Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05093.t1 | XP_013460512.1 | 95.6 | 225 | 10 | 0 | 4 | 228 | 31 | 255 | 5.80E-116 | 427.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05093.t1 | Q6PGS5 | 28.8 | 219 | 138 | 5 | 14 | 224 | 31 | 239 | 8.4e-15 | 82.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05093.t1 | I3SF47 | 95.6 | 225 | 10 | 0 | 4 | 228 | 31 | 255 | 4.2e-116 | 427.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049621 | MS.gene05093 | 0.982275 | 1.13E-154 | -1.69E-46 |
| MS.gene05093 | MS.gene055174 | 0.801347 | 9.40E-49 | -1.69E-46 |
| MS.gene05093 | MS.gene89831 | 0.810211 | 1.29E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene05093 | MS.gene038254 | PPI |
| MS.gene05093 | MS.gene47736 | PPI |
| MS.gene46944 | MS.gene05093 | PPI |
| MS.gene05093 | MS.gene48005 | PPI |
| MS.gene017039 | MS.gene05093 | PPI |
| MS.gene05093 | MS.gene019169 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05093.t1 | MTR_3g063070 | 95.133 | 226 | 11 | 0 | 4 | 229 | 31 | 256 | 7.24e-156 | 434 |
| MS.gene05093.t1 | MTR_3g450410 | 46.575 | 219 | 117 | 0 | 6 | 224 | 46 | 264 | 1.59e-70 | 218 |
| MS.gene05093.t1 | MTR_5g090550 | 49.772 | 219 | 110 | 0 | 6 | 224 | 46 | 264 | 1.54e-68 | 213 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05093.t1 | AT4G10360 | 59.817 | 219 | 88 | 0 | 6 | 224 | 31 | 249 | 4.45e-93 | 276 |
| MS.gene05093.t1 | AT4G10360 | 59.817 | 219 | 88 | 0 | 6 | 224 | 31 | 249 | 4.45e-93 | 276 |
| MS.gene05093.t1 | AT4G10360 | 59.817 | 219 | 88 | 0 | 6 | 224 | 31 | 249 | 4.45e-93 | 276 |
| MS.gene05093.t1 | AT4G19645 | 51.556 | 225 | 108 | 1 | 6 | 229 | 39 | 263 | 1.40e-72 | 223 |
| MS.gene05093.t1 | AT4G19645 | 51.556 | 225 | 108 | 1 | 6 | 229 | 39 | 263 | 1.40e-72 | 223 |
| MS.gene05093.t1 | AT4G19645 | 51.556 | 225 | 108 | 1 | 6 | 229 | 39 | 263 | 1.40e-72 | 223 |
| MS.gene05093.t1 | AT4G19645 | 51.556 | 225 | 108 | 1 | 6 | 229 | 39 | 263 | 1.40e-72 | 223 |
| MS.gene05093.t1 | AT4G19645 | 51.556 | 225 | 108 | 1 | 6 | 229 | 39 | 263 | 1.40e-72 | 223 |
| MS.gene05093.t1 | AT1G31300 | 46.188 | 223 | 120 | 0 | 6 | 228 | 48 | 270 | 1.56e-65 | 206 |
| MS.gene05093.t1 | AT1G31300 | 46.188 | 223 | 120 | 0 | 6 | 228 | 48 | 270 | 1.56e-65 | 206 |
| MS.gene05093.t1 | AT1G31300 | 46.188 | 223 | 120 | 0 | 6 | 228 | 48 | 270 | 1.56e-65 | 206 |
Find 51 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGCAATATGGTGTTATTT+TGG | 0.215995 | 3.4:+65285597 | None:intergenic |
| TATCAGTGATGAATTTATTT+TGG | 0.229458 | 3.4:-65288151 | MS.gene05093:CDS |
| TTTCTCAGATTCAGTATTAT+CGG | 0.278111 | 3.4:-65290344 | MS.gene05093:intron |
| GCGTGCAGACCTCGTCAAAA+TGG | 0.291907 | 3.4:+65288320 | None:intergenic |
| AGCACATATCTACATATTAA+TGG | 0.324767 | 3.4:-65289263 | MS.gene05093:CDS |
| TGTCTAGTTGTTTGCGCATC+TGG | 0.341367 | 3.4:+65285647 | None:intergenic |
| AATGGTGTTGCATTGTTCTT+CGG | 0.349885 | 3.4:-65289073 | MS.gene05093:CDS |
| AATGGGTTTCTACAGCTTGC+TGG | 0.354123 | 3.4:-65288189 | MS.gene05093:CDS |
| ATGGTGTTGCATTGTTCTTC+GGG | 0.356765 | 3.4:-65289072 | MS.gene05093:CDS |
| CTTGACCACTTAGCAAAGAT+TGG | 0.384356 | 3.4:+65289284 | None:intergenic |
| TACTTTCATATACAGGTACT+TGG | 0.402020 | 3.4:-65289134 | MS.gene05093:intron |
| AGAGCTCAAAACTTTACATC+TGG | 0.413236 | 3.4:-65289096 | MS.gene05093:CDS |
| TCCCTTACTTCAGGTGAAGC+AGG | 0.413748 | 3.4:-65288219 | MS.gene05093:intron |
| AAGTCTCTTGTTGAGCAATA+TGG | 0.416593 | 3.4:+65285586 | None:intergenic |
| TACAGAAAATTGAGCAGTGC+TGG | 0.425806 | 3.4:-65290592 | MS.gene05093:CDS |
| TTCTTTGAACAGTTCTCTAC+AGG | 0.430747 | 3.4:-65289870 | MS.gene05093:intron |
| GATCTTATCAGATCTATTCA+AGG | 0.436308 | 3.4:-65290407 | MS.gene05093:CDS |
| GGAAAGTTGAATGGAATAAC+CGG | 0.468796 | 3.4:-65290570 | MS.gene05093:intron |
| TACCATCTTAGATTTACAAA+AGG | 0.476978 | 3.4:+65289217 | None:intergenic |
| TATTCCAAACCTCCCAAAGC+TGG | 0.477354 | 3.4:+65289807 | None:intergenic |
| ATTATCCAATCTTTGCTAAG+TGG | 0.477430 | 3.4:-65289289 | MS.gene05093:CDS |
| TGCATTGTTCTTCGGGTGGT+TGG | 0.478507 | 3.4:-65289065 | MS.gene05093:intron |
| CGTGCAGACCTCGTCAAAAT+GGG | 0.484614 | 3.4:+65288321 | None:intergenic |
