Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019169.t1 | XP_013459635.1 | 98.5 | 274 | 4 | 0 | 1 | 274 | 1 | 274 | 7.40E-143 | 516.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019169.t1 | Q6PGS5 | 29.7 | 232 | 144 | 8 | 53 | 273 | 25 | 248 | 4.1e-17 | 90.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019169.t1 | A0A072UW60 | 98.5 | 274 | 4 | 0 | 1 | 274 | 1 | 274 | 5.3e-143 | 516.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene049621 | MS.gene019169 | PPI |
| MS.gene008402 | MS.gene019169 | PPI |
| MS.gene55688 | MS.gene019169 | PPI |
| MS.gene05093 | MS.gene019169 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019169.t1 | MTR_3g450410 | 98.540 | 274 | 4 | 0 | 1 | 274 | 1 | 274 | 0.0 | 553 |
| MS.gene019169.t1 | MTR_5g090550 | 82.117 | 274 | 49 | 0 | 1 | 274 | 1 | 274 | 8.78e-166 | 460 |
| MS.gene019169.t1 | MTR_3g063070 | 46.250 | 240 | 129 | 0 | 35 | 274 | 22 | 261 | 1.56e-76 | 233 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019169.t1 | AT4G19645 | 67.164 | 268 | 87 | 1 | 8 | 274 | 1 | 268 | 2.67e-135 | 383 |
| MS.gene019169.t1 | AT4G19645 | 67.164 | 268 | 87 | 1 | 8 | 274 | 1 | 268 | 2.67e-135 | 383 |
| MS.gene019169.t1 | AT4G19645 | 67.164 | 268 | 87 | 1 | 8 | 274 | 1 | 268 | 2.67e-135 | 383 |
| MS.gene019169.t1 | AT4G19645 | 67.164 | 268 | 87 | 1 | 8 | 274 | 1 | 268 | 2.67e-135 | 383 |
| MS.gene019169.t1 | AT4G19645 | 67.164 | 268 | 87 | 1 | 8 | 274 | 1 | 268 | 2.67e-135 | 383 |
| MS.gene019169.t1 | AT1G31300 | 66.415 | 265 | 89 | 0 | 9 | 273 | 11 | 275 | 9.22e-132 | 374 |
| MS.gene019169.t1 | AT1G31300 | 66.415 | 265 | 89 | 0 | 9 | 273 | 11 | 275 | 9.22e-132 | 374 |
| MS.gene019169.t1 | AT1G31300 | 66.415 | 265 | 89 | 0 | 9 | 273 | 11 | 275 | 9.22e-132 | 374 |
| MS.gene019169.t1 | AT4G10360 | 48.750 | 240 | 123 | 0 | 35 | 274 | 20 | 259 | 9.03e-86 | 257 |
| MS.gene019169.t1 | AT4G10360 | 48.750 | 240 | 123 | 0 | 35 | 274 | 20 | 259 | 9.03e-86 | 257 |
| MS.gene019169.t1 | AT4G10360 | 48.750 | 240 | 123 | 0 | 35 | 274 | 20 | 259 | 9.03e-86 | 257 |
Find 56 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCCATATACTTCTGTTAT+TGG | 0.196404 | 3.3:-37040931 | MS.gene019169:CDS |
| CATTGTCAACATTTGCATTA+GGG | 0.232110 | 3.3:-37040489 | MS.gene019169:CDS |
| TATGATCTTACTCAACTTAT+TGG | 0.254801 | 3.3:-37040776 | MS.gene019169:CDS |
| TCATTGTCAACATTTGCATT+AGG | 0.259607 | 3.3:-37040490 | MS.gene019169:CDS |
| CGAACAAATTAGCCTGATTC+TGG | 0.266465 | 3.3:+37040983 | None:intergenic |
| GAAGAGCTTCGAACTGTAAT+AGG | 0.311254 | 3.3:+37040511 | None:intergenic |
| GTAAACGAACAGAAGTATTC+TGG | 0.370676 | 3.3:+37038145 | None:intergenic |
| TGGTTCGCAAAGATCGTTAG+AGG | 0.376846 | 3.3:-37036881 | MS.gene019169:CDS |
| CCCATTGATGAGATAAGCTT+TGG | 0.385071 | 3.3:+37038714 | None:intergenic |
| GCTCGAATCTTACCAGAATC+AGG | 0.386672 | 3.3:-37040995 | MS.gene019169:CDS |
| CCACCAATAACAGAAGTATA+TGG | 0.388555 | 3.3:+37040928 | None:intergenic |
| GTTGAGAAAATGCACATCAT+TGG | 0.402546 | 3.3:-37036956 | MS.gene019169:CDS |
| TACCATCTCAAATTGATTCC+CGG | 0.415755 | 3.3:+37039133 | None:intergenic |
| CCAAAGCTTATCTCATCAAT+GGG | 0.429340 | 3.3:-37038714 | MS.gene019169:CDS |
| ATCTCTGAGGCAACTACTCC+GGG | 0.435198 | 3.3:-37039151 | MS.gene019169:CDS |
| TCCAAAGCTTATCTCATCAA+TGG | 0.440866 | 3.3:-37038715 | MS.gene019169:CDS |
| CCATATACTTCTGTTATTGG+TGG | 0.445086 | 3.3:-37040928 | MS.gene019169:CDS |
| TGTAATATTCCTTGCTTGGA+TGG | 0.447077 | 3.3:-37038689 | MS.gene019169:intron |
| GAGTAGTTGCCTCAGAGATT+AGG | 0.456957 | 3.3:+37039155 | None:intergenic |
| TATCTGTCATGAACCTGGTT+TGG | 0.458120 | 3.3:-37036901 | MS.gene019169:CDS |
| TTGAGAAAATGCACATCATT+GGG | 0.461302 | 3.3:-37036955 | MS.gene019169:CDS |
| AACGTATTGAGTGGAATAAC+CGG | 0.465078 | 3.3:-37040712 | MS.gene019169:intron |
| TGGCATGTTTGCTTGCAAAC+TGG | 0.469547 | 3.3:-37040908 | MS.gene019169:intron |
| CTGTAATAGGATCGGTAGAT+TGG | 0.475660 | 3.3:+37040524 | None:intergenic |
| ATTGATAATTGTTGTGCCTA+TGG | 0.481976 | 3.3:-37036927 | MS.gene019169:CDS |
| TATTCAATGTTGAGCGGGGA+AGG | 0.489055 | 3.3:-37039199 | MS.gene019169:CDS |
| AGTATATGGAATAAAAGAAT+CGG | 0.492136 | 3.3:+37040942 | None:intergenic |
| TAGCATATTCAATGTTGAGC+GGG | 0.497660 | 3.3:-37039204 | MS.gene019169:CDS |
| CGATCTTTGCGAACCAAACC+AGG | 0.501339 | 3.3:+37036888 | None:intergenic |
| GGGTTGTAATATTCCTTGCT+TGG | 0.504045 | 3.3:-37038693 | MS.gene019169:CDS |
