Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019391.t1 | XP_003627656.2 | 99.5 | 212 | 1 | 0 | 1 | 212 | 2 | 213 | 2.80E-118 | 434.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019391.t1 | Q9SWE5 | 78.9 | 199 | 41 | 1 | 12 | 210 | 9 | 206 | 1.1e-94 | 347.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019391.t1 | G7LCR5 | 99.5 | 212 | 1 | 0 | 1 | 212 | 2 | 213 | 2.1e-118 | 434.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene87828 | MS.gene019391 | PPI |
| MS.gene019391 | MS.gene87828 | PPI |
| MS.gene23647 | MS.gene019391 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019391.t1 | MTR_8g035610 | 99.528 | 212 | 1 | 0 | 1 | 212 | 2 | 213 | 1.34e-159 | 439 |
| MS.gene019391.t1 | MTR_8g035610 | 99.497 | 199 | 1 | 0 | 14 | 212 | 1 | 199 | 1.98e-149 | 413 |
| MS.gene019391.t1 | MTR_7g075760 | 57.653 | 196 | 80 | 2 | 8 | 202 | 5 | 198 | 1.27e-80 | 239 |
| MS.gene019391.t1 | MTR_7g076050 | 57.653 | 196 | 80 | 2 | 8 | 202 | 5 | 198 | 1.27e-80 | 239 |
| MS.gene019391.t1 | MTR_7g076070 | 56.731 | 208 | 77 | 3 | 1 | 204 | 2 | 200 | 3.69e-77 | 231 |
| MS.gene019391.t1 | MTR_7g075710 | 57.971 | 207 | 74 | 4 | 1 | 203 | 1 | 198 | 1.15e-76 | 229 |
| MS.gene019391.t1 | MTR_7g075750 | 57.812 | 192 | 76 | 2 | 14 | 204 | 1 | 188 | 5.01e-73 | 219 |
| MS.gene019391.t1 | MTR_7g076045 | 59.231 | 130 | 47 | 2 | 75 | 204 | 5 | 128 | 9.46e-47 | 151 |
| MS.gene019391.t1 | MTR_7g074480 | 60.784 | 51 | 15 | 2 | 109 | 159 | 3 | 48 | 3.31e-12 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019391.t1 | AT3G18030 | 78.894 | 199 | 41 | 1 | 12 | 210 | 9 | 206 | 5.84e-124 | 349 |
| MS.gene019391.t1 | AT1G48605 | 76.923 | 195 | 44 | 1 | 13 | 207 | 2 | 195 | 6.38e-118 | 333 |
Find 53 sgRNAs with CRISPR-Local
Find 122 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAACTGAACTCACAGGTTC+TGG | 0.249432 | 8.2:-63698019 | None:intergenic |
| AGGTTAGCTTGTGGGGATTA+TGG | 0.262541 | 8.2:+63699761 | MS.gene019391:CDS |
| GAGCCTTACAGTAGAGTAAA+TGG | 0.285370 | 8.2:-63699810 | None:intergenic |
| GAGTAAAATCCGAGGCTTCC+TGG | 0.300240 | 8.2:-63698071 | None:intergenic |
| GTTCCACATAAAAGTGTTCA+TGG | 0.333551 | 8.2:-63699666 | None:intergenic |
| TTTGTCATTGTTTCACTGAA+TGG | 0.370610 | 8.2:+63698134 | MS.gene019391:CDS |
| TGTTTGCTGTTGTAGATTGC+TGG | 0.375544 | 8.2:+63699569 | MS.gene019391:intron |
| TCACATGTATCGTGCGAGCC+TGG | 0.385273 | 8.2:+63699612 | MS.gene019391:CDS |
| CAAGCTAACCTCTTTGTAAC+AGG | 0.386122 | 8.2:-63699749 | None:intergenic |