| TAGTTGTTTGCGCATCTGGT+GGG | 0.486431 | 3.4:+65285651 | None:intergenic |
| CAAGAGGTAAAATGAAGTAA+AGG | 0.496123 | 3.4:+65290429 | None:intergenic |
| GTGAAGCAGGTCTTCCCAAT+GGG | 0.505190 | 3.4:-65288206 | MS.gene05093:CDS |
| AGTTGTTTGCGCATCTGGTG+GGG | 0.511490 | 3.4:+65285652 | None:intergenic |
| TATTTAAGGTTCTACACCAT+GGG | 0.514818 | 3.4:-65289327 | MS.gene05093:intron |
| TTTAGTTCACGGTTGTTCAC+CGG | 0.524499 | 3.4:-65290616 | MS.gene05093:CDS |
| CATTTATCCTGCAGGTAGCA+AGG | 0.531586 | 3.4:-65288381 | MS.gene05093:intron |
| AGCAAGCTGTAGAAACCCAT+TGG | 0.536058 | 3.4:+65288191 | None:intergenic |
| TACAAAAGGAGTTGTGCCCT+CGG | 0.541149 | 3.4:+65289231 | None:intergenic |
| TCTATTCAAGGATGATTCAC+AGG | 0.545257 | 3.4:-65290395 | MS.gene05093:CDS |
| TCAAAACTTTACATCTGGAA+TGG | 0.555641 | 3.4:-65289091 | MS.gene05093:CDS |
| GCAAGCTGTAGAAACCCATT+GGG | 0.556330 | 3.4:+65288192 | None:intergenic |
| GGTGAAGCAGGTCTTCCCAA+TGG | 0.558925 | 3.4:-65288207 | MS.gene05093:CDS |
| CTAGTTGTTTGCGCATCTGG+TGG | 0.561399 | 3.4:+65285650 | None:intergenic |
| GTTGTTTGCGCATCTGGTGG+GGG | 0.565892 | 3.4:+65285653 | None:intergenic |
| ACAGAAAATTGAGCAGTGCT+GGG | 0.571297 | 3.4:-65290591 | MS.gene05093:CDS |
| TACAGGTACTTGGACACCAC+CGG | 0.573465 | 3.4:-65289124 | MS.gene05093:intron |
| TTGGTTCTGGAAGATTGCCA+AGG | 0.591420 | 3.4:-65288132 | MS.gene05093:CDS |
| GCAGTGCTGGGAAAGTTGAA+TGG | 0.591925 | 3.4:-65290579 | MS.gene05093:CDS |
| TGGTTCTGGAAGATTGCCAA+GGG | 0.598928 | 3.4:-65288131 | MS.gene05093:intron |
| TTATTTAAGGTTCTACACCA+TGG | 0.600364 | 3.4:-65289328 | MS.gene05093:intron |
| GGGTTTCTACAGCTTGCTGG+TGG | 0.612901 | 3.4:-65288186 | MS.gene05093:CDS |
| ATAGATCTGATAAGATCAAG+AGG | 0.617315 | 3.4:+65290413 | None:intergenic |
| TTGAAAACAACGATAGCCCA+TGG | 0.619405 | 3.4:+65289311 | None:intergenic |
| GTGTTGCATTGTTCTTCGGG+TGG | 0.657137 | 3.4:-65289069 | MS.gene05093:CDS |
| TTCATCACTGATAACACAGG+AGG | 0.672119 | 3.4:+65288161 | None:intergenic |
| AAATTCATCACTGATAACAC+AGG | 0.689682 | 3.4:+65288158 | None:intergenic |
| GCTCAACAAGAGACTTGACA+AGG | 0.724517 | 3.4:-65285579 | MS.gene05093:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAAATAATATATTATAG+AGG | - | chr3.4:65288404-65288423 | MS.gene05093:intron | 10.0% |
| !! | TTTAATATAAAAGTCAATTA+TGG | + | chr3.4:65285705-65285724 | None:intergenic | 10.0% |
| !!! | AAGTATATATATTTTTTTTG+TGG | - | chr3.4:65289455-65289474 | MS.gene05093:intron | 10.0% |
| !! | AAAAATTATTCAATTCAGTA+AGG | + | chr3.4:65288280-65288299 | None:intergenic | 15.0% |
| !! | ATGTAAGTCAAAAATATATT+AGG | - | chr3.4:65286423-65286442 | MS.gene05093:intron | 15.0% |
| !! | ATTAAAAAAGGATTATCAAA+AGG | - | chr3.4:65287338-65287357 | MS.gene05093:intron | 15.0% |
| !! | TAAATACGTTAATATGAAAT+AGG | + | chr3.4:65289393-65289412 | None:intergenic | 15.0% |
| !! | TGTAAGTCAAAAATATATTA+GGG | - | chr3.4:65286424-65286443 | MS.gene05093:intron | 15.0% |
| !! | TTAAAAAAGGATTATCAAAA+GGG | - | chr3.4:65287339-65287358 | MS.gene05093:intron | 15.0% |
| !! | TTTACATGTTAAATAGATTT+AGG | - | chr3.4:65285937-65285956 | MS.gene05093:intron | 15.0% |
| !!! | AACATTTTTACAAAGTAAAT+AGG | + | chr3.4:65286450-65286469 | None:intergenic | 15.0% |
| !!! | ATATATTATTTGTTTGCTTT+TGG | + | chr3.4:65288399-65288418 | None:intergenic | 15.0% |
| !!! | CATTCTAAATAATGTATTTT+GGG | - | chr3.4:65288506-65288525 | MS.gene05093:intron | 15.0% |
| !!! | TAAAAATTAGTATATGCTTT+TGG | - | chr3.4:65289187-65289206 | MS.gene05093:intron | 15.0% |
| !!! | TCATTCTAAATAATGTATTT+TGG | - | chr3.4:65288505-65288524 | MS.gene05093:intron | 15.0% |
| !! | AAGATAAAGAAAACGAATTT+AGG | + | chr3.4:65288590-65288609 | None:intergenic | 20.0% |
| !! | AGAGAAACATAGTAATAATT+AGG | + | chr3.4:65289094-65289113 | None:intergenic | 20.0% |
| !! | ATTCAGTAGAATTGTATATT+TGG | - | chr3.4:65288254-65288273 | MS.gene05093:intron | 20.0% |
| !! | CTAACTAACTTCATTATTTA+AGG | - | chr3.4:65286867-65286886 | MS.gene05093:intron | 20.0% |
| !! | CTAATCCATTAATTATTTGA+CGG | - | chr3.4:65290297-65290316 | MS.gene05093:intron | 20.0% |
| !! | GCTTTATCTTAATTAAGAAA+AGG | - | chr3.4:65289808-65289827 | MS.gene05093:CDS | 20.0% |
| !! | GTGACAAAGATAATTAAAAA+AGG | - | chr3.4:65287326-65287345 | MS.gene05093:intron | 20.0% |