| AATCTCTGAGGCAACTACTC+CGG | 0.515023 | 3.3:-37039152 | MS.gene019169:CDS |
| TCGATGTAGCTGGTATGAAA+AGG | 0.530241 | 3.3:-37038738 | MS.gene019169:CDS |
| TGAAGGTATCTCGATGTAGC+TGG | 0.530510 | 3.3:-37038748 | MS.gene019169:intron |
| ATTGTCAACATTTGCATTAG+GGG | 0.531353 | 3.3:-37040488 | MS.gene019169:intron |
| TCAGGCTAATTTGTTCGTGA+AGG | 0.543800 | 3.3:-37040977 | MS.gene019169:CDS |
| GGTGCTATCTGTCATGAACC+TGG | 0.548421 | 3.3:-37036906 | MS.gene019169:CDS |
| TAGTTACCTGATCAAAATGC+AGG | 0.552272 | 3.3:+37038105 | None:intergenic |
| GATCAAAATGCAGGTATACA+TGG | 0.559510 | 3.3:+37038114 | None:intergenic |
| TTGTTGTGACAGGTTTCGGT+TGG | 0.559751 | 3.3:-37039436 | MS.gene019169:intron |
| CAAAGATCGTTAGAGGCTTG+AGG | 0.567824 | 3.3:-37036874 | MS.gene019169:CDS |
| GGTTATTCCACTCAATACGT+TGG | 0.568185 | 3.3:+37040714 | None:intergenic |
| CGAAAATCCAACGTATTGAG+TGG | 0.569693 | 3.3:-37040721 | MS.gene019169:CDS |
| ATTCAATGTTGAGCGGGGAA+GGG | 0.589083 | 3.3:-37039198 | MS.gene019169:CDS |
| TAGAGGCTTGAGGAAGACAT+TGG | 0.589481 | 3.3:-37036864 | MS.gene019169:CDS |
| CTCCGGGAATCAATTTGAGA+TGG | 0.590813 | 3.3:-37039135 | MS.gene019169:intron |
| AACAACTATGTCATTATACA+TGG | 0.593875 | 3.3:-37040575 | MS.gene019169:CDS |
| TGAGGAAGACATTGGCAAAG+AGG | 0.602229 | 3.3:-37036856 | MS.gene019169:CDS |
| GCTTCGAACTGTAATAGGAT+CGG | 0.610862 | 3.3:+37040516 | None:intergenic |
| TTTAACCCACCATCCAAGCA+AGG | 0.626280 | 3.3:+37038680 | None:intergenic |
| TACTCATATCCACCAAGAGA+AGG | 0.629716 | 3.3:+37039373 | None:intergenic |
| AGGGCAGCTTTACACATACA+TGG | 0.641473 | 3.3:-37039179 | MS.gene019169:CDS |
| TTCATGACAGATAGCACCAT+AGG | 0.645212 | 3.3:+37036911 | None:intergenic |
| AGCATATTCAATGTTGAGCG+GGG | 0.660869 | 3.3:-37039203 | MS.gene019169:CDS |
| GTAGCATATTCAATGTTGAG+CGG | 0.687821 | 3.3:-37039205 | MS.gene019169:CDS |
| ATACATGGTCCTAATCTCTG+AGG | 0.715652 | 3.3:-37039164 | MS.gene019169:CDS |
| CAAAGCTTATCTCATCAATG+GGG | 0.751977 | 3.3:-37038713 | MS.gene019169:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTAATATATAATTATAACT+TGG | - | chr3.3:37039291-37039310 | MS.gene019169:intron | 10.0% |
| !!! | ATTTTAAAATTCAACTATAA+GGG | + | chr3.3:37038770-37038789 | None:intergenic | 10.0% |
| !!! | GTAAAAAAAAATTTTGTTTT+TGG | - | chr3.3:37039368-37039387 | MS.gene019169:intron | 10.0% |
| !! | TAAAAATAAATCTGCTAATA+AGG | - | chr3.3:37037632-37037651 | MS.gene019169:intron | 15.0% |
| !! | TCATGCAAAAAAAAAAAAAA+TGG | + | chr3.3:37037903-37037922 | None:intergenic | 15.0% |
| !!! | AAAAAACAAAAAATTTTGCA+GGG | - | chr3.3:37039571-37039590 | MS.gene019169:intron | 15.0% |
| !!! | AAAAAACAAAATATTTTGCA+GGG | - | chr3.3:37039469-37039488 | MS.gene019169:intron | 15.0% |
| !!! | AAAAACAAAAAATTTTTGCA+AGG | + | chr3.3:37039395-37039414 | None:intergenic | 15.0% |
| !!! | AAAAGATATATTTCTATCAA+TGG | + | chr3.3:37037198-37037217 | None:intergenic | 15.0% |
| !!! | AAACAAAATTTTTTTTTACC+AGG | + | chr3.3:37039367-37039386 | None:intergenic | 15.0% |
| !!! | AACAAAATTTTTTTTTACCA+GGG | + | chr3.3:37039366-37039385 | None:intergenic | 15.0% |
| !!! | AACAATTTTTTTTTTTTACC+AGG | - | chr3.3:37039600-37039619 | MS.gene019169:intron | 15.0% |
| !!! | ACAATTTTTTTTTTTTACCA+GGG | - | chr3.3:37039601-37039620 | MS.gene019169:intron | 15.0% |
| !!! | ATAGTTGAATTTTAAAATGA+GGG | - | chr3.3:37038772-37038791 | MS.gene019169:intron | 15.0% |
| !!! | CATTTTAAAATTCAACTATA+AGG | + | chr3.3:37038771-37038790 | None:intergenic | 15.0% |
| !!! | TAAAAAACAAAAAATTTTGC+AGG | - | chr3.3:37039570-37039589 | MS.gene019169:intron | 15.0% |
| !!! | TAAAAAACAAAATATTTTGC+AGG | - | chr3.3:37039468-37039487 | MS.gene019169:intron | 15.0% |
| !!! | TATAGTTGAATTTTAAAATG+AGG | - | chr3.3:37038771-37038790 | MS.gene019169:intron | 15.0% |
| !! | AATCGTTAAAAGAAAAAAGT+AGG | + | chr3.3:37038301-37038320 | None:intergenic | 20.0% |
| !! | AGTATATGGAATAAAAGAAT+CGG | + | chr3.3:37036932-37036951 | None:intergenic | 20.0% |
| !! | ATAAATTATCTTAAAGAGCT+AGG | - | chr3.3:37038019-37038038 | MS.gene019169:intron | 20.0% |
| !! | ATCTTATCATGTATAAAAGT+GGG | - | chr3.3:37040186-37040205 | MS.gene019169:intron | 20.0% |
| !! | ATGTCATTGCATATAATTTA+TGG | - | chr3.3:37040588-37040607 | MS.gene019169:CDS | 20.0% |
| !! | ATTATAACTTGGCTAAAATA+TGG | - | chr3.3:37039302-37039321 | MS.gene019169:intron | 20.0% |