| AGTAAAATCCGAGGCTTCCT+GGG | 0.419242 | 8.2:-63698070 | None:intergenic |
| TTGTCATTGTTTCACTGAAT+GGG | 0.424119 | 8.2:+63698135 | MS.gene019391:CDS |
| TTCACATTGAGCTTCGCAAA+TGG | 0.429618 | 8.2:+63698287 | MS.gene019391:CDS |
| CGTATACAAAATCACATCCT+TGG | 0.455438 | 8.2:-63698218 | None:intergenic |
| TGTATACGGACGACGATGAA+TGG | 0.456117 | 8.2:+63698233 | MS.gene019391:CDS |
| CAACTGAACTCACAGGTTCT+GGG | 0.458227 | 8.2:-63698018 | None:intergenic |
| CCATTGTCGGCAAACACTCT+TGG | 0.468148 | 8.2:+63698331 | MS.gene019391:CDS |
| TTACAAAGAGGTTAGCTTGT+GGG | 0.472912 | 8.2:+63699753 | MS.gene019391:CDS |
| CTACCATTTACTCTACTGTA+AGG | 0.476278 | 8.2:+63699807 | MS.gene019391:CDS |
| TCACATTGAGCTTCGCAAAT+GGG | 0.477326 | 8.2:+63698288 | MS.gene019391:CDS |
| CACATGTATCGTGCGAGCCT+GGG | 0.485764 | 8.2:+63699613 | MS.gene019391:CDS |
| CTCATCTCCATTGACGAGCT+TGG | 0.486057 | 8.2:+63699710 | MS.gene019391:CDS |
| ACAGTAGAGTAAATGGTAGA+AGG | 0.491124 | 8.2:-63699803 | None:intergenic |
| ATGGCTGGTGCAACAAAGAA+TGG | 0.494922 | 8.2:-63699647 | None:intergenic |
| AGAAATACCAAGCTCGTCAA+TGG | 0.495582 | 8.2:-63699717 | None:intergenic |
| TCGCAAATGGGCTGATATCA+TGG | 0.497396 | 8.2:+63698300 | MS.gene019391:CDS |
| CCAAGAGTGTTTGCCGACAA+TGG | 0.502597 | 8.2:-63698331 | None:intergenic |
| CATGGTCATTGCTCCATTGT+CGG | 0.504477 | 8.2:+63698318 | MS.gene019391:CDS |
| GTATACAAAATCACATCCTT+GGG | 0.508904 | 8.2:-63698217 | None:intergenic |
| CACATAAAAGTGTTCATGGC+TGG | 0.518632 | 8.2:-63699662 | None:intergenic |
| TACAAAGAGGTTAGCTTGTG+GGG | 0.520289 | 8.2:+63699754 | MS.gene019391:CDS |
| CCAGAACCTGTGAGTTCAGT+TGG | 0.528188 | 8.2:+63698019 | MS.gene019391:CDS |
| ATGAGATGCCGCTCTGTGAA+AGG | 0.531219 | 8.2:-63699692 | None:intergenic |
| GAATGGCTTGCTATAGTCCC+AGG | 0.538623 | 8.2:-63699630 | None:intergenic |
| TGCTGTTGTAGATTGCTGGA+GGG | 0.541864 | 8.2:+63699573 | MS.gene019391:intron |
| ACGACGATGAATGGTCTAGT+TGG | 0.542274 | 8.2:+63698242 | MS.gene019391:CDS |
| GCTTGTGGGGATTATGGCAA+TGG | 0.544428 | 8.2:+63699767 | MS.gene019391:CDS |
| GGATTATGGCAATGGTGCAA+TGG | 0.551856 | 8.2:+63699775 | MS.gene019391:CDS |
| TGAACTCACAGGTTCTGGGC+TGG | 0.571240 | 8.2:-63698014 | None:intergenic |
| TCAAAGGCTCAGCAAGGTAA+CGG | 0.571549 | 8.2:+63699842 | MS.gene019391:CDS |
| TGGTCTAGTTGGAAGAAACT+AGG | 0.573969 | 8.2:+63698253 | MS.gene019391:CDS |
| TCATTCCACCTGTTACAAAG+AGG | 0.579111 | 8.2:+63699741 | MS.gene019391:CDS |
| GCTAACCTCTTTGTAACAGG+TGG | 0.589007 | 8.2:-63699746 | None:intergenic |
| TTCTCTCCAACTGAACTCAC+AGG | 0.597337 | 8.2:-63698025 | None:intergenic |