| !! | TAAATAGATTTAGGCTAAAA+CGG | - | chr3.4:65285946-65285965 | MS.gene05093:intron | 20.0% |
| !! | TATATACTCAAATATATGCA+AGG | + | chr3.4:65289503-65289522 | None:intergenic | 20.0% |
| !! | TATGATATCTTAGTATGTTT+AGG | - | chr3.4:65289365-65289384 | MS.gene05093:intron | 20.0% |
| !! | TCTTAATTAAGATAAAGCTA+AGG | + | chr3.4:65289806-65289825 | None:intergenic | 20.0% |
| !! | TCTTTAGTAACATTATTCTT+AGG | - | chr3.4:65286262-65286281 | MS.gene05093:intron | 20.0% |
| !! | TTAATAAAAAAACTCATCAG+CGG | - | chr3.4:65290449-65290468 | MS.gene05093:CDS | 20.0% |
| !!! | AAAATGTTCTCATTGTTTTT+TGG | + | chr3.4:65290035-65290054 | None:intergenic | 20.0% |
| !!! | ATATCTACAATTTTCCAATT+CGG | - | chr3.4:65290165-65290184 | MS.gene05093:intron | 20.0% |
| !!! | ATCCTAGTTTTATTTTATTC+TGG | + | chr3.4:65289930-65289949 | None:intergenic | 20.0% |
| !!! | GTTTCTTCTTTTTTTTTGAA+AGG | - | chr3.4:65290081-65290100 | MS.gene05093:intron | 20.0% |
| !!! | TATATTTTTTTTGTGGTGTA+TGG | - | chr3.4:65289462-65289481 | MS.gene05093:intron | 20.0% |
| !!! | TATCAGTGATGAATTTATTT+TGG | - | chr3.4:65288057-65288076 | MS.gene05093:intron | 20.0% |
| !!! | TTATTTCATTTTTCAATGCA+GGG | - | chr3.4:65285726-65285745 | MS.gene05093:intron | 20.0% |
| !!! | TTTATTTCATTTTTCAATGC+AGG | - | chr3.4:65285725-65285744 | MS.gene05093:intron | 20.0% |
| ! | AAACAGAAATCGTTATACAA+AGG | + | chr3.4:65285669-65285688 | None:intergenic | 25.0% |
| ! | AAATACACACAAAAACCAAA+TGG | + | chr3.4:65287710-65287729 | None:intergenic | 25.0% |
| ! | AAATATGTACTGGAGATTTA+AGG | + | chr3.4:65288646-65288665 | None:intergenic | 25.0% |
| ! | AACATTATTCTTAGGCATTA+TGG | - | chr3.4:65286270-65286289 | MS.gene05093:intron | 25.0% |
| ! | AACTACAAGAAAATATGTAC+TGG | + | chr3.4:65288656-65288675 | None:intergenic | 25.0% |
| ! | AGATTGAAATCTAACAGAAA+CGG | + | chr3.4:65286201-65286220 | None:intergenic | 25.0% |
| ! | AGCACATATCTACATATTAA+TGG | - | chr3.4:65286945-65286964 | MS.gene05093:intron | 25.0% |
| ! | ATATTAAATACGATGCCATT+TGG | - | chr3.4:65287692-65287711 | MS.gene05093:intron | 25.0% |
| ! | ATTCACTAGATTACAATCAT+AGG | + | chr3.4:65287953-65287972 | None:intergenic | 25.0% |
| ! | CCAAGATATAAATGAAAACA+AGG | + | chr3.4:65286585-65286604 | None:intergenic | 25.0% |
| ! | GAAACATAGTAATAATTAGG+TGG | + | chr3.4:65289091-65289110 | None:intergenic | 25.0% |
| ! | GACTTTATAAAACATAAACC+TGG | - | chr3.4:65289307-65289326 | MS.gene05093:CDS | 25.0% |
| ! | GATTCATTACTTTCATATAC+AGG | - | chr3.4:65287067-65287086 | MS.gene05093:intron | 25.0% |
| ! | GGAAAGAATGATTATATAGT+TGG | - | chr3.4:65286291-65286310 | MS.gene05093:intron | 25.0% |
| ! | GTTGTCAATGAAAAACATAA+AGG | + | chr3.4:65287648-65287667 | None:intergenic | 25.0% |
| ! | TAATAAAAAAACTCATCAGC+GGG | - | chr3.4:65290450-65290469 | MS.gene05093:CDS | 25.0% |
| ! | TACCATCTTAGATTTACAAA+AGG | + | chr3.4:65286994-65287013 | None:intergenic | 25.0% |
| ! | TGACATATAAATTGTTGTGT+GGG | + | chr3.4:65290136-65290155 | None:intergenic | 25.0% |
| ! | TGCCAGAATAAAATAAAACT+AGG | - | chr3.4:65289925-65289944 | MS.gene05093:intron | 25.0% |
| ! | TGTTAAGTATATATGTGATG+AGG | + | chr3.4:65287925-65287944 | None:intergenic | 25.0% |
| ! | TTAAATCACGAAATGAAATG+AGG | - | chr3.4:65289236-65289255 | MS.gene05093:CDS | 25.0% |
| ! | TTAGAATGATGTTATACTTG+TGG | + | chr3.4:65288494-65288513 | None:intergenic | 25.0% |
| ! | TTCACTAGATTACAATCATA+GGG | + | chr3.4:65287952-65287971 | None:intergenic | 25.0% |
| ! | TTGACATATAAATTGTTGTG+TGG | + | chr3.4:65290137-65290156 | None:intergenic | 25.0% |
| ! | TTTCTCAGATTCAGTATTAT+CGG | - | chr3.4:65285864-65285883 | MS.gene05093:intron | 25.0% |
| !! | CTATAATACAATCACCTTTT+AGG | + | chr3.4:65286005-65286024 | None:intergenic | 25.0% |
| !! | TTATGTTTTTCATTGACAAC+TGG | - | chr3.4:65287648-65287667 | MS.gene05093:intron | 25.0% |
| !!! | CCTTGTTTTCATTTATATCT+TGG | - | chr3.4:65286582-65286601 | MS.gene05093:intron | 25.0% |
| !!! | GCTGATGAGTTTTTTTATTA+AGG | + | chr3.4:65290450-65290469 | None:intergenic | 25.0% |
| !!! | TATTTCATTTTTCAATGCAG+GGG | - | chr3.4:65285727-65285746 | MS.gene05093:intron | 25.0% |
