AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene021549

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene021549.t1 MTR_1g009613 97.668 343 5 2 1 343 1 340 0.0 682
MS.gene021549.t1 MTR_0229s0060 97.107 242 4 2 1 242 1 239 1.69e-167 466
MS.gene021549.t1 MTR_4g127040 50.427 351 96 10 1 322 1 302 4.34e-88 268
MS.gene021549.t1 MTR_4g094908 39.899 396 127 13 1 343 1 338 8.06e-67 214
MS.gene021549.t1 MTR_3g108960 64.024 164 51 5 170 331 222 379 2.00e-62 204
MS.gene021549.t1 MTR_5g016610 58.394 137 50 2 208 343 141 271 1.26e-51 172
MS.gene021549.t1 MTR_0117s0040 65.823 79 27 0 244 322 53 131 1.86e-33 124
MS.gene021549.t1 MTR_2g032030 57.955 88 32 2 240 322 237 324 7.58e-29 115
MS.gene021549.t1 MTR_2g032030 57.955 88 32 2 240 322 237 324 7.66e-29 116
MS.gene021549.t1 MTR_7g079040 62.195 82 26 2 241 322 135 211 1.82e-28 113
MS.gene021549.t1 MTR_2g016770 54.762 84 37 1 242 324 11 94 1.18e-27 108
MS.gene021549.t1 MTR_2g016770 55.422 83 36 1 243 324 4 86 2.96e-27 107
MS.gene021549.t1 MTR_8g087000 52.809 89 35 1 241 322 45 133 7.92e-27 106
MS.gene021549.t1 MTR_2g083870 55.556 90 34 2 241 324 50 139 2.07e-26 105
MS.gene021549.t1 MTR_7g109600 51.136 88 38 1 240 322 23 110 4.15e-26 105
MS.gene021549.t1 MTR_8g087000 52.874 87 34 1 243 322 48 134 5.09e-26 104
MS.gene021549.t1 MTR_8g028565 58.537 82 29 1 241 322 136 212 1.23e-25 105
MS.gene021549.t1 MTR_4g082580 50.505 99 37 3 240 327 242 339 7.85e-23 98.6
MS.gene021549.t1 MTR_5g042920 57.317 82 31 2 249 327 301 381 1.22e-22 98.6
MS.gene021549.t1 MTR_5g042920 34.320 169 90 7 162 324 55 208 3.72e-13 70.5
MS.gene021549.t1 MTR_3g031220 40.690 145 74 4 192 326 283 425 2.31e-22 98.2
MS.gene021549.t1 MTR_3g031220 50.000 68 32 2 266 333 199 264 2.19e-12 68.2
MS.gene021549.t1 MTR_2g024350 59.375 64 26 0 259 322 2 65 5.24e-22 93.2
MS.gene021549.t1 MTR_1g099600 50.000 80 39 1 244 322 163 242 5.68e-22 94.7
MS.gene021549.t1 MTR_5g094430 52.381 84 36 2 247 327 209 291 6.34e-22 96.3
MS.gene021549.t1 MTR_5g094430 52.381 84 36 2 247 327 231 313 6.67e-22 96.3
MS.gene021549.t1 MTR_5g094430 52.381 84 36 2 247 327 343 425 8.30e-22 96.7
MS.gene021549.t1 MTR_7g109800 37.671 146 79 5 181 322 64 201 1.46e-21 93.6
MS.gene021549.t1 MTR_3g056100 49.474 95 39 3 241 327 239 332 3.69e-21 94.4
MS.gene021549.t1 MTR_2g024380 62.295 61 23 0 262 322 248 308 3.96e-21 94.4
MS.gene021549.t1 MTR_3g056100 46.667 105 46 4 241 337 383 485 3.97e-21 94.7
MS.gene021549.t1 MTR_3g056100 49.474 95 39 3 241 327 226 319 4.02e-21 94.0
MS.gene021549.t1 MTR_3g056100 46.667 105 46 4 241 337 370 472 4.19e-21 94.7
