Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020587.t1 | XP_013450049.1 | 97.9 | 1148 | 24 | 0 | 1 | 1148 | 1 | 1148 | 0.00E+00 | 2236.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020587.t1 | Q9SCQ2 | 58.8 | 1158 | 451 | 7 | 1 | 1148 | 1 | 1142 | 0.0e+00 | 1320.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020587.t1 | A0A072U2X8 | 97.9 | 1148 | 24 | 0 | 1 | 1148 | 1 | 1148 | 0.0e+00 | 2236.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene47195 | MS.gene020587 | PPI |
MS.gene55545 | MS.gene020587 | PPI |
MS.gene020587 | MS.gene074045 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020587.t1 | MTR_7g103210 | 97.909 | 1148 | 24 | 0 | 1 | 1148 | 1 | 1148 | 0.0 | 2335 |
MS.gene020587.t1 | MTR_7g103210 | 97.985 | 1092 | 22 | 0 | 1 | 1092 | 1 | 1092 | 0.0 | 2220 |
MS.gene020587.t1 | MTR_2g033040 | 34.489 | 548 | 323 | 9 | 616 | 1148 | 498 | 1024 | 1.00e-99 | 340 |
MS.gene020587.t1 | MTR_4g094708 | 33.886 | 422 | 238 | 14 | 737 | 1145 | 3362 | 3755 | 5.61e-54 | 208 |
MS.gene020587.t1 | MTR_4g094705 | 33.886 | 422 | 238 | 14 | 737 | 1145 | 3341 | 3734 | 7.98e-54 | 207 |
MS.gene020587.t1 | MTR_3g099777 | 36.148 | 379 | 210 | 12 | 780 | 1145 | 3321 | 3680 | 3.05e-53 | 206 |
MS.gene020587.t1 | MTR_5g066710 | 35.884 | 379 | 211 | 12 | 780 | 1145 | 3293 | 3652 | 1.87e-52 | 203 |
MS.gene020587.t1 | MTR_2g025830 | 26.525 | 377 | 251 | 7 | 777 | 1145 | 457 | 815 | 8.97e-34 | 140 |
MS.gene020587.t1 | MTR_4g133120 | 25.333 | 375 | 252 | 7 | 771 | 1135 | 510 | 866 | 5.82e-32 | 135 |
MS.gene020587.t1 | MTR_2g025810 | 25.895 | 363 | 243 | 8 | 781 | 1135 | 456 | 800 | 8.27e-32 | 134 |
MS.gene020587.t1 | MTR_2g025790 | 25.575 | 391 | 257 | 10 | 759 | 1135 | 441 | 811 | 3.31e-31 | 132 |
MS.gene020587.t1 | MTR_2g025950 | 27.215 | 316 | 211 | 5 | 827 | 1135 | 459 | 762 | 5.79e-31 | 131 |
MS.gene020587.t1 | MTR_1g066940 | 26.609 | 466 | 267 | 12 | 738 | 1148 | 1104 | 1549 | 7.42e-27 | 119 |
MS.gene020587.t1 | MTR_1g066940 | 25.566 | 442 | 255 | 11 | 738 | 1125 | 1104 | 1525 | 2.05e-22 | 105 |
MS.gene020587.t1 | MTR_4g073370 | 27.726 | 321 | 192 | 7 | 861 | 1148 | 1568 | 1881 | 3.37e-18 | 91.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene020587.t1 | AT3G53090 | 58.606 | 1162 | 447 | 8 | 1 | 1148 | 1 | 1142 | 0.0 | 1379 |
MS.gene020587.t1 | AT3G53090 | 58.606 | 1162 | 447 | 8 | 1 | 1148 | 1 | 1142 | 0.0 | 1379 |
MS.gene020587.t1 | AT3G17205 | 35.651 | 561 | 298 | 8 | 616 | 1148 | 504 | 1029 | 1.70e-105 | 356 |
MS.gene020587.t1 | AT3G17205 | 35.651 | 561 | 298 | 8 | 616 | 1148 | 504 | 1029 | 1.70e-105 | 356 |
MS.gene020587.t1 | AT3G17205 | 35.651 | 561 | 298 | 8 | 616 | 1148 | 490 | 1015 | 1.81e-105 | 356 |
MS.gene020587.t1 | AT1G70320 | 34.353 | 425 | 232 | 14 | 737 | 1145 | 3262 | 3655 | 4.94e-54 | 208 |
MS.gene020587.t1 | AT1G55860 | 33.882 | 425 | 234 | 14 | 737 | 1145 | 3285 | 3678 | 2.35e-52 | 202 |
