+AGG - chr8.2:5024998-5025017 None:intergenic 45.0%
AGGAAAAGGGAGAGGAGATT+AGG - chr8.2:5024954-5024973 None:intergenic 45.0%
CAAACAGCACAACGAGAATC+GGG - chr8.2:5025197-5025216 None:intergenic 45.0%
CCGATGAAAAACATGACCAC+AGG - chr8.2:5025264-5025283 None:intergenic 45.0%
GGAAAAGGGAGAGGAGATTA+GGG - chr8.2:5024953-5024972 None:intergenic 45.0%
TCCCTCTTCTTTCTCTTCCT+CGG + chr8.2:5025002-5025021 MS.gene018385:CDS 45.0%
! ACCTTTGGTGATCCTGAAGT+TGG - chr8.2:5025162-5025181 None:intergenic 45.0%
! CCTTTGGTGATCCTGAAGTT+GGG - chr8.2:5025161-5025180 None:intergenic 45.0%
! CTTTGGTGATCCTGAAGTTG+GGG - chr8.2:5025160-5025179 None:intergenic 45.0%
! GTGAGGAGAAGCATGATGAT+GGG - chr8.2:5024981-5025000 None:intergenic 45.0%
! TGTGAGGAGAAGCATGATGA+TGG - chr8.2:5024982-5025001 None:intergenic 45.0%
!! CGTTGTGCTGTTTGTTTGGA+CGG + chr8.2:5025203-5025222 MS.gene018385:CDS 45.0%
!! GAAGCATGATGATGGGTTTG+AGG - chr8.2:5024974-5024993 None:intergenic 45.0%
ACCTTGTGAAGGTTGAGCGT+TGG - chr8.2:5025351-5025370 None:intergenic 50.0%
AGGGAGAGGAGATTAGGGTT+TGG - chr8.2:5024948-5024967 None:intergenic 50.0%
CCCAACTTCAGGATCACCAA+AGG + chr8.2:5025158-5025177 MS.gene018385:CDS 50.0%
CGTCGGTGAGAGATTGAAGA+CGG - chr8.2:5025109-5025128 None:intergenic 50.0%
CTAAGAGGAAGAGGTTGAGG+AGG - chr8.2:5025043-5025062 None:intergenic 50.0%
CTCAACCTCTTCCTCTTAGC+CGG + chr8.2:5025044-5025063 MS.gene018385:CDS 50.0%
GAAGAGGTTGAGGAGGAGAA+AGG - chr8.2:5025036-5025055 None:intergenic 50.0%
GGGTTCAGAAACGGAACCTT+TGG - chr8.2:5025177-5025196 None:intergenic 50.0%
TCAACAACCTCCCCAACTTC+AGG + chr8.2:5025147-5025166 MS.gene018385:CDS 50.0%
TCCAACGCTCAACCTTCACA+AGG + chr8.2:5025347-5025366 MS.gene018385:CDS 50.0%
TGGGTTTGAGGAAAAGGGAG+AGG - chr8.2:5024962-5024981 None:intergenic 50.0%
TGTAGAAATCTCGCTGCCTG+TGG + chr8.2:5025245-5025264 MS.gene018385:CDS 50.0%
TTCAGGATCGCCATGGTGTT+GGG - chr8.2:5024913-5024932 None:intergenic 50.0%
! GTTGTTGTTCAGGATCGCCA+TGG - chr8.2:5024920-5024939 None:intergenic 50.0%
!! GGAGGTTGTTGATTTCGCGA+GGG - chr8.2:5025139-5025158 None:intergenic 50.0%
AGAGATTGAAGACGGCGGGT+TGG - chr8.2:5025101-5025120 None:intergenic 55.0%
CCTTCTCATCCCCAACACCA+TGG + chr8.2:5024900-5024919 MS.gene018385:CDS 55.0%
CGGCTAAGAGGAAGAGGTTG+AGG - chr8.2:5025046-5025065 None:intergenic 55.0%
CGGTGAGAGATTGAAGACGG+CGG - chr8.2:5025106-5025125 None:intergenic 55.0%
CGTGGCAACCTTAAGAAGCC+AGG - chr8.2:5025300-5025319 None:intergenic 55.0%
GAGGTTGAGGAGGAGAAAGG+CGG - chr8.2:5025033-5025052 None:intergenic 55.0%
GGGTTGGAGTAGGACGGAAA+CGG - chr8.2:5025085-5025104 None:intergenic 55.0%
GGTGAGAGATTGAAGACGGC+GGG - chr8.2:5025105-5025124 None:intergenic 55.0%
GTGTCCTACTTGCCGTACAC+CGG + chr8.2:5025319-5025338 MS.gene018385:CDS 55.0%
GTTCAGGATCGCCATGGTGT+TGG - chr8.2:5024914-5024933 None:intergenic 55.0%
TGGTGATCCTGAAGTTGGGG+AGG - chr8.2:5025157-5025176 None:intergenic 55.0%
TGTACGGCAAGTAGGACACG+TGG - chr8.2:5025318-5025337 None:intergenic 55.0%
TTGGAGTAGGACGGAAACGG+AGG - chr8.2:5025082-5025101 None:intergenic 55.0%
! CCATGGTGTTGGGGATGAGA+AGG - chr8.2:5024903-5024922 None:intergenic 55.0%
! CTACTTGCCGTACACCGGTT+CGG + chr8.2:5025324-5025343 MS.gene018385:CDS 55.0%
! TCAGGATCGCCATGGTGTTG+GGG - chr8.2:5024912-5024931 None:intergenic 55.0%
!! GGGAGGTTGTTGATTTCGCG+AGG - chr8.2:5025140-5025159 None:intergenic 55.0%
!! GGTTGTTGATTTCGCGAGGG+AGG - chr8.2:5025136-5025155 None:intergenic 55.0%
CGAACCGGTGTACGGCAAGT+AGG - chr8.2:5025326-5025345 None:intergenic 60.0%
CGTTGGACCGAACCGGTGTA+CGG - chr8.2:5025334-5025353 None:intergenic 60.0%
GAGTAGGACGGAAACGGAGG+CGG - chr8.2:5025079-5025098 None:intergenic 60.0%
! TTCGCGAGGGAGGAAAGCGT+CGG - chr8.2:5025126-5025145 None:intergenic 60.0%
!! GGTTGAGCGTTGGACCGAAC+CGG - chr8.2:5025341-5025360 None:intergenic 60.0%
!! TGAAGACGGCGGGTTGGAGT+AGG - chr8.2:5025095-5025114 None:intergenic 60.0%
ACGGAAACGGAGGCGGTGGA+GGG - chr8.2:5025072-5025091 None:intergenic 65.0%
GGAGAAAGGCGGCGAAACCG+AGG - chr8.2:5025022-5025041 None:intergenic 65.0%
TAGGACGGAAACGGAGGCGG+TGG - chr8.2:5025076-5025095 None:intergenic 65.0%
!! GACGGCGGGTTGGAGTAGGA+CGG - chr8.2:5025091-5025110 None:intergenic 65.0%
GACGGAAACGGAGGCGGTGG+AGG - chr8.2:5025073-5025092 None:intergenic 70.0%
!! GGGCGCCGGCTAAGAGGAAG+AGG - chr8.2:5025052-5025071 None:intergenic 70.0%
!! GGTGGAGGGCGCCGGCTAAG+AGG - chr8.2:5025058-5025077 None:intergenic 75.0%
!! ACGGAGGCGGTGGAGGGCGC+CGG - chr8.2:5025066-5025085 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 5024897 5025448 5024897 ID=MS.gene018385
chr8.2 mRNA 5024897 5025448 5024897 ID=MS.gene018385.t1;Parent=MS.gene018385
chr8.2 exon 5024897 5025448 5024897 ID=MS.gene018385.t1.exon1;Parent=MS.gene018385.t1
chr8.2 CDS 5024897 5025448 5024897 ID=cds.MS.gene018385.t1;Parent=MS.gene018385.t1
Gene Sequence