MS.gene021549.t1 MTR_7g011820 53.012 83 35 2 248 327 390 471 7.38e-21 93.6
MS.gene021549.t1 MTR_7g011820 47.059 85 39 4 257 337 219 301 1.00e-13 72.4
MS.gene021549.t1 MTR_5g074400 56.098 82 32 2 249 327 401 481 9.59e-21 93.6
MS.gene021549.t1 MTR_5g074400 54.386 57 24 2 266 322 244 298 8.56e-12 66.6
MS.gene021549.t1 MTR_4g013260 38.168 131 65 4 197 324 277 394 1.23e-20 92.8
MS.gene021549.t1 MTR_4g013260 50.877 57 27 1 266 322 185 240 7.47e-12 66.6
MS.gene021549.t1 MTR_4g094588 44.706 85 46 1 252 336 165 248 1.33e-20 91.7
MS.gene021549.t1 MTR_3g009470 52.439 82 38 1 246 327 476 556 2.18e-20 92.8
MS.gene021549.t1 MTR_3g009470 54.386 57 24 2 266 322 281 335 2.41e-12 68.6
MS.gene021549.t1 MTR_8g098945 61.404 57 22 0 266 322 130 186 4.52e-20 89.0
MS.gene021549.t1 MTR_2g088000 47.561 82 43 0 249 330 333 414 8.60e-20 90.9
MS.gene021549.t1 MTR_7g080020 48.421 95 46 2 246 338 474 567 8.90e-20 90.9
MS.gene021549.t1 MTR_7g080020 50.000 68 29 3 255 322 273 335 5.35e-12 67.4
MS.gene021549.t1 MTR_7g071120 39.568 139 65 5 192 327 263 385 1.27e-19 90.1
MS.gene021549.t1 MTR_7g071120 54.386 57 24 2 266 322 167 221 7.49e-11 63.5
MS.gene021549.t1 MTR_7g080000 49.398 83 38 2 248 327 412 493 1.44e-19 90.1
MS.gene021549.t1 MTR_7g080000 54.386 57 24 2 266 322 235 289 4.97e-12 67.4
MS.gene021549.t1 MTR_7g079010 31.677 161 94 4 184 329 45 204 1.74e-19 86.3
MS.gene021549.t1 MTR_7g100510 51.471 68 32 1 257 324 353 419 2.26e-19 89.0
MS.gene021549.t1 MTR_7g100510 47.619 84 41 3 257 339 180 261 5.94e-16 79.0
MS.gene021549.t1 MTR_2g023930 48.649 74 38 0 249 322 289 362 3.87e-19 88.6
MS.gene021549.t1 MTR_7g110720 40.426 141 58 7 189 322 152 273 4.64e-19 88.2
MS.gene021549.t1 MTR_4g132430 47.368 76 40 0 249 324 111 186 1.16e-18 86.3
MS.gene021549.t1 MTR_5g091390 45.679 81 43 1 252 332 144 223 1.32e-18 85.5
MS.gene021549.t1 MTR_7g062220 38.261 115 64 4 210 322 71 180 1.37e-18 85.5
MS.gene021549.t1 MTR_4g132430 48.649 74 38 0 249 322 245 318 1.65e-18 86.7
MS.gene021549.t1 MTR_7g110720 47.368 76 40 0 249 324 173 248 1.88e-18 85.9
MS.gene021549.t1 MTR_4g007060 53.846 65 30 0 258 322 121 185 2.35e-18 84.3
MS.gene021549.t1 MTR_1g086790 43.529 85 45 2 240 322 131 214 2.39e-18 84.7
MS.gene021549.t1 MTR_3g090860 40.441 136 54 8 210 337 84 200 2.57e-18 85.1
MS.gene021549.t1 MTR_3g053330 43.421 76 43 0 249 324 235 310 2.61e-18 85.9
MS.gene021549.t1 MTR_3g106060 48.611 72 37 0 251 322 124 195 3.11e-18 84.0
MS.gene021549.t1 MTR_4g007060 53.846 65 30 0 258 322 155 219 3.37e-18 84.3
MS.gene021549.t1 MTR_1g015140 50.704 71 34 1 252 322 89 158 3.44e-18 80.9