| !!! | TGATGAATTTATTTTGGTTC+TGG | - | chr3.4:65288063-65288082 | MS.gene05093:intron | 25.0% |
| !!! | TGTTTTTGTTTACACATATG+TGG | - | chr3.4:65287863-65287882 | MS.gene05093:intron | 25.0% |
| !!! | TTATGGTCATGCTTTTATTT+TGG | - | chr3.4:65287231-65287250 | MS.gene05093:intron | 25.0% |
| !!! | TTGGTTTTGATGATTTGTAT+AGG | - | chr3.4:65286601-65286620 | MS.gene05093:intron | 25.0% |
| AAAGCAGGTAAATGAAAACA+TGG | + | chr3.4:65286518-65286537 | None:intergenic | 30.0% | |
| AAATTCATCACTGATAACAC+AGG | + | chr3.4:65288053-65288072 | None:intergenic | 30.0% | |
| ACTCAAATATATGCAAGGTT+CGG | + | chr3.4:65289498-65289517 | None:intergenic | 30.0% | |
| AGCTTTCAGTAGTGTATTAA+GGG | - | chr3.4:65288841-65288860 | MS.gene05093:intron | 30.0% | |
| ATAAACTATGCATGCCTAAA+AGG | - | chr3.4:65285988-65286007 | MS.gene05093:intron | 30.0% | |
| ATAACATAAGCAACTTCTTC+AGG | + | chr3.4:65287215-65287234 | None:intergenic | 30.0% | |
| ATAGATCTGATAAGATCAAG+AGG | + | chr3.4:65285798-65285817 | None:intergenic | 30.0% | |
| ATAGGGATGAACATAATTAC+AGG | - | chr3.4:65288371-65288390 | MS.gene05093:intron | 30.0% | |
| ATTATCCAATCTTTGCTAAG+TGG | - | chr3.4:65286919-65286938 | MS.gene05093:intron | 30.0% | |
| CAAGAGGTAAAATGAAGTAA+AGG | + | chr3.4:65285782-65285801 | None:intergenic | 30.0% | |
| CATCTCCGTCAAATAATTAA+TGG | + | chr3.4:65290305-65290324 | None:intergenic | 30.0% | |
| CATGATAAGTTTACCATCAA+TGG | - | chr3.4:65286103-65286122 | MS.gene05093:intron | 30.0% | |
| GACAATGCATAATATATGCA+AGG | + | chr3.4:65289593-65289612 | None:intergenic | 30.0% | |
| GATATCAAACAAGAAGAAAC+AGG | + | chr3.4:65286225-65286244 | None:intergenic | 30.0% | |
| GATCTTATCAGATCTATTCA+AGG | - | chr3.4:65285801-65285820 | MS.gene05093:intron | 30.0% | |
| GATTGAAATCTAACAGAAAC+GGG | + | chr3.4:65286200-65286219 | None:intergenic | 30.0% | |
| GTGTAAACAAAAACATGAAC+AGG | + | chr3.4:65287858-65287877 | None:intergenic | 30.0% | |
| TAAAGGATGCAAAAAAAGCA+TGG | + | chr3.4:65285765-65285784 | None:intergenic | 30.0% | |
| TACTTTCATATACAGGTACT+TGG | - | chr3.4:65287074-65287093 | MS.gene05093:intron | 30.0% | |
| TAGGGATGAACATAATTACA+GGG | - | chr3.4:65288372-65288391 | MS.gene05093:intron | 30.0% | |
| TAGTTAGCATAACTAAGATG+TGG | + | chr3.4:65286854-65286873 | None:intergenic | 30.0% | |
| TATATCTCTTCTTCCATTGA+TGG | + | chr3.4:65286119-65286138 | None:intergenic | 30.0% | |
| TCAAAACTTTACATCTGGAA+TGG | - | chr3.4:65287117-65287136 | MS.gene05093:intron | 30.0% | |
| TGAAGAAGTTGCTTATGTTA+TGG | - | chr3.4:65287214-65287233 | MS.gene05093:intron | 30.0% | |
| ! | ACTGTTCTCATTCTTTTGAT+CGG | + | chr3.4:65289989-65290008 | None:intergenic | 30.0% |
| ! | AGATTGAGTCTTTTGATGTA+TGG | - | chr3.4:65287611-65287630 | MS.gene05093:intron | 30.0% |
| ! | CTCCTTTTGTAAATCTAAGA+TGG | - | chr3.4:65286989-65287008 | MS.gene05093:intron | 30.0% |
| ! | GTTATGAATGAGCTATGTTT+TGG | - | chr3.4:65287282-65287301 | MS.gene05093:intron | 30.0% |
| ! | TATTTAAGGTTCTACACCAT+GGG | - | chr3.4:65286881-65286900 | MS.gene05093:intron | 30.0% |
| ! | TTAGACAAAACTTTGAAAGC+AGG | + | chr3.4:65286533-65286552 | None:intergenic | 30.0% |
| ! | TTATTTAAGGTTCTACACCA+TGG | - | chr3.4:65286880-65286899 | MS.gene05093:intron | 30.0% |
| ! | TTTTGTAGTTGCGGTTTTTT+TGG | + | chr3.4:65290488-65290507 | None:intergenic | 30.0% |
| !! | AGGTTATTTTCTAACAGATC+TGG | - | chr3.4:65286358-65286377 | MS.gene05093:intron | 30.0% |
| !! | ATTTGGAATTTTCCAGCTTT+GGG | - | chr3.4:65286389-65286408 | MS.gene05093:intron | 30.0% |
| !! | CTTGTTTTCATTTTGTTTCC+GGG | + | chr3.4:65286697-65286716 | None:intergenic | 30.0% |
| !! | TATCCAAGTTGGTTTGTAAA+GGG | + | chr3.4:65289898-65289917 | None:intergenic | 30.0% |
| !! | TATTTGGAATTTTCCAGCTT+TGG | - | chr3.4:65286388-65286407 | MS.gene05093:intron | 30.0% |
| !! | TTATCCAAGTTGGTTTGTAA+AGG | + | chr3.4:65289899-65289918 | None:intergenic | 30.0% |
| !! | TTTGGGTTAACGGAATTTTT+GGG | + | chr3.4:65290596-65290615 | None:intergenic | 30.0% |
| !!! | ATGGTGTTATTTTGGGTTAA+CGG | + | chr3.4:65290606-65290625 | None:intergenic | 30.0% |
| !!! | ATGTCAGTTTTTTGTAGTTG+CGG | + | chr3.4:65290497-65290516 | None:intergenic | 30.0% |
| !!! | CCTTGTTTTCATTTTGTTTC+CGG | + | chr3.4:65286698-65286717 | None:intergenic | 30.0% |
