Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020461.t1 | KEH35718.1 | 94.3 | 527 | 26 | 1 | 1 | 523 | 1 | 527 | 3.90E-286 | 993.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020461.t1 | Q3E911 | 54.6 | 465 | 204 | 3 | 48 | 508 | 30 | 491 | 7.8e-142 | 505.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020461.t1 | A0A072V2Y1 | 94.3 | 527 | 26 | 1 | 1 | 523 | 1 | 527 | 2.8e-286 | 993.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene20884 | MS.gene020461 | PPI |
| MS.gene020461 | MS.gene008871 | PPI |
| MS.gene020461 | MS.gene07338 | PPI |
| MS.gene020461 | MS.gene067932 | PPI |
| MS.gene020461 | MS.gene068115 | PPI |
| MS.gene39993 | MS.gene020461 | PPI |
| MS.gene32053 | MS.gene020461 | PPI |
| MS.gene068116 | MS.gene020461 | PPI |
| MS.gene005487 | MS.gene020461 | PPI |
| MS.gene004676 | MS.gene020461 | PPI |
| MS.gene020461 | MS.gene008863 | PPI |
| MS.gene008872 | MS.gene020461 | PPI |
| MS.gene020461 | MS.gene056432 | PPI |
| MS.gene036227 | MS.gene020461 | PPI |
| MS.gene020461 | MS.gene067938 | PPI |
| MS.gene020461 | MS.gene068108 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020461.t1 | MTR_3g099753 | 94.118 | 527 | 27 | 1 | 1 | 523 | 1 | 527 | 0.0 | 1013 |
| MS.gene020461.t1 | MTR_3g099753 | 92.925 | 523 | 17 | 1 | 1 | 523 | 1 | 503 | 0.0 | 1000 |
| MS.gene020461.t1 | MTR_1g072300 | 31.337 | 501 | 328 | 8 | 28 | 518 | 2 | 496 | 1.70e-75 | 247 |
| MS.gene020461.t1 | MTR_8g007375 | 28.536 | 403 | 276 | 4 | 119 | 518 | 6 | 399 | 8.01e-63 | 211 |
| MS.gene020461.t1 | MTR_8g059115 | 32.051 | 390 | 261 | 3 | 123 | 511 | 9 | 395 | 2.33e-61 | 207 |
| MS.gene020461.t1 | MTR_2g013450 | 28.041 | 485 | 341 | 4 | 40 | 519 | 7 | 488 | 2.63e-60 | 207 |
| MS.gene020461.t1 | MTR_8g465890 | 29.120 | 443 | 290 | 9 | 75 | 506 | 45 | 474 | 4.03e-59 | 203 |
| MS.gene020461.t1 | MTR_8g069570 | 29.695 | 394 | 272 | 3 | 77 | 468 | 43 | 433 | 1.41e-57 | 199 |
| MS.gene020461.t1 | MTR_1g022400 | 29.353 | 402 | 275 | 5 | 6 | 405 | 8 | 402 | 3.95e-56 | 193 |
| MS.gene020461.t1 | MTR_2g047855 | 28.474 | 439 | 294 | 9 | 39 | 466 | 8 | 437 | 4.25e-56 | 195 |
| MS.gene020461.t1 | MTR_2g090290 | 29.691 | 421 | 283 | 5 | 74 | 486 | 49 | 464 | 4.43e-52 | 184 |
| MS.gene020461.t1 | MTR_1g086820 | 28.846 | 416 | 281 | 7 | 56 | 466 | 30 | 435 | 5.97e-52 | 184 |
| MS.gene020461.t1 | MTR_8g031520 | 31.844 | 179 | 119 | 2 | 76 | 253 | 123 | 299 | 5.50e-29 | 116 |
| MS.gene020461.t1 | MTR_7g089770 | 23.758 | 463 | 324 | 10 | 54 | 508 | 156 | 597 | 6.73e-27 | 115 |
| MS.gene020461.t1 | MTR_1g050750 | 24.318 | 440 | 309 | 11 | 76 | 508 | 109 | 531 | 1.01e-24 | 108 |
| MS.gene020461.t1 | MTR_2g096880 | 20.682 | 469 | 362 | 6 | 57 | 519 | 41 | 505 | 2.36e-20 | 94.7 |
| MS.gene020461.t1 | MTR_8g031510 | 26.590 | 173 | 117 | 3 | 349 | 518 | 1 | 166 | 7.59e-15 | 73.2 |
| MS.gene020461.t1 | MTR_8g054410 | 24.176 | 273 | 202 | 3 | 160 | 431 | 214 | 482 | 5.13e-13 | 72.0 |
| MS.gene020461.t1 | MTR_1g048080 | 23.891 | 293 | 198 | 6 | 65 | 355 | 578 | 847 | 2.55e-12 | 70.1 |
| MS.gene020461.t1 | MTR_7g091410 | 23.373 | 338 | 234 | 11 | 99 | 422 | 55 | 381 | 5.01e-11 | 65.5 |
| MS.gene020461.t1 | MTR_7g091410 | 23.373 | 338 | 234 | 11 | 99 | 422 | 161 | 487 | 5.93e-11 | 65.5 |
| MS.gene020461.t1 | MTR_7g091410 | 23.373 | 338 | 234 | 11 | 99 | 422 | 96 | 422 | 6.04e-11 | 65.5 |
| MS.gene020461.t1 | MTR_6g079920 | 21.930 | 342 | 250 | 9 | 95 | 430 | 231 | 561 | 6.72e-11 | 65.1 |
| MS.gene020461.t1 | MTR_8g039270 | 22.393 | 326 | 241 | 5 | 164 | 487 | 171 | 486 | 7.60e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020461.t1 | AT5G27460 | 54.105 | 475 | 210 | 4 | 39 | 508 | 20 | 491 | 1.49e-178 | 511 |
| MS.gene020461.t1 | AT1G02150 | 34.375 | 384 | 246 | 3 | 76 | 458 | 86 | 464 | 1.04e-79 | 259 |
| MS.gene020461.t1 | AT4G02820 | 30.802 | 474 | 322 | 4 | 46 | 519 | 50 | 517 | 3.49e-77 | 252 |