| GTCGGCAAACACTCTTGGCA+AGG | 0.605734 | 8.2:+63698336 | MS.gene019391:CDS |
| TTGCTGTTGTAGATTGCTGG+AGG | 0.607972 | 8.2:+63699572 | MS.gene019391:intron |
| TGAAAGAACAGCGATTCCCA+AGG | 0.623450 | 8.2:+63698201 | MS.gene019391:CDS |
| TATGAGTCAAAGGCTCAGCA+AGG | 0.625267 | 8.2:+63699836 | MS.gene019391:CDS |
| TACTAGTGGAAGTGTTGCTG+CGG | 0.634094 | 8.2:+63698096 | MS.gene019391:CDS |
| GTTACAAAGAGGTTAGCTTG+TGG | 0.645490 | 8.2:+63699752 | MS.gene019391:CDS |
| GTAAAATCCGAGGCTTCCTG+GGG | 0.650776 | 8.2:-63698069 | None:intergenic |
| CTAGTAGCGAGTAAAATCCG+AGG | 0.704126 | 8.2:-63698079 | None:intergenic |
| GGAACAATCCTTTCACAGAG+CGG | 0.724970 | 8.2:+63699684 | MS.gene019391:CDS |
| TAAAATCCGAGGCTTCCTGG+GGG | 0.763745 | 8.2:-63698068 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATTCTATCTACTTATAA+AGG | + | chr8.2:63698391-63698410 | MS.gene019391:intron | 15.0% |
| !! | TTAGAAATTGTAAAAGAAAA+TGG | - | chr8.2:63698496-63698515 | None:intergenic | 15.0% |
| !!! | AATGTTTTTAGAAAGTTAAT+AGG | + | chr8.2:63698699-63698718 | MS.gene019391:intron | 15.0% |
| !! | ATGTTAGGATTATAGAATAA+AGG | - | chr8.2:63699445-63699464 | None:intergenic | 20.0% |
| !! | TGTTAGGATTATAGAATAAA+GGG | - | chr8.2:63699444-63699463 | None:intergenic | 20.0% |
| !! | TGTTAGTTAGATTTCTATTT+GGG | - | chr8.2:63699034-63699053 | None:intergenic | 20.0% |
| !! | TTCAGTTTAAATTACTAACA+AGG | - | chr8.2:63698653-63698672 | None:intergenic | 20.0% |
| !! | TTGTTAGTTAGATTTCTATT+TGG | - | chr8.2:63699035-63699054 | None:intergenic | 20.0% |
| ! | ACCTTCTATTACAAAAGAAA+GGG | + | chr8.2:63698950-63698969 | MS.gene019391:intron | 25.0% |
| ! | ATTACAAAAGAAAGGGATAA+TGG | + | chr8.2:63698957-63698976 | MS.gene019391:intron | 25.0% |
| ! | GCATATATCTTAGTTGTAAT+TGG | - | chr8.2:63698891-63698910 | None:intergenic | 25.0% |
| ! | GTTGAATTGAAAATGAAAAC+AGG | - | chr8.2:63698436-63698455 | None:intergenic | 25.0% |
| ! | TCTATAATCCTAACATATGA+TGG | + | chr8.2:63699449-63699468 | MS.gene019391:intron | 25.0% |
| ! | TTACAAAAGAAAGGGATAAT+GGG | + | chr8.2:63698958-63698977 | MS.gene019391:intron | 25.0% |
| ACAACTAAGATATATGCCAA+AGG | + | chr8.2:63698894-63698913 | MS.gene019391:intron | 30.0% | |
| CAATTGTGATAGTAAGAAGA+TGG | - | chr8.2:63698607-63698626 | None:intergenic | 30.0% | |
| GAAAATGAAAACAGGAAACA+TGG | - | chr8.2:63698428-63698447 | None:intergenic | 30.0% | |
| GACCTTCTATTACAAAAGAA+AGG | + | chr8.2:63698949-63698968 | MS.gene019391:intron | 30.0% | |
