Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021190.t1 | XP_013452118.1 | 96.7 | 760 | 21 | 2 | 1 | 756 | 1 | 760 | 0.00E+00 | 1392.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021190.t1 | F4I4B6 | 64.7 | 753 | 246 | 8 | 12 | 755 | 6 | 747 | 5.2e-256 | 885.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021190.t1 | A0A072U9N7 | 96.7 | 760 | 21 | 2 | 1 | 756 | 1 | 760 | 0.0e+00 | 1392.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene059433 | MS.gene021190 | PPI |
| MS.gene067568 | MS.gene021190 | PPI |
| MS.gene021190 | MS.gene006890 | PPI |
| MS.gene006891 | MS.gene021190 | PPI |
| MS.gene56433 | MS.gene021190 | PPI |
| MS.gene021190 | MS.gene059432 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021190.t1 | MTR_6g045363 | 96.711 | 760 | 21 | 2 | 1 | 756 | 1 | 760 | 0.0 | 1500 |
| MS.gene021190.t1 | MTR_1g111120 | 89.007 | 755 | 77 | 3 | 3 | 752 | 1 | 754 | 0.0 | 1324 |
| MS.gene021190.t1 | MTR_4g005930 | 56.972 | 753 | 301 | 12 | 14 | 754 | 8 | 749 | 0.0 | 764 |
| MS.gene021190.t1 | MTR_4g083940 | 35.302 | 728 | 428 | 18 | 45 | 747 | 18 | 727 | 1.90e-116 | 369 |
| MS.gene021190.t1 | MTR_1g069620 | 24.933 | 750 | 497 | 16 | 11 | 735 | 21 | 729 | 1.17e-47 | 182 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021190.t1 | AT1G10385 | 64.248 | 758 | 241 | 9 | 12 | 755 | 6 | 747 | 0.0 | 933 |
| MS.gene021190.t1 | AT5G49830 | 55.902 | 737 | 299 | 11 | 26 | 752 | 15 | 735 | 0.0 | 741 |
| MS.gene021190.t1 | AT5G49830 | 53.585 | 767 | 301 | 10 | 26 | 752 | 15 | 766 | 0.0 | 726 |
| MS.gene021190.t1 | AT5G49830 | 56.108 | 704 | 286 | 8 | 58 | 752 | 108 | 797 | 0.0 | 714 |
| MS.gene021190.t1 | AT1G10180 | 33.333 | 720 | 419 | 17 | 45 | 737 | 18 | 703 | 1.17e-109 | 351 |
Find 135 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGAATTCTCAAATGTATT+TGG | 0.109776 | 6.1:+42844687 | MS.gene021190:CDS |
| ATAATTTGTGCAGCTCTATT+TGG | 0.173256 | 6.1:+42845826 | MS.gene021190:intron |
| ATGCAGCTTGGTTGGATAAA+AGG | 0.227929 | 6.1:-42842545 | None:intergenic |
| TTATCTTGTTGAACTTAAAA+AGG | 0.231865 | 6.1:+42841806 | MS.gene021190:CDS |
| TTTCTGATGACCAAGCCTTT+TGG | 0.263542 | 6.1:+42845175 | MS.gene021190:CDS |
| CTCATTCATGCTACGTGATT+TGG | 0.272588 | 6.1:-42840785 | None:intergenic |
| ATTGCTATAAAGATGTTAAC+TGG | 0.301872 | 6.1:+42846732 | MS.gene021190:CDS |
| TTCTTCAGTTCACGCTGTTC+CGG | 0.308671 | 6.1:-42844574 | None:intergenic |
| CTTTAGCTTCTGCTGATGAT+TGG | 0.309010 | 6.1:+42843390 | MS.gene021190:CDS |
| TATGTCTGAATCTTCGTTTC+CGG | 0.313165 | 6.1:-42842613 | None:intergenic |
| GACATTGAACGAACTCCTTT+AGG | 0.333382 | 6.1:+42845201 | MS.gene021190:CDS |
| ATTGATGCTGTTGCTGCTAC+AGG | 0.334893 | 6.1:+42845938 | MS.gene021190:CDS |
| GTGAATTCTCAAATGTATTT+GGG | 0.341029 | 6.1:+42844688 | MS.gene021190:CDS |
| CAGTACATCAAAAGAGATTT+CGG | 0.348433 | 6.1:+42842491 | MS.gene021190:intron |
| ATCTCTGCGCGGCGTGTTGA+TGG | 0.349127 | 6.1:-42842891 | None:intergenic |
| CTTATCACTGAGAGTGAGAT+TGG | 0.350371 | 6.1:-42840713 | None:intergenic |
| AACCAAGCTGCATTGGTTCA+TGG | 0.370121 | 6.1:+42842555 | MS.gene021190:CDS |
| CAAATTCAACTCAATGGTTC+AGG | 0.391880 | 6.1:+42843520 | MS.gene021190:CDS |
| TCACTCTCAGTGATAAGCTT+AGG | 0.406393 | 6.1:+42840719 | MS.gene021190:CDS |
| GAGACCTGAATGGTTTCCTT+CGG | 0.406774 | 6.1:+42844729 | MS.gene021190:CDS |
| TTACAGAAACAGTGATACTA+TGG | 0.408367 | 6.1:+42845151 | MS.gene021190:CDS |
| ACTACAAGGAAAAGTAATAC+TGG | 0.415588 | 6.1:+42843431 | MS.gene021190:CDS |
| AGGTCCTCTTGGCCTTCAAC+AGG | 0.416523 | 6.1:+42845221 | MS.gene021190:CDS |
| TCCACTTGAAATCCTACAAT+TGG | 0.420645 | 6.1:+42844279 | MS.gene021190:CDS |
| AGACCTGAATGGTTTCCTTC+GGG | 0.421720 | 6.1:+42844730 | MS.gene021190:CDS |
| CACTCTCAGTGATAAGCTTA+GGG | 0.423280 | 6.1:+42840720 | MS.gene021190:CDS |
| CGAACTCCTTTAGGTCCTCT+TGG | 0.424056 | 6.1:+42845210 | MS.gene021190:CDS |
| GTGCAAGTCCATCCAATTGT+AGG | 0.424062 | 6.1:-42844291 | None:intergenic |
| AGGCGAGAATCCGTTTCTTA+AGG | 0.426489 | 6.1:-42843187 | None:intergenic |
| ATTCCCGAAGGAAACCATTC+AGG | 0.427039 | 6.1:-42844733 | None:intergenic |
| ATTTGGGTATGGAGGAGAAA+GGG | 0.435406 | 6.1:+42844704 | MS.gene021190:CDS |
| TGAAGTGCTTGAAACAAACT+TGG | 0.441589 | 6.1:-42842807 | None:intergenic |
| TTCTCAAATGTATTTGGGTA+TGG | 0.441886 | 6.1:+42844693 | MS.gene021190:CDS |
| AAACTAGAATAAGAAGAAAC+AGG | 0.443054 | 6.1:-42843461 | None:intergenic |
| GTTGGATAAAAGGTTTCTCA+TGG | 0.445565 | 6.1:-42842535 | None:intergenic |
| TGGTTATGTGTGGGCTGATC+CGG | 0.458407 | 6.1:-42846799 | None:intergenic |
| TTGGATGGACTTGCACTAGA+AGG | 0.467374 | 6.1:+42844298 | MS.gene021190:CDS |
| CTTGATGAAACGGATCCTCT+TGG | 0.476487 | 6.1:-42840664 | None:intergenic |
| ACTTCCAATGCTTGATGAAA+CGG | 0.477793 | 6.1:-42840674 | None:intergenic |
| TCTCAGCTAATAGAACATCA+AGG | 0.478648 | 6.1:-42842704 | None:intergenic |
| TTTCGCTTCTCCTTAAGAAA+CGG | 0.479033 | 6.1:+42843177 | MS.gene021190:CDS |
| TTGGAAGCAACATAGGCATT+GGG | 0.479670 | 6.1:-42840766 | None:intergenic |
| TTTATCCAACCAAGCTGCAT+TGG | 0.482858 | 6.1:+42842548 | MS.gene021190:CDS |
| CTCGCCTCCATAGCTGCATC+GGG | 0.484353 | 6.1:+42843203 | MS.gene021190:CDS |
| AGTAACACTCTACCTGTTGA+AGG | 0.484999 | 6.1:-42845233 | None:intergenic |
| AAAGAGATTTCGGATCTTGA+GGG | 0.487146 | 6.1:+42842501 | MS.gene021190:CDS |
| TCGTTCAATGTCATCCCAAA+AGG | 0.488799 | 6.1:-42845190 | None:intergenic |
| ATCCGATGTTGCTTGTGAAA+TGG | 0.490348 | 6.1:-42843075 | None:intergenic |
| TACATATATACGTACCTGTT+GGG | 0.490587 | 6.1:-42845968 | None:intergenic |
| TTTGGAAGCAACATAGGCAT+TGG | 0.491391 | 6.1:-42840767 | None:intergenic |
| TGCTCACAAATTCAACTCAA+TGG | 0.494222 | 6.1:+42843514 | MS.gene021190:CDS |
| AAATTATCACATAGCACAAA+AGG | 0.496794 | 6.1:+42844508 | MS.gene021190:CDS |