MS.gene020587.t1 | AT4G12570 | 27.922 | 308 | 201 | 4 | 827 | 1125 | 553 | 848 | 1.36e-27 | 121 |
MS.gene020587.t1 | AT4G38600 | 28.013 | 307 | 185 | 7 | 871 | 1148 | 1589 | 1888 | 9.60e-20 | 96.7 |
MS.gene020587.t1 | AT4G38600 | 28.013 | 307 | 185 | 7 | 871 | 1148 | 1589 | 1888 | 9.60e-20 | 96.7 |
MS.gene020587.t1 | AT5G02880 | 26.000 | 400 | 243 | 11 | 786 | 1148 | 1119 | 1502 | 1.03e-19 | 96.3 |
MS.gene020587.t1 | AT4G38600 | 28.013 | 307 | 182 | 8 | 871 | 1148 | 1498 | 1794 | 4.42e-18 | 91.3 |
Find 234 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCCAATGCAGTAATATATT+TGG | 0.190829 | 7.2:-9826735 | None:intergenic |
TTCTGCTGCTCTCTTCATTC+AGG | 0.214578 | 7.2:+9825322 | MS.gene020587:CDS |
TTGCGGATGCATTTGGAATT+AGG | 0.230785 | 7.2:-9830397 | None:intergenic |
CACAAATCAGGAGGACAAAA+TGG | 0.239895 | 7.2:-9829011 | None:intergenic |
AACTGTTTACAGGTGATTAA+AGG | 0.254464 | 7.2:+9833539 | MS.gene020587:intron |
TCTAAGTTTGTCAGATAAAA+TGG | 0.257595 | 7.2:-9826842 | None:intergenic |
GCCGGACAATCAAAATCTTT+TGG | 0.258101 | 7.2:+9832093 | MS.gene020587:CDS |
TCAAGAATGCAGTTACTTTC+AGG | 0.261047 | 7.2:+9831999 | MS.gene020587:intron |
CTTAATGTTGAAAGAGAGTA+TGG | 0.275180 | 7.2:+9825955 | MS.gene020587:intron |
TGTTCTCGTGGTCCATTACT+TGG | 0.276681 | 7.2:+9833608 | MS.gene020587:CDS |
GAGTATAGTGAATGCAATTC+AGG | 0.290036 | 7.2:+9826539 | MS.gene020587:CDS |
ATGTTAATGGTCATCATAAT+AGG | 0.301230 | 7.2:+9828928 | MS.gene020587:CDS |
GATAATCACACAAGTGAAAA+TGG | 0.303038 | 7.2:+9828434 | MS.gene020587:CDS |
AGCGTACTTCATAAATTTAC+AGG | 0.304154 | 7.2:+9828521 | MS.gene020587:CDS |
GGCCTATTCTCACCTGCTTT+TGG | 0.304609 | 7.2:+9828706 | MS.gene020587:CDS |
ATTTAGATCTTTCAGATGTA+TGG | 0.307807 | 7.2:+9828609 | MS.gene020587:CDS |
TTGCATGTGATGTCCCTCTT+TGG | 0.310830 | 7.2:+9834672 | MS.gene020587:CDS |
TTGGAGAGCCTGAACTCTTC+TGG | 0.312829 | 7.2:+9826188 | MS.gene020587:CDS |
CAACCGAAGATAGAAGAATT+TGG | 0.315811 | 7.2:+9826468 | MS.gene020587:CDS |
CCAGGGTGATGACGGCAAAT+TGG | 0.321818 | 7.2:+9826051 | MS.gene020587:CDS |
AGAAGCATACAACGCTCTTT+TGG | 0.337506 | 7.2:-9833569 | None:intergenic |
CTCAATACCCTAGTATATAA+TGG | 0.349634 | 7.2:+9828897 | MS.gene020587:CDS |
GTTCTTTAGTAGTACCTTAA+GGG | 0.352111 | 7.2:-9834753 | None:intergenic |
GTCCCTCTTTGGGCGACAAT+TGG | 0.352445 | 7.2:+9834683 | MS.gene020587:CDS |
TGGCCTTACGGAGGCTGGTC+TGG | 0.358087 | 7.2:+9830172 | MS.gene020587:CDS |
GAATAGAGATGCCACTAAAA+AGG | 0.359367 | 7.2:+9828193 | MS.gene020587:CDS |
TAGAACTCATGAAATTTATT+CGG | 0.360447 | 7.2:+9829079 | MS.gene020587:CDS |
GGATAAAGCTTCACGCAAAA+TGG | 0.361218 | 7.2:+9830007 | MS.gene020587:CDS |
CCTTGTGGGCCATGCCTCAT+AGG | 0.364074 | 7.2:-9828641 | None:intergenic |
AACTTTATATGTCTAGCAAC+AGG | 0.365146 | 7.2:+9827921 | MS.gene020587:CDS |
CAATGCTAGCGAGTTTAATC+AGG | 0.366542 | 7.2:+9831722 | MS.gene020587:CDS |
AGAAATTCTTGTCTCTTTCA+AGG | 0.369439 | 7.2:+9827869 | MS.gene020587:CDS |
TGTCATACATGGATCAATTT+AGG | 0.371550 | 7.2:+9828126 | MS.gene020587:CDS |