| !! | ATTCAACTACATAATAAAGT+TGG | + | chr3.3:37038563-37038582 | None:intergenic | 20.0% |
| !! | TAAATGACATAAACAATAAC+AGG | + | chr3.3:37038202-37038221 | None:intergenic | 20.0% |
| !! | TAAGATTAGAAGACATTATT+TGG | + | chr3.3:37038122-37038141 | None:intergenic | 20.0% |
| !! | TCTTTCTCTTTATATATACT+TGG | - | chr3.3:37037502-37037521 | MS.gene019169:intron | 20.0% |
| !! | TGATATGATATCTCAAAATA+AGG | + | chr3.3:37039270-37039289 | None:intergenic | 20.0% |
| !! | TTAAAATTTCAAACTCAAGT+AGG | - | chr3.3:37039900-37039919 | MS.gene019169:intron | 20.0% |
| !! | TTTGTTGCATAAACAAAATT+AGG | - | chr3.3:37037823-37037842 | MS.gene019169:intron | 20.0% |
| !!! | AAGTTTTTCAATGAGAAAAA+GGG | - | chr3.3:37040263-37040282 | MS.gene019169:intron | 20.0% |
| !!! | ACAACTTTTTTCTATTAGAT+GGG | + | chr3.3:37040651-37040670 | None:intergenic | 20.0% |
| !!! | AGATATTTTGTTTTTTGTCA+TGG | - | chr3.3:37037582-37037601 | MS.gene019169:intron | 20.0% |
| !!! | ATATTTTAGCCTTATAACTT+CGG | - | chr3.3:37039658-37039677 | MS.gene019169:intron | 20.0% |
| !!! | CAAAAACAAAAAATTTTGCA+GGG | - | chr3.3:37039438-37039457 | MS.gene019169:intron | 20.0% |
| !!! | CTGATTTTGTAATGATATTT+TGG | - | chr3.3:37038469-37038488 | MS.gene019169:intron | 20.0% |
| !!! | GATATTTTGTTTTTTGTCAT+GGG | - | chr3.3:37037583-37037602 | MS.gene019169:intron | 20.0% |
| !!! | GCATTAAAAAGTTAAGTTTT+GGG | - | chr3.3:37039932-37039951 | MS.gene019169:intron | 20.0% |
| !!! | TAAGTTTTTCAATGAGAAAA+AGG | - | chr3.3:37040262-37040281 | MS.gene019169:intron | 20.0% |
| !!! | TAATTCTAACATTTTGATGA+CGG | - | chr3.3:37037927-37037946 | MS.gene019169:intron | 20.0% |
| !!! | TAGTTGAATTTTAAAATGAG+GGG | - | chr3.3:37038773-37038792 | MS.gene019169:intron | 20.0% |
| !!! | TCAAAAACAAAAAATTTTGC+AGG | - | chr3.3:37039437-37039456 | MS.gene019169:intron | 20.0% |
| !!! | TGCATTAAAAAGTTAAGTTT+TGG | - | chr3.3:37039931-37039950 | MS.gene019169:intron | 20.0% |
| ! | AAATATATTTCAAACTGCAG+CGG | + | chr3.3:37039217-37039236 | None:intergenic | 25.0% |
| ! | AACAACTATGTCATTATACA+TGG | - | chr3.3:37037296-37037315 | MS.gene019169:intron | 25.0% |
| ! | ACTTGACTTCATATTAACAT+TGG | - | chr3.3:37038608-37038627 | MS.gene019169:intron | 25.0% |
| ! | ATATTGTTCAATCATTCAAC+AGG | - | chr3.3:37040893-37040912 | MS.gene019169:intron | 25.0% |
| ! | ATGCAAATCATCACAAAAAT+GGG | - | chr3.3:37039533-37039552 | MS.gene019169:intron | 25.0% |
| ! | ATTCCATATACTTCTGTTAT+TGG | - | chr3.3:37036940-37036959 | MS.gene019169:CDS | 25.0% |
| ! | CATCTAATAGAAAAAAGTTG+TGG | - | chr3.3:37040650-37040669 | MS.gene019169:intron | 25.0% |
| ! | CATCTTATCATGTATAAAAG+TGG | - | chr3.3:37040185-37040204 | MS.gene019169:intron | 25.0% |
| ! | CATTGCATATAATTTATGGT+AGG | - | chr3.3:37040592-37040611 | MS.gene019169:CDS | 25.0% |
| ! | GAAGTTATAAGGCTAAAATA+TGG | + | chr3.3:37039659-37039678 | None:intergenic | 25.0% |
| ! | GATGTTGTATCTTCATATTA+TGG | - | chr3.3:37040672-37040691 | MS.gene019169:intron | 25.0% |
| ! | TACATGATAAGATGTTATGT+TGG | + | chr3.3:37040179-37040198 | None:intergenic | 25.0% |
| ! | TAGTTGTTAAGCATGAATAA+TGG | + | chr3.3:37040865-37040884 | None:intergenic | 25.0% |
| ! | TATGATCTTACTCAACTTAT+TGG | - | chr3.3:37037095-37037114 | MS.gene019169:intron | 25.0% |
| ! | TATGCAAATCATCACAAAAA+TGG | - | chr3.3:37039532-37039551 | MS.gene019169:intron | 25.0% |
| ! | TCAATTATCATTGACGAATT+TGG | - | chr3.3:37038096-37038115 | MS.gene019169:intron | 25.0% |
| ! | TCTATTATCCTTTGTTGATA+TGG | - | chr3.3:37038172-37038191 | MS.gene019169:intron | 25.0% |
| ! | TCTTATCATGTATAAAAGTG+GGG | - | chr3.3:37040187-37040206 | MS.gene019169:intron | 25.0% |
| ! | TTATTCATGCTTAACAACTA+AGG | - | chr3.3:37040865-37040884 | MS.gene019169:intron | 25.0% |
| !! | GAATTTTCAATTGTTAACAC+TGG | - | chr3.3:37040143-37040162 | MS.gene019169:intron | 25.0% |
| !!! | AAGTTGAATTTCATTTTTGC+GGG | + | chr3.3:37037676-37037695 | None:intergenic | 25.0% |
| !!! | AAGTTTTGGGTGAATTTAAA+GGG | - | chr3.3:37039945-37039964 | MS.gene019169:intron | 25.0% |
| !!! | CAAGTTGAATTTCATTTTTG+CGG | + | chr3.3:37037677-37037696 | None:intergenic | 25.0% |
| !!! | CACAACTTTTTTCTATTAGA+TGG | + | chr3.3:37040652-37040671 | None:intergenic | 25.0% |
| !!! | TAAGTTTTGGGTGAATTTAA+AGG | - | chr3.3:37039944-37039963 | MS.gene019169:intron | 25.0% |
| !!! | TGTTTTTGTTGTTTTTGTGA+AGG | - | chr3.3:37039106-37039125 | MS.gene019169:intron | 25.0% |