| GTATACAAAATCACATCCTT+GGG | - | chr8.2:63698220-63698239 | None:intergenic | 30.0% | |
| GTGTATGTACATCTTATGTA+TGG | + | chr8.2:63699478-63699497 | MS.gene019391:intron | 30.0% | |
| TACACAACATGTGAAGAATT+CGG | - | chr8.2:63699299-63699318 | None:intergenic | 30.0% | |
| TCTAGAAACAATACAAACAG+TGG | - | chr8.2:63698560-63698579 | None:intergenic | 30.0% | |
| TTACTATGAGTTAGTTAGCT+AGG | - | chr8.2:63699065-63699084 | None:intergenic | 30.0% | |
| TTGTCATTGTTTCACTGAAT+GGG | + | chr8.2:63698135-63698154 | MS.gene019391:CDS | 30.0% | |
| TTTGTCATTGTTTCACTGAA+TGG | + | chr8.2:63698134-63698153 | MS.gene019391:CDS | 30.0% | |
| ! | AAAATGCAAAGACGATTTTG+TGG | - | chr8.2:63698179-63698198 | None:intergenic | 30.0% |
| ! | CAAGGATGTGATTTTGTATA+CGG | + | chr8.2:63698219-63698238 | MS.gene019391:CDS | 30.0% |
| ! | TCCCTTTCTTTTGTAATAGA+AGG | - | chr8.2:63698954-63698973 | None:intergenic | 30.0% |
| !! | TTTTGTTGTATTTCCGTTAC+AGG | - | chr8.2:63699004-63699023 | None:intergenic | 30.0% |
| AAAGAAAGGATAACGCTGAT+TGG | + | chr8.2:63699216-63699235 | MS.gene019391:intron | 35.0% | |
| AATCAGCGTTATCCTTTCTT+TGG | - | chr8.2:63699217-63699236 | None:intergenic | 35.0% | |
| ACAACTGACCATCATATGTT+AGG | - | chr8.2:63699460-63699479 | None:intergenic | 35.0% | |
| ACAGTAGAGTAAATGGTAGA+AGG | - | chr8.2:63699806-63699825 | None:intergenic | 35.0% | |
| ACATAATTCGCAATTCGCAT+TGG | - | chr8.2:63699342-63699361 | None:intergenic | 35.0% | |
| AGTAACATAATTCGTGCACT+AGG | + | chr8.2:63699080-63699099 | MS.gene019391:intron | 35.0% | |
| ATAGTAAGAAGATGGAAGAC+TGG | - | chr8.2:63698599-63698618 | None:intergenic | 35.0% | |
| CGTATACAAAATCACATCCT+TGG | - | chr8.2:63698221-63698240 | None:intergenic | 35.0% | |
| CTACCATTTACTCTACTGTA+AGG | + | chr8.2:63699807-63699826 | MS.gene019391:CDS | 35.0% | |
| GCGTTGCTAACATCATATAA+CGG | - | chr8.2:63698784-63698803 | None:intergenic | 35.0% | |
| ! | AAGGCTCTTTTATGAGTCAA+AGG | + | chr8.2:63699826-63699845 | MS.gene019391:CDS | 35.0% |
| ! | ACGCTGATTGGTGAAAAAAA+CGG | + | chr8.2:63699228-63699247 | MS.gene019391:intron | 35.0% |
| !! | AAAGAAAGGGATAATGGGTA+AGG | + | chr8.2:63698963-63698982 | MS.gene019391:intron | 35.0% |
| !! | GCTAACATCATATAACGGAT+AGG | - | chr8.2:63698779-63698798 | None:intergenic | 35.0% |
| !! | GTTCCACATAAAAGTGTTCA+TGG | - | chr8.2:63699669-63699688 | None:intergenic | 35.0% |
| !! | TTACAAAGAGGTTAGCTTGT+GGG | + | chr8.2:63699753-63699772 | MS.gene019391:CDS | 35.0% |
| !! | TTCCCTTAGAAAAGTACCTT+TGG | - | chr8.2:63698913-63698932 | None:intergenic | 35.0% |