ACGGAGGCTGGTCTGGACTA+TGG | 0.375116 | 7.2:+9830179 | MS.gene020587:CDS |
TTTAACGGAGATGTCGGATT+TGG | 0.375417 | 7.2:+9827839 | MS.gene020587:CDS |
TTGAACTTTCAGTATCAGTT+TGG | 0.375534 | 7.2:-9828085 | None:intergenic |
CATACCTTGTGGATGGTAAA+TGG | 0.375807 | 7.2:-9833650 | None:intergenic |
GTAATGTTAACTGATCTAAA+AGG | 0.377030 | 7.2:+9826608 | MS.gene020587:CDS |
TGATTGACATTCAGTATATC+AGG | 0.379170 | 7.2:-9826875 | None:intergenic |
GCACAGCGACTTTCTTCTCT+TGG | 0.385657 | 7.2:+9826500 | MS.gene020587:CDS |
TCTGATAGTGATTTGAGAAA+TGG | 0.385958 | 7.2:-9826115 | None:intergenic |
ACTGTTACTGAAGAATCATT+TGG | 0.387330 | 7.2:+9831423 | MS.gene020587:CDS |
CACTTGATCCAGAGCTATAC+AGG | 0.390708 | 7.2:+9830570 | MS.gene020587:CDS |
GGGACAAGCCATTATATACT+AGG | 0.392459 | 7.2:-9828905 | None:intergenic |
AATGGCTTGTCCCATGTTAA+TGG | 0.393956 | 7.2:+9828915 | MS.gene020587:CDS |
ACTCCAAATTCTTCTATCTT+CGG | 0.395440 | 7.2:-9826471 | None:intergenic |
AAGTACGCTGACCCACTTAC+TGG | 0.398706 | 7.2:-9828507 | None:intergenic |
AGTAGTTACCTCTCTTCAAA+TGG | 0.401476 | 7.2:-9829176 | None:intergenic |
CTGGATTTCTCGTGAGATTG+TGG | 0.403174 | 7.2:+9828366 | MS.gene020587:CDS |
GATTTGCTTTACAATCTTGT+TGG | 0.404001 | 7.2:+9826169 | MS.gene020587:CDS |
CTGGGTGATAGCTTTCGTTT+TGG | 0.404427 | 7.2:-9826768 | None:intergenic |
TGGATTTCTCGTGAGATTGT+GGG | 0.407298 | 7.2:+9828367 | MS.gene020587:CDS |
CTGAAGAATCATTTGGCAAA+AGG | 0.407837 | 7.2:+9831430 | MS.gene020587:CDS |
CGTTGCTGCTCTAACTTGAA+TGG | 0.409171 | 7.2:-9828858 | None:intergenic |
CGGGGTCATATTGTTGAAGA+TGG | 0.423761 | 7.2:+9830080 | MS.gene020587:CDS |
TGCATGTGATGTCCCTCTTT+GGG | 0.424636 | 7.2:+9834673 | MS.gene020587:CDS |
CTCTGCAGCTTCAGCAGGAG+TGG | 0.425427 | 7.2:+9826006 | MS.gene020587:CDS |
CATTGAGATTGTAGTACGTC+GGG | 0.425547 | 7.2:+9830061 | MS.gene020587:CDS |
CTTCAGATGATTGAGTTCCT+TGG | 0.426636 | 7.2:+9830437 | MS.gene020587:CDS |
TATATCTAATGACTATTCCT+TGG | 0.428488 | 7.2:+9826918 | MS.gene020587:CDS |
GGAATATACCAGAAGAGTTC+AGG | 0.428710 | 7.2:-9826196 | None:intergenic |
GTTCTAGCAGCAACTGCAAC+TGG | 0.429510 | 7.2:-9829062 | None:intergenic |
AACTTGCTACAATACCCTTA+AGG | 0.432752 | 7.2:+9834739 | MS.gene020587:CDS |
GAGTTCCTTGGAAGAGTAGT+TGG | 0.440856 | 7.2:+9830449 | MS.gene020587:CDS |
GTTGGTAAAGCTCTTTATGA+AGG | 0.444314 | 7.2:+9830467 | MS.gene020587:CDS |
GTAAAGATGGGGCCAGTAAG+TGG | 0.446385 | 7.2:+9828495 | MS.gene020587:CDS |
GAACTCAACTAAACCTTTCA+CGG | 0.448125 | 7.2:-9826675 | None:intergenic |
TAATGGACCACGAGAACAAC+TGG | 0.449832 | 7.2:-9833603 | None:intergenic |
TTTATCTGACAAACTTAGAT+GGG | 0.450283 | 7.2:+9826846 | MS.gene020587:CDS |
AATGATAGCATGTTAAGAAC+TGG | 0.451530 | 7.2:-9828338 | None:intergenic |
GCAGGAGAAAGCCACAAATC+AGG | 0.451926 | 7.2:-9829023 | None:intergenic |
GATTTACCTTCACATACATA+AGG | 0.453949 | 7.2:-9830595 | None:intergenic |
TGCCAAATATATTACTGCAT+TGG | 0.454740 | 7.2:+9826733 | MS.gene020587:CDS |