| ATCTTCGTTTCCGGTCACTA+AGG | 0.497011 | 6.1:-42842604 | None:intergenic |
| ATACATCTGAGCTAGTAACT+TGG | 0.498432 | 6.1:+42843132 | MS.gene021190:CDS |
| TCTCGCCTCCATAGCTGCAT+CGG | 0.499280 | 6.1:+42843202 | MS.gene021190:CDS |
| AAGACCTCCCGATGCAGCTA+TGG | 0.499282 | 6.1:-42843210 | None:intergenic |
| CTACAGGGCTAGATCCCAAC+AGG | 0.500114 | 6.1:+42845954 | MS.gene021190:CDS |
| TTGGTTCATGGTTTAGCAGA+AGG | 0.500660 | 6.1:+42842567 | MS.gene021190:CDS |
| AGATCAAATCAAAATGTCAA+TGG | 0.501515 | 6.1:+42840621 | None:intergenic |
| GAAAAGAGTGGAAGAATCAA+TGG | 0.504829 | 6.1:+42842725 | MS.gene021190:CDS |
| TCAACAAACCACTCATCCTC+TGG | 0.505796 | 6.1:-42846699 | None:intergenic |
| ACGAGATAAGTAACGACCTT+GGG | 0.509314 | 6.1:-42845876 | None:intergenic |
| ATGAACCAATGCAGCTTGGT+TGG | 0.513222 | 6.1:-42842553 | None:intergenic |
| CTAATTACTCTGCCTTCATA+CGG | 0.517767 | 6.1:+42841862 | MS.gene021190:CDS |
| TGAGCACTGATTGAAAGCTT+AGG | 0.519082 | 6.1:-42843497 | None:intergenic |
| TCAATGGCTGCTTTAGAAGA+AGG | 0.521248 | 6.1:+42842741 | MS.gene021190:CDS |
| TTCTCAGTGACAGCTGAACC+TGG | 0.521769 | 6.1:-42844370 | None:intergenic |
| TATCGCATCAGATGTATTTG+TGG | 0.522179 | 6.1:+42845092 | MS.gene021190:CDS |
| CAACTTGGTTCCTTAGTGAC+CGG | 0.522231 | 6.1:+42842594 | MS.gene021190:CDS |
| TTTGGGTATGGAGGAGAAAG+GGG | 0.523161 | 6.1:+42844705 | MS.gene021190:CDS |
| AAAAGAGATTTCGGATCTTG+AGG | 0.523869 | 6.1:+42842500 | MS.gene021190:CDS |
| TTGCTTATGCACCAACTACA+AGG | 0.524207 | 6.1:+42843417 | MS.gene021190:CDS |
| ATCGCATCAGATGTATTTGT+GGG | 0.526168 | 6.1:+42845093 | MS.gene021190:CDS |
| CTTGAAATCCTACAATTGGA+TGG | 0.527185 | 6.1:+42844283 | MS.gene021190:CDS |
| CTCAGCTAATAGAACATCAA+GGG | 0.528051 | 6.1:-42842703 | None:intergenic |
| ATGTATTTGTGGGAAGGGAA+AGG | 0.531950 | 6.1:+42845103 | MS.gene021190:CDS |
| CAATGTCATCCCAAAAGGCT+TGG | 0.532254 | 6.1:-42845185 | None:intergenic |
| ACTAGCTCAGATGTATATGC+AGG | 0.540210 | 6.1:-42843125 | None:intergenic |
| ACGTGATTTGGAAGCAACAT+AGG | 0.541674 | 6.1:-42840773 | None:intergenic |
| GTAAGTGCTTGCTCAACAAA+TGG | 0.544583 | 6.1:-42843332 | None:intergenic |
| ATCAGATGTATTTGTGGGAA+GGG | 0.545019 | 6.1:+42845098 | MS.gene021190:CDS |
| TTCATCTACATTGTCGAAGG+CGG | 0.545535 | 6.1:-42846760 | None:intergenic |
| TGGTTCATGGTTTAGCAGAA+GGG | 0.546446 | 6.1:+42842568 | MS.gene021190:CDS |
| GACGAGATAAGTAACGACCT+TGG | 0.550631 | 6.1:-42845877 | None:intergenic |
| TACATTTGAGAATTCACAAG+TGG | 0.553060 | 6.1:-42844682 | None:intergenic |
| TTAGCAGAAGGGTGTCAACT+TGG | 0.553191 | 6.1:+42842579 | MS.gene021190:CDS |
| TACATCTGAGCTAGTAACTT+GGG | 0.556125 | 6.1:+42843133 | MS.gene021190:CDS |
| TGATGCGATAGTTGCCACTT+CGG | 0.556129 | 6.1:-42845079 | None:intergenic |
| TTCAGTTCACGCTGTTCCGG+AGG | 0.557140 | 6.1:-42844571 | None:intergenic |
| AACCATGAACCAATGCAGCT+TGG | 0.558664 | 6.1:-42842557 | None:intergenic |
| TTGATGCTGTTGCTGCTACA+GGG | 0.559432 | 6.1:+42845939 | MS.gene021190:CDS |
| AACCATTTCACAAGCAACAT+CGG | 0.560589 | 6.1:+42843073 | MS.gene021190:CDS |
| TTGATGACATTGGTTATGTG+TGG | 0.562795 | 6.1:-42846809 | None:intergenic |
| TCCAATTGTAGGATTTCAAG+TGG | 0.564153 | 6.1:-42844280 | None:intergenic |
| GGATCCGTTTCATCAAGCAT+TGG | 0.566699 | 6.1:+42840670 | MS.gene021190:CDS |
| CTGTTAATAAATGCAATGCC+AGG | 0.567179 | 6.1:+42844352 | MS.gene021190:CDS |
| CACTGATTGAAAGCTTAGGC+TGG | 0.568514 | 6.1:-42843493 | None:intergenic |
| TGATGACATTGGTTATGTGT+GGG | 0.569149 | 6.1:-42846808 | None:intergenic |
| CTGCGCGGCGTGTTGATGGT+TGG | 0.570497 | 6.1:-42842887 | None:intergenic |
| CATCAGATGTATTTGTGGGA+AGG | 0.572283 | 6.1:+42845097 | MS.gene021190:CDS |
| TTATGTGTGGGCTGATCCGG+TGG | 0.573476 | 6.1:-42846796 | None:intergenic |
| GTAGCATACTCACCGTATGA+AGG | 0.577759 | 6.1:-42841874 | None:intergenic |
| CACTAACTGTTGTGGACTCG+AGG | 0.581120 | 6.1:-42843016 | None:intergenic |
| GTGTCTTGCCAGAGGATGAG+TGG | 0.583067 | 6.1:+42846691 | MS.gene021190:intron |
| TGAAGGCCAAGAGGACCTAA+AGG | 0.583411 | 6.1:-42845216 | None:intergenic |
| CTAAAATGTTTAAGCAACAC+AGG | 0.586893 | 6.1:-42843308 | None:intergenic |
| TCAAATGTATTTGGGTATGG+AGG | 0.587560 | 6.1:+42844696 | MS.gene021190:CDS |
| GAAGATGCTTATAGTCCCAC+CGG | 0.590717 | 6.1:+42846780 | MS.gene021190:CDS |
| AGAAAGGGGAGAGACCTGAA+TGG | 0.592954 | 6.1:+42844719 | MS.gene021190:CDS |
| AATAAGAAGAAACAGGAGGT+AGG | 0.594442 | 6.1:-42843454 | None:intergenic |
| ACCTCCCGATGCAGCTATGG+AGG | 0.594498 | 6.1:-42843207 | None:intergenic |
| ATCTTCATCTACATTGTCGA+AGG | 0.597950 | 6.1:-42846763 | None:intergenic |
| GAACTCATCTTCACAGTAGA+CGG | 0.601442 | 6.1:+42844655 | MS.gene021190:CDS |
| TGACATAGAAATTGAACACC+TGG | 0.601939 | 6.1:-42844327 | None:intergenic |
| GATCCTCTTGGAGTCACGAA+TGG | 0.606168 | 6.1:-42840652 | None:intergenic |
| TATTTGGGTATGGAGGAGAA+AGG | 0.607896 | 6.1:+42844703 | MS.gene021190:CDS |
| AGATGAGCTGCTACCGCGTG+CGG | 0.610577 | 6.1:+42844480 | MS.gene021190:CDS |
| AGTAGTAATGTATGAGCTCG+AGG | 0.612329 | 6.1:-42842954 | None:intergenic |
| ACACAACAGATAGCATTGCT+AGG | 0.617403 | 6.1:+42844439 | MS.gene021190:CDS |
| TTGCTATAAAGATGTTAACT+GGG | 0.621722 | 6.1:+42846733 | MS.gene021190:CDS |
| TGCACTAGAAGGACTTCACC+AGG | 0.624068 | 6.1:+42844309 | MS.gene021190:CDS |
| TTACCATTCGTGACTCCAAG+AGG | 0.636630 | 6.1:+42840649 | MS.gene021190:CDS |
| TCTATTAGCTGAGAAAAGAG+TGG | 0.640906 | 6.1:+42842713 | MS.gene021190:CDS |
| GCCTCCATAGCTGCATCGGG+AGG | 0.642479 | 6.1:+42843206 | MS.gene021190:CDS |
| TATGTGTGGGCTGATCCGGT+GGG | 0.642837 | 6.1:-42846795 | None:intergenic |
| ATCACGTAGCATGAATGAGA+AGG | 0.643265 | 6.1:+42840789 | MS.gene021190:CDS |
| ACTGAGAATCTAGAAAGCAC+AGG | 0.644376 | 6.1:+42844385 | MS.gene021190:CDS |
| TGAATACAGTGTCTTGCCAG+AGG | 0.652440 | 6.1:+42846683 | MS.gene021190:intron |