MS.gene021549.t1 MTR_4g049790 53.731 67 31 0 266 332 313 379 4.16e-18 85.5
MS.gene021549.t1 MTR_2g105060 44.048 84 43 1 239 322 147 226 5.26e-18 84.0
MS.gene021549.t1 MTR_4g094412 39.796 98 40 1 244 322 194 291 6.23e-18 85.1
MS.gene021549.t1 MTR_2g105060 44.048 84 43 1 239 322 72 151 6.57e-18 82.0
MS.gene021549.t1 MTR_4g094412 39.796 98 40 1 244 322 203 300 7.62e-18 84.7
MS.gene021549.t1 MTR_7g009730 46.988 83 36 2 246 326 204 280 9.03e-18 84.7
MS.gene021549.t1 MTR_1g013760 52.632 57 27 0 266 322 141 197 9.62e-18 82.4
MS.gene021549.t1 MTR_2g033820 45.333 75 40 1 248 322 186 259 1.30e-17 83.6
MS.gene021549.t1 MTR_3g095080 45.783 83 41 2 251 330 127 208 1.45e-17 80.9
MS.gene021549.t1 MTR_8g092140 48.052 77 35 2 251 323 142 217 1.64e-17 80.9
MS.gene021549.t1 MTR_3g095080 45.783 83 41 2 251 330 151 232 1.75e-17 80.9
MS.gene021549.t1 MTR_3g104750 47.436 78 37 2 248 322 84 160 1.79e-17 79.0
MS.gene021549.t1 MTR_5g043880 43.902 82 45 1 241 322 100 180 1.95e-17 81.6
MS.gene021549.t1 MTR_8g007270 45.783 83 41 2 244 323 130 211 2.43e-17 80.5
MS.gene021549.t1 MTR_8g067635 45.833 96 46 2 242 337 329 418 3.18e-17 82.8
MS.gene021549.t1 MTR_8g092010 43.182 88 44 2 242 324 80 166 4.46e-17 78.6
MS.gene021549.t1 MTR_4g130900 57.895 57 23 1 266 322 360 415 5.31e-17 82.0
MS.gene021549.t1 MTR_4g107970 52.542 59 28 0 266 324 179 237 8.99e-17 81.6
MS.gene021549.t1 MTR_1g077780 45.783 83 44 1 246 328 43 124 1.01e-16 76.6
MS.gene021549.t1 MTR_4g107970 52.542 59 28 0 266 324 256 314 1.23e-16 81.3
MS.gene021549.t1 MTR_7g117200 43.529 85 44 2 240 320 91 175 1.40e-16 79.7
MS.gene021549.t1 MTR_7g028415 49.231 65 32 1 261 325 89 152 2.45e-16 76.3
MS.gene021549.t1 MTR_7g028710 49.231 65 32 1 261 325 89 152 2.45e-16 76.3
MS.gene021549.t1 MTR_8g069935 41.489 94 49 2 241 333 311 399 2.77e-16 80.1
MS.gene021549.t1 MTR_2g045360 52.542 59 28 0 266 324 212 270 3.29e-16 79.7
MS.gene021549.t1 MTR_4g122530 44.595 74 40 1 249 322 192 264 3.33e-16 79.3
MS.gene021549.t1 MTR_3g095040 45.000 80 43 1 243 322 96 174 3.80e-16 76.6
MS.gene021549.t1 MTR_5g097490 49.296 71 35 1 252 322 239 308 4.25e-16 79.0
MS.gene021549.t1 MTR_4g049760 50.746 67 33 0 266 332 291 357 4.65e-16 79.3
MS.gene021549.t1 MTR_8g067650 43.878 98 51 2 241 337 314 408 5.30e-16 79.3
MS.gene021549.t1 MTR_5g067680 43.182 88 44 3 236 320 175 259 8.87e-16 77.8
MS.gene021549.t1 MTR_1g013790 46.774 62 33 0 263 324 99 160 3.31e-15 74.7
MS.gene021549.t1 MTR_5g018380 60.345 58 20 2 265 322 123 177 4.36e-15 72.8
MS.gene021549.t1 MTR_8g027860 41.573 89 49 2 238 323 108 196 7.67e-15 75.1
MS.gene021549.t1 MTR_1g078260 58.065 62 24 2 262 322 244 304 1.43e-14 74.7