| !!! | TTGTTTTTGAAAATAGTCCA+GGG | - | chr3.3:37039407-37039426 | MS.gene019169:CDS | 25.0% |
| !!! | TTTGTTTTTGAAAATAGTCC+AGG | - | chr3.3:37039406-37039425 | MS.gene019169:CDS | 25.0% |
| AAAAAATGGTACTCAACTCA+AGG | + | chr3.3:37037889-37037908 | None:intergenic | 30.0% | |
| AAAAATTGCTCACTCTCAAA+TGG | - | chr3.3:37040410-37040429 | MS.gene019169:intron | 30.0% | |
| AATGATCTCACATGAAACAA+TGG | + | chr3.3:37040700-37040719 | None:intergenic | 30.0% | |
| AGTTATGTTCTCATCATATG+TGG | - | chr3.3:37040758-37040777 | MS.gene019169:CDS | 30.0% | |
| ATAGCTCTTGTCATAGTATA+GGG | - | chr3.3:37040301-37040320 | MS.gene019169:intron | 30.0% | |
| ATTATCCTTTGTTGATATGG+TGG | - | chr3.3:37038175-37038194 | MS.gene019169:intron | 30.0% | |
| ATTGTCAACATTTGCATTAG+GGG | - | chr3.3:37037383-37037402 | MS.gene019169:intron | 30.0% | |
| CAACACATTGTAGATGTAAA+TGG | - | chr3.3:37040564-37040583 | MS.gene019169:CDS | 30.0% | |
| CAGATAAAAGAAAATGTTGC+AGG | + | chr3.3:37038383-37038402 | None:intergenic | 30.0% | |
| CATTGTCAACATTTGCATTA+GGG | - | chr3.3:37037382-37037401 | MS.gene019169:intron | 30.0% | |
| CTCAGATACAATATTAGTAG+TGG | + | chr3.3:37037459-37037478 | None:intergenic | 30.0% | |
| CTCATGATACGAAATGTTTA+TGG | - | chr3.3:37037224-37037243 | MS.gene019169:intron | 30.0% | |
| GGGGAGATTAATTATCAAAA+TGG | - | chr3.3:37040206-37040225 | MS.gene019169:intron | 30.0% | |
| GTTGAAATGTAGAACAAAGT+AGG | + | chr3.3:37038349-37038368 | None:intergenic | 30.0% | |
| TAAGGATACTTCAACAAACA+TGG | + | chr3.3:37039252-37039271 | None:intergenic | 30.0% | |
| TATAGCTCTTGTCATAGTAT+AGG | - | chr3.3:37040300-37040319 | MS.gene019169:intron | 30.0% | |
| TCATTGTCAACATTTGCATT+AGG | - | chr3.3:37037381-37037400 | MS.gene019169:intron | 30.0% | |
| TGCAAATCATCACAAAAATG+GGG | - | chr3.3:37039534-37039553 | MS.gene019169:intron | 30.0% | |
| TGTCAAGAATAGACTCATAA+TGG | + | chr3.3:37040345-37040364 | None:intergenic | 30.0% | |
| TTATCTTAAAGAGCTAGGAA+AGG | - | chr3.3:37038024-37038043 | MS.gene019169:intron | 30.0% | |
| TTGAGAAAATGCACATCATT+GGG | - | chr3.3:37040916-37040935 | MS.gene019169:CDS | 30.0% | |
| ! | ACTAAAGTTGTTGTTAGTAC+TGG | - | chr3.3:37040013-37040032 | MS.gene019169:intron | 30.0% |
| ! | ATTGATAATTGTTGTGCCTA+TGG | - | chr3.3:37040944-37040963 | MS.gene019169:CDS | 30.0% |
| ! | ATTTTCCTCTCACAAATGAA+TGG | + | chr3.3:37040375-37040394 | None:intergenic | 30.0% |
| ! | CAACATTTTCTTTTATCTGG+TGG | - | chr3.3:37038384-37038403 | MS.gene019169:intron | 30.0% |
| ! | CTGCAACATTTTCTTTTATC+TGG | - | chr3.3:37038381-37038400 | MS.gene019169:intron | 30.0% |
| ! | GATACAATATTAGTAGTGGA+AGG | + | chr3.3:37037455-37037474 | None:intergenic | 30.0% |
| ! | TGAACCCATTTTGTAGTTTT+TGG | + | chr3.3:37039496-37039515 | None:intergenic | 30.0% |
| ! | TGTATCTGAGATAAACCTAT+GGG | - | chr3.3:37037469-37037488 | MS.gene019169:intron | 30.0% |
| ! | TTGTATCTGAGATAAACCTA+TGG | - | chr3.3:37037468-37037487 | MS.gene019169:intron | 30.0% |
| ! | TTTTGGTATTTTCCTTCTCT+TGG | - | chr3.3:37038486-37038505 | MS.gene019169:intron | 30.0% |
| !! | ATATTTGTTGTGACAGGTTT+CGG | - | chr3.3:37038431-37038450 | MS.gene019169:intron | 30.0% |
| !! | CTTCATATTAACATTGGTTC+AGG | - | chr3.3:37038614-37038633 | MS.gene019169:intron | 30.0% |
| !! | TATTGCATTGCTTGTTTTTC+AGG | - | chr3.3:37037070-37037089 | MS.gene019169:intron | 30.0% |
| !!! | AGGAGAGAATTTATTTTGTG+AGG | - | chr3.3:37037843-37037862 | MS.gene019169:intron | 30.0% |
| !!! | GAGAGTGAGCAATTTTTTAT+GGG | + | chr3.3:37040407-37040426 | None:intergenic | 30.0% |
| !!! | TGAGAGTGAGCAATTTTTTA+TGG | + | chr3.3:37040408-37040427 | None:intergenic | 30.0% |
| !!! | TTGTTTTTGAAAATAGTCCC+TGG | + | chr3.3:37039427-37039446 | None:intergenic | 30.0% |
| AAAGAATATAGTCCACCCAT+AGG | + | chr3.3:37037487-37037506 | None:intergenic | 35.0% | |
| AAATGTTGCAGGTCACAAAA+TGG | + | chr3.3:37038372-37038391 | None:intergenic | 35.0% | |
| AACGTATTGAGTGGAATAAC+CGG | - | chr3.3:37037159-37037178 | MS.gene019169:intron | 35.0% | |
| AATGTTGCAGGTCACAAAAT+GGG | + | chr3.3:37038371-37038390 | None:intergenic | 35.0% | |
| AGGGACCAAAAACTACAAAA+TGG | - | chr3.3:37039488-37039507 | MS.gene019169:intron | 35.0% | |
| ATAGTATAGGGTCAAAGGAA+GGG | - | chr3.3:37040313-37040332 | MS.gene019169:intron | 35.0% | |
| ATATCGCCTTTCTTTCTGAT+TGG | - | chr3.3:37038231-37038250 | MS.gene019169:intron | 35.0% | |
| ATCTACAATGTGTTGTGTTG+TGG | + | chr3.3:37040559-37040578 | None:intergenic | 35.0% | |