| TCTACCTGTTGAAGGCCAAG+AGG | 0.664013 | 6.1:-42845225 | None:intergenic |
| TCAGACGATCAACTTCACGC+TGG | 0.677102 | 6.1:-42844603 | None:intergenic |
| CTAGAATAAGAAGAAACAGG+AGG | 0.679447 | 6.1:-42843458 | None:intergenic |
| GATAATTTGATAACCGCACG+CGG | 0.722729 | 6.1:-42844493 | None:intergenic |
| ATGGCAAAAGAAATTACACA+AGG | 0.725728 | 6.1:+42842771 | MS.gene021190:CDS |
| AGTGTATGCACTAACTGTTG+TGG | 0.728646 | 6.1:-42843024 | None:intergenic |
| CGGTTGATCGAATCTCTGCG+CGG | 0.781566 | 6.1:-42842902 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAATTTGTATAGAAA+TGG | + | chr6.1:42841183-42841202 | MS.gene021190:intron | 10.0% |
| !! | TTAAAAAATTTATTCTATGT+TGG | - | chr6.1:42844186-42844205 | None:intergenic | 10.0% |
| !!! | ATAAAATAGAGTTTTTAATA+GGG | - | chr6.1:42842322-42842341 | None:intergenic | 10.0% |
| !!! | TATAAAATAGAGTTTTTAAT+AGG | - | chr6.1:42842323-42842342 | None:intergenic | 10.0% |
| !!! | AAAAATTTGAATCATGTTTT+AGG | + | chr6.1:42843963-42843982 | MS.gene021190:intron | 15.0% |
| !!! | AACTATAGAGATTAATTTTT+TGG | + | chr6.1:42841080-42841099 | MS.gene021190:intron | 15.0% |
| !!! | TATTTTGTAGAAAAAATAAC+AGG | + | chr6.1:42845653-42845672 | MS.gene021190:intron | 15.0% |
| !!! | TCTATACAAATTTTATTTGT+GGG | - | chr6.1:42841181-42841200 | None:intergenic | 15.0% |
| !!! | TTCTATACAAATTTTATTTG+TGG | - | chr6.1:42841182-42841201 | None:intergenic | 15.0% |
| !!! | TTTATTTTTAATTGCAAAGT+TGG | - | chr6.1:42846560-42846579 | None:intergenic | 15.0% |
| !!! | TTTTTTCTTTTGCAATAAAT+CGG | + | chr6.1:42841042-42841061 | MS.gene021190:intron | 15.0% |
| !! | AAAAATACTTAGATATGTTC+TGG | + | chr6.1:42845630-42845649 | MS.gene021190:intron | 20.0% |
| !! | AGAAAAAAAAAACATGTTCA+TGG | - | chr6.1:42841030-42841049 | None:intergenic | 20.0% |
| !! | AGAATTGAAAGAAAAAATAG+TGG | - | chr6.1:42841461-42841480 | None:intergenic | 20.0% |
| !! | ATATATCCAATACAGAAAAA+TGG | + | chr6.1:42842661-42842680 | MS.gene021190:CDS | 20.0% |
| !! | CAAAAGAAAATTCAAAAGAA+AGG | - | chr6.1:42842002-42842021 | None:intergenic | 20.0% |
| !! | GATATAATATGAGAAGTAAA+TGG | + | chr6.1:42841414-42841433 | MS.gene021190:intron | 20.0% |
| !! | TAATCAAATGAAAGCAAAAA+GGG | - | chr6.1:42841721-42841740 | None:intergenic | 20.0% |
| !! | TATACAGGTATTACATAAAA+TGG | - | chr6.1:42844221-42844240 | None:intergenic | 20.0% |
| !! | TATCAAAAACATTATTGGAA+GGG | + | chr6.1:42845913-42845932 | MS.gene021190:CDS | 20.0% |
| !! | TTATCTTGTTGAACTTAAAA+AGG | + | chr6.1:42841806-42841825 | MS.gene021190:CDS | 20.0% |
| !! | TTATTCTAGTCAAAAAGTAA+AGG | + | chr6.1:42841352-42841371 | MS.gene021190:intron | 20.0% |
| !!! | AATTTTTCAGGTAAAAACAA+AGG | + | chr6.1:42844753-42844772 | MS.gene021190:intron | 20.0% |
| !!! | ACAAAACAACTATTTCTAAA+TGG | + | chr6.1:42845715-42845734 | MS.gene021190:intron | 20.0% |
| !!! | ATTAATTTTTTGGATTGGTT+AGG | + | chr6.1:42841090-42841109 | MS.gene021190:intron | 20.0% |
| !!! | GTAATTGAGGTTTTAAATAA+CGG | - | chr6.1:42842427-42842446 | None:intergenic | 20.0% |
| !!! | TAGAGATTAATTTTTTGGAT+TGG | + | chr6.1:42841085-42841104 | MS.gene021190:intron | 20.0% |
| !!! | TTCAATTCTTTTCAAATTTG+TGG | - | chr6.1:42843357-42843376 | None:intergenic | 20.0% |
| !!! | TTTAACATTGCTACATTTTA+AGG | + | chr6.1:42841138-42841157 | MS.gene021190:intron | 20.0% |
| !!! | TTTTTCTTTTGCAATAAATC+GGG | + | chr6.1:42841043-42841062 | MS.gene021190:intron | 20.0% |
| ! | AAACTAGAATAAGAAGAAAC+AGG | - | chr6.1:42843464-42843483 | None:intergenic | 25.0% |
| ! | AAATTATCACATAGCACAAA+AGG | + | chr6.1:42844508-42844527 | MS.gene021190:CDS | 25.0% |
| ! | AAGCAGTATAAAACAATGAT+TGG | - | chr6.1:42846641-42846660 | None:intergenic | 25.0% |
| ! | AATACAGAAAAATGGCTAAT+AGG | + | chr6.1:42842669-42842688 | MS.gene021190:CDS | 25.0% |
| ! | AATAGACAGATTTGATTCTT+TGG | - | chr6.1:42843936-42843955 | None:intergenic | 25.0% |
| ! | AATTAACATGATTGTAATCC+AGG | + | chr6.1:42842151-42842170 | MS.gene021190:intron | 25.0% |
| ! | AGATTCATCTCTCATATATT+AGG | + | chr6.1:42843900-42843919 | MS.gene021190:intron | 25.0% |
| ! | AGGTATTACATAAAATGGAA+AGG | - | chr6.1:42844216-42844235 | None:intergenic | 25.0% |
| ! | ATAGAATCAGAAATTCAACA+AGG | + | chr6.1:42844143-42844162 | MS.gene021190:intron | 25.0% |
| ! | ATGACCTCAAATTGATAAAA+GGG | + | chr6.1:42840877-42840896 | MS.gene021190:intron | 25.0% |
| ! | ATGTACTGTTATAATATTGC+AGG | - | chr6.1:42842479-42842498 | None:intergenic | 25.0% |
| ! | ATTCATATTGCATTGTTTAC+AGG | + | chr6.1:42841764-42841783 | MS.gene021190:intron | 25.0% |
| ! | ATTGCTATAAAGATGTTAAC+TGG | + | chr6.1:42846732-42846751 | MS.gene021190:CDS | 25.0% |
| ! | CAAGCTATCAAAAACATTAT+TGG | + | chr6.1:42845908-42845927 | MS.gene021190:CDS | 25.0% |
| ! | CTAATCAAATGAAAGCAAAA+AGG | - | chr6.1:42841722-42841741 | None:intergenic | 25.0% |
| ! | CTATCAAAAACATTATTGGA+AGG | + | chr6.1:42845912-42845931 | MS.gene021190:CDS | 25.0% |
| ! | CTGCATATTATCATAAATAG+AGG | + | chr6.1:42844099-42844118 | MS.gene021190:intron | 25.0% |
| ! | GGTAATAATTTGATAGACAT+TGG | + | chr6.1:42844967-42844986 | MS.gene021190:intron | 25.0% |
| ! | GGTATTACATAAAATGGAAA+GGG | - | chr6.1:42844215-42844234 | None:intergenic | 25.0% |
| ! | GTATTAAAGAATTCTGTTTG+AGG | - | chr6.1:42845697-42845716 | None:intergenic | 25.0% |
| ! | GTATTACATAAAATGGAAAG+GGG | - | chr6.1:42844214-42844233 | None:intergenic | 25.0% |
| ! | GTGAATTCTCAAATGTATTT+GGG | + | chr6.1:42844688-42844707 | MS.gene021190:CDS | 25.0% |
| ! | TATATCCTTTGTGTGAATAT+AGG | + | chr6.1:42844237-42844256 | MS.gene021190:intron | 25.0% |
| ! | TATGATAATATGCAGAAACA+GGG | - | chr6.1:42844094-42844113 | None:intergenic | 25.0% |
| ! | TATTATTATTATGGAGTGCA+TGG | - | chr6.1:42843634-42843653 | None:intergenic | 25.0% |