| MS.gene020461.t1 | AT4G21705 | 28.862 | 492 | 339 | 4 | 29 | 518 | 4 | 486 | 8.50e-69 | 229 |
| MS.gene020461.t1 | AT1G02370 | 28.889 | 450 | 308 | 5 | 76 | 519 | 90 | 533 | 1.49e-65 | 222 |
| MS.gene020461.t1 | AT2G20710 | 30.465 | 430 | 294 | 4 | 34 | 462 | 15 | 440 | 4.19e-64 | 217 |
| MS.gene020461.t1 | AT1G60770 | 31.738 | 397 | 264 | 4 | 126 | 518 | 91 | 484 | 7.93e-61 | 208 |
| MS.gene020461.t1 | AT4G01990 | 27.640 | 445 | 314 | 4 | 76 | 518 | 59 | 497 | 1.08e-56 | 197 |
| MS.gene020461.t1 | AT5G09450 | 31.395 | 344 | 231 | 4 | 55 | 395 | 53 | 394 | 4.48e-56 | 193 |
| MS.gene020461.t1 | AT2G20710 | 30.946 | 349 | 236 | 4 | 115 | 462 | 1 | 345 | 4.09e-48 | 171 |
| MS.gene020461.t1 | AT1G28020 | 30.675 | 326 | 214 | 4 | 74 | 393 | 53 | 372 | 5.69e-43 | 160 |
| MS.gene020461.t1 | AT1G80270 | 23.341 | 437 | 314 | 10 | 76 | 506 | 147 | 568 | 3.27e-28 | 119 |
| MS.gene020461.t1 | AT1G80270 | 23.341 | 437 | 314 | 10 | 76 | 506 | 147 | 568 | 3.27e-28 | 119 |
| MS.gene020461.t1 | AT1G80270 | 23.341 | 437 | 314 | 10 | 76 | 506 | 147 | 568 | 3.27e-28 | 119 |
| MS.gene020461.t1 | AT1G80270 | 23.341 | 437 | 314 | 10 | 76 | 506 | 147 | 568 | 3.27e-28 | 119 |
| MS.gene020461.t1 | AT1G80270 | 23.341 | 437 | 314 | 10 | 76 | 506 | 147 | 568 | 3.27e-28 | 119 |
| MS.gene020461.t1 | AT1G15480 | 21.918 | 438 | 323 | 9 | 76 | 508 | 145 | 568 | 1.59e-24 | 107 |
| MS.gene020461.t1 | AT3G11380 | 27.653 | 311 | 186 | 8 | 92 | 398 | 78 | 353 | 1.66e-20 | 95.1 |
| MS.gene020461.t1 | AT3G11380 | 32.044 | 181 | 114 | 4 | 72 | 243 | 360 | 540 | 6.50e-15 | 77.8 |
| MS.gene020461.t1 | AT3G15590 | 22.685 | 432 | 323 | 6 | 76 | 506 | 160 | 581 | 3.45e-20 | 94.7 |
| MS.gene020461.t1 | AT3G15590 | 22.685 | 432 | 323 | 6 | 76 | 506 | 160 | 581 | 3.45e-20 | 94.7 |
| MS.gene020461.t1 | AT1G28000 | 26.457 | 223 | 157 | 4 | 75 | 293 | 51 | 270 | 1.26e-18 | 88.2 |
| MS.gene020461.t1 | AT1G07590 | 21.711 | 456 | 349 | 6 | 68 | 519 | 76 | 527 | 8.67e-18 | 86.7 |
| MS.gene020461.t1 | AT1G43010 | 28.638 | 213 | 142 | 3 | 74 | 285 | 53 | 256 | 2.16e-17 | 82.4 |
| MS.gene020461.t1 | AT2G31400 | 25.000 | 268 | 197 | 3 | 160 | 426 | 270 | 534 | 1.90e-14 | 77.0 |
| MS.gene020461.t1 | AT2G31400 | 25.000 | 268 | 197 | 3 | 160 | 426 | 270 | 534 | 2.33e-14 | 76.6 |
| MS.gene020461.t1 | AT2G32630 | 24.014 | 279 | 189 | 7 | 158 | 426 | 294 | 559 | 3.94e-12 | 69.3 |
| MS.gene020461.t1 | AT3G06920 | 20.968 | 310 | 229 | 7 | 159 | 464 | 183 | 480 | 8.66e-12 | 68.6 |
| MS.gene020461.t1 | AT3G06920 | 20.968 | 310 | 229 | 7 | 159 | 464 | 183 | 480 | 8.66e-12 | 68.6 |
| MS.gene020461.t1 | AT3G06920 | 20.968 | 310 | 229 | 7 | 159 | 464 | 169 | 466 | 1.05e-11 | 68.2 |
| MS.gene020461.t1 | AT5G02860 | 18.974 | 390 | 265 | 9 | 88 | 433 | 134 | 516 | 9.99e-11 | 65.1 |
| MS.gene020461.t1 | AT5G02860 | 18.974 | 390 | 265 | 9 | 88 | 433 | 134 | 516 | 9.99e-11 | 65.1 |
| MS.gene020461.t1 | AT5G02860 | 18.974 | 390 | 265 | 9 | 88 | 433 | 134 | 516 | 9.99e-11 | 65.1 |
| MS.gene020461.t1 | AT5G02860 | 18.974 | 390 | 265 | 9 | 88 | 433 | 134 | 516 | 9.99e-11 | 65.1 |
| MS.gene020461.t1 | AT5G02860 | 18.974 | 390 | 265 | 9 | 88 | 433 | 134 | 516 | 9.99e-11 | 65.1 |
Find 110 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGACTGTTTCCATTCTTAA+AGG | 0.176026 | 3.3:+82318156 | MS.gene020461:CDS |
| ATTAGCCATAGCTGAATATT+TGG | 0.185459 | 3.3:+82317963 | MS.gene020461:CDS |
| CATTGCCAGTGCTTCAAAAT+TGG | 0.193795 | 3.3:+82316192 | MS.gene020461:CDS |
| AGTTTCATCATTTCATTATA+AGG | 0.208074 | 3.3:-82317202 | None:intergenic |
| TCTTCCACCAACTGCCTTAC+TGG | 0.224446 | 3.3:-82317596 | None:intergenic |
| CCATTCTCTGAAGATTCTTC+TGG | 0.238798 | 3.3:-82317683 | None:intergenic |
| CATGAACGTCTCAGCTTTAC+TGG | 0.276241 | 3.3:-82317140 | None:intergenic |
| ATCACAGATATTCATAATTT+AGG | 0.309949 | 3.3:+82318021 | MS.gene020461:CDS |