| !!! | ATGCCAAAGGTACTTTTCTA+AGG | + | chr8.2:63698907-63698926 | MS.gene019391:intron | 35.0% |
| !!! | TGCCAAAGGTACTTTTCTAA+GGG | + | chr8.2:63698908-63698927 | MS.gene019391:intron | 35.0% |
| ACAGGAAACATGGAAGCAAA+CGG | - | chr8.2:63698418-63698437 | None:intergenic | 40.0% | |
| ACATCGTCACACAAACTTGT+CGG | - | chr8.2:63698753-63698772 | None:intergenic | 40.0% | |
| AGAAATACCAAGCTCGTCAA+TGG | - | chr8.2:63699720-63699739 | None:intergenic | 40.0% | |
| CAAGCTAACCTCTTTGTAAC+AGG | - | chr8.2:63699752-63699771 | None:intergenic | 40.0% | |
| CCTTAGCAACTAACCTGTAA+CGG | + | chr8.2:63698988-63699007 | MS.gene019391:intron | 40.0% | |
| CTTGTCGGAACTAAAGCAAT+TGG | - | chr8.2:63698738-63698757 | None:intergenic | 40.0% | |
| GAGCCTTACAGTAGAGTAAA+TGG | - | chr8.2:63699813-63699832 | None:intergenic | 40.0% | |
| GAGTTAGTTAGCTAGGTTCA+AGG | - | chr8.2:63699058-63699077 | None:intergenic | 40.0% | |
| TATGTAGCAGTACCCGAATT+CGG | - | chr8.2:63699142-63699161 | None:intergenic | 40.0% | |
| TCACATTGAGCTTCGCAAAT+GGG | + | chr8.2:63698288-63698307 | MS.gene019391:CDS | 40.0% | |
| TCATTCCACCTGTTACAAAG+AGG | + | chr8.2:63699741-63699760 | MS.gene019391:CDS | 40.0% | |
| TGGTCTAGTTGGAAGAAACT+AGG | + | chr8.2:63698253-63698272 | MS.gene019391:CDS | 40.0% | |
| TTCACATTGAGCTTCGCAAA+TGG | + | chr8.2:63698287-63698306 | MS.gene019391:CDS | 40.0% | |
| TTGAGATGCATCAATTCACG+TGG | + | chr8.2:63699162-63699181 | MS.gene019391:intron | 40.0% | |
| ! | CAGCCATGAACACTTTTATG+TGG | + | chr8.2:63699663-63699682 | MS.gene019391:CDS | 40.0% |
| !! | CACATAAAAGTGTTCATGGC+TGG | - | chr8.2:63699665-63699684 | None:intergenic | 40.0% |
| !! | GGTACTTTTCTAAGGGAAGA+AGG | + | chr8.2:63698915-63698934 | MS.gene019391:intron | 40.0% |
| !! | GTTACAAAGAGGTTAGCTTG+TGG | + | chr8.2:63699752-63699771 | MS.gene019391:CDS | 40.0% |
| !! | TACAAAGAGGTTAGCTTGTG+GGG | + | chr8.2:63699754-63699773 | MS.gene019391:CDS | 40.0% |
| !! | TGTTTGCTGTTGTAGATTGC+TGG | + | chr8.2:63699569-63699588 | MS.gene019391:intron | 40.0% |
| ACGACGATGAATGGTCTAGT+TGG | + | chr8.2:63698242-63698261 | MS.gene019391:CDS | 45.0% | |
| AGTAAAATCCGAGGCTTCCT+GGG | - | chr8.2:63698073-63698092 | None:intergenic | 45.0% | |
| ATACCAGGCGTACCAAAGAA+AGG | + | chr8.2:63699202-63699221 | MS.gene019391:intron | 45.0% | |
| ATGGCTGGTGCAACAAAGAA+TGG | - | chr8.2:63699650-63699669 | None:intergenic | 45.0% | |
| CAACTGAACTCACAGGTTCT+GGG | - | chr8.2:63698021-63698040 | None:intergenic | 45.0% | |
| CAGGAAACATGGAAGCAAAC+GGG | - | chr8.2:63698417-63698436 | None:intergenic | 45.0% | |