| ! | TATTTAACTCTGGATTACTA+GGG | + | chr6.1:42840959-42840978 | MS.gene021190:intron | 25.0% |
| ! | TCAAAAGAAAGGTCATAAAA+CGG | - | chr6.1:42841991-42842010 | None:intergenic | 25.0% |
| ! | TGTGAATTCTCAAATGTATT+TGG | + | chr6.1:42844687-42844706 | MS.gene021190:CDS | 25.0% |
| ! | TTACATAACCTTGGATATAA+TGG | + | chr6.1:42842066-42842085 | MS.gene021190:intron | 25.0% |
| ! | TTATGATAATATGCAGAAAC+AGG | - | chr6.1:42844095-42844114 | None:intergenic | 25.0% |
| ! | TTATTTAACTCTGGATTACT+AGG | + | chr6.1:42840958-42840977 | MS.gene021190:intron | 25.0% |
| ! | TTCTTATGCATCATATATGA+AGG | + | chr6.1:42841906-42841925 | MS.gene021190:intron | 25.0% |
| ! | TTGCTATAAAGATGTTAACT+GGG | + | chr6.1:42846733-42846752 | MS.gene021190:CDS | 25.0% |
| ! | TTTAGAAGAAGGACAAAAAA+TGG | + | chr6.1:42842752-42842771 | MS.gene021190:CDS | 25.0% |
| ! | TTTGTAAAGAAAATCATGTC+TGG | + | chr6.1:42846493-42846512 | MS.gene021190:intron | 25.0% |
| !! | ATGATTTAAGTTTGCAATCT+TGG | - | chr6.1:42842299-42842318 | None:intergenic | 25.0% |
| !! | TCAAGATTTTTACATAACCT+TGG | + | chr6.1:42842057-42842076 | MS.gene021190:intron | 25.0% |
| !! | TCTGAAAGAATACTTTTGAA+CGG | + | chr6.1:42845322-42845341 | MS.gene021190:intron | 25.0% |
| !! | TTTTATATGTCTACCATATG+TGG | + | chr6.1:42841382-42841401 | MS.gene021190:intron | 25.0% |
| !!! | AACATCGAAAATGTTGTTTT+CGG | + | chr6.1:42845539-42845558 | MS.gene021190:intron | 25.0% |
| !!! | TAGTTGTTTTCAAAATGTTG+TGG | + | chr6.1:42841318-42841337 | MS.gene021190:intron | 25.0% |
| !!! | TATTAGCCATTTTTCTGTAT+TGG | - | chr6.1:42842670-42842689 | None:intergenic | 25.0% |
| !!! | TATTTTGAAAACAGAAGACA+AGG | + | chr6.1:42846522-42846541 | MS.gene021190:intron | 25.0% |
| AAACTCTCAATCTCAATTGT+CGG | - | chr6.1:42843687-42843706 | None:intergenic | 30.0% | |
| AAATGGTTGAAAAAACAAGG+TGG | - | chr6.1:42843061-42843080 | None:intergenic | 30.0% | |
| AACACTTGAGCATTAAAACA+AGG | + | chr6.1:42845461-42845480 | MS.gene021190:intron | 30.0% | |
| AATGGTTGAAAAAACAAGGT+GGG | - | chr6.1:42843060-42843079 | None:intergenic | 30.0% | |
| ACAAAACCAGTTTAATTCTC+AGG | - | chr6.1:42841566-42841585 | None:intergenic | 30.0% | |
| ACTACAAGGAAAAGTAATAC+TGG | + | chr6.1:42843431-42843450 | MS.gene021190:CDS | 30.0% | |
| AGAATAACGATGAAATTCTG+TGG | + | chr6.1:42845597-42845616 | MS.gene021190:intron | 30.0% | |
| AGTAATTCTCTACAATGTCA+TGG | - | chr6.1:42842202-42842221 | None:intergenic | 30.0% | |
| AGTCAAAAAGTAAAGGTTGA+AGG | + | chr6.1:42841359-42841378 | MS.gene021190:intron | 30.0% | |
| AGTTTGATCCATTATATCCA+AGG | - | chr6.1:42842077-42842096 | None:intergenic | 30.0% | |
| ATCAGATAAACAAAAACCTC+CGG | + | chr6.1:42844555-42844574 | MS.gene021190:CDS | 30.0% | |
| ATGGCAAAAGAAATTACACA+AGG | + | chr6.1:42842771-42842790 | MS.gene021190:CDS | 30.0% | |
| CAATTCCTATATGATTGTTC+AGG | + | chr6.1:42845038-42845057 | MS.gene021190:intron | 30.0% | |
| CAGTACATCAAAAGAGATTT+CGG | + | chr6.1:42842491-42842510 | MS.gene021190:intron | 30.0% | |
| CATGACCTCAAATTGATAAA+AGG | + | chr6.1:42840876-42840895 | MS.gene021190:intron | 30.0% | |
| CTAAAATGTTTAAGCAACAC+AGG | - | chr6.1:42843311-42843330 | None:intergenic | 30.0% | |
| CTAACATGTTTCAGACAATA+AGG | + | chr6.1:42845010-42845029 | MS.gene021190:intron | 30.0% | |
| CTTAAAATAGCATGTGTAGA+TGG | + | chr6.1:42845992-42846011 | MS.gene021190:intron | 30.0% | |
| GTGAAATGGTTGAAAAAACA+AGG | - | chr6.1:42843064-42843083 | None:intergenic | 30.0% | |
| GTTGTAGATATTCATCTCAA+TGG | + | chr6.1:42841505-42841524 | MS.gene021190:intron | 30.0% | |
| TACATATATACGTACCTGTT+GGG | - | chr6.1:42845971-42845990 | None:intergenic | 30.0% | |
| TACATTTGAGAATTCACAAG+TGG | - | chr6.1:42844685-42844704 | None:intergenic | 30.0% | |
| TAGATATTCATCTCAATGGA+AGG | + | chr6.1:42841509-42841528 | MS.gene021190:intron | 30.0% | |
| TATCTAACATCTACCACATA+TGG | - | chr6.1:42841398-42841417 | None:intergenic | 30.0% | |
| TATTCACACAAAGGATATAC+AGG | - | chr6.1:42844236-42844255 | None:intergenic | 30.0% | |
| TCATATCAACTAGCAGTATT+AGG | + | chr6.1:42844001-42844020 | MS.gene021190:intron | 30.0% | |
| TGTCTTCTTATTCAATGTGT+TGG | + | chr6.1:42841672-42841691 | MS.gene021190:intron | 30.0% | |
| TTACAGAAACAGTGATACTA+TGG | + | chr6.1:42845151-42845170 | MS.gene021190:CDS | 30.0% | |
| TTCTCAAATGTATTTGGGTA+TGG | + | chr6.1:42844693-42844712 | MS.gene021190:CDS | 30.0% | |
| TTCTCGTATATGACAACAAT+AGG | - | chr6.1:42841245-42841264 | None:intergenic | 30.0% | |
| ! | AAACTGAAGTTTTCGTTGTT+TGG | - | chr6.1:42841297-42841316 | None:intergenic | 30.0% |
| ! | AACATTGTACGAACGATTTT+TGG | + | chr6.1:42840928-42840947 | MS.gene021190:intron | 30.0% |
| ! | ACATGTGACTTTAGAAACTA+CGG | - | chr6.1:42845269-42845288 | None:intergenic | 30.0% |
| ! | ATAATTTGTGCAGCTCTATT+TGG | + | chr6.1:42845826-42845845 | MS.gene021190:intron | 30.0% |
| ! | CGTTAGCATTGAAAAATCTT+GGG | + | chr6.1:42842925-42842944 | MS.gene021190:CDS | 30.0% |
| ! | CTGAAAGAATACTTTTGAAC+GGG | + | chr6.1:42845323-42845342 | MS.gene021190:intron | 30.0% |
| ! | GTAATGATATTTTCATCCCA+AGG | + | chr6.1:42845860-42845879 | MS.gene021190:CDS | 30.0% |
| ! | GTTAGCATTGAAAAATCTTG+GGG | + | chr6.1:42842926-42842945 | MS.gene021190:CDS | 30.0% |
| ! | TAGACCCTTTTATCAATTTG+AGG | - | chr6.1:42840884-42840903 | None:intergenic | 30.0% |
| ! | TTGTTCAGGAGCTTTTTATA+AGG | + | chr6.1:42845052-42845071 | MS.gene021190:intron | 30.0% |
| ! | TTTAAGTTTGCAATCTTGGT+CGG | - | chr6.1:42842295-42842314 | None:intergenic | 30.0% |
| ! | TTTTCTTAATGTTAACCCTC+CGG | - | chr6.1:42841002-42841021 | None:intergenic | 30.0% |
| ! | TTTTTGTCTGTGTTCAGTAA+TGG | - | chr6.1:42842838-42842857 | None:intergenic | 30.0% |
| !! | AAGATTTTTCAATGCTAACG+CGG | - | chr6.1:42842925-42842944 | None:intergenic | 30.0% |
| !! | CTTTTATCAATTTGAGGTCA+TGG | - | chr6.1:42840878-42840897 | None:intergenic | 30.0% |