| ATTTCCCACGTCTTGTAGTT+TGG | 0.313223 | 3.3:-82317829 | None:intergenic |
| TTTGGATTTGATGAGCCTTC+TGG | 0.315146 | 3.3:-82316261 | None:intergenic |
| AATGATCAATAAAGACAAAA+TGG | 0.322417 | 3.3:+82318122 | MS.gene020461:CDS |
| CTGCGAAGAGAAGAAGTATA+TGG | 0.336111 | 3.3:-82316044 | None:intergenic |
| GTTTCATCATTTCATTATAA+GGG | 0.337687 | 3.3:-82317201 | None:intergenic |
| GATATTCATAATTTAGGTCT+TGG | 0.351730 | 3.3:+82318027 | MS.gene020461:CDS |
| TGTGATGAGGGAGAGCGATA+TGG | 0.373547 | 3.3:+82317331 | MS.gene020461:CDS |
| GGCAATGGAGTTTGCGTTGA+AGG | 0.373565 | 3.3:-82316176 | None:intergenic |
| AAATGATGAGAATGTTGAAA+TGG | 0.383490 | 3.3:+82317390 | MS.gene020461:CDS |
| CCCAGTGAAGCCTTTAAGAA+TGG | 0.389532 | 3.3:-82318166 | None:intergenic |
| ATGTTCTGTCTTACAACCTT+TGG | 0.391181 | 3.3:+82317299 | MS.gene020461:CDS |
| CATGGAGAAGCTCTATGAAC+TGG | 0.396411 | 3.3:+82317159 | MS.gene020461:CDS |
| TATTGCCATGAAAAGAGCTT+TGG | 0.402179 | 3.3:+82317897 | MS.gene020461:CDS |
| AACTTCAGAGCATGATCAGC+TGG | 0.404901 | 3.3:-82316992 | None:intergenic |
| TCCATTCTTAAAGGCTTCAC+TGG | 0.406952 | 3.3:+82318165 | MS.gene020461:CDS |
| TAACAAGCTTGGTGAAGCTT+GGG | 0.412299 | 3.3:+82317647 | MS.gene020461:CDS |
| CTTAAAGGCTTCACTGGGTA+AGG | 0.413189 | 3.3:+82318171 | MS.gene020461:CDS |
| AGGAGGGAGTCTTGCGGCTG+TGG | 0.422261 | 3.3:+82317569 | MS.gene020461:CDS |
| GCTTTCTTTCCAGCTGAGTC+AGG | 0.427827 | 3.3:-82317073 | None:intergenic |
| CAGTAAAGCTGAGACGTTCA+TGG | 0.430914 | 3.3:+82317141 | MS.gene020461:CDS |
| TCATTGAAGGATATGTCAAT+TGG | 0.432642 | 3.3:+82317854 | MS.gene020461:CDS |
| TTTGCACACAGGTATTCAAC+TGG | 0.435844 | 3.3:+82316939 | MS.gene020461:intron |
| GAATGCGTGATTGTAGCGTT+TGG | 0.439592 | 3.3:-82316279 | None:intergenic |
| TGTTAGTATGCAAATATAGT+TGG | 0.439822 | 3.3:-82317629 | None:intergenic |
| CCAGAAGAATCTTCAGAGAA+TGG | 0.455350 | 3.3:+82317683 | MS.gene020461:CDS |
| GTGATGAGGGAGAGCGATAT+GGG | 0.460171 | 3.3:+82317332 | MS.gene020461:CDS |
| ACATGTAGACAGTTTCTCTT+CGG | 0.461851 | 3.3:-82317494 | None:intergenic |
| AATGATGAGAATGTTGAAAT+GGG | 0.468069 | 3.3:+82317391 | MS.gene020461:CDS |
| AGCTGATCATGCTCTGAAGT+TGG | 0.470813 | 3.3:+82316994 | MS.gene020461:CDS |
| GCCACGTAGAAGTGGGAGAT+AGG | 0.471094 | 3.3:-82317098 | None:intergenic |
| CTAACAAGCTTGGTGAAGCT+TGG | 0.471247 | 3.3:+82317646 | MS.gene020461:CDS |
| CAGAAGAATCTTCAGAGAAT+GGG | 0.472581 | 3.3:+82317684 | MS.gene020461:CDS |
| CTGAATATTTGGAGAAATGT+GGG | 0.476542 | 3.3:+82317974 | MS.gene020461:CDS |
| GGATAACTAGGGGTACCTTT+CGG | 0.478712 | 3.3:-82317246 | None:intergenic |
| GCGGCTGTGGGAAGCCAGTA+AGG | 0.479826 | 3.3:+82317582 | MS.gene020461:CDS |
| TGCGAAGAGAAGAAGTATAT+GGG | 0.480978 | 3.3:-82316043 | None:intergenic |
| GTATCACGGCGGTGAGAGAT+TGG | 0.481133 | 3.3:-82315983 | None:intergenic |
| GTTGTAAGACAGAACATTCA+AGG | 0.484662 | 3.3:-82317293 | None:intergenic |
| CTTCAAAATTGGATCGATCA+AGG | 0.488611 | 3.3:+82316203 | MS.gene020461:CDS |
| CTATGTTGAAAGACTGCCAT+TGG | 0.497964 | 3.3:+82317920 | MS.gene020461:CDS |
| CCACTTCTACGTGGCTATGT+AGG | 0.500824 | 3.3:+82317106 | MS.gene020461:CDS |
| ATACGCCTCTTTGAAGCAAA+AGG | 0.504517 | 3.3:+82317549 | MS.gene020461:CDS |
| ATATGTCAATTGGCAAAAGA+TGG | 0.504962 | 3.3:+82317864 | MS.gene020461:CDS |
| ACGTGGGAAATTCTCATTGA+AGG | 0.506864 | 3.3:+82317841 | MS.gene020461:CDS |
| TTCTTTGTGGCGGCCTCCAA+TGG | 0.509216 | 3.3:-82317936 | None:intergenic |
| GCCAATGTGTATATGAAAGC+AGG | 0.509662 | 3.3:+82317436 | MS.gene020461:CDS |
| ATGGCTAATACAATTCTTTG+TGG | 0.512455 | 3.3:-82317949 | None:intergenic |
| TTTCTCCAAATATTCAGCTA+TGG | 0.517860 | 3.3:-82317968 | None:intergenic |
| ATGCGTATACCTGACTCAGC+TGG | 0.523390 | 3.3:+82317064 | MS.gene020461:CDS |
| CCATTCTTAAAGGCTTCACT+GGG | 0.526110 | 3.3:+82318166 | MS.gene020461:CDS |