| ATGGCTCTTAACATGAAAAG+TGG | - | chr3.3:37040225-37040244 | MS.gene019169:intron | 35.0% | |
| ATTAGATGGGATGAATCACA+TGG | + | chr3.3:37040638-37040657 | None:intergenic | 35.0% | |
| ATTTGCATTAGGGGTAAGTA+TGG | - | chr3.3:37037392-37037411 | MS.gene019169:intron | 35.0% | |
| CAAAGCTTATCTCATCAATG+GGG | - | chr3.3:37039158-37039177 | MS.gene019169:CDS | 35.0% | |
| CCAAAGCTTATCTCATCAAT+GGG | - | chr3.3:37039157-37039176 | MS.gene019169:CDS | 35.0% | |
| CCATATACTTCTGTTATTGG+TGG | - | chr3.3:37036943-37036962 | MS.gene019169:CDS | 35.0% | |
| CGAAAACTGAAGTTAAGTCT+AGG | + | chr3.3:37040124-37040143 | None:intergenic | 35.0% | |
| GATCAAAATGCAGGTATACA+TGG | + | chr3.3:37039760-37039779 | None:intergenic | 35.0% | |
| GATTTGAAAGTTGTGGTGTA+TGG | - | chr3.3:37039805-37039824 | MS.gene019169:intron | 35.0% | |
| GGGACCAAAAACTACAAAAT+GGG | - | chr3.3:37039489-37039508 | MS.gene019169:intron | 35.0% | |
| GTAGCATATTCAATGTTGAG+CGG | - | chr3.3:37038666-37038685 | MS.gene019169:intron | 35.0% | |
| GTATAGAAAGGAAATGCAGA+GGG | - | chr3.3:37040089-37040108 | MS.gene019169:intron | 35.0% | |
| GTTGAGAAAATGCACATCAT+TGG | - | chr3.3:37040915-37040934 | MS.gene019169:CDS | 35.0% | |
| TAACGTAACTTAAGTCACGT+TGG | - | chr3.3:37040482-37040501 | MS.gene019169:intron | 35.0% | |
| TAACTACACTATTCACACAC+TGG | - | chr3.3:37039783-37039802 | MS.gene019169:intron | 35.0% | |
| TAGCATATTCAATGTTGAGC+GGG | - | chr3.3:37038667-37038686 | MS.gene019169:intron | 35.0% | |
| TAGTTACCTGATCAAAATGC+AGG | + | chr3.3:37039769-37039788 | None:intergenic | 35.0% | |
| TATAGAAAGGAAATGCAGAG+GGG | - | chr3.3:37040090-37040109 | MS.gene019169:intron | 35.0% | |
| TATGTGACTTATGTCACGTT+CGG | - | chr3.3:37040514-37040533 | MS.gene019169:CDS | 35.0% | |
| TCCAAAGCTTATCTCATCAA+TGG | - | chr3.3:37039156-37039175 | MS.gene019169:CDS | 35.0% | |
| TCCATTCCAATCAGAAAGAA+AGG | + | chr3.3:37038240-37038259 | None:intergenic | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr3.3:37038868-37038887 | MS.gene019169:intron | 35.0% | |
| TGTAATATTCCTTGCTTGGA+TGG | - | chr3.3:37039182-37039201 | MS.gene019169:CDS | 35.0% | |
| TGTATAGAAAGGAAATGCAG+AGG | - | chr3.3:37040088-37040107 | MS.gene019169:intron | 35.0% | |
| TTCTTTCTGATTGGAATGGA+TGG | - | chr3.3:37038240-37038259 | MS.gene019169:intron | 35.0% | |
| TTGTCATAGTATAGGGTCAA+AGG | - | chr3.3:37040308-37040327 | MS.gene019169:intron | 35.0% | |
| ! | CCACCAATAACAGAAGTATA+TGG | + | chr3.3:37036946-37036965 | None:intergenic | 35.0% |
| ! | GATTTTCGATAAGCTGGAAT+AGG | + | chr3.3:37037138-37037157 | None:intergenic | 35.0% |
| ! | TACCATCTCAAATTGATTCC+CGG | + | chr3.3:37038741-37038760 | None:intergenic | 35.0% |
| ! | TTGGTGGATATGAGTATGTA+AGG | - | chr3.3:37038505-37038524 | MS.gene019169:intron | 35.0% |
| ! | TTGTTGTTAGTACTGGATAG+CGG | - | chr3.3:37040020-37040039 | MS.gene019169:intron | 35.0% |
| ! | TTTAAAATGAGGGGTAACCT+TGG | - | chr3.3:37038782-37038801 | MS.gene019169:intron | 35.0% |
| ! | TTTGTGATGATTTGCATACG+TGG | + | chr3.3:37039530-37039549 | None:intergenic | 35.0% |
| ! | TTTTCACATGGCAGATTTAC+AGG | + | chr3.3:37037751-37037770 | None:intergenic | 35.0% |
| !! | ATTTGCGAAGCTATTTTCAC+TGG | - | chr3.3:37038141-37038160 | MS.gene019169:CDS | 35.0% |
| !! | GAGATACTCTGTTTTTCACA+TGG | + | chr3.3:37037763-37037782 | None:intergenic | 35.0% |
| !! | GTAAACGAACAGAAGTATTC+TGG | + | chr3.3:37039729-37039748 | None:intergenic | 35.0% |
| !! | TGTATACCTGCATTTTGATC+AGG | - | chr3.3:37039760-37039779 | MS.gene019169:intron | 35.0% |
| !! | TGTTCGATATTTGTTGTGAC+AGG | - | chr3.3:37038425-37038444 | MS.gene019169:intron | 35.0% |
| !!! | CTAACATTTTGATGACGGAA+TGG | - | chr3.3:37037932-37037951 | MS.gene019169:intron | 35.0% |
| !!! | GTTTTTTGTCATGGGTTTCT+AGG | - | chr3.3:37037591-37037610 | MS.gene019169:intron | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr3.3:37038869-37038888 | None:intergenic | 35.0% |
| AACCTGCAAATAGACCATTC+CGG | + | chr3.3:37039705-37039724 | None:intergenic | 40.0% | |
| AATATTCCTTGCTTGGATGG+TGG | - | chr3.3:37039185-37039204 | MS.gene019169:CDS | 40.0% | |
| ACAATGTGTTGTGTTGTGGA+TGG | + | chr3.3:37040555-37040574 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr3.3:37038862-37038881 | MS.gene019169:intron | 40.0% | |
| AGCATATTCAATGTTGAGCG+GGG | - | chr3.3:37038668-37038687 | MS.gene019169:intron | 40.0% | |