| !! | GATAGACATTGGTAATGATT+TGG | + | chr6.1:42844978-42844997 | MS.gene021190:intron | 30.0% |
| !! | GTATTACTTTTCCTTGTAGT+TGG | - | chr6.1:42843431-42843450 | None:intergenic | 30.0% |
| !! | GTGAGTCTGATATTACTTTT+TGG | - | chr6.1:42845800-42845819 | None:intergenic | 30.0% |
| !! | TTTTAACTACCAATCCACAT+TGG | - | chr6.1:42846033-42846052 | None:intergenic | 30.0% |
| !!! | TGATATTACTTTTTGGTGAG+TGG | - | chr6.1:42845793-42845812 | None:intergenic | 30.0% |
| !!! | TGGCTTAATGCATTGTTTTT+TGG | + | chr6.1:42845429-42845448 | MS.gene021190:intron | 30.0% |
| AAAAGAGATTTCGGATCTTG+AGG | + | chr6.1:42842500-42842519 | MS.gene021190:CDS | 35.0% | |
| AAACCACTGTCTTAACTGTA+AGG | - | chr6.1:42846122-42846141 | None:intergenic | 35.0% | |
| AAAGAGATTTCGGATCTTGA+GGG | + | chr6.1:42842501-42842520 | MS.gene021190:CDS | 35.0% | |
| AACCATTTCACAAGCAACAT+CGG | + | chr6.1:42843073-42843092 | MS.gene021190:CDS | 35.0% | |
| AAGCTCCTATATTCACACAA+AGG | - | chr6.1:42844245-42844264 | None:intergenic | 35.0% | |
| AAGCTCCTGAACAATCATAT+AGG | - | chr6.1:42845046-42845065 | None:intergenic | 35.0% | |
| AAGGATGTTTCATGCTTTCT+TGG | + | chr6.1:42844772-42844791 | MS.gene021190:intron | 35.0% | |
| AATAAGAAGAAACAGGAGGT+AGG | - | chr6.1:42843457-42843476 | None:intergenic | 35.0% | |
| ACAGACACAAATATCAGACA+CGG | - | chr6.1:42843798-42843817 | None:intergenic | 35.0% | |
| ACCAGTTTAATTCTCAGGAA+TGG | - | chr6.1:42841561-42841580 | None:intergenic | 35.0% | |
| ACTTCCAATGCTTGATGAAA+CGG | - | chr6.1:42840677-42840696 | None:intergenic | 35.0% | |
| AGAAGACAAGGTACAAACAA+TGG | + | chr6.1:42846534-42846553 | MS.gene021190:intron | 35.0% | |
| AGCAATAGAAGACGTAATTG+AGG | - | chr6.1:42842440-42842459 | None:intergenic | 35.0% | |
| AGCATTAAAACAAGGTAGTG+AGG | + | chr6.1:42845469-42845488 | MS.gene021190:intron | 35.0% | |
| AGGATGTTTCATGCTTTCTT+GGG | + | chr6.1:42844773-42844792 | MS.gene021190:intron | 35.0% | |
| ATACATCTGAGCTAGTAACT+TGG | + | chr6.1:42843132-42843151 | MS.gene021190:CDS | 35.0% | |
| ATCAGATGTATTTGTGGGAA+GGG | + | chr6.1:42845098-42845117 | MS.gene021190:CDS | 35.0% | |
| ATCATAAATAGAGGTGAGTG+TGG | + | chr6.1:42844108-42844127 | MS.gene021190:intron | 35.0% | |
| ATCGCATCAGATGTATTTGT+GGG | + | chr6.1:42845093-42845112 | MS.gene021190:CDS | 35.0% | |
| ATCTTCATCTACATTGTCGA+AGG | - | chr6.1:42846766-42846785 | None:intergenic | 35.0% | |
| ATGCAAACAATTGTGAAACC+AGG | - | chr6.1:42843593-42843612 | None:intergenic | 35.0% | |
| CAAATTCAACTCAATGGTTC+AGG | + | chr6.1:42843520-42843539 | MS.gene021190:CDS | 35.0% | |
| CAGCTATAATCATGCATGTT+TGG | + | chr6.1:42846380-42846399 | MS.gene021190:intron | 35.0% | |
| CAGTTTAATTCTCAGGAATG+GGG | - | chr6.1:42841559-42841578 | None:intergenic | 35.0% | |
| CCAGTTTAATTCTCAGGAAT+GGG | - | chr6.1:42841560-42841579 | None:intergenic | 35.0% | |
| CTAATTACTCTGCCTTCATA+CGG | + | chr6.1:42841862-42841881 | MS.gene021190:CDS | 35.0% | |
| CTACATATATACGTACCTGT+TGG | - | chr6.1:42845972-42845991 | None:intergenic | 35.0% | |
| CTAGAATAAGAAGAAACAGG+AGG | - | chr6.1:42843461-42843480 | None:intergenic | 35.0% | |
| CTCAGCTAATAGAACATCAA+GGG | - | chr6.1:42842706-42842725 | None:intergenic | 35.0% | |
| CTCAGTCATTATTGTCTTAC+TGG | - | chr6.1:42846260-42846279 | None:intergenic | 35.0% | |
| CTGTTAATAAATGCAATGCC+AGG | + | chr6.1:42844352-42844371 | MS.gene021190:CDS | 35.0% | |
| CTTGAAATCCTACAATTGGA+TGG | + | chr6.1:42844283-42844302 | MS.gene021190:CDS | 35.0% | |
| GAAAAGAGTGGAAGAATCAA+TGG | + | chr6.1:42842725-42842744 | MS.gene021190:CDS | 35.0% | |
| GGAGGGTTAACATTAAGAAA+AGG | + | chr6.1:42841001-42841020 | MS.gene021190:intron | 35.0% | |
| GTTGGATAAAAGGTTTCTCA+TGG | - | chr6.1:42842538-42842557 | None:intergenic | 35.0% | |
| TACATCTGAGCTAGTAACTT+GGG | + | chr6.1:42843133-42843152 | MS.gene021190:CDS | 35.0% | |
| TATACGAGAAGAGATTGTTG+CGG | + | chr6.1:42841255-42841274 | MS.gene021190:intron | 35.0% | |
| TATCGCATCAGATGTATTTG+TGG | + | chr6.1:42845092-42845111 | MS.gene021190:CDS | 35.0% | |
| TATGTCTGAATCTTCGTTTC+CGG | - | chr6.1:42842616-42842635 | None:intergenic | 35.0% | |
| TCAAATGTATTTGGGTATGG+AGG | + | chr6.1:42844696-42844715 | MS.gene021190:CDS | 35.0% | |
| TCCAATTGTAGGATTTCAAG+TGG | - | chr6.1:42844283-42844302 | None:intergenic | 35.0% | |
| TCCACTTGAAATCCTACAAT+TGG | + | chr6.1:42844279-42844298 | MS.gene021190:CDS | 35.0% | |
| TCTATTAGCTGAGAAAAGAG+TGG | + | chr6.1:42842713-42842732 | MS.gene021190:CDS | 35.0% | |
| TCTCAGCTAATAGAACATCA+AGG | - | chr6.1:42842707-42842726 | None:intergenic | 35.0% | |
| TCTTAACTGTAAGGATGAGA+AGG | - | chr6.1:42846113-42846132 | None:intergenic | 35.0% | |
| TGACATAGAAATTGAACACC+TGG | - | chr6.1:42844330-42844349 | None:intergenic | 35.0% | |
| TGCAAACAATTGTGAAACCA+GGG | - | chr6.1:42843592-42843611 | None:intergenic | 35.0% | |
| TGCTCACAAATTCAACTCAA+TGG | + | chr6.1:42843514-42843533 | MS.gene021190:CDS | 35.0% | |
| TGTATCAGTTGAGATTGCTA+TGG | + | chr6.1:42842239-42842258 | MS.gene021190:intron | 35.0% | |
| TTAAGTTTGCAATCTTGGTC+GGG | - | chr6.1:42842294-42842313 | None:intergenic | 35.0% | |
| TTGAACGTAACTACATGTGT+TGG | - | chr6.1:42843730-42843749 | None:intergenic | 35.0% | |
| TTTACCTGAAAAATTCCCGA+AGG | - | chr6.1:42844748-42844767 | None:intergenic | 35.0% | |
| TTTCGCTTCTCCTTAAGAAA+CGG | + | chr6.1:42843177-42843196 | MS.gene021190:CDS | 35.0% | |
| ! | ACGACTAAGGTGTTACATTA+TGG | + | chr6.1:42842379-42842398 | MS.gene021190:intron | 35.0% |
| ! | AGGTGTTACATTATGGACTA+TGG | + | chr6.1:42842386-42842405 | MS.gene021190:intron | 35.0% |
| ! | CATGTGACTTTAGAAACTAC+GGG | - | chr6.1:42845268-42845287 | None:intergenic | 35.0% |
| ! | GATAAGCTTAGGGTTTTCAA+AGG | + | chr6.1:42840730-42840749 | MS.gene021190:CDS | 35.0% |