| CATGGTCATTGCTCCATTGT+CGG | + | chr8.2:63698318-63698337 | MS.gene019391:CDS | 45.0% | |
| CTAGTAGCGAGTAAAATCCG+AGG | - | chr8.2:63698082-63698101 | None:intergenic | 45.0% | |
| GATGTTAGCAACGCAAGAGT+TGG | + | chr8.2:63698790-63698809 | MS.gene019391:intron | 45.0% | |
| GCTAACCTCTTTGTAACAGG+TGG | - | chr8.2:63699749-63699768 | None:intergenic | 45.0% | |
| GGAACAATCCTTTCACAGAG+CGG | + | chr8.2:63699684-63699703 | MS.gene019391:CDS | 45.0% | |
| GGATTATGGCAATGGTGCAA+TGG | + | chr8.2:63699775-63699794 | MS.gene019391:CDS | 45.0% | |
| TATCCTTTCTTTGGTACGCC+TGG | - | chr8.2:63699208-63699227 | None:intergenic | 45.0% | |
| TATGAGTCAAAGGCTCAGCA+AGG | + | chr8.2:63699836-63699855 | MS.gene019391:CDS | 45.0% | |
| TCAAAGGCTCAGCAAGGTAA+CGG | + | chr8.2:63699842-63699861 | MS.gene019391:CDS | 45.0% | |
| TGAAAGAACAGCGATTCCCA+AGG | + | chr8.2:63698201-63698220 | MS.gene019391:CDS | 45.0% | |
| TGCTGTTGTAGATTGCTGGA+GGG | + | chr8.2:63699573-63699592 | MS.gene019391:intron | 45.0% | |
| TGTATACGGACGACGATGAA+TGG | + | chr8.2:63698233-63698252 | MS.gene019391:CDS | 45.0% | |
| TTCTCTCCAACTGAACTCAC+AGG | - | chr8.2:63698028-63698047 | None:intergenic | 45.0% | |
| TTTCTTTGGTACGCCTGGTA+TGG | - | chr8.2:63699203-63699222 | None:intergenic | 45.0% | |
| TTTGCACAAACTGCCATACC+AGG | + | chr8.2:63699187-63699206 | MS.gene019391:intron | 45.0% | |
| ! | AAGAAGATGGAAGACTGGCT+AGG | - | chr8.2:63698594-63698613 | None:intergenic | 45.0% |
| ! | CCGTTACAGGTTAGTTGCTA+AGG | - | chr8.2:63698991-63699010 | None:intergenic | 45.0% |
| ! | CGGATTTTACTCGCTACTAG+TGG | + | chr8.2:63698082-63698101 | MS.gene019391:CDS | 45.0% |
| ! | TCGCAATTCGCATTGGTACA+CGG | - | chr8.2:63699335-63699354 | None:intergenic | 45.0% |
| ! | TTGCTGTTGTAGATTGCTGG+AGG | + | chr8.2:63699572-63699591 | MS.gene019391:intron | 45.0% |
| !! | AATTCGCGAGTACCGAATTC+GGG | + | chr8.2:63699127-63699146 | MS.gene019391:intron | 45.0% |
| !! | AGGTTAGCTTGTGGGGATTA+TGG | + | chr8.2:63699761-63699780 | MS.gene019391:CDS | 45.0% |
| !! | CAATTCGCGAGTACCGAATT+CGG | + | chr8.2:63699126-63699145 | MS.gene019391:intron | 45.0% |
| !! | TACTAGTGGAAGTGTTGCTG+CGG | + | chr8.2:63698096-63698115 | MS.gene019391:CDS | 45.0% |
| !! | TCGCAAATGGGCTGATATCA+TGG | + | chr8.2:63698300-63698319 | MS.gene019391:CDS | 45.0% |
| ATGAGATGCCGCTCTGTGAA+AGG | - | chr8.2:63699695-63699714 | None:intergenic | 50.0% | |
| CCAACTGAACTCACAGGTTC+TGG | - | chr8.2:63698022-63698041 | None:intergenic | 50.0% | |