| GCGATATGGGGTTGCAGCAG+TGG | 0.527736 | 3.3:+82317345 | MS.gene020461:CDS |
| GCTGAATATTTGGAGAAATG+TGG | 0.530476 | 3.3:+82317973 | MS.gene020461:CDS |
| CACACAGGTATTCAACTGGA+TGG | 0.535536 | 3.3:+82316943 | MS.gene020461:intron |
| TGGATGAGTGCTTGTGATGA+GGG | 0.538983 | 3.3:+82317319 | MS.gene020461:CDS |
| ACGCTACAATCACGCATTCG+AGG | 0.542785 | 3.3:+82316283 | MS.gene020461:CDS |
| TACGTGGCTATGTAGGAGAT+AGG | 0.544359 | 3.3:+82317113 | MS.gene020461:CDS |
| CTCTCACCGCCGTGATACGA+CGG | 0.545445 | 3.3:+82315988 | MS.gene020461:CDS |
| CAATAAAGACAAAATGGAGA+TGG | 0.549030 | 3.3:+82318128 | MS.gene020461:CDS |
| AGGTAACAAGCTTTCATCAT+CGG | 0.555005 | 3.3:+82316223 | MS.gene020461:CDS |
| TGTTGAAAGACTGCCATTGG+AGG | 0.555843 | 3.3:+82317923 | MS.gene020461:CDS |
| TATTTGCATACTAACAAGCT+TGG | 0.557592 | 3.3:+82317636 | MS.gene020461:CDS |
| ATGAGAATGTTGAAATGGGA+TGG | 0.563565 | 3.3:+82317395 | MS.gene020461:CDS |
| TCCTGCTTTCATATACACAT+TGG | 0.565526 | 3.3:-82317437 | None:intergenic |
| TTAGGAGCATATGTGCGGAA+TGG | 0.567056 | 3.3:+82317751 | MS.gene020461:CDS |
| GCATCTCCACACATTGCAGA+AGG | 0.568052 | 3.3:+82317798 | MS.gene020461:CDS |
| ATGGAGAAGCTCTATGAACT+GGG | 0.568445 | 3.3:+82317160 | MS.gene020461:CDS |
| CTGTCTACATGTAATCGTCT+TGG | 0.569357 | 3.3:+82317505 | MS.gene020461:CDS |
| CATGATCAGCTGGGTTTATG+CGG | 0.572059 | 3.3:-82316982 | None:intergenic |
| CGTGTCGTACCGTCGTATCA+CGG | 0.574617 | 3.3:-82315997 | None:intergenic |
| GAAGCCAGTAAGGCAGTTGG+TGG | 0.575582 | 3.3:+82317592 | MS.gene020461:CDS |
| GCTCTATGAACTGGGGCTAG+TGG | 0.575872 | 3.3:+82317168 | MS.gene020461:CDS |
| CGCCTCTTTGAAGCAAAAGG+AGG | 0.583122 | 3.3:+82317552 | MS.gene020461:CDS |
| TTGGATGAGTGCTTGTGATG+AGG | 0.583463 | 3.3:+82317318 | MS.gene020461:CDS |
| CCTACATAGCCACGTAGAAG+TGG | 0.584375 | 3.3:-82317106 | None:intergenic |
| ACTTCAGAGCATGATCAGCT+GGG | 0.585003 | 3.3:-82316991 | None:intergenic |
| AACTGAGATGCATCTCCAGA+AGG | 0.596914 | 3.3:+82316246 | MS.gene020461:CDS |
| ACGTGGCTATGTAGGAGATA+GGG | 0.597576 | 3.3:+82317114 | MS.gene020461:CDS |
| GGAGGGAGTCTTGCGGCTGT+GGG | 0.599301 | 3.3:+82317570 | MS.gene020461:CDS |
| CATCACAAGCACTCATCCAA+AGG | 0.605501 | 3.3:-82317315 | None:intergenic |
| TTTATTTGTTGGATAACTAG+GGG | 0.607266 | 3.3:-82317256 | None:intergenic |
| GCTAATACAATTCTTTGTGG+CGG | 0.610024 | 3.3:-82317946 | None:intergenic |
| AGCCACCCTTCTGCAATGTG+TGG | 0.612657 | 3.3:-82317804 | None:intergenic |
| GCCTCTTTGAAGCAAAAGGA+GGG | 0.615558 | 3.3:+82317553 | MS.gene020461:CDS |
| AACAAGCTTGGTGAAGCTTG+GGG | 0.626479 | 3.3:+82317648 | MS.gene020461:CDS |
| TGGGAAGCCAGTAAGGCAGT+TGG | 0.629575 | 3.3:+82317589 | MS.gene020461:CDS |
| CATCTCCACACATTGCAGAA+GGG | 0.629974 | 3.3:+82317799 | MS.gene020461:CDS |
| CTCCACACATTGCAGAAGGG+TGG | 0.631048 | 3.3:+82317802 | MS.gene020461:CDS |
| TTGTAAGACAGAACATTCAA+GGG | 0.631305 | 3.3:-82317292 | None:intergenic |
| CTACATAGCCACGTAGAAGT+GGG | 0.632992 | 3.3:-82317105 | None:intergenic |
| GCTGTCCAAACTACAAGACG+TGG | 0.636885 | 3.3:+82317824 | MS.gene020461:CDS |
| TACCTTTCGGTACTCACATG+TGG | 0.641449 | 3.3:-82317233 | None:intergenic |
| CAATTGGCAAAAGATGGATG+AGG | 0.660417 | 3.3:+82317870 | MS.gene020461:CDS |
| ACGTAGAAGTGGGAGATAGG+CGG | 0.666086 | 3.3:-82317095 | None:intergenic |
| AAGGTGGTTCTTGAGCAGAA+AGG | 0.666643 | 3.3:-82318086 | None:intergenic |
| GCGAAGAGAAGAAGTATATG+GGG | 0.666763 | 3.3:-82316042 | None:intergenic |
| AGCAAAAGGAGGGAGTCTTG+CGG | 0.669308 | 3.3:+82317563 | MS.gene020461:CDS |
| TGCCACATGTGAGTACCGAA+AGG | 0.679332 | 3.3:+82317231 | MS.gene020461:CDS |
| GCCTATCTCCCACTTCTACG+TGG | 0.702332 | 3.3:+82317097 | MS.gene020461:CDS |
| TGGAGAAGCTCTATGAACTG+GGG | 0.707353 | 3.3:+82317161 | MS.gene020461:CDS |
| CTGTCCAAACTACAAGACGT+GGG | 0.720216 | 3.3:+82317825 | MS.gene020461:CDS |
| TGATGAGGGAGAGCGATATG+GGG | 0.743042 | 3.3:+82317333 | MS.gene020461:CDS |