| ! | GATTCTTTGACAGTTTTTGC+AGG | + | chr6.1:42843095-42843114 | MS.gene021190:CDS | 35.0% |
| ! | GCGTTAGCATTGAAAAATCT+TGG | + | chr6.1:42842924-42842943 | MS.gene021190:CDS | 35.0% |
| ! | GGTCAGACTTTATTTAACTC+TGG | + | chr6.1:42840949-42840968 | MS.gene021190:intron | 35.0% |
| ! | GTAATCCAGGTTTTCAATAG+TGG | + | chr6.1:42842164-42842183 | MS.gene021190:intron | 35.0% |
| ! | TACACACTGTCATCTTTTAG+AGG | + | chr6.1:42843265-42843284 | MS.gene021190:CDS | 35.0% |
| ! | TGAAGTGCTTGAAACAAACT+TGG | - | chr6.1:42842810-42842829 | None:intergenic | 35.0% |
| ! | TTTTATAAGGCTTACCGAAG+TGG | + | chr6.1:42845065-42845084 | MS.gene021190:CDS | 35.0% |
| !! | AGACATTGGTAATGATTTGG+TGG | + | chr6.1:42844981-42845000 | MS.gene021190:intron | 35.0% |
| !!! | TGAGGTTACTTTTAGAAGTC+AGG | - | chr6.1:42845679-42845698 | None:intergenic | 35.0% |
| AAGTTGTTGACAAGCGAACA+TGG | + | chr6.1:42845570-42845589 | MS.gene021190:intron | 40.0% | |
| ACAACGAGATGTTCACAGAA+TGG | - | chr6.1:42841945-42841964 | None:intergenic | 40.0% | |
| ACACAACAGATAGCATTGCT+AGG | + | chr6.1:42844439-42844458 | MS.gene021190:CDS | 40.0% | |
| ACCTAGAGGAAAATAGGCTT+GGG | - | chr6.1:42843845-42843864 | None:intergenic | 40.0% | |
| ACGAGATAAGTAACGACCTT+GGG | - | chr6.1:42845879-42845898 | None:intergenic | 40.0% | |
| ACTAGCTCAGATGTATATGC+AGG | - | chr6.1:42843128-42843147 | None:intergenic | 40.0% | |
| ACTGTAAGGATGAGAAGGAT+CGG | - | chr6.1:42846108-42846127 | None:intergenic | 40.0% | |
| AGCATGTGTAGATGGCAAAT+TGG | + | chr6.1:42846000-42846019 | MS.gene021190:intron | 40.0% | |
| AGTAACACTCTACCTGTTGA+AGG | - | chr6.1:42845236-42845255 | None:intergenic | 40.0% | |
| AGTAGTAATGTATGAGCTCG+AGG | - | chr6.1:42842957-42842976 | None:intergenic | 40.0% | |
| AGTGTATGCACTAACTGTTG+TGG | - | chr6.1:42843027-42843046 | None:intergenic | 40.0% | |
| ATCACGTAGCATGAATGAGA+AGG | + | chr6.1:42840789-42840808 | MS.gene021190:CDS | 40.0% | |
| ATGCAGCTTGGTTGGATAAA+AGG | - | chr6.1:42842548-42842567 | None:intergenic | 40.0% | |
| ATGTATTTGTGGGAAGGGAA+AGG | + | chr6.1:42845103-42845122 | MS.gene021190:CDS | 40.0% | |
| ATTTGGGTATGGAGGAGAAA+GGG | + | chr6.1:42844704-42844723 | MS.gene021190:CDS | 40.0% | |
| CAATGTGTTGGACAGTGTTA+TGG | + | chr6.1:42841684-42841703 | MS.gene021190:intron | 40.0% | |
| CACTCTCAGTGATAAGCTTA+GGG | + | chr6.1:42840720-42840739 | MS.gene021190:CDS | 40.0% | |
| CATCAGATGTATTTGTGGGA+AGG | + | chr6.1:42845097-42845116 | MS.gene021190:CDS | 40.0% | |
| CATCCTTACAGTTAAGACAG+TGG | + | chr6.1:42846116-42846135 | MS.gene021190:intron | 40.0% | |
| CATGACCACTATTGAAAACC+TGG | - | chr6.1:42842172-42842191 | None:intergenic | 40.0% | |
| CCCATTCCTGAGAATTAAAC+TGG | + | chr6.1:42841557-42841576 | MS.gene021190:intron | 40.0% | |
| CTCATTCATGCTACGTGATT+TGG | - | chr6.1:42840788-42840807 | None:intergenic | 40.0% | |
| CTTATCACTGAGAGTGAGAT+TGG | - | chr6.1:42840716-42840735 | None:intergenic | 40.0% | |
| GAAACAGGGTTTCAAATTGC+AGG | - | chr6.1:42844080-42844099 | None:intergenic | 40.0% | |
| GAACTCATCTTCACAGTAGA+CGG | + | chr6.1:42844655-42844674 | MS.gene021190:CDS | 40.0% | |
| GACATTGAACGAACTCCTTT+AGG | + | chr6.1:42845201-42845220 | MS.gene021190:CDS | 40.0% | |
| GCATTGAAAAATCTTGGGGA+CGG | + | chr6.1:42842930-42842949 | MS.gene021190:CDS | 40.0% | |
| GGAACGTTCTAATACGACTA+AGG | + | chr6.1:42842366-42842385 | MS.gene021190:intron | 40.0% | |
| GGAATGGGGATAACTTAACT+AGG | - | chr6.1:42841545-42841564 | None:intergenic | 40.0% | |
| GTAAGTGCTTGCTCAACAAA+TGG | - | chr6.1:42843335-42843354 | None:intergenic | 40.0% | |
| GTAGAGTGGATCAACTTGAT+AGG | - | chr6.1:42846350-42846369 | None:intergenic | 40.0% | |
| GTTGGTATCATGTCAGATAC+AGG | - | chr6.1:42843712-42843731 | None:intergenic | 40.0% | |
| TAGCAGTATTAGGCCTAATG+CGG | + | chr6.1:42844011-42844030 | MS.gene021190:intron | 40.0% | |
| TATTATGGAGTGCATGGCAA+TGG | - | chr6.1:42843628-42843647 | None:intergenic | 40.0% | |
| TATTTGGGTATGGAGGAGAA+AGG | + | chr6.1:42844703-42844722 | MS.gene021190:CDS | 40.0% | |
| TCAACTTGATAGGTGGTCTA+TGG | - | chr6.1:42846340-42846359 | None:intergenic | 40.0% | |
| TCACTCTCAGTGATAAGCTT+AGG | + | chr6.1:42840719-42840738 | MS.gene021190:CDS | 40.0% | |
| TCGTTCAATGTCATCCCAAA+AGG | - | chr6.1:42845193-42845212 | None:intergenic | 40.0% | |
| TGACTGAGCTTCTACTTCTA+AGG | + | chr6.1:42846272-42846291 | MS.gene021190:intron | 40.0% | |
| TGCAATAAATCGGGCTATGT+TGG | + | chr6.1:42841052-42841071 | MS.gene021190:intron | 40.0% | |
| TGGTTCATGGTTTAGCAGAA+GGG | + | chr6.1:42842568-42842587 | MS.gene021190:CDS | 40.0% | |
| TGTAGATGGCAAATTGGTAG+CGG | + | chr6.1:42846006-42846025 | MS.gene021190:intron | 40.0% | |
| TTCATCTACATTGTCGAAGG+CGG | - | chr6.1:42846763-42846782 | None:intergenic | 40.0% | |
| TTGCTTATGCACCAACTACA+AGG | + | chr6.1:42843417-42843436 | MS.gene021190:CDS | 40.0% | |
| TTGGAAGCAACATAGGCATT+GGG | - | chr6.1:42840769-42840788 | None:intergenic | 40.0% | |
| TTGGTTCATGGTTTAGCAGA+AGG | + | chr6.1:42842567-42842586 | MS.gene021190:CDS | 40.0% | |
| TTTATCCAACCAAGCTGCAT+TGG | + | chr6.1:42842548-42842567 | MS.gene021190:CDS | 40.0% | |
| TTTCCAGAGTCGTTTGATTG+TGG | + | chr6.1:42845409-42845428 | MS.gene021190:intron | 40.0% | |
| TTTGGAAGCAACATAGGCAT+TGG | - | chr6.1:42840770-42840789 | None:intergenic | 40.0% | |
| ! | AAGCCTATTTTCCTCTAGGT+GGG | + | chr6.1:42843845-42843864 | MS.gene021190:intron | 40.0% |
| ! | ACGTGATTTGGAAGCAACAT+AGG | - | chr6.1:42840776-42840795 | None:intergenic | 40.0% |
| ! | ACTGAGAATCTAGAAAGCAC+AGG | + | chr6.1:42844385-42844404 | MS.gene021190:CDS | 40.0% |
| ! | ATCCGATGTTGCTTGTGAAA+TGG | - | chr6.1:42843078-42843097 | None:intergenic | 40.0% |
| ! | CTTTAGCTTCTGCTGATGAT+TGG | + | chr6.1:42843390-42843409 | MS.gene021190:CDS | 40.0% |