| !!! | CTTCATTTAGTTTTCTCTTC+TGG | - | chr3.4:65287260-65287279 | MS.gene05093:intron | 30.0% |
| !!! | GAGCAATATGGTGTTATTTT+GGG | + | chr3.4:65290613-65290632 | None:intergenic | 30.0% |
| !!! | TAGATTTTGATTGACAAACC+AGG | + | chr3.4:65289328-65289347 | None:intergenic | 30.0% |
| !!! | TGAGCAATATGGTGTTATTT+TGG | + | chr3.4:65290614-65290633 | None:intergenic | 30.0% |
| !!! | TGGAGTATTCTCTTTTTTGA+GGG | + | chr3.4:65290015-65290034 | None:intergenic | 30.0% |
| !!! | TTGGAGTATTCTCTTTTTTG+AGG | + | chr3.4:65290016-65290035 | None:intergenic | 30.0% |
| !!! | TTTCATTGACAACTGGTTTT+TGG | - | chr3.4:65287655-65287674 | MS.gene05093:intron | 30.0% |
| !!! | TTTTGGGTTAACGGAATTTT+TGG | + | chr3.4:65290597-65290616 | None:intergenic | 30.0% |
| !!! | TTTTGTTGAAAGCACTAGAT+GGG | - | chr3.4:65288731-65288750 | MS.gene05093:intron | 30.0% |
| AACTTCTTCAGGTACTACAA+TGG | + | chr3.4:65287204-65287223 | None:intergenic | 35.0% | |
| AAGTCTCTTGTTGAGCAATA+TGG | + | chr3.4:65290625-65290644 | None:intergenic | 35.0% | |
| AATACACCACTAGCATATGA+TGG | + | chr3.4:65286169-65286188 | None:intergenic | 35.0% | |
| AATGCTTTCTCAAACCAAAC+TGG | - | chr3.4:65286762-65286781 | MS.gene05093:intron | 35.0% | |
| AATTAAGAAAAGGCCTAACC+TGG | - | chr3.4:65289818-65289837 | MS.gene05093:CDS | 35.0% | |
| AATTGTCAGCATCAAATGAG+TGG | - | chr3.4:65288338-65288357 | MS.gene05093:CDS | 35.0% | |
| AGAGCTCAAAACTTTACATC+TGG | - | chr3.4:65287112-65287131 | MS.gene05093:intron | 35.0% | |
| ATACACCACTAGCATATGAT+GGG | + | chr3.4:65286168-65286187 | None:intergenic | 35.0% | |
| ATGTGTTCAGTAAGTTGTTG+AGG | + | chr3.4:65288693-65288712 | None:intergenic | 35.0% | |
| CCGGAAACAAAATGAAAACA+AGG | - | chr3.4:65286695-65286714 | MS.gene05093:intron | 35.0% | |
| CTATACTTCACCAAAAAACC+CGG | - | chr3.4:65286676-65286695 | MS.gene05093:intron | 35.0% | |
| CTCAAATATATGCAAGGTTC+GGG | + | chr3.4:65289497-65289516 | None:intergenic | 35.0% | |
| GAAGCATAAACATACAAGCA+AGG | - | chr3.4:65290409-65290428 | MS.gene05093:CDS | 35.0% | |
| GAGCTTTCAGTAGTGTATTA+AGG | - | chr3.4:65288840-65288859 | MS.gene05093:intron | 35.0% | |
| GAGTTCCATATGTTACAAGA+GGG | + | chr3.4:65288762-65288781 | None:intergenic | 35.0% | |
| GCTTTCAGTAGTGTATTAAG+GGG | - | chr3.4:65288842-65288861 | MS.gene05093:intron | 35.0% | |
| GGAAAGTTGAATGGAATAAC+CGG | - | chr3.4:65285638-65285657 | MS.gene05093:CDS | 35.0% | |
| GGAGTTAAAGTACAAAATGC+TGG | - | chr3.4:65287529-65287548 | MS.gene05093:intron | 35.0% | |
| GGTACTGTCTATTATACTCT+TGG | - | chr3.4:65287164-65287183 | MS.gene05093:intron | 35.0% | |
| GTAGAATGCTGCATTTAGAA+GGG | + | chr3.4:65288813-65288832 | None:intergenic | 35.0% | |
| TAAGAAACATAGGCAGTGTT+TGG | - | chr3.4:65287442-65287461 | MS.gene05093:intron | 35.0% | |
| TACATTGAGCTTGAAAGTCA+CGG | - | chr3.4:65288889-65288908 | MS.gene05093:intron | 35.0% | |
| TAGAATGCTGCATTTAGAAG+GGG | + | chr3.4:65288812-65288831 | None:intergenic | 35.0% | |
| TCAAATATATGCAAGGTTCG+GGG | + | chr3.4:65289496-65289515 | None:intergenic | 35.0% | |
| TCAATTTATCATACAGCACG+CGG | + | chr3.4:65287382-65287401 | None:intergenic | 35.0% | |
| TCTATTCAAGGATGATTCAC+AGG | - | chr3.4:65285813-65285832 | MS.gene05093:intron | 35.0% | |
| TCTCATCCAGTAAGAAACAT+AGG | - | chr3.4:65287432-65287451 | MS.gene05093:intron | 35.0% | |
| TGAGTTCCATATGTTACAAG+AGG | + | chr3.4:65288763-65288782 | None:intergenic | 35.0% | |
| TGATTGCTTGCTCAATGTAT+AGG | + | chr3.4:65288961-65288980 | None:intergenic | 35.0% | |
| TGCATAATATATGCAAGGTC+CGG | + | chr3.4:65289588-65289607 | None:intergenic | 35.0% | |
| TGCTTGTATGTTTATGCTTC+TGG | + | chr3.4:65290409-65290428 | None:intergenic | 35.0% | |
| TTCTAAATGCAGCATTCTAC+CGG | - | chr3.4:65288813-65288832 | MS.gene05093:intron | 35.0% | |
| TTCTTTGAACAGTTCTCTAC+AGG | - | chr3.4:65286338-65286357 | MS.gene05093:intron | 35.0% | |
| ! | AAACAACTTGATGACCAGTT+TGG | + | chr3.4:65286779-65286798 | None:intergenic | 35.0% |
| ! | AAATTGTTGTGTGGGTTGTT+TGG | + | chr3.4:65290128-65290147 | None:intergenic | 35.0% |
| ! | ACTGCTCAATTTTCTGTATC+CGG | + | chr3.4:65285614-65285633 | None:intergenic | 35.0% |
| ! | ACTGTTTTCATTTATCCTGC+AGG | - | chr3.4:65287819-65287838 | MS.gene05093:intron | 35.0% |