| GTCGTACCGTCGTATCACGG+CGG | 0.782153 | 3.3:-82315994 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGATCAATAAAGACAAAA+TGG | + | chr3.3:82318122-82318141 | MS.gene020461:CDS | 20.0% |
| !! | AGTTTCATCATTTCATTATA+AGG | - | chr3.3:82317205-82317224 | None:intergenic | 20.0% |
| !! | ATCACAGATATTCATAATTT+AGG | + | chr3.3:82318021-82318040 | MS.gene020461:CDS | 20.0% |
| !! | GTTTCATCATTTCATTATAA+GGG | - | chr3.3:82317204-82317223 | None:intergenic | 20.0% |
| !!! | CTTTATTTCGTTTTATTTGT+TGG | - | chr3.3:82317270-82317289 | None:intergenic | 20.0% |
| !!! | TGATGATGTACTTTTTATTT+TGG | + | chr3.3:82316629-82316648 | MS.gene020461:intron | 20.0% |
| !!! | TGTCTTTATTGATCATTTTA+AGG | - | chr3.3:82318119-82318138 | None:intergenic | 20.0% |
| !!! | TTTTATTTGTTGGATAACTA+GGG | - | chr3.3:82317260-82317279 | None:intergenic | 20.0% |
| ! | AAATGATGAGAATGTTGAAA+TGG | + | chr3.3:82317390-82317409 | MS.gene020461:CDS | 25.0% |
| ! | AATGATGAGAATGTTGAAAT+GGG | + | chr3.3:82317391-82317410 | MS.gene020461:CDS | 25.0% |
| ! | AGTAGTAAATGAAAATGACA+AGG | + | chr3.3:82316454-82316473 | MS.gene020461:intron | 25.0% |
| ! | GATATTCATAATTTAGGTCT+TGG | + | chr3.3:82318027-82318046 | MS.gene020461:CDS | 25.0% |
| ! | GTAGTAAATGAAAATGACAA+GGG | + | chr3.3:82316455-82316474 | MS.gene020461:intron | 25.0% |
| ! | GTTATTGCAATGTGATTTAT+GGG | + | chr3.3:82316861-82316880 | MS.gene020461:intron | 25.0% |
| ! | TGTTAGTATGCAAATATAGT+TGG | - | chr3.3:82317632-82317651 | None:intergenic | 25.0% |
| ! | TGTTATTGCAATGTGATTTA+TGG | + | chr3.3:82316860-82316879 | MS.gene020461:intron | 25.0% |
| !! | TTAATTATTCTTTTGCACAC+AGG | + | chr3.3:82316928-82316947 | MS.gene020461:intron | 25.0% |
| !! | TTTATTTGTTGGATAACTAG+GGG | - | chr3.3:82317259-82317278 | None:intergenic | 25.0% |
| !!! | AGTTCTAAAGTAGTTAATTG+TGG | + | chr3.3:82316357-82316376 | MS.gene020461:intron | 25.0% |
| !!! | ATTTAGTTTGTTGCTTATGT+TGG | + | chr3.3:82316559-82316578 | MS.gene020461:intron | 25.0% |
| !!! | GTTTTATTTGTTGGATAACT+AGG | - | chr3.3:82317261-82317280 | None:intergenic | 25.0% |
| !!! | TATTGATCATTTTAAGGACA+TGG | - | chr3.3:82318113-82318132 | None:intergenic | 25.0% |
| !!! | TGATGTACTTTTTATTTTGG+AGG | + | chr3.3:82316632-82316651 | MS.gene020461:intron | 25.0% |
| !!! | TGTTTAGCTTATGCTTTTAT+AGG | + | chr3.3:82316587-82316606 | MS.gene020461:intron | 25.0% |
| AAGATACTGTAACTGATCAT+CGG | + | chr3.3:82316815-82316834 | MS.gene020461:intron | 30.0% | |
| AAGCTGTAATCAATCCATAA+TGG | - | chr3.3:82316790-82316809 | None:intergenic | 30.0% | |
| ACAGAAATTCAACAGAGAAA+TGG | - | chr3.3:82316494-82316513 | None:intergenic | 30.0% | |
| AGTTAATCGCTAAAAACTGT+GGG | + | chr3.3:82317017-82317036 | MS.gene020461:CDS | 30.0% | |
| ATATGTCAATTGGCAAAAGA+TGG | + | chr3.3:82317864-82317883 | MS.gene020461:CDS | 30.0% | |
| ATGGCTAATACAATTCTTTG+TGG | - | chr3.3:82317952-82317971 | None:intergenic | 30.0% | |
| ATTAGCCATAGCTGAATATT+TGG | + | chr3.3:82317963-82317982 | MS.gene020461:CDS | 30.0% | |
| ATTTCCAAAAAACCTTCAAG+CGG | - | chr3.3:82316529-82316548 | None:intergenic | 30.0% | |
| CAATAAAGACAAAATGGAGA+TGG | + | chr3.3:82318128-82318147 | MS.gene020461:CDS | 30.0% | |
| CTGAATATTTGGAGAAATGT+GGG | + | chr3.3:82317974-82317993 | MS.gene020461:CDS | 30.0% | |
| GCTATAGTGAAGTGATTATA+AGG | - | chr3.3:82316736-82316755 | None:intergenic | 30.0% | |
| TATTTGCATACTAACAAGCT+TGG | + | chr3.3:82317636-82317655 | MS.gene020461:CDS | 30.0% | |
| TCATTGAAGGATATGTCAAT+TGG | + | chr3.3:82317854-82317873 | MS.gene020461:CDS | 30.0% | |
| TTGTAAGACAGAACATTCAA+GGG | - | chr3.3:82317295-82317314 | None:intergenic | 30.0% | |
| TTTCTCCAAATATTCAGCTA+TGG | - | chr3.3:82317971-82317990 | None:intergenic | 30.0% | |
| ! | AGAGTCTCTAATGTTCTTTT+AGG | + | chr3.3:82317733-82317752 | MS.gene020461:CDS | 30.0% |