| ! | GATAATTTGATAACCGCACG+CGG | - | chr6.1:42844496-42844515 | None:intergenic | 40.0% |
| ! | GTCGGTTCAACCAAAAACAA+GGG | + | chr6.1:42846149-42846168 | MS.gene021190:intron | 40.0% |
| ! | GTTTCCTTCGGGAATTTTTC+AGG | + | chr6.1:42844741-42844760 | MS.gene021190:CDS | 40.0% |
| ! | TATTTTCCTCTAGGTGGGAT+GGG | + | chr6.1:42843850-42843869 | MS.gene021190:intron | 40.0% |
| ! | TTCTGATGACCAAGCCTTTT+GGG | + | chr6.1:42845176-42845195 | MS.gene021190:CDS | 40.0% |
| ! | TTTCTGATGACCAAGCCTTT+TGG | + | chr6.1:42845175-42845194 | MS.gene021190:CDS | 40.0% |
| !! | TCAATGGCTGCTTTAGAAGA+AGG | + | chr6.1:42842741-42842760 | MS.gene021190:CDS | 40.0% |
| !! | TCTTTTAGAGGCTAGTGGAA+TGG | + | chr6.1:42843277-42843296 | MS.gene021190:CDS | 40.0% |
| !! | TGAGCACTGATTGAAAGCTT+AGG | - | chr6.1:42843500-42843519 | None:intergenic | 40.0% |
| !! | TGTCATCTTTTAGAGGCTAG+TGG | + | chr6.1:42843272-42843291 | MS.gene021190:CDS | 40.0% |
| !! | TGTCGGTTCAACCAAAAACA+AGG | + | chr6.1:42846148-42846167 | MS.gene021190:intron | 40.0% |
| !!! | CGTTCGTTTTCCCTTGTTTT+TGG | - | chr6.1:42846162-42846181 | None:intergenic | 40.0% |
| AACCATGAACCAATGCAGCT+TGG | - | chr6.1:42842560-42842579 | None:intergenic | 45.0% | |
| AAGCCACAATCAAACGACTC+TGG | - | chr6.1:42845415-42845434 | None:intergenic | 45.0% | |
| AGACCTGAATGGTTTCCTTC+GGG | + | chr6.1:42844730-42844749 | MS.gene021190:CDS | 45.0% | |
| AGGCGAGAATCCGTTTCTTA+AGG | - | chr6.1:42843190-42843209 | None:intergenic | 45.0% | |
| ATCTTCGTTTCCGGTCACTA+AGG | - | chr6.1:42842607-42842626 | None:intergenic | 45.0% | |
| ATGAACCAATGCAGCTTGGT+TGG | - | chr6.1:42842556-42842575 | None:intergenic | 45.0% | |
| ATTCCCGAAGGAAACCATTC+AGG | - | chr6.1:42844736-42844755 | None:intergenic | 45.0% | |
| ATTGATGCTGTTGCTGCTAC+AGG | + | chr6.1:42845938-42845957 | MS.gene021190:CDS | 45.0% | |
| CAACTTGGTTCCTTAGTGAC+CGG | + | chr6.1:42842594-42842613 | MS.gene021190:CDS | 45.0% | |
| CAATGTCATCCCAAAAGGCT+TGG | - | chr6.1:42845188-42845207 | None:intergenic | 45.0% | |
| CACCTAGAGGAAAATAGGCT+TGG | - | chr6.1:42843846-42843865 | None:intergenic | 45.0% | |
| CATCCCACCTAGAGGAAAAT+AGG | - | chr6.1:42843851-42843870 | None:intergenic | 45.0% | |
| CATGATCGGCCACAATACTA+TGG | - | chr6.1:42844049-42844068 | None:intergenic | 45.0% | |
| CGGACACAACCATAGTATTG+TGG | + | chr6.1:42844037-42844056 | MS.gene021190:intron | 45.0% | |
| CGTAGCATGAATGAGAAGGT+CGG | + | chr6.1:42840793-42840812 | MS.gene021190:intron | 45.0% | |
| CGTTCGTACAATGTTCATCG+AGG | - | chr6.1:42840923-42840942 | None:intergenic | 45.0% | |
| CTTGATGAAACGGATCCTCT+TGG | - | chr6.1:42840667-42840686 | None:intergenic | 45.0% | |
| GAAACCAGGGCAAAAAAGTG+AGG | - | chr6.1:42843579-42843598 | None:intergenic | 45.0% | |
| GAAGATGCTTATAGTCCCAC+CGG | + | chr6.1:42846780-42846799 | MS.gene021190:CDS | 45.0% | |
| GACAGTGGTTTGATCAGTGT+CGG | + | chr6.1:42846131-42846150 | MS.gene021190:intron | 45.0% | |
| GACGAGATAAGTAACGACCT+TGG | - | chr6.1:42845880-42845899 | None:intergenic | 45.0% | |
| GAGACCTGAATGGTTTCCTT+CGG | + | chr6.1:42844729-42844748 | MS.gene021190:CDS | 45.0% | |
| GAGTGGATCAACTTGATAGG+TGG | - | chr6.1:42846347-42846366 | None:intergenic | 45.0% | |
| GCATGATTATAGCTGCATGC+AGG | - | chr6.1:42846375-42846394 | None:intergenic | 45.0% | |
| GGATCCGTTTCATCAAGCAT+TGG | + | chr6.1:42840670-42840689 | MS.gene021190:CDS | 45.0% | |
| GTACTTGTGAACTCGTGTCA+GGG | + | chr6.1:42845373-42845392 | MS.gene021190:intron | 45.0% | |
| GTAGCATACTCACCGTATGA+AGG | - | chr6.1:42841877-42841896 | None:intergenic | 45.0% | |
| GTGCAAGTCCATCCAATTGT+AGG | - | chr6.1:42844294-42844313 | None:intergenic | 45.0% | |
| TACTTGTGAACTCGTGTCAG+GGG | + | chr6.1:42845374-42845393 | MS.gene021190:intron | 45.0% | |
| TATTAGGCCTAATGCGGTTG+CGG | + | chr6.1:42844017-42844036 | MS.gene021190:intron | 45.0% | |
| TCAACAAACCACTCATCCTC+TGG | - | chr6.1:42846702-42846721 | None:intergenic | 45.0% | |
| TGAATACAGTGTCTTGCCAG+AGG | + | chr6.1:42846683-42846702 | MS.gene021190:intron | 45.0% | |
| TGTACTTGTGAACTCGTGTC+AGG | + | chr6.1:42845372-42845391 | MS.gene021190:intron | 45.0% | |
| TTACCATTCGTGACTCCAAG+AGG | + | chr6.1:42840649-42840668 | MS.gene021190:CDS | 45.0% | |
| TTCTTCAGTTCACGCTGTTC+CGG | - | chr6.1:42844577-42844596 | None:intergenic | 45.0% | |
| TTGAGATTGCTATGGAGTCG+TGG | + | chr6.1:42842247-42842266 | MS.gene021190:intron | 45.0% | |
| TTGATGCTGTTGCTGCTACA+GGG | + | chr6.1:42845939-42845958 | MS.gene021190:CDS | 45.0% | |
| TTTGGGTATGGAGGAGAAAG+GGG | + | chr6.1:42844705-42844724 | MS.gene021190:CDS | 45.0% | |
| ! | ACCCAAGCCTATTTTCCTCT+AGG | + | chr6.1:42843841-42843860 | MS.gene021190:intron | 45.0% |
| ! | CAAGCCTATTTTCCTCTAGG+TGG | + | chr6.1:42843844-42843863 | MS.gene021190:intron | 45.0% |
| ! | CACTGATTGAAAGCTTAGGC+TGG | - | chr6.1:42843496-42843515 | None:intergenic | 45.0% |
| ! | CTATTTTCCTCTAGGTGGGA+TGG | + | chr6.1:42843849-42843868 | MS.gene021190:intron | 45.0% |
| ! | GAAGGTCGGTTTCAATCTCT+TGG | + | chr6.1:42840807-42840826 | MS.gene021190:intron | 45.0% |
| ! | TGATGCGATAGTTGCCACTT+CGG | - | chr6.1:42845082-42845101 | None:intergenic | 45.0% |
| ! | TGGTCGGGAAATCAGGATTT+TGG | - | chr6.1:42842279-42842298 | None:intergenic | 45.0% |
| ! | TTGGATGGACTTGCACTAGA+AGG | + | chr6.1:42844298-42844317 | MS.gene021190:CDS | 45.0% |
| !! | AAATTGGTAGCGGTCCAATG+TGG | + | chr6.1:42846016-42846035 | MS.gene021190:intron | 45.0% |
| !! | AACCAAGCTGCATTGGTTCA+TGG | + | chr6.1:42842555-42842574 | MS.gene021190:CDS | 45.0% |
| !! | ATATCAGACACGGTACTGAC+AGG | - | chr6.1:42843788-42843807 | None:intergenic | 45.0% |
| !! | CGGCACTGACATATAGACAT+TGG | + | chr6.1:42844946-42844965 | MS.gene021190:intron | 45.0% |
| !! | GCGTCATTGATTCATGTAGC+AGG | - | chr6.1:42843877-42843896 | None:intergenic | 45.0% |