| ATACATGGTCCTAATCTCTG+AGG | - | chr3.3:37038707-37038726 | MS.gene019169:CDS | 40.0% | |
| ATATTCCTTGCTTGGATGGT+GGG | - | chr3.3:37039186-37039205 | MS.gene019169:CDS | 40.0% | |
| ATCATCACAAAAATGGGGTC+AGG | - | chr3.3:37039539-37039558 | MS.gene019169:intron | 40.0% | |
| ATGCATGACTTAAGTCACGT+GGG | + | chr3.3:37040452-37040471 | None:intergenic | 40.0% | |
| ATTCAACTATAAGGGCAACC+CGG | + | chr3.3:37039053-37039072 | None:intergenic | 40.0% | |
| CAAAACGAGGCATATTTGCA+GGG | + | chr3.3:37039335-37039354 | None:intergenic | 40.0% | |
| CAATGGAAACATCCAGTTAC+CGG | + | chr3.3:37037181-37037200 | None:intergenic | 40.0% | |
| CACACTGGATTTGAAAGTTG+TGG | - | chr3.3:37039798-37039817 | MS.gene019169:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr3.3:37038863-37038882 | MS.gene019169:intron | 40.0% | |
| CATAGTATAGGGTCAAAGGA+AGG | - | chr3.3:37040312-37040331 | MS.gene019169:intron | 40.0% | |
| CCAATAGGACCGAAGTTATA+AGG | + | chr3.3:37039670-37039689 | None:intergenic | 40.0% | |
| CCCATTGATGAGATAAGCTT+TGG | + | chr3.3:37039160-37039179 | None:intergenic | 40.0% | |
| CCTCTCACAAATGAATGGTA+AGG | + | chr3.3:37040370-37040389 | None:intergenic | 40.0% | |
| CCTTACCATTCATTTGTGAG+AGG | - | chr3.3:37040367-37040386 | MS.gene019169:intron | 40.0% | |
| CCTTATAACTTCGGTCCTAT+TGG | - | chr3.3:37039667-37039686 | MS.gene019169:intron | 40.0% | |
| CGAAAATCCAACGTATTGAG+TGG | - | chr3.3:37037150-37037169 | MS.gene019169:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr3.3:37038894-37038913 | MS.gene019169:intron | 40.0% | |
| CTGTAATAGGATCGGTAGAT+TGG | + | chr3.3:37037350-37037369 | None:intergenic | 40.0% | |
| GAACGTGACATAAGTCACAT+AGG | + | chr3.3:37040515-37040534 | None:intergenic | 40.0% | |
| GAAGAGCTTCGAACTGTAAT+AGG | + | chr3.3:37037363-37037382 | None:intergenic | 40.0% | |
| GCCTTTCTTTCTGATTGGAA+TGG | - | chr3.3:37038236-37038255 | MS.gene019169:intron | 40.0% | |
| GCTTCGAACTGTAATAGGAT+CGG | + | chr3.3:37037358-37037377 | None:intergenic | 40.0% | |
| GGGTTGTAATATTCCTTGCT+TGG | - | chr3.3:37039178-37039197 | MS.gene019169:CDS | 40.0% | |
| GGTTAAGTCATTCTGCAATG+AGG | - | chr3.3:37037785-37037804 | MS.gene019169:intron | 40.0% | |
| GGTTATTCCACTCAATACGT+TGG | + | chr3.3:37037160-37037179 | None:intergenic | 40.0% | |
| GTCATGTGACTGTAAAGTCA+CGG | - | chr3.3:37038824-37038843 | MS.gene019169:intron | 40.0% | |
| TAAAACCAAAACGAGACGCA+GGG | - | chr3.3:37039626-37039645 | MS.gene019169:intron | 40.0% | |
| TACTCATATCCACCAAGAGA+AGG | + | chr3.3:37038501-37038520 | None:intergenic | 40.0% | |
| TATCTGTCATGAACCTGGTT+TGG | - | chr3.3:37040970-37040989 | MS.gene019169:CDS | 40.0% | |
| TCATCACAAAAATGGGGTCA+GGG | - | chr3.3:37039540-37039559 | MS.gene019169:intron | 40.0% | |
| TCATCATATGTGGAGCAGAA+GGG | - | chr3.3:37040768-37040787 | MS.gene019169:CDS | 40.0% | |
| TCATGTGACTGTAAAGTCAC+GGG | - | chr3.3:37038825-37038844 | MS.gene019169:intron | 40.0% | |
| TCGATGTAGCTGGTATGAAA+AGG | - | chr3.3:37039133-37039152 | MS.gene019169:intron | 40.0% | |
| TCTGATTGGAATGGATGGTT+CGG | - | chr3.3:37038245-37038264 | MS.gene019169:intron | 40.0% | |
| TGTTGTGGATGGAAGAAAGA+AGG | + | chr3.3:37040544-37040563 | None:intergenic | 40.0% | |
| TTCATGACAGATAGCACCAT+AGG | + | chr3.3:37040963-37040982 | None:intergenic | 40.0% | |
| ! | ACGTTGGATTTTCGATAAGC+TGG | + | chr3.3:37037144-37037163 | None:intergenic | 40.0% |
| ! | ATCTGAGATAAACCTATGGG+TGG | - | chr3.3:37037472-37037491 | MS.gene019169:intron | 40.0% |
| ! | CGAACAAATTAGCCTGATTC+TGG | + | chr3.3:37036891-37036910 | None:intergenic | 40.0% |
| ! | GAGGGGTATAGTGTATAGAA+AGG | - | chr3.3:37040077-37040096 | MS.gene019169:intron | 40.0% |
| ! | GTGAAAAACAGAGTATCTCG+TGG | - | chr3.3:37037764-37037783 | MS.gene019169:intron | 40.0% |
| ! | TGGTATTTTCCTTCTCTTGG+TGG | - | chr3.3:37038489-37038508 | MS.gene019169:intron | 40.0% |
| !! | CTATTGGACTTGTTGCTTAC+CGG | - | chr3.3:37039683-37039702 | MS.gene019169:intron | 40.0% |
| !! | TCAGGCTAATTTGTTCGTGA+AGG | - | chr3.3:37036894-37036913 | MS.gene019169:CDS | 40.0% |
| AGGGCAGCTTTACACATACA+TGG | - | chr3.3:37038692-37038711 | MS.gene019169:CDS | 45.0% | |
| ATTCAATGTTGAGCGGGGAA+GGG | - | chr3.3:37038673-37038692 | MS.gene019169:intron | 45.0% | |
| CAAAGATCGTTAGAGGCTTG+AGG | - | chr3.3:37040997-37041016 | MS.gene019169:CDS | 45.0% | |
| CAGGGACTAAAACCAAAACG+AGG | + | chr3.3:37039638-37039619 | None:intergenic | 45.0% | |