| ! | ATGTTATACTTGTGGTCTTG+TGG | + | chr3.4:65288486-65288505 | None:intergenic | 35.0% |
| ! | ATTAATGGTTCTTTTCACCG+AGG | - | chr3.4:65286960-65286979 | MS.gene05093:intron | 35.0% |
| ! | CTACTTGATGATCGATCAAA+CGG | - | chr3.4:65288160-65288179 | MS.gene05093:CDS | 35.0% |
| ! | CTGTTCTCATTCTTTTGATC+GGG | + | chr3.4:65289988-65290007 | None:intergenic | 35.0% |
| ! | TTAATGGTTCTTTTCACCGA+GGG | - | chr3.4:65286961-65286980 | MS.gene05093:intron | 35.0% |
| !! | AACTTTTTCTCCCTTACTTC+AGG | - | chr3.4:65287980-65287999 | MS.gene05093:intron | 35.0% |
| !! | AATGGTGTTGCATTGTTCTT+CGG | - | chr3.4:65287135-65287154 | MS.gene05093:intron | 35.0% |
| !! | CATTTTGTTTCCGGGTTTTT+TGG | + | chr3.4:65286689-65286708 | None:intergenic | 35.0% |
| !! | TCGTTATACAAAGGCATTAC+CGG | + | chr3.4:65285660-65285679 | None:intergenic | 35.0% |
| !!! | AAGTTTTGAGCTCTTAAGAC+CGG | + | chr3.4:65287106-65287125 | None:intergenic | 35.0% |
| !!! | CAGATCTGGCTTTTGTTATT+TGG | - | chr3.4:65286372-65286391 | MS.gene05093:intron | 35.0% |
| !!! | CTTTTGTTGAAAGCACTAGA+TGG | - | chr3.4:65288730-65288749 | MS.gene05093:intron | 35.0% |
| !!! | GGAGTATTCTCTTTTTTGAG+GGG | + | chr3.4:65290014-65290033 | None:intergenic | 35.0% |
| ACACTGCCTATGTTTCTTAC+TGG | + | chr3.4:65287441-65287460 | None:intergenic | 40.0% | |
| ACAGAAAATTGAGCAGTGCT+GGG | - | chr3.4:65285617-65285636 | MS.gene05093:CDS | 40.0% | |
| AGTGGTCAAAAGCCTTAATC+AGG | + | chr3.4:65290210-65290229 | None:intergenic | 40.0% | |
| ATAGACCCATCATATGCTAG+TGG | - | chr3.4:65286160-65286179 | MS.gene05093:intron | 40.0% | |
| ATAGGCAGTGTTTGGTAGAA+AGG | - | chr3.4:65287450-65287469 | MS.gene05093:intron | 40.0% | |
| ATGAGTGGTAGTCACTTGAT+AGG | - | chr3.4:65288353-65288372 | MS.gene05093:CDS | 40.0% | |
| ATGTTTATGCTTCTGGCACT+CGG | + | chr3.4:65290402-65290421 | None:intergenic | 40.0% | |
| CATATGGAACTCATCCACAT+TGG | - | chr3.4:65288770-65288789 | MS.gene05093:intron | 40.0% | |
| CTACCCTTTACAAACCAACT+TGG | - | chr3.4:65289892-65289911 | MS.gene05093:intron | 40.0% | |
| CTACTTCCACTACCATGTAA+GGG | + | chr3.4:65289273-65289292 | None:intergenic | 40.0% | |
| CTTGACCACTTAGCAAAGAT+TGG | + | chr3.4:65286927-65286946 | None:intergenic | 40.0% | |
| GACTTTCAAGCTCAATGTAG+AGG | + | chr3.4:65288888-65288907 | None:intergenic | 40.0% | |
| GAGATAGAGATAATCGCACA+CGG | - | chr3.4:65287768-65287787 | MS.gene05093:intron | 40.0% | |
| GCATAATATATGCAAGGTCC+GGG | + | chr3.4:65289587-65289606 | None:intergenic | 40.0% | |
| GGTAGAATGCTGCATTTAGA+AGG | + | chr3.4:65288814-65288833 | None:intergenic | 40.0% | |
| TACAGAAAATTGAGCAGTGC+TGG | - | chr3.4:65285616-65285635 | MS.gene05093:CDS | 40.0% | |
| TACTTCCACTACCATGTAAG+GGG | + | chr3.4:65289272-65289291 | None:intergenic | 40.0% | |
| TCATCAAGTAGCAGGAAATG+TGG | + | chr3.4:65288151-65288170 | None:intergenic | 40.0% | |
| TGAGTGGTAGTCACTTGATA+GGG | - | chr3.4:65288354-65288373 | MS.gene05093:CDS | 40.0% | |
| TGCATTGTCTTTACCAACTG+AGG | - | chr3.4:65289604-65289623 | MS.gene05093:intron | 40.0% | |
| TTCATCACTGATAACACAGG+AGG | + | chr3.4:65288050-65288069 | None:intergenic | 40.0% | |
| TTGAAAACAACGATAGCCCA+TGG | + | chr3.4:65286900-65286919 | None:intergenic | 40.0% | |
| TTGATCGATCATCAAGTAGC+AGG | + | chr3.4:65288159-65288178 | None:intergenic | 40.0% | |
| ! | AAGGCTTTTGACCACTTTGA+TGG | - | chr3.4:65290214-65290233 | MS.gene05093:intron | 40.0% |
| ! | AGAAGGCACATACCTGATTA+AGG | - | chr3.4:65290195-65290214 | MS.gene05093:intron | 40.0% |
| ! | GGCAAAAGCTTTATCCAAGT+TGG | + | chr3.4:65289909-65289928 | None:intergenic | 40.0% |
| ! | TCTAGCTTACATACCAGGTT+AGG | + | chr3.4:65289834-65289853 | None:intergenic | 40.0% |
| ! | TGTTGATTGCAACTGTACTG+AGG | + | chr3.4:65288197-65288216 | None:intergenic | 40.0% |
| ! | TTCTTTTGATCGGGTAGTAG+TGG | + | chr3.4:65289979-65289998 | None:intergenic | 40.0% |
| ! | TTTAGTTCACGGTTGTTCAC+CGG | - | chr3.4:65285592-65285611 | MS.gene05093:CDS | 40.0% |
| !! | AAGAGTTTTGACCATACCCT+TGG | + | chr3.4:65288096-65288115 | None:intergenic | 40.0% |
| !! | AGTTGGTTTGTAAAGGGTAG+AGG | + | chr3.4:65289892-65289911 | None:intergenic | 40.0% |