CCTCTTTGGGCGACAATTGG+AGG | 0.460837 | 7.2:+9834686 | MS.gene020587:CDS |
ATGACATTATTAACGACTCA+TGG | 0.464243 | 7.2:-9828109 | None:intergenic |
ATCTCAATGGCTCGTGAACC+AGG | 0.465594 | 7.2:-9830047 | None:intergenic |
GGTTGCTCTGCAGCTTCAGC+AGG | 0.469167 | 7.2:+9826001 | MS.gene020587:CDS |
TTCGACAATTAAATTCGCTT+GGG | 0.470304 | 7.2:+9830105 | MS.gene020587:CDS |
TATGCTATCACTTCAAATGC+CGG | 0.471998 | 7.2:+9835187 | MS.gene020587:CDS |
TTTAGATCTTTCAGATGTAT+GGG | 0.474644 | 7.2:+9828610 | MS.gene020587:CDS |
ATTCACTGATGACAAAAGAT+TGG | 0.475071 | 7.2:-9828174 | None:intergenic |
AACATGCTATCATTTACTCC+TGG | 0.476548 | 7.2:+9828347 | MS.gene020587:CDS |
GAGAAGAAAGTCGCTGTGCC+TGG | 0.479684 | 7.2:-9826496 | None:intergenic |
TTTCGACAATTAAATTCGCT+TGG | 0.480501 | 7.2:+9830104 | MS.gene020587:CDS |
TTCAAGGCTATTCCACCAGT+TGG | 0.482014 | 7.2:+9827885 | MS.gene020587:CDS |
CTGATAGTGATTTGAGAAAT+GGG | 0.483024 | 7.2:-9826114 | None:intergenic |
AAAGGTTTAGTTGAGTTCAC+AGG | 0.485967 | 7.2:+9826680 | MS.gene020587:CDS |
AGGCTATTCCACCAGTTGGT+TGG | 0.486113 | 7.2:+9827889 | MS.gene020587:CDS |
ATAAGGCTCCTGTATAGCTC+TGG | 0.488201 | 7.2:-9830578 | None:intergenic |
CACAATCTCACGAGAAATCC+AGG | 0.488580 | 7.2:-9828365 | None:intergenic |
TACTTCGATCTCAAACAGTC+TGG | 0.488854 | 7.2:+9828220 | MS.gene020587:CDS |
TGGGTGACAAAGAACAGAAA+TGG | 0.489733 | 7.2:-9826095 | None:intergenic |
CTTGTCTTGATAATATTGAA+TGG | 0.490541 | 7.2:+9828042 | MS.gene020587:CDS |
CTTACAATTAATGTATGAAA+GGG | 0.491261 | 7.2:+9828977 | MS.gene020587:CDS |
AGCTTTGCTCTCAAAGTGCC+TGG | 0.492135 | 7.2:-9835160 | None:intergenic |
GAGAGTATGGAGGCGCTTCA+AGG | 0.494130 | 7.2:+9825968 | MS.gene020587:intron |
GTTTCGTGAATTCATCAAGA+TGG | 0.495419 | 7.2:+9829986 | MS.gene020587:CDS |
CACTCTAGCAGAAAGCCTAC+TGG | 0.496927 | 7.2:+9828019 | MS.gene020587:CDS |
GAAAATAACTCTGTAGACTC+TGG | 0.498822 | 7.2:+9827948 | MS.gene020587:CDS |
AAATCAAGAAAGTTCAAATC+CGG | 0.499957 | 7.2:-9835206 | None:intergenic |
ATGATGAATCATCAGATCTC+AGG | 0.500193 | 7.2:-9829106 | None:intergenic |
TGTCAGTGAATGTGGCCTTA+CGG | 0.500904 | 7.2:+9830160 | MS.gene020587:CDS |
GTGGTTACAGTGAGGGGAGC+CGG | 0.502385 | 7.2:+9832075 | MS.gene020587:CDS |
AGACTACAAACTCAACCAAC+AGG | 0.504373 | 7.2:+9831533 | MS.gene020587:CDS |
GCGCTTCAAGGTTACAAAGA+TGG | 0.505805 | 7.2:+9825980 | MS.gene020587:CDS |
TTCGCGAGAGACCAACCAAC+TGG | 0.505914 | 7.2:-9827900 | None:intergenic |
GGTGCAGAGTGACTGCCAAT+TGG | 0.506632 | 7.2:-9828575 | None:intergenic |
CATGTGGTTGAGCTCAAGTC+TGG | 0.507203 | 7.2:+9831453 | MS.gene020587:CDS |
TAGGAGGCTGTCTGAAGTTG+AGG | 0.507555 | 7.2:-9830378 | None:intergenic |
TCATCATCTTCCCTGAGTCT+AGG | 0.510653 | 7.2:+9829122 | MS.gene020587:CDS |
ATAGATTTGTGCTTTAAAGC+AGG | 0.512627 | 7.2:-9826971 | None:intergenic |
AGATGCCATTGCTGACAGAC+AGG | 0.514022 | 7.2:-9828149 | None:intergenic |
GTAGTTACCTCTCTTCAAAT+GGG | 0.514857 | 7.2:-9829175 | None:intergenic |