| CAGGTCCACCATATCAACAA+AGG | + | chr3.3:37038183-37038202 | None:intergenic | 45.0% | |
| CATGCATGACTTAAGTCACG+TGG | + | chr3.3:37040453-37040472 | None:intergenic | 45.0% | |
| CCAAAACGAGGCATATTTGC+AGG | + | chr3.3:37039336-37039355 | None:intergenic | 45.0% | |
| CGGTAAGCAACAAGTCCAAT+AGG | + | chr3.3:37039685-37039704 | None:intergenic | 45.0% | |
| CTAAAACCAAAACGAGACGC+AGG | - | chr3.3:37039625-37039644 | MS.gene019169:intron | 45.0% | |
| CTCATCATATGTGGAGCAGA+AGG | - | chr3.3:37040767-37040786 | MS.gene019169:CDS | 45.0% | |
| CTCCGGGAATCAATTTGAGA+TGG | - | chr3.3:37038736-37038755 | MS.gene019169:CDS | 45.0% | |
| GAGTAGTTGCCTCAGAGATT+AGG | + | chr3.3:37038719-37038738 | None:intergenic | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr3.3:37038893-37038912 | MS.gene019169:intron | 45.0% | |
| GCTCGAATCTTACCAGAATC+AGG | - | chr3.3:37036876-37036895 | MS.gene019169:CDS | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr3.3:37038890-37038909 | MS.gene019169:intron | 45.0% | |
| GTTGCCCTAAAAACAGGGTA+AGG | - | chr3.3:37038961-37038980 | MS.gene019169:intron | 45.0% | |
| TACCGGAATGGTCTATTTGC+AGG | - | chr3.3:37039700-37039719 | MS.gene019169:intron | 45.0% | |
| TAGAGGCTTGAGGAAGACAT+TGG | - | chr3.3:37041007-37041026 | MS.gene019169:CDS | 45.0% | |
| TATTCAATGTTGAGCGGGGA+AGG | - | chr3.3:37038672-37038691 | MS.gene019169:intron | 45.0% | |
| TGAGGAAGACATTGGCAAAG+AGG | - | chr3.3:37041015-37041034 | MS.gene019169:CDS | 45.0% | |
| TGAGTGGAATAACCGGTAAC+TGG | - | chr3.3:37037166-37037185 | MS.gene019169:intron | 45.0% | |
| TGCATGACTTAAGTCACGTG+GGG | + | chr3.3:37040451-37040470 | None:intergenic | 45.0% | |
| TGGCATGTTTGCTTGCAAAC+TGG | - | chr3.3:37036963-37036982 | MS.gene019169:intron | 45.0% | |
| TGGTTCGCAAAGATCGTTAG+AGG | - | chr3.3:37040990-37041009 | MS.gene019169:CDS | 45.0% | |
| TTGTTGTGACAGGTTTCGGT+TGG | - | chr3.3:37038435-37038454 | MS.gene019169:intron | 45.0% | |
| TTTAACCCACCATCCAAGCA+AGG | + | chr3.3:37039194-37039213 | None:intergenic | 45.0% | |
| ! | CCTGCAAATATGCCTCGTTT+TGG | - | chr3.3:37039333-37039352 | MS.gene019169:intron | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr3.3:37038858-37038877 | None:intergenic | 45.0% |
| !! | AATCTCTGAGGCAACTACTC+CGG | - | chr3.3:37038719-37038738 | MS.gene019169:CDS | 45.0% |
| !! | TGAAGGTATCTCGATGTAGC+TGG | - | chr3.3:37039123-37039142 | MS.gene019169:intron | 45.0% |
| !!! | CTCGTTTTGGTTTTAGTCCC+TGG | - | chr3.3:37039346-37039365 | MS.gene019169:intron | 45.0% |
| !!! | CTCGTTTTGGTTTTAGTCCC+TGG | + | chr3.3:37039365-37039346 | None:intergenic | 45.0% |
| !!! | GCAGCCTTACCCTGTTTTTA+GGG | + | chr3.3:37038875-37038894 | None:intergenic | 45.0% |
| !!! | AAATATTTTGTTTTTTAAAA+AGG | + | chr3.3:37039465-37039484 | None:intergenic | 5.0% |
| AAAGTCACGGGTTCAAGTCC+TGG | - | chr3.3:37038837-37038856 | MS.gene019169:intron | 50.0% | |
| ACCGGGTTGCCCTAAAAACA+GGG | - | chr3.3:37038956-37038975 | MS.gene019169:intron | 50.0% | |
| AGAAGGGTGGTAGAGGTGAA+AGG | - | chr3.3:37040784-37040803 | MS.gene019169:intron | 50.0% | |
| ATGACTTAAGTCACGTGGGG+GGG | + | chr3.3:37040448-37040467 | None:intergenic | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr3.3:37038802-37038821 | None:intergenic | 50.0% | |
| CATGACTTAAGTCACGTGGG+GGG | + | chr3.3:37040449-37040468 | None:intergenic | 50.0% | |
| CCAAACTGGGTGTGTATGAG+GGG | - | chr3.3:37040060-37040079 | MS.gene019169:intron | 50.0% | |
| CCCAAACTGGGTGTGTATGA+GGG | - | chr3.3:37040059-37040078 | MS.gene019169:intron | 50.0% | |
| CCCTCATACACACCCAGTTT+GGG | + | chr3.3:37040062-37040081 | None:intergenic | 50.0% | |
| CCTCATACACACCCAGTTTG+GGG | + | chr3.3:37040061-37040080 | None:intergenic | 50.0% | |
| CGATCTTTGCGAACCAAACC+AGG | + | chr3.3:37040986-37041005 | None:intergenic | 50.0% | |
| CTCATACACACCCAGTTTGG+GGG | + | chr3.3:37040060-37040079 | None:intergenic | 50.0% | |
| GCATGACTTAAGTCACGTGG+GGG | + | chr3.3:37040450-37040469 | None:intergenic | 50.0% | |
| TCATATGTGGAGCAGAAGGG+TGG | - | chr3.3:37040771-37040790 | MS.gene019169:CDS | 50.0% | |
| ! | GGTGCTATCTGTCATGAACC+TGG | - | chr3.3:37040965-37040984 | MS.gene019169:CDS | 50.0% |
| ! | TTAGTCCCTGCGTCTCGTTT+TGG | + | chr3.3:37039634-37039653 | None:intergenic | 50.0% |
| !! | ATCTCTGAGGCAACTACTCC+GGG | - | chr3.3:37038720-37038739 | MS.gene019169:CDS | 50.0% |