| CCAGAACCTGTGAGTTCAGT+TGG | + | chr8.2:63698019-63698038 | MS.gene019391:CDS | 50.0% | |
| CCATTGTCGGCAAACACTCT+TGG | + | chr8.2:63698331-63698350 | MS.gene019391:CDS | 50.0% | |
| CGAATTCGGTACTCGCGAAT+TGG | - | chr8.2:63699128-63699147 | None:intergenic | 50.0% | |
| CTCATCTCCATTGACGAGCT+TGG | + | chr8.2:63699710-63699729 | MS.gene019391:CDS | 50.0% | |
| GAGTAAAATCCGAGGCTTCC+TGG | - | chr8.2:63698074-63698093 | None:intergenic | 50.0% | |
| GCTTGTGGGGATTATGGCAA+TGG | + | chr8.2:63699767-63699786 | MS.gene019391:CDS | 50.0% | |
| GTAAAATCCGAGGCTTCCTG+GGG | - | chr8.2:63698072-63698091 | None:intergenic | 50.0% | |
| TAAAATCCGAGGCTTCCTGG+GGG | - | chr8.2:63698071-63698090 | None:intergenic | 50.0% | |
| ! | CGAATTGGTTCACGCCTTCA+CGG | - | chr8.2:63699113-63699132 | None:intergenic | 50.0% |
| ! | TTCGCATTGGTACACGGTAC+AGG | - | chr8.2:63699329-63699348 | None:intergenic | 50.0% |
| !! | CCAAGAGTGTTTGCCGACAA+TGG | - | chr8.2:63698334-63698353 | None:intergenic | 50.0% |
| !! | GAATGGCTTGCTATAGTCCC+AGG | - | chr8.2:63699633-63699652 | None:intergenic | 50.0% |
| CACATGTATCGTGCGAGCCT+GGG | + | chr8.2:63699613-63699632 | MS.gene019391:CDS | 55.0% | |
| CACTAGGCAGAGAACCGTGA+AGG | + | chr8.2:63699096-63699115 | MS.gene019391:intron | 55.0% | |
| GAGAGCAAGCTCTTCTGCAC+TGG | + | chr8.2:63698857-63698876 | MS.gene019391:intron | 55.0% | |
| GTCGGCAAACACTCTTGGCA+AGG | + | chr8.2:63698336-63698355 | MS.gene019391:CDS | 55.0% | |
| TCACATGTATCGTGCGAGCC+TGG | + | chr8.2:63699612-63699631 | MS.gene019391:CDS | 55.0% | |
| TGGTACACGGTACAGGTTCG+CGG | - | chr8.2:63699322-63699341 | None:intergenic | 55.0% | |
| !! | TGAACTCACAGGTTCTGGGC+TGG | - | chr8.2:63698017-63698036 | None:intergenic | 55.0% |
| CAGTGAATGCTGCTGCCCCC+AGG | + | chr8.2:63698053-63698072 | MS.gene019391:CDS | 65.0% | |
| CTGCTGCCCCCAGGAAGCCT+CGG | + | chr8.2:63698062-63698081 | MS.gene019391:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 63698010 | 63699874 | 63698010 | ID=MS.gene019391 |
| chr8.2 | mRNA | 63698010 | 63699874 | 63698010 | ID=MS.gene019391.t1;Parent=MS.gene019391 |
| chr8.2 | exon | 63698010 | 63698357 | 63698010 | ID=MS.gene019391.t1.exon1;Parent=MS.gene019391.t1 |
| chr8.2 | CDS | 63698010 | 63698357 | 63698010 | ID=cds.MS.gene019391.t1;Parent=MS.gene019391.t1 |
| chr8.2 | exon | 63699584 | 63699874 | 63699584 | ID=MS.gene019391.t1.exon2;Parent=MS.gene019391.t1 |
| chr8.2 | CDS | 63699584 | 63699874 | 63699584 | ID=cds.MS.gene019391.t1;Parent=MS.gene019391.t1 |
| Gene Sequence |
| Protein sequence |