CTCTGGAGACAAACATATGT+CGG | 0.518715 | 7.2:+9828412 | MS.gene020587:CDS |
GAATGTGGCCTTACGGAGGC+TGG | 0.522480 | 7.2:+9830167 | MS.gene020587:CDS |
AACCAAAAGCAGGTGAGAAT+AGG | 0.523489 | 7.2:-9828708 | None:intergenic |
ACAAATCAGGAGGACAAAAT+GGG | 0.523633 | 7.2:-9829010 | None:intergenic |
AGATCTAAATTGACTCTGCT+TGG | 0.525378 | 7.2:-9828596 | None:intergenic |
GCTTACAATTAATGTATGAA+AGG | 0.526119 | 7.2:+9828976 | MS.gene020587:CDS |
CTGATCTTATCTCTCCGTCC+TGG | 0.528038 | 7.2:+9831688 | MS.gene020587:CDS |
AAAGCTTCACGCAAAATGGC+TGG | 0.528685 | 7.2:+9830011 | MS.gene020587:CDS |
GTGTTTACGAGGTGCATCCA+TGG | 0.529616 | 7.2:-9825092 | None:intergenic |
CAGTTATACCAGGGTGATGA+CGG | 0.531457 | 7.2:+9826043 | MS.gene020587:CDS |
TCATTCATGCAGAACTATGA+TGG | 0.532632 | 7.2:+9831372 | MS.gene020587:intron |
CATCGGTGAACAGTTATACC+AGG | 0.533221 | 7.2:+9826033 | MS.gene020587:CDS |
CAGCAACTGCAACTGGTGGC+CGG | 0.536160 | 7.2:-9829055 | None:intergenic |
CCTATGAGGCATGGCCCACA+AGG | 0.537527 | 7.2:+9828641 | MS.gene020587:CDS |
ACAGACCGCACAGATCCAAT+TGG | 0.538409 | 7.2:+9828560 | MS.gene020587:CDS |
AGTATAGTGAATGCAATTCA+GGG | 0.540454 | 7.2:+9826540 | MS.gene020587:CDS |
TACAGCTTCCCACATACAAA+CGG | 0.541277 | 7.2:+9835137 | MS.gene020587:intron |
TGGGAAAACATGGGGAGTCA+TGG | 0.541754 | 7.2:-9829156 | None:intergenic |
CGGATGCATTTGGAATTAGG+AGG | 0.541906 | 7.2:-9830394 | None:intergenic |
AGTGCCTGGCCGTTTGTATG+TGG | 0.542565 | 7.2:-9835146 | None:intergenic |
GATGCAGATTTAGCCGTGAA+AGG | 0.544292 | 7.2:+9826662 | MS.gene020587:CDS |
GTTCTCGTGGTCCATTACTT+GGG | 0.545099 | 7.2:+9833609 | MS.gene020587:CDS |
GACTCTGGATCCTTCAGTCA+AGG | 0.546796 | 7.2:+9827963 | MS.gene020587:CDS |
TTGTAGCAAGTTGAAGCTGA+TGG | 0.548257 | 7.2:-9834728 | None:intergenic |
GTTGAGAGGAGCGAGTGCGA+AGG | 0.550427 | 7.2:+9825226 | MS.gene020587:CDS |
TCATCATAATAGGCCCCTCA+TGG | 0.553272 | 7.2:+9828938 | MS.gene020587:CDS |
TCTCTTCAAATGGGAAAACA+TGG | 0.553838 | 7.2:-9829166 | None:intergenic |
ACTGGTAATGATCCACGTAC+TGG | 0.554528 | 7.2:-9828320 | None:intergenic |
GTCGTTAATAATGTCATACA+TGG | 0.555560 | 7.2:+9828115 | MS.gene020587:CDS |
TAGAAGAATTTGGAGTTACC+AGG | 0.555693 | 7.2:+9826478 | MS.gene020587:CDS |
AAAAGTAACACGCGATACAC+TGG | 0.557806 | 7.2:+9832053 | MS.gene020587:CDS |
GCTGGTGAAATTTCTGAACC+TGG | 0.558191 | 7.2:+9830029 | MS.gene020587:CDS |
TGTTAACTGATCTAAAAGGA+TGG | 0.559734 | 7.2:+9826612 | MS.gene020587:CDS |
CCGACGTACTACAATCTCAA+TGG | 0.559916 | 7.2:-9830060 | None:intergenic |
CTCCAATTGTCGCCCAAAGA+GGG | 0.560123 | 7.2:-9834685 | None:intergenic |
TCCTTCAGTCAAGGTTTAGA+CGG | 0.561797 | 7.2:+9827972 | MS.gene020587:CDS |
CTCTTCAAATGGGAAAACAT+GGG | 0.562504 | 7.2:-9829165 | None:intergenic |
AAGTATTTGAACCCAAGTAA+TGG | 0.563712 | 7.2:-9833620 | None:intergenic |
TATTATGATGACCATTAACA+TGG | 0.564426 | 7.2:-9828926 | None:intergenic |
TGACATTATTAACGACTCAT+GGG | 0.568612 | 7.2:-9828108 | None:intergenic |
TTTGTCACCAGTTGTTCTCG+TGG | 0.574734 | 7.2:+9833596 | MS.gene020587:CDS |