| !! | ATCATTTTAAGGACATGGAA+AGG | - | chr3.3:82318108-82318127 | None:intergenic | 30.0% |
| !! | ATTACTAGCTTTAGCCATAT+AGG | + | chr3.3:82316383-82316402 | MS.gene020461:intron | 30.0% |
| !! | TTACTAGCTTTAGCCATATA+GGG | + | chr3.3:82316384-82316403 | MS.gene020461:intron | 30.0% |
| !!! | GGCATTTTTTAGAACTAGAA+TGG | - | chr3.3:82317476-82317495 | None:intergenic | 30.0% |
| ACATGTAGACAGTTTCTCTT+CGG | - | chr3.3:82317497-82317516 | None:intergenic | 35.0% | |
| AGGTAACAAGCTTTCATCAT+CGG | + | chr3.3:82316223-82316242 | MS.gene020461:CDS | 35.0% | |
| ATGAGAATGTTGAAATGGGA+TGG | + | chr3.3:82317395-82317414 | MS.gene020461:CDS | 35.0% | |
| ATGTTCTGTCTTACAACCTT+TGG | + | chr3.3:82317299-82317318 | MS.gene020461:CDS | 35.0% | |
| CAGAAGAATCTTCAGAGAAT+GGG | + | chr3.3:82317684-82317703 | MS.gene020461:CDS | 35.0% | |
| CATAAACCCTAAACCCTATA+TGG | - | chr3.3:82316400-82316419 | None:intergenic | 35.0% | |
| CTTCAAAATTGGATCGATCA+AGG | + | chr3.3:82316203-82316222 | MS.gene020461:CDS | 35.0% | |
| CTTTAGCCATATAGGGTTTA+GGG | + | chr3.3:82316391-82316410 | MS.gene020461:intron | 35.0% | |
| GAGACTGTTTCCATTCTTAA+AGG | + | chr3.3:82318156-82318175 | MS.gene020461:CDS | 35.0% | |
| GAGTTAATCGCTAAAAACTG+TGG | + | chr3.3:82317016-82317035 | MS.gene020461:CDS | 35.0% | |
| GCTAATACAATTCTTTGTGG+CGG | - | chr3.3:82317949-82317968 | None:intergenic | 35.0% | |
| GCTGAATATTTGGAGAAATG+TGG | + | chr3.3:82317973-82317992 | MS.gene020461:CDS | 35.0% | |
| GTTGTAAGACAGAACATTCA+AGG | - | chr3.3:82317296-82317315 | None:intergenic | 35.0% | |
| TATTGCCATGAAAAGAGCTT+TGG | + | chr3.3:82317897-82317916 | MS.gene020461:CDS | 35.0% | |
| TCCTGCTTTCATATACACAT+TGG | - | chr3.3:82317440-82317459 | None:intergenic | 35.0% | |
| TTACATTCCTGCAATTTGTG+TGG | + | chr3.3:82316329-82316348 | MS.gene020461:intron | 35.0% | |
| TTTCCAAAAAACCTTCAAGC+GGG | - | chr3.3:82316528-82316547 | None:intergenic | 35.0% | |
| ! | AGCAGCATCAGTTTCTTTTT+GGG | + | chr3.3:82316065-82316084 | MS.gene020461:CDS | 35.0% |
| ! | CACTTCACTATAGCATTTTG+TGG | + | chr3.3:82316742-82316761 | MS.gene020461:intron | 35.0% |
| ! | GGTTTATGCGGAATTTTTGT+TGG | - | chr3.3:82316973-82316992 | None:intergenic | 35.0% |
| ! | TGCGAAGAGAAGAAGTATAT+GGG | - | chr3.3:82316046-82316065 | None:intergenic | 35.0% |
| !! | ATTTTAAGGACATGGAAAGG+TGG | - | chr3.3:82318105-82318124 | None:intergenic | 35.0% |
| !! | TTCTTTTAGGAGCATATGTG+CGG | + | chr3.3:82317746-82317765 | MS.gene020461:CDS | 35.0% |
| !! | TTTTGTGGATTAATCGCTTC+AGG | + | chr3.3:82316757-82316776 | MS.gene020461:intron | 35.0% |
| AAAAACCTTCAAGCGGGAAA+AGG | - | chr3.3:82316522-82316541 | None:intergenic | 40.0% | |
| ACGTGGGAAATTCTCATTGA+AGG | + | chr3.3:82317841-82317860 | MS.gene020461:CDS | 40.0% | |
| ATGGAGAAGCTCTATGAACT+GGG | + | chr3.3:82317160-82317179 | MS.gene020461:CDS | 40.0% | |
| ATTTCCCACGTCTTGTAGTT+TGG | - | chr3.3:82317832-82317851 | None:intergenic | 40.0% | |
| CAATTGGCAAAAGATGGATG+AGG | + | chr3.3:82317870-82317889 | MS.gene020461:CDS | 40.0% | |
| CATTGCCAGTGCTTCAAAAT+TGG | + | chr3.3:82316192-82316211 | MS.gene020461:CDS | 40.0% | |
| CCAGAAGAATCTTCAGAGAA+TGG | + | chr3.3:82317683-82317702 | MS.gene020461:CDS | 40.0% | |
| CCATTCTTAAAGGCTTCACT+GGG | + | chr3.3:82318166-82318185 | MS.gene020461:CDS | 40.0% | |
| CTATGTTGAAAGACTGCCAT+TGG | + | chr3.3:82317920-82317939 | MS.gene020461:CDS | 40.0% | |
| CTGTCTACATGTAATCGTCT+TGG | + | chr3.3:82317505-82317524 | MS.gene020461:CDS | 40.0% | |
| GCCAATGTGTATATGAAAGC+AGG | + | chr3.3:82317436-82317455 | MS.gene020461:CDS | 40.0% | |
| GCTCAATACGCTGAACTTAA+AGG | - | chr3.3:82316685-82316704 | None:intergenic | 40.0% | |
| GCTTTAGCCATATAGGGTTT+AGG | + | chr3.3:82316390-82316409 | MS.gene020461:intron | 40.0% | |
| TCCATTCTTAAAGGCTTCAC+TGG | + | chr3.3:82318165-82318184 | MS.gene020461:CDS | 40.0% | |