| !! | TTAGCAGAAGGGTGTCAACT+TGG | + | chr6.1:42842579-42842598 | MS.gene021190:CDS | 45.0% |
| !! | AAAGTAATATATTATTATTA+TGG | - | chr6.1:42843643-42843662 | None:intergenic | 5.0% |
| !! | TAAATAAATATAAAATATTC+AGG | + | chr6.1:42842345-42842364 | MS.gene021190:intron | 5.0% |
| AATGTTAACCCTCCGGTTCC+TGG | - | chr6.1:42840995-42841014 | None:intergenic | 50.0% | |
| ACCAGGGCAAAAAAGTGAGG+AGG | - | chr6.1:42843576-42843595 | None:intergenic | 50.0% | |
| AGAAAGGGGAGAGACCTGAA+TGG | + | chr6.1:42844719-42844738 | MS.gene021190:CDS | 50.0% | |
| ATGTTAACCCTCCGGTTCCT+GGG | - | chr6.1:42840994-42841013 | None:intergenic | 50.0% | |
| CACTAACTGTTGTGGACTCG+AGG | - | chr6.1:42843019-42843038 | None:intergenic | 50.0% | |
| CGAACTCCTTTAGGTCCTCT+TGG | + | chr6.1:42845210-42845229 | MS.gene021190:CDS | 50.0% | |
| GATCCTCTTGGAGTCACGAA+TGG | - | chr6.1:42840655-42840674 | None:intergenic | 50.0% | |
| GCAATCTTGGTCGGGAAATC+AGG | - | chr6.1:42842286-42842305 | None:intergenic | 50.0% | |
| TACTAGGGTTCCTTTCACCC+AGG | + | chr6.1:42840974-42840993 | MS.gene021190:intron | 50.0% | |
| TCAGACGATCAACTTCACGC+TGG | - | chr6.1:42844606-42844625 | None:intergenic | 50.0% | |
| TCTACCTGTTGAAGGCCAAG+AGG | - | chr6.1:42845228-42845247 | None:intergenic | 50.0% | |
| TGAAGGCCAAGAGGACCTAA+AGG | - | chr6.1:42845219-42845238 | None:intergenic | 50.0% | |
| TGCACTAGAAGGACTTCACC+AGG | + | chr6.1:42844309-42844328 | MS.gene021190:CDS | 50.0% | |
| TGCAGGCTGCATCACATGAT+CGG | - | chr6.1:42844063-42844082 | None:intergenic | 50.0% | |
| TTCTCAGTGACAGCTGAACC+TGG | - | chr6.1:42844373-42844392 | None:intergenic | 50.0% | |
| ! | TAGGAGCTTTTCGAAGACGC+AGG | + | chr6.1:42844256-42844275 | MS.gene021190:intron | 50.0% |
| !!! | TCCTCCTCACTTTTTTGCCC+TGG | + | chr6.1:42843572-42843591 | MS.gene021190:intron | 50.0% |
| AAGACCTCCCGATGCAGCTA+TGG | - | chr6.1:42843213-42843232 | None:intergenic | 55.0% | |
| CCGGATCAGCCCACACATAA+CGG | + | chr6.1:42846799-42846818 | MS.gene021190:CDS | 55.0% | |
| CGGTTGATCGAATCTCTGCG+CGG | - | chr6.1:42842905-42842924 | None:intergenic | 55.0% | |
| CTACAGGGCTAGATCCCAAC+AGG | + | chr6.1:42845954-42845973 | MS.gene021190:CDS | 55.0% | |
| GCTGCATGCAGGTTGTAGAG+TGG | - | chr6.1:42846364-42846383 | None:intergenic | 55.0% | |
| GGTTCCTTTCACCCAGGAAC+CGG | + | chr6.1:42840980-42840999 | MS.gene021190:intron | 55.0% | |
| GTGTCTTGCCAGAGGATGAG+TGG | + | chr6.1:42846691-42846710 | MS.gene021190:intron | 55.0% | |
| GTTGTGTCCGCAACCGCATT+AGG | - | chr6.1:42844027-42844046 | None:intergenic | 55.0% | |
| TCTCGCCTCCATAGCTGCAT+CGG | + | chr6.1:42843202-42843221 | MS.gene021190:CDS | 55.0% | |
| TTCAGTTCACGCTGTTCCGG+AGG | - | chr6.1:42844574-42844593 | None:intergenic | 55.0% | |
| TTGTGAACTCGTGTCAGGGG+TGG | + | chr6.1:42845377-42845396 | MS.gene021190:intron | 55.0% | |
| ! | AGGTCCTCTTGGCCTTCAAC+AGG | + | chr6.1:42845221-42845240 | MS.gene021190:CDS | 55.0% |
| ! | GGTAGCGGTCCAATGTGGAT+TGG | + | chr6.1:42846021-42846040 | MS.gene021190:intron | 55.0% |
| ! | TATGTGTGGGCTGATCCGGT+GGG | - | chr6.1:42846798-42846817 | None:intergenic | 55.0% |
| ! | TTATGTGTGGGCTGATCCGG+TGG | - | chr6.1:42846799-42846818 | None:intergenic | 55.0% |
| ACCTCCCGATGCAGCTATGG+AGG | - | chr6.1:42843210-42843229 | None:intergenic | 60.0% | |
| AGATGAGCTGCTACCGCGTG+CGG | + | chr6.1:42844480-42844499 | MS.gene021190:CDS | 60.0% | |
| ATCTCTGCGCGGCGTGTTGA+TGG | - | chr6.1:42842894-42842913 | None:intergenic | 60.0% | |
| CCTTTCACCCAGGAACCGGA+GGG | + | chr6.1:42840984-42841003 | MS.gene021190:intron | 60.0% | |
| CTCGCCTCCATAGCTGCATC+GGG | + | chr6.1:42843203-42843222 | MS.gene021190:CDS | 60.0% | |
| TCCTTTCACCCAGGAACCGG+AGG | + | chr6.1:42840983-42841002 | MS.gene021190:intron | 60.0% | |
| CCCTCCGGTTCCTGGGTGAA+AGG | - | chr6.1:42840987-42841006 | None:intergenic | 65.0% | |
| GCAGGTCCCATCCCACCTAG+AGG | - | chr6.1:42843859-42843878 | None:intergenic | 65.0% | |
| GCCTCCATAGCTGCATCGGG+AGG | + | chr6.1:42843206-42843225 | MS.gene021190:CDS | 65.0% | |
| !! | CTGCGCGGCGTGTTGATGGT+TGG | - | chr6.1:42842890-42842909 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 42840634 | 42846818 | 42840634 | ID=MS.gene021190 |
| chr6.1 | mRNA | 42840634 | 42846818 | 42840634 | ID=MS.gene021190.t1;Parent=MS.gene021190 |
| chr6.1 | exon | 42840634 | 42840810 | 42840634 | ID=MS.gene021190.t1.exon1;Parent=MS.gene021190.t1 |
| chr6.1 | CDS | 42840634 | 42840810 | 42840634 | ID=cds.MS.gene021190.t1;Parent=MS.gene021190.t1 |
| chr6.1 | exon | 42841786 | 42841883 | 42841786 | ID=MS.gene021190.t1.exon2;Parent=MS.gene021190.t1 |
| chr6.1 | CDS | 42841786 | 42841883 | 42841786 | ID=cds.MS.gene021190.t1;Parent=MS.gene021190.t1 |
| chr6.1 | exon | 42842494 | 42843541 | 42842494 | ID=MS.gene021190.t1.exon3;Parent=MS.gene021190.t1 |
| chr6.1 | CDS | 42842494 | 42843541 | 42842494 | ID=cds.MS.gene021190.t1;Parent=MS.gene021190.t1 |
| chr6.1 | exon | 42844259 | 42844762 | 42844259 | ID=MS.gene021190.t1.exon4;Parent=MS.gene021190.t1 |
| chr6.1 | CDS | 42844259 | 42844762 | 42844259 | ID=cds.MS.gene021190.t1;Parent=MS.gene021190.t1 |
| chr6.1 | exon | 42845060 | 42845242 | 42845060 | ID=MS.gene021190.t1.exon5;Parent=MS.gene021190.t1 |
| chr6.1 | CDS | 42845060 | 42845242 | 42845060 | ID=cds.MS.gene021190.t1;Parent=MS.gene021190.t1 |
| chr6.1 | exon | 42845839 | 42845975 | 42845839 | ID=MS.gene021190.t1.exon6;Parent=MS.gene021190.t1 |
| chr6.1 | CDS | 42845839 | 42845975 | 42845839 | ID=cds.MS.gene021190.t1;Parent=MS.gene021190.t1 |
| chr6.1 | exon | 42846692 | 42846818 | 42846692 | ID=MS.gene021190.t1.exon7;Parent=MS.gene021190.t1 |
| chr6.1 | CDS | 42846692 | 42846818 | 42846692 | ID=cds.MS.gene021190.t1;Parent=MS.gene021190.t1 |
| Gene Sequence |
| Protein sequence |