| !! | ATGGTGTTGCATTGTTCTTC+GGG | - | chr3.4:65287136-65287155 | MS.gene05093:intron | 40.0% |
| !!! | CGGGTTTTTTGGTGAAGTAT+AGG | + | chr3.4:65286678-65286697 | None:intergenic | 40.0% |
| !!! | TGACTGCTGCTTTTAGTTCA+CGG | - | chr3.4:65285581-65285600 | MS.gene05093:CDS | 40.0% |
| ACAACCCAAACAAGTTGCAC+CGG | - | chr3.4:65290376-65290395 | MS.gene05093:CDS | 45.0% | |
| ACCTGCTTCACCTGAAGTAA+GGG | + | chr3.4:65287993-65288012 | None:intergenic | 45.0% | |
| AGCAAGCTGTAGAAACCCAT+TGG | + | chr3.4:65288020-65288039 | None:intergenic | 45.0% | |
| CAAAGAACTCGCCATCAAAG+TGG | + | chr3.4:65290228-65290247 | None:intergenic | 45.0% | |
| CATTTATCCTGCAGGTAGCA+AGG | - | chr3.4:65287827-65287846 | MS.gene05093:intron | 45.0% | |
| CCTACTTCCACTACCATGTA+AGG | + | chr3.4:65289274-65289293 | None:intergenic | 45.0% | |
| CTAAAACGGTACGCATGAGA+GGG | - | chr3.4:65285960-65285979 | MS.gene05093:intron | 45.0% | |
| GAATACCCCTTACATGGTAG+TGG | - | chr3.4:65289264-65289283 | MS.gene05093:CDS | 45.0% | |
| GAGAAAACAGTTCACCAGTC+AGG | - | chr3.4:65287482-65287501 | MS.gene05093:intron | 45.0% | |
| GCAAGCTGTAGAAACCCATT+GGG | + | chr3.4:65288019-65288038 | None:intergenic | 45.0% | |
| GCTCAACAAGAGACTTGACA+AGG | - | chr3.4:65290629-65290648 | MS.gene05093:CDS | 45.0% | |
| GGTGTATGAAGTTCGAATCC+CGG | - | chr3.4:65289566-65289585 | MS.gene05093:intron | 45.0% | |
| GGTTTGTAAAGGGTAGAGGT+GGG | + | chr3.4:65289888-65289907 | None:intergenic | 45.0% | |
| GTACGGCGCAAGTTAAAATC+AGG | - | chr3.4:65287508-65287527 | MS.gene05093:intron | 45.0% | |
| GTTCACCAGTCAGGTTTGTA+CGG | - | chr3.4:65287491-65287510 | MS.gene05093:intron | 45.0% | |
| TAAAACGGTACGCATGAGAG+GGG | - | chr3.4:65285961-65285980 | MS.gene05093:intron | 45.0% | |
| TACAAAAGGAGTTGTGCCCT+CGG | + | chr3.4:65286980-65286999 | None:intergenic | 45.0% | |
| TACCAACTGAGGTAAGCTCA+CGG | - | chr3.4:65289615-65289634 | MS.gene05093:intron | 45.0% | |
| TAGTTGTTTGCGCATCTGGT+GGG | + | chr3.4:65290560-65290579 | None:intergenic | 45.0% | |
| TATTCCAAACCTCCCAAAGC+TGG | + | chr3.4:65286404-65286423 | None:intergenic | 45.0% | |
| TCAAGTAGCAGGAAATGTGG+TGG | + | chr3.4:65288148-65288167 | None:intergenic | 45.0% | |
| TCCAATTCGGAAGCTGAAGA+AGG | - | chr3.4:65290178-65290197 | MS.gene05093:intron | 45.0% | |
| TGCAGCCCTCTTGTAACATA+TGG | - | chr3.4:65288754-65288773 | MS.gene05093:intron | 45.0% | |
| TGGAACTCATCCACATTGGT+TGG | - | chr3.4:65288774-65288793 | MS.gene05093:intron | 45.0% | |
| TGTCTAGTTGTTTGCGCATC+TGG | + | chr3.4:65290564-65290583 | None:intergenic | 45.0% | |
| TTGTCGCATTTGAGCAAGCT+CGG | - | chr3.4:65288926-65288945 | MS.gene05093:intron | 45.0% | |
| ! | AATGGGTTTCTACAGCTTGC+TGG | - | chr3.4:65288019-65288038 | MS.gene05093:intron | 45.0% |
| ! | TGGTTTGTAAAGGGTAGAGG+TGG | + | chr3.4:65289889-65289908 | None:intergenic | 45.0% |
| ! | TTTTGAGCTCTTAAGACCGG+TGG | + | chr3.4:65287103-65287122 | None:intergenic | 45.0% |
| !! | CCTTACATGGTAGTGGAAGT+AGG | - | chr3.4:65289271-65289290 | MS.gene05093:CDS | 45.0% |
| !! | TATGTGGACCCATTTTGACG+AGG | - | chr3.4:65287879-65287898 | MS.gene05093:intron | 45.0% |
| !! | TGGTTCTGGAAGATTGCCAA+GGG | - | chr3.4:65288077-65288096 | MS.gene05093:intron | 45.0% |
| !! | TTGGTTCTGGAAGATTGCCA+AGG | - | chr3.4:65288076-65288095 | MS.gene05093:intron | 45.0% |
| !!! | TGGAATTTTCCAGCTTTGGG+AGG | - | chr3.4:65286392-65286411 | MS.gene05093:intron | 45.0% |
| !!! | TTTTCCAGCTTTGGGAGGTT+TGG | - | chr3.4:65286397-65286416 | MS.gene05093:intron | 45.0% |
| AGAGGTGGGAATATGTCTCG+TGG | + | chr3.4:65289874-65289893 | None:intergenic | 50.0% | |
| AGTTGTTTGCGCATCTGGTG+GGG | + | chr3.4:65290559-65290578 | None:intergenic | 50.0% | |
| ATGCTGCATTTAGAAGGGGC+TGG | + | chr3.4:65288808-65288827 | None:intergenic | 50.0% | |
| CACTACTGAAAGCTCGCTTC+CGG | + | chr3.4:65288835-65288854 | None:intergenic | 50.0% | |
| CGTGCAGACCTCGTCAAAAT+GGG | + | chr3.4:65287890-65287909 | None:intergenic | 50.0% | |
| CTAGTTGTTTGCGCATCTGG+TGG | + | chr3.4:65290561-65290580 | None:intergenic | 50.0% | |
| CTGGAAGATTGCCAAGGGTA+TGG | - | chr3.4:65288082-65288101 | MS.gene05093:intron | 50.0% | |
| GAATATGTCTCGTGGTCGAC+TGG | + | chr3.4:65289866-65289885 | None:intergenic | 50.0% | |