| !! | CGCAGCCTTACCCTGTTTTT+AGG | + | chr3.3:37038876-37038895 | None:intergenic | 50.0% |
| !! | GGACTTGTTGCTTACCGGAA+TGG | - | chr3.3:37039688-37039707 | MS.gene019169:intron | 50.0% |
| !!! | ACCCTGTTTTTAGGGCAACC+CGG | + | chr3.3:37038960-37038979 | None:intergenic | 50.0% |
| AGATGGCCAACCCCCAAACT+GGG | - | chr3.3:37040047-37040066 | MS.gene019169:intron | 55.0% | |
| CACCGGGTTGCCCTAAAAAC+AGG | - | chr3.3:37038955-37038974 | MS.gene019169:intron | 55.0% | |
| CCCCAAACTGGGTGTGTATG+AGG | - | chr3.3:37040058-37040077 | MS.gene019169:intron | 55.0% | |
| CCCCTCATACACACCCAGTT+TGG | + | chr3.3:37040063-37040082 | None:intergenic | 55.0% | |
| TACACACCCAGTTTGGGGGT+TGG | + | chr3.3:37040056-37040075 | None:intergenic | 55.0% | |
| ! | AAGTCACGTGGGGGGGATTT+TGG | + | chr3.3:37040441-37040460 | None:intergenic | 55.0% |
| ! | AGTCACGTGGGGGGGATTTT+GGG | + | chr3.3:37040440-37040459 | None:intergenic | 55.0% |
| ! | TACTGGATAGCGGCACGAGA+TGG | - | chr3.3:37040030-37040049 | MS.gene019169:intron | 55.0% |
| ACTGAAGCTCCCGCATACGC+AGG | + | chr3.3:37038934-37038953 | None:intergenic | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr3.3:37038791-37038810 | MS.gene019169:intron | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | - | chr3.3:37038938-37038957 | MS.gene019169:intron | 60.0% | |
| CTGAAGCTCCCGCATACGCA+GGG | + | chr3.3:37038933-37038952 | None:intergenic | 60.0% | |
| GAGATGGCCAACCCCCAAAC+TGG | - | chr3.3:37040046-37040065 | MS.gene019169:intron | 60.0% | |
| GTGGAGCAGAAGGGTGGTAG+AGG | - | chr3.3:37040777-37040796 | MS.gene019169:CDS | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr3.3:37038906-37038925 | MS.gene019169:intron | 60.0% |
| CATACGCAGGGTCCGGGAAG+GGG | + | chr3.3:37038921-37038940 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr3.3:37038908-37038927 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | - | chr3.3:37038921-37038940 | MS.gene019169:intron | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | + | chr3.3:37038922-37038941 | None:intergenic | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | - | chr3.3:37038939-37038958 | MS.gene019169:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | - | chr3.3:37038922-37038941 | MS.gene019169:intron | 65.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | + | chr3.3:37038923-37038942 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | + | chr3.3:37038927-37038946 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | + | chr3.3:37038928-37038947 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 37036850 | 37041043 | 37036850 | ID=MS.gene019169 |
| chr3.3 | mRNA | 37036850 | 37041043 | 37036850 | ID=MS.gene019169.t1;Parent=MS.gene019169 |
| chr3.3 | exon | 37040909 | 37041043 | 37040909 | ID=MS.gene019169.t1.exon1;Parent=MS.gene019169.t1 |
| chr3.3 | CDS | 37040909 | 37041043 | 37040909 | ID=cds.MS.gene019169.t1;Parent=MS.gene019169.t1 |
| chr3.3 | exon | 37040713 | 37040801 | 37040713 | ID=MS.gene019169.t1.exon2;Parent=MS.gene019169.t1 |
| chr3.3 | CDS | 37040713 | 37040801 | 37040713 | ID=cds.MS.gene019169.t1;Parent=MS.gene019169.t1 |
| chr3.3 | exon | 37040489 | 37040627 | 37040489 | ID=MS.gene019169.t1.exon3;Parent=MS.gene019169.t1 |
| chr3.3 | CDS | 37040489 | 37040627 | 37040489 | ID=cds.MS.gene019169.t1;Parent=MS.gene019169.t1 |
| chr3.3 | exon | 37039372 | 37039446 | 37039372 | ID=MS.gene019169.t1.exon4;Parent=MS.gene019169.t1 |
| chr3.3 | CDS | 37039372 | 37039446 | 37039372 | ID=cds.MS.gene019169.t1;Parent=MS.gene019169.t1 |
| chr3.3 | exon | 37039136 | 37039257 | 37039136 | ID=MS.gene019169.t1.exon5;Parent=MS.gene019169.t1 |
| chr3.3 | CDS | 37039136 | 37039257 | 37039136 | ID=cds.MS.gene019169.t1;Parent=MS.gene019169.t1 |
| chr3.3 | exon | 37038690 | 37038765 | 37038690 | ID=MS.gene019169.t1.exon6;Parent=MS.gene019169.t1 |
| chr3.3 | CDS | 37038690 | 37038765 | 37038690 | ID=cds.MS.gene019169.t1;Parent=MS.gene019169.t1 |
| chr3.3 | exon | 37038112 | 37038171 | 37038112 | ID=MS.gene019169.t1.exon7;Parent=MS.gene019169.t1 |
| chr3.3 | CDS | 37038112 | 37038171 | 37038112 | ID=cds.MS.gene019169.t1;Parent=MS.gene019169.t1 |
| chr3.3 | exon | 37036850 | 37036978 | 37036850 | ID=MS.gene019169.t1.exon8;Parent=MS.gene019169.t1 |
| chr3.3 | CDS | 37036850 | 37036978 | 37036850 | ID=cds.MS.gene019169.t1;Parent=MS.gene019169.t1 |
| Gene Sequence |
| Protein sequence |