TCTGCAGCTTCAGCAGGAGT+GGG | 0.576891 | 7.2:+9826007 | MS.gene020587:CDS |
CTTTACCAACTACTCTTCCA+AGG | 0.577236 | 7.2:-9830454 | None:intergenic |
CCAAGATCATACCTTGTGGA+TGG | 0.577657 | 7.2:-9833657 | None:intergenic |
GGATTTCAAATAATTTGTTG+AGG | 0.578553 | 7.2:+9826072 | MS.gene020587:CDS |
CCTCCAATTGTCGCCCAAAG+AGG | 0.580527 | 7.2:-9834686 | None:intergenic |
AGTCCAGACCAGCCTCCGTA+AGG | 0.581216 | 7.2:-9830175 | None:intergenic |
CTTCCCACATACAAACGGCC+AGG | 0.581720 | 7.2:+9835142 | MS.gene020587:CDS |
GTATCATTTGTCAGTGAATG+TGG | 0.581799 | 7.2:+9830152 | MS.gene020587:CDS |
ACTGTTTGAGATCGAAGTAT+CGG | 0.583328 | 7.2:-9828216 | None:intergenic |
ACTGATCTAAAAGGATGGAA+AGG | 0.584473 | 7.2:+9826617 | MS.gene020587:CDS |
TTATAACAGAGCCTAGACTC+AGG | 0.586753 | 7.2:-9829133 | None:intergenic |
TGTCATCAAGAACCAAAAGC+AGG | 0.586888 | 7.2:-9828718 | None:intergenic |
TTGATTCAGGTATCGTTGAG+AGG | 0.587715 | 7.2:+9825212 | MS.gene020587:intron |
GGACAAGCCATTATATACTA+GGG | 0.588422 | 7.2:-9828904 | None:intergenic |
GAGATTGTGGGGTGAACTTG+AGG | 0.588635 | 7.2:+9828379 | MS.gene020587:CDS |
ATTCACTGACAAATGATACA+TGG | 0.589415 | 7.2:-9830148 | None:intergenic |
TTAGGCCTGTCTGTCAGCAA+TGG | 0.593042 | 7.2:+9828144 | MS.gene020587:CDS |
ATCATTTGGCAAAAGGCATG+TGG | 0.593574 | 7.2:+9831437 | MS.gene020587:CDS |
TACACTGGTGGTTACAGTGA+GGG | 0.594750 | 7.2:+9832068 | MS.gene020587:CDS |
TTGAATAATTTCAACCAGGA+CGG | 0.595516 | 7.2:-9831702 | None:intergenic |
TAAAGATGGGGCCAGTAAGT+GGG | 0.596487 | 7.2:+9828496 | MS.gene020587:CDS |
CTGCTAGAGTGACAATAACA+TGG | 0.601136 | 7.2:-9828007 | None:intergenic |
TGTTTACGAGGTGCATCCAT+GGG | 0.601166 | 7.2:-9825091 | None:intergenic |
TCGAGACGATCTTCTTCAGA+AGG | 0.602388 | 7.2:+9825256 | MS.gene020587:CDS |
TTATCTGACAAACTTAGATG+GGG | 0.604181 | 7.2:+9826847 | MS.gene020587:CDS |
TATGGGACATAGAACCTATG+AGG | 0.604881 | 7.2:+9828627 | MS.gene020587:CDS |
TTGTTCAAAAGCTATTGGGA+CGG | 0.605651 | 7.2:+9830522 | MS.gene020587:CDS |
CAGGAGCCTTATGTATGTGA+AGG | 0.607275 | 7.2:+9830589 | MS.gene020587:CDS |
AGAATGCAGTTACTTTCAGG+TGG | 0.609514 | 7.2:+9832002 | MS.gene020587:intron |
ACCGTCTAAACCTTGACTGA+AGG | 0.610362 | 7.2:-9827973 | None:intergenic |
TTTCTCAAATCACTATCAGA+AGG | 0.613385 | 7.2:+9826118 | MS.gene020587:CDS |
AAGGTTTAGTTGAGTTCACA+GGG | 0.617416 | 7.2:+9826681 | MS.gene020587:CDS |
CCAATTTGCCGTCATCACCC+TGG | 0.618162 | 7.2:-9826051 | None:intergenic |
GACATAGAACCTATGAGGCA+TGG | 0.618981 | 7.2:+9828632 | MS.gene020587:CDS |
TCAGCAGGAGTGGGAGACAT+CGG | 0.622033 | 7.2:+9826016 | MS.gene020587:CDS |
TTCACAGGGAGTAATAAAAG+TGG | 0.623278 | 7.2:+9826695 | MS.gene020587:CDS |
ACTGACAAATGATACATGGA+TGG | 0.625642 | 7.2:-9830144 | None:intergenic |
AAAGCAGGTAGAAGAACATG+TGG | 0.628339 | 7.2:-9826956 | None:intergenic |
CATTAATTGTAAGCATCTGA+CGG | 0.629899 | 7.2:-9828967 | None:intergenic |
CCATTGAGATTGTAGTACGT+CGG | 0.629993 | 7.2:+9830060 | MS.gene020587:CDS |