| TTTGCACACAGGTATTCAAC+TGG | + | chr3.3:82316939-82316958 | MS.gene020461:intron | 40.0% | |
| TTTGGATTTGATGAGCCTTC+TGG | - | chr3.3:82316264-82316283 | None:intergenic | 40.0% | |
| ! | ATTTTCCTTTTCCCGCTTGA+AGG | + | chr3.3:82316514-82316533 | MS.gene020461:intron | 40.0% |
| ! | CAGCAGCATCAGTTTCTTTT+TGG | + | chr3.3:82316064-82316083 | MS.gene020461:CDS | 40.0% |
| ! | CATAGCCAAAGCTCTTTTCA+TGG | - | chr3.3:82317905-82317924 | None:intergenic | 40.0% |
| ! | CCATTCTCTGAAGATTCTTC+TGG | - | chr3.3:82317686-82317705 | None:intergenic | 40.0% |
| ! | CTGCGAAGAGAAGAAGTATA+TGG | - | chr3.3:82316047-82316066 | None:intergenic | 40.0% |
| ! | CTTCAGGCTACTTTCCATTA+TGG | + | chr3.3:82316773-82316792 | MS.gene020461:intron | 40.0% |
| ! | GCGAAGAGAAGAAGTATATG+GGG | - | chr3.3:82316045-82316064 | None:intergenic | 40.0% |
| ! | TAACAAGCTTGGTGAAGCTT+GGG | + | chr3.3:82317647-82317666 | MS.gene020461:CDS | 40.0% |
| !! | ATACGCCTCTTTGAAGCAAA+AGG | + | chr3.3:82317549-82317568 | MS.gene020461:CDS | 40.0% |
| !!! | CAATTTTGAAGCACTGGCAA+TGG | - | chr3.3:82316194-82316213 | None:intergenic | 40.0% |
| !!! | TCGATCCAATTTTGAAGCAC+TGG | - | chr3.3:82316200-82316219 | None:intergenic | 40.0% |
| !!! | TTTCCCGCTTGAAGGTTTTT+TGG | + | chr3.3:82316522-82316541 | MS.gene020461:intron | 40.0% |
| AACTGAGATGCATCTCCAGA+AGG | + | chr3.3:82316246-82316265 | MS.gene020461:CDS | 45.0% | |
| AACTTCAGAGCATGATCAGC+TGG | - | chr3.3:82316995-82317014 | None:intergenic | 45.0% | |
| AAGGTGGTTCTTGAGCAGAA+AGG | - | chr3.3:82318089-82318108 | None:intergenic | 45.0% | |
| ACAATCACGCATTCGAGGTT+CGG | + | chr3.3:82316288-82316307 | MS.gene020461:intron | 45.0% | |
| ACGTGGCTATGTAGGAGATA+GGG | + | chr3.3:82317114-82317133 | MS.gene020461:CDS | 45.0% | |
| ACTTCAGAGCATGATCAGCT+GGG | - | chr3.3:82316994-82317013 | None:intergenic | 45.0% | |
| CACACAGGTATTCAACTGGA+TGG | + | chr3.3:82316943-82316962 | MS.gene020461:intron | 45.0% | |
| CAGTAAAGCTGAGACGTTCA+TGG | + | chr3.3:82317141-82317160 | MS.gene020461:CDS | 45.0% | |
| CATCACAAGCACTCATCCAA+AGG | - | chr3.3:82317318-82317337 | None:intergenic | 45.0% | |
| CATCTCCACACATTGCAGAA+GGG | + | chr3.3:82317799-82317818 | MS.gene020461:CDS | 45.0% | |
| CATGAACGTCTCAGCTTTAC+TGG | - | chr3.3:82317143-82317162 | None:intergenic | 45.0% | |
| CATGATCAGCTGGGTTTATG+CGG | - | chr3.3:82316985-82317004 | None:intergenic | 45.0% | |
| CATGGAGAAGCTCTATGAAC+TGG | + | chr3.3:82317159-82317178 | MS.gene020461:CDS | 45.0% | |
| CTACATAGCCACGTAGAAGT+GGG | - | chr3.3:82317108-82317127 | None:intergenic | 45.0% | |
| CTGTCCAAACTACAAGACGT+GGG | + | chr3.3:82317825-82317844 | MS.gene020461:CDS | 45.0% | |
| CTTCGAACCACACAAATTGC+AGG | - | chr3.3:82316339-82316358 | None:intergenic | 45.0% | |
| GAATGCGTGATTGTAGCGTT+TGG | - | chr3.3:82316282-82316301 | None:intergenic | 45.0% | |
| TACCTTTCGGTACTCACATG+TGG | - | chr3.3:82317236-82317255 | None:intergenic | 45.0% | |
| TACGTGGCTATGTAGGAGAT+AGG | + | chr3.3:82317113-82317132 | MS.gene020461:CDS | 45.0% | |
| TGGAGAAGCTCTATGAACTG+GGG | + | chr3.3:82317161-82317180 | MS.gene020461:CDS | 45.0% | |
| TGGATGAGTGCTTGTGATGA+GGG | + | chr3.3:82317319-82317338 | MS.gene020461:CDS | 45.0% | |
| TGTTGAAAGACTGCCATTGG+AGG | + | chr3.3:82317923-82317942 | MS.gene020461:CDS | 45.0% | |
| TTGGATGAGTGCTTGTGATG+AGG | + | chr3.3:82317318-82317337 | MS.gene020461:CDS | 45.0% | |
| ! | AACAAGCTTGGTGAAGCTTG+GGG | + | chr3.3:82317648-82317667 | MS.gene020461:CDS | 45.0% |
| ! | CCCAGTGAAGCCTTTAAGAA+TGG | - | chr3.3:82318169-82318188 | None:intergenic | 45.0% |
| ! | CGCTAAAAACTGTGGGCTAA+TGG | + | chr3.3:82317024-82317043 | MS.gene020461:CDS | 45.0% |
| ! | CTAACAAGCTTGGTGAAGCT+TGG | + | chr3.3:82317646-82317665 | MS.gene020461:CDS | 45.0% |
| ! | TCCCTCCTTTTGCTTCAAAG+AGG | - | chr3.3:82317557-82317576 | None:intergenic | 45.0% |
| ! | TTAGGAGCATATGTGCGGAA+TGG | + | chr3.3:82317751-82317770 | MS.gene020461:CDS | 45.0% |