>MS.gene018385

ATGCCTTCTCATCCCCAACACCATGGCGATCCTGAACAACAACCAAAACCAAACCCTAATCTCCTCTCCCTTTTCCTCAAACCCATCATCATGCTTCTCCTCACATCCCTCTTCTTTCTCTTCCTCGGTTTCGCCGCCTTTCTCCTCCTCAACCTCTTCCTCTTAGCCGGCGCCCTCCACCGCCTCCGTTTCCGTCCTACTCCAACCCGCCGTCTTCAATCTCTCACCGACGCTTTCCTCCCTCGCGAAATCAACAACCTCCCCAACTTCAGGATCACCAAAGGTTCCGTTTCTGAACCCGATTCTCGTTGTGCTGTTTGTTTGGACGGTTTTCGTAATGGTCAATGGTGTAGAAATCTCGCTGCCTGTGGTCATGTTTTTCATCGGAGATGTATTGATACCTGGCTTCTTAAGGTTGCCACGTGTCCTACTTGCCGTACACCGGTTCGGTCCAACGCTCAACCTTCACAAGGTTCAGTTGTAGAACAAGATGAAGGTTCTTCACGATTTTGGAATTGCTCTAATAACAACAATCGTTTCACCCTTTTGTAA
Protein sequence

>MS.gene018385.t1

MPSHPQHHGDPEQQPKPNPNLLSLFLKPIIMLLLTSLFFLFLGFAAFLLLNLFLLAGALHRLRFRPTPTRRLQSLTDAFLPREINNLPNFRITKGSVSEPDSRCAVCLDGFRNGQWCRNLAACGHVFHRRCIDTWLLKVATCPTCRTPVRSNAQPSQGSVVEQDEGSSRFWNCSNNNNRFTLL