GCGAGAGACCAACCAACTGG+TGG | 0.633643 | 7.2:-9827897 | None:intergenic |
GGATTTCTCGTGAGATTGTG+GGG | 0.634990 | 7.2:+9828368 | MS.gene020587:CDS |
TCTTCAAATGGGAAAACATG+GGG | 0.636883 | 7.2:-9829164 | None:intergenic |
ATCTGACGGCACAATCCATG+AGG | 0.640617 | 7.2:-9828953 | None:intergenic |
ACACTGGTGGTTACAGTGAG+GGG | 0.641000 | 7.2:+9832069 | MS.gene020587:CDS |
GTGCCTGGCCGTTTGTATGT+GGG | 0.641728 | 7.2:-9835145 | None:intergenic |
TATAACAGAGCCTAGACTCA+GGG | 0.644091 | 7.2:-9829132 | None:intergenic |
GAACTATGATGGTGATGTCA+AGG | 0.644549 | 7.2:+9831383 | MS.gene020587:intron |
TCTGACGGCACAATCCATGA+GGG | 0.645631 | 7.2:-9828952 | None:intergenic |
TTCTTTGTTTAGATTCAGAG+CGG | 0.647615 | 7.2:+9826420 | MS.gene020587:intron |
AAGAGTACCTGGTGTTTACG+AGG | 0.649609 | 7.2:-9825103 | None:intergenic |
GGAGAAAGCCACAAATCAGG+AGG | 0.650338 | 7.2:-9829020 | None:intergenic |
GGATGCACCTCGTAAACACC+AGG | 0.650963 | 7.2:+9825096 | MS.gene020587:CDS |
GAGGCTGGTCTGGACTATGG+TGG | 0.652496 | 7.2:+9830182 | MS.gene020587:CDS |
GGGACATGTTGCACAAACCA+AGG | 0.654107 | 7.2:-9826935 | None:intergenic |
CTAGCAGCAACTGCAACTGG+TGG | 0.656060 | 7.2:-9829059 | None:intergenic |
ACTTTATATGTCTAGCAACA+GGG | 0.660742 | 7.2:+9827922 | MS.gene020587:CDS |
TATTATCAAGACAAGCCAGT+AGG | 0.662398 | 7.2:-9828034 | None:intergenic |
TCAGCTTTGAGTCCAGTACG+TGG | 0.664638 | 7.2:+9828308 | MS.gene020587:CDS |
GTGGTTGAGCTCAAGTCTGG+TGG | 0.664894 | 7.2:+9831456 | MS.gene020587:CDS |
CAAAACGAAAGCTATCACCC+AGG | 0.664916 | 7.2:+9826769 | MS.gene020587:CDS |
ATTATGATGACCATTAACAT+GGG | 0.665086 | 7.2:-9828925 | None:intergenic |
AGCATTGAATAATTTCAACC+AGG | 0.665959 | 7.2:-9831706 | None:intergenic |
TGAATCATCAGATCTCAGGT+TGG | 0.672269 | 7.2:-9829102 | None:intergenic |
GTGCAATAACTTTAGCTGTG+CGG | 0.677849 | 7.2:+9826819 | MS.gene020587:CDS |
GATGCAGTACATACATGCGA+TGG | 0.682992 | 7.2:+9831509 | MS.gene020587:CDS |
GTATAGTGAATGCAATTCAG+GGG | 0.687591 | 7.2:+9826541 | MS.gene020587:CDS |
CTGACGGCACAATCCATGAG+GGG | 0.689338 | 7.2:-9828951 | None:intergenic |
ATCGGTGAACAGTTATACCA+GGG | 0.694160 | 7.2:+9826034 | MS.gene020587:CDS |
GACTGCCAATTGGATCTGTG+CGG | 0.694175 | 7.2:-9828565 | None:intergenic |
CGGCTAAATCTGCATCTAAG+CGG | 0.695268 | 7.2:-9826655 | None:intergenic |
TTGGAGGACAAGATGTAGAG+CGG | 0.695288 | 7.2:+9834702 | MS.gene020587:CDS |
AAGCAGGTAGAAGAACATGT+GGG | 0.703676 | 7.2:-9826955 | None:intergenic |
CAGTGAATGTGGCCTTACGG+AGG | 0.706179 | 7.2:+9830163 | MS.gene020587:CDS |
AGTAACACGCGATACACTGG+TGG | 0.707755 | 7.2:+9832056 | MS.gene020587:CDS |
ATTGAGATTGTAGTACGTCG+GGG | 0.710397 | 7.2:+9830062 | MS.gene020587:CDS |
GCCACCATTTACCATCCACA+AGG | 0.717521 | 7.2:+9833646 | MS.gene020587:CDS |
AATGTTGAAAGAGAGTATGG+AGG | 0.728338 | 7.2:+9825958 | MS.gene020587:intron |
ATACACTGGTGGTTACAGTG+AGG | 0.738211 | 7.2:+9832067 | MS.gene020587:CDS |