| !! | AGCTGATCATGCTCTGAAGT+TGG | + | chr3.3:82316994-82317013 | MS.gene020461:CDS | 45.0% |
| !! | GCCTCTTTGAAGCAAAAGGA+GGG | + | chr3.3:82317553-82317572 | MS.gene020461:CDS | 45.0% |
| !! | GGATAACTAGGGGTACCTTT+CGG | - | chr3.3:82317249-82317268 | None:intergenic | 45.0% |
| ACGCTACAATCACGCATTCG+AGG | + | chr3.3:82316283-82316302 | MS.gene020461:CDS | 50.0% | |
| ACGTAGAAGTGGGAGATAGG+CGG | - | chr3.3:82317098-82317117 | None:intergenic | 50.0% | |
| AGCAAAAGGAGGGAGTCTTG+CGG | + | chr3.3:82317563-82317582 | MS.gene020461:CDS | 50.0% | |
| ATGCGTATACCTGACTCAGC+TGG | + | chr3.3:82317064-82317083 | MS.gene020461:CDS | 50.0% | |
| CCACTTCTACGTGGCTATGT+AGG | + | chr3.3:82317106-82317125 | MS.gene020461:CDS | 50.0% | |
| CCTACATAGCCACGTAGAAG+TGG | - | chr3.3:82317109-82317128 | None:intergenic | 50.0% | |
| GCATCTCCACACATTGCAGA+AGG | + | chr3.3:82317798-82317817 | MS.gene020461:CDS | 50.0% | |
| GCTGTCCAAACTACAAGACG+TGG | + | chr3.3:82317824-82317843 | MS.gene020461:CDS | 50.0% | |
| GCTTTCTTTCCAGCTGAGTC+AGG | - | chr3.3:82317076-82317095 | None:intergenic | 50.0% | |
| GGCAATGGAGTTTGCGTTGA+AGG | - | chr3.3:82316179-82316198 | None:intergenic | 50.0% | |
| GTGATGAGGGAGAGCGATAT+GGG | + | chr3.3:82317332-82317351 | MS.gene020461:CDS | 50.0% | |
| TCTTCCACCAACTGCCTTAC+TGG | - | chr3.3:82317599-82317618 | None:intergenic | 50.0% | |
| TGATGAGGGAGAGCGATATG+GGG | + | chr3.3:82317333-82317352 | MS.gene020461:CDS | 50.0% | |
| TGTGATGAGGGAGAGCGATA+TGG | + | chr3.3:82317331-82317350 | MS.gene020461:CDS | 50.0% | |
| !! | CGCCTCTTTGAAGCAAAAGG+AGG | + | chr3.3:82317552-82317571 | MS.gene020461:CDS | 50.0% |
| !! | TGCCACATGTGAGTACCGAA+AGG | + | chr3.3:82317231-82317250 | MS.gene020461:CDS | 50.0% |
| AGCCACCCTTCTGCAATGTG+TGG | - | chr3.3:82317807-82317826 | None:intergenic | 55.0% | |
| CGTGTCGTACCGTCGTATCA+CGG | - | chr3.3:82316000-82316019 | None:intergenic | 55.0% | |
| CTCCACACATTGCAGAAGGG+TGG | + | chr3.3:82317802-82317821 | MS.gene020461:CDS | 55.0% | |
| GAAGCCAGTAAGGCAGTTGG+TGG | + | chr3.3:82317592-82317611 | MS.gene020461:CDS | 55.0% | |
| GCCACGTAGAAGTGGGAGAT+AGG | - | chr3.3:82317101-82317120 | None:intergenic | 55.0% | |
| GCCTATCTCCCACTTCTACG+TGG | + | chr3.3:82317097-82317116 | MS.gene020461:CDS | 55.0% | |
| GCTCTATGAACTGGGGCTAG+TGG | + | chr3.3:82317168-82317187 | MS.gene020461:CDS | 55.0% | |
| GTATCACGGCGGTGAGAGAT+TGG | - | chr3.3:82315986-82316005 | None:intergenic | 55.0% | |
| TGGGAAGCCAGTAAGGCAGT+TGG | + | chr3.3:82317589-82317608 | MS.gene020461:CDS | 55.0% | |
| TTCTTTGTGGCGGCCTCCAA+TGG | - | chr3.3:82317939-82317958 | None:intergenic | 55.0% | |
| CTCTCACCGCCGTGATACGA+CGG | + | chr3.3:82315988-82316007 | MS.gene020461:CDS | 60.0% | |
| GCGATATGGGGTTGCAGCAG+TGG | + | chr3.3:82317345-82317364 | MS.gene020461:CDS | 60.0% | |
| GTCGTACCGTCGTATCACGG+CGG | - | chr3.3:82315997-82316016 | None:intergenic | 60.0% | |
| AGGAGGGAGTCTTGCGGCTG+TGG | + | chr3.3:82317569-82317588 | MS.gene020461:CDS | 65.0% | |
| GCGGCTGTGGGAAGCCAGTA+AGG | + | chr3.3:82317582-82317601 | MS.gene020461:CDS | 65.0% | |
| GGAGGGAGTCTTGCGGCTGT+GGG | + | chr3.3:82317570-82317589 | MS.gene020461:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 82315975 | 82318191 | 82315975 | ID=MS.gene020461 |
| chr3.3 | mRNA | 82315975 | 82318191 | 82315975 | ID=MS.gene020461.t1;Parent=MS.gene020461 |
| chr3.3 | exon | 82315975 | 82316304 | 82315975 | ID=MS.gene020461.t1.exon1;Parent=MS.gene020461.t1 |
| chr3.3 | CDS | 82315975 | 82316304 | 82315975 | ID=cds.MS.gene020461.t1;Parent=MS.gene020461.t1 |
| chr3.3 | exon | 82316950 | 82318191 | 82316950 | ID=MS.gene020461.t1.exon2;Parent=MS.gene020461.t1 |
| chr3.3 | CDS | 82316950 | 82318191 | 82316950 | ID=cds.MS.gene020461.t1;Parent=MS.gene020461.t1 |
| Gene Sequence |
| Protein sequence |