| GACCTGCTTCACCTGAAGTA+AGG | + | chr3.4:65287994-65288013 | None:intergenic | 50.0% | |
| GCCTTCTTCAGCTTCCGAAT+TGG | + | chr3.4:65290182-65290201 | None:intergenic | 50.0% | |
| GCGAACGAATACCCCTTACA+TGG | - | chr3.4:65289258-65289277 | MS.gene05093:CDS | 50.0% | |
| GCTAAAACGGTACGCATGAG+AGG | - | chr3.4:65285959-65285978 | MS.gene05093:intron | 50.0% | |
| GGAAAATCCTTGCTACCTGC+AGG | + | chr3.4:65287837-65287856 | None:intergenic | 50.0% | |
| GGATGAGCAACCAACCAATG+TGG | + | chr3.4:65288787-65288806 | None:intergenic | 50.0% | |
| GTGAAGCAGGTCTTCCCAAT+GGG | - | chr3.4:65288002-65288021 | MS.gene05093:intron | 50.0% | |
| GTGTTGCATTGTTCTTCGGG+TGG | - | chr3.4:65287139-65287158 | MS.gene05093:intron | 50.0% | |
| TACAGGTACTTGGACACCAC+CGG | - | chr3.4:65287084-65287103 | MS.gene05093:intron | 50.0% | |
| TCCCTTACTTCAGGTGAAGC+AGG | - | chr3.4:65287989-65288008 | MS.gene05093:intron | 50.0% | |
| TGCATTGTTCTTCGGGTGGT+TGG | - | chr3.4:65287143-65287162 | MS.gene05093:intron | 50.0% | |
| ! | GCAGTGCTGGGAAAGTTGAA+TGG | - | chr3.4:65285629-65285648 | MS.gene05093:CDS | 50.0% |
| CTCCGTGAGCTTACCTCAGT+TGG | + | chr3.4:65289620-65289639 | None:intergenic | 55.0% | |
| GCGTGCAGACCTCGTCAAAA+TGG | + | chr3.4:65287891-65287910 | None:intergenic | 55.0% | |
| GGTGAAGCAGGTCTTCCCAA+TGG | - | chr3.4:65288001-65288020 | MS.gene05093:intron | 55.0% | |
| GTTGTTTGCGCATCTGGTGG+GGG | + | chr3.4:65290558-65290577 | None:intergenic | 55.0% | |
| TTATGCTTCTGGCACTCGGC+CGG | + | chr3.4:65290398-65290417 | None:intergenic | 55.0% | |
| TTGCGCCGTACAAACCTGAC+TGG | + | chr3.4:65287499-65287518 | None:intergenic | 55.0% | |
| ! | TCGGCCGGTGCAACTTGTTT+GGG | + | chr3.4:65290383-65290402 | None:intergenic | 55.0% |
| !! | GGGTTTCTACAGCTTGCTGG+TGG | - | chr3.4:65288022-65288041 | MS.gene05093:intron | 55.0% |
| !! | TGGGGGTGTGGGGTTGTTTT+TGG | + | chr3.4:65290541-65290560 | None:intergenic | 55.0% |
| ACTCATCAGCGGGCGCACAT+TGG | - | chr3.4:65290460-65290479 | MS.gene05093:CDS | 60.0% | |
| ! | CTCGGCCGGTGCAACTTGTT+TGG | + | chr3.4:65290384-65290403 | None:intergenic | 60.0% |
| TTGCGCATCTGGTGGGGGTG+TGG | + | chr3.4:65290553-65290572 | None:intergenic | 65.0% | |
| ! | TGCGCATCTGGTGGGGGTGT+GGG | + | chr3.4:65290552-65290571 | None:intergenic | 65.0% |
| ! | GCGCATCTGGTGGGGGTGTG+GGG | + | chr3.4:65290551-65290570 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 65285556 | 65290674 | 65285556 | ID=MS.gene05093 |
| chr3.4 | mRNA | 65285556 | 65290674 | 65285556 | ID=MS.gene05093.t1;Parent=MS.gene05093 |
| chr3.4 | exon | 65290571 | 65290674 | 65290571 | ID=MS.gene05093.t1.exon1;Parent=MS.gene05093.t1 |
| chr3.4 | CDS | 65290571 | 65290674 | 65290571 | ID=cds.MS.gene05093.t1;Parent=MS.gene05093.t1 |
| chr3.4 | exon | 65290345 | 65290483 | 65290345 | ID=MS.gene05093.t1.exon2;Parent=MS.gene05093.t1 |
| chr3.4 | CDS | 65290345 | 65290483 | 65290345 | ID=cds.MS.gene05093.t1;Parent=MS.gene05093.t1 |
| chr3.4 | exon | 65289806 | 65289880 | 65289806 | ID=MS.gene05093.t1.exon3;Parent=MS.gene05093.t1 |
| chr3.4 | CDS | 65289806 | 65289880 | 65289806 | ID=cds.MS.gene05093.t1;Parent=MS.gene05093.t1 |
| chr3.4 | exon | 65289220 | 65289341 | 65289220 | ID=MS.gene05093.t1.exon4;Parent=MS.gene05093.t1 |
| chr3.4 | CDS | 65289220 | 65289341 | 65289220 | ID=cds.MS.gene05093.t1;Parent=MS.gene05093.t1 |
| chr3.4 | exon | 65289066 | 65289141 | 65289066 | ID=MS.gene05093.t1.exon5;Parent=MS.gene05093.t1 |
| chr3.4 | CDS | 65289066 | 65289141 | 65289066 | ID=cds.MS.gene05093.t1;Parent=MS.gene05093.t1 |
| chr3.4 | exon | 65288330 | 65288389 | 65288330 | ID=MS.gene05093.t1.exon6;Parent=MS.gene05093.t1 |
| chr3.4 | CDS | 65288330 | 65288389 | 65288330 | ID=cds.MS.gene05093.t1;Parent=MS.gene05093.t1 |
| chr3.4 | exon | 65288132 | 65288228 | 65288132 | ID=MS.gene05093.t1.exon7;Parent=MS.gene05093.t1 |
| chr3.4 | CDS | 65288132 | 65288228 | 65288132 | ID=cds.MS.gene05093.t1;Parent=MS.gene05093.t1 |
| chr3.4 | exon | 65285556 | 65285698 | 65285556 | ID=MS.gene05093.t1.exon8;Parent=MS.gene05093.t1 |
| chr3.4 | CDS | 65285556 | 65285698 | 65285556 | ID=cds.MS.gene05093.t1;Parent=MS.gene05093.t1 |
| Gene Sequence |
| Protein sequence |