ACCTTGTGGATGGTAAATGG+TGG | 0.753265 | 7.2:-9833647 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 9825094 | 9835225 | 9825094 | ID=MS.gene020587 |
chr7.2 | mRNA | 9825094 | 9835225 | 9825094 | ID=MS.gene020587.t1;Parent=MS.gene020587 |
chr7.2 | exon | 9825094 | 9825117 | 9825094 | ID=MS.gene020587.t1.exon1;Parent=MS.gene020587.t1 |
chr7.2 | CDS | 9825094 | 9825117 | 9825094 | ID=cds.MS.gene020587.t1;Parent=MS.gene020587.t1 |
chr7.2 | exon | 9825221 | 9825343 | 9825221 | ID=MS.gene020587.t1.exon2;Parent=MS.gene020587.t1 |
chr7.2 | CDS | 9825221 | 9825343 | 9825221 | ID=cds.MS.gene020587.t1;Parent=MS.gene020587.t1 |
chr7.2 | exon | 9825969 | 9826209 | 9825969 | ID=MS.gene020587.t1.exon3;Parent=MS.gene020587.t1 |
chr7.2 | CDS | 9825969 | 9826209 | 9825969 | ID=cds.MS.gene020587.t1;Parent=MS.gene020587.t1 |
chr7.2 | exon | 9826432 | 9827021 | 9826432 | ID=MS.gene020587.t1.exon4;Parent=MS.gene020587.t1 |
chr7.2 | CDS | 9826432 | 9827021 | 9826432 | ID=cds.MS.gene020587.t1;Parent=MS.gene020587.t1 |
chr7.2 | exon | 9827822 | 9828760 | 9827822 | ID=MS.gene020587.t1.exon5;Parent=MS.gene020587.t1 |
chr7.2 | CDS | 9827822 | 9828760 | 9827822 | ID=cds.MS.gene020587.t1;Parent=MS.gene020587.t1 |
chr7.2 | exon | 9828855 | 9829189 | 9828855 | ID=MS.gene020587.t1.exon6;Parent=MS.gene020587.t1 |
chr7.2 | CDS | 9828855 | 9829189 | 9828855 | ID=cds.MS.gene020587.t1;Parent=MS.gene020587.t1 |
chr7.2 | exon | 9829977 | 9830255 | 9829977 | ID=MS.gene020587.t1.exon7;Parent=MS.gene020587.t1 |
chr7.2 | CDS | 9829977 | 9830255 | 9829977 | ID=cds.MS.gene020587.t1;Parent=MS.gene020587.t1 |
chr7.2 | exon | 9830358 | 9830610 | 9830358 | ID=MS.gene020587.t1.exon8;Parent=MS.gene020587.t1 |
chr7.2 | CDS | 9830358 | 9830610 | 9830358 | ID=cds.MS.gene020587.t1;Parent=MS.gene020587.t1 |
chr7.2 | exon | 9831384 | 9831554 | 9831384 | ID=MS.gene020587.t1.exon9;Parent=MS.gene020587.t1 |
chr7.2 | CDS | 9831384 | 9831554 | 9831384 | ID=cds.MS.gene020587.t1;Parent=MS.gene020587.t1 |
chr7.2 | exon | 9831651 | 9831743 | 9831651 | ID=MS.gene020587.t1.exon10;Parent=MS.gene020587.t1 |
chr7.2 | CDS | 9831651 | 9831743 | 9831651 | ID=cds.MS.gene020587.t1;Parent=MS.gene020587.t1 |
chr7.2 | exon | 9832011 | 9832118 | 9832011 | ID=MS.gene020587.t1.exon11;Parent=MS.gene020587.t1 |
chr7.2 | CDS | 9832011 | 9832118 | 9832011 | ID=cds.MS.gene020587.t1;Parent=MS.gene020587.t1 |
chr7.2 | exon | 9833551 | 9833667 | 9833551 | ID=MS.gene020587.t1.exon12;Parent=MS.gene020587.t1 |
chr7.2 | CDS | 9833551 | 9833667 | 9833551 | ID=cds.MS.gene020587.t1;Parent=MS.gene020587.t1 |
chr7.2 | exon | 9834671 | 9834760 | 9834671 | ID=MS.gene020587.t1.exon13;Parent=MS.gene020587.t1 |
chr7.2 | CDS | 9834671 | 9834760 | 9834671 | ID=cds.MS.gene020587.t1;Parent=MS.gene020587.t1 |
chr7.2 | exon | 9835142 | 9835225 | 9835142 | ID=MS.gene020587.t1.exon14;Parent=MS.gene020587.t1 |
chr7.2 | CDS | 9835142 | 9835225 | 9835142 | ID=cds.MS.gene020587.t1;Parent=MS.gene020587.t1 |
Gene Sequence |
Protein sequence |