MS.gene021549.t1 MTR_6g086555 49.254 67 32 2 266 331 207 272 1.45e-14 74.7
MS.gene021549.t1 MTR_8g096730 39.706 68 40 1 262 329 67 133 5.86e-14 68.9
MS.gene021549.t1 MTR_6g053200 36.145 83 48 1 240 322 310 387 1.14e-13 72.4
MS.gene021549.t1 MTR_8g099350 36.538 104 52 4 228 320 89 189 1.67e-13 71.2
MS.gene021549.t1 MTR_3g031220 50.000 68 32 2 266 333 199 264 1.43e-12 68.6
MS.gene021549.t1 MTR_5g067700 42.857 84 39 3 239 320 87 163 1.57e-12 66.6
MS.gene021549.t1 MTR_3g009470 54.386 57 24 2 266 322 281 335 2.27e-12 68.2
MS.gene021549.t1 MTR_4g047580 42.169 83 46 1 248 330 266 346 9.04e-12 66.2
MS.gene021549.t1 MTR_2g075680 35.294 102 64 1 221 320 104 205 1.45e-11 64.7
MS.gene021549.t1 MTR_8g087000 63.158 38 14 0 285 322 35 72 2.48e-11 62.4
MS.gene021549.t1 MTR_3g093830 40.244 82 39 2 241 320 111 184 2.55e-11 64.3
MS.gene021549.t1 MTR_7g073430 36.842 95 56 3 229 320 86 179 4.60e-11 63.2
MS.gene021549.t1 MTR_2g075700 38.667 75 44 1 248 320 127 201 8.65e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene021549.t1 AT4G31550 59.551 356 98 12 1 342 1 324 1.80e-127 368
MS.gene021549.t1 AT4G31550 59.551 356 97 13 1 342 1 323 1.37e-126 366
MS.gene021549.t1 AT2G24570 59.659 352 100 14 1 342 1 320 1.24e-117 343
MS.gene021549.t1 AT4G31550 55.556 297 88 11 1 285 1 265 2.67e-90 271
MS.gene021549.t1 AT4G24240 43.258 356 154 12 1 324 1 340 2.78e-68 218
MS.gene021549.t1 AT2G23320 38.527 353 134 9 1 324 1 299 4.87e-63 203
MS.gene021549.t1 AT3G04670 37.500 344 160 11 11 323 1 320 1.44e-56 187
MS.gene021549.t1 AT2G30590 54.913 173 65 5 154 322 207 370 2.41e-55 185
MS.gene021549.t1 AT5G28650 35.942 345 164 11 11 323 1 320 2.62e-51 173
MS.gene021549.t1 AT2G23320 33.968 315 123 10 1 285 1 260 1.17e-34 128
MS.gene021549.t1 AT3G04670 32.903 310 153 11 11 289 1 286 2.01e-31 120
MS.gene021549.t1 AT4G24240 54.310 116 43 3 170 285 196 301 2.13e-29 115
MS.gene021549.t1 AT2G34830 55.682 88 34 2 240 322 185 272 9.24e-29 115
MS.gene021549.t1 AT2G34830 55.682 88 34 2 240 322 194 281 1.01e-28 115
MS.gene021549.t1 AT1G29280 57.609 92 32 3 238 322 40 131 3.10e-28 110
MS.gene021549.t1 AT1G30650 54.545 88 35 2 240 322 187 274 2.72e-27 111
MS.gene021549.t1 AT4G01250 57.143 91 33 2 232 322 101 185 5.03e-26 105
MS.gene021549.t1 AT3G58710 55.682 88 33 2 241 322 40 127 1.18e-25 104
MS.gene021549.t1 AT3G58710 55.682 88 33 2 241 322 41 128 3.14e-25 103
MS.gene021549.t1 AT5G52830 54.878 82 33 1 241 322 145 222 1.41e-24 102
MS.gene021549.t1 AT2G38470 57.317 82 31 2 249 327 343 423 7.18e-23 99.8
MS.gene021549.t1 AT2G38470 54.386 57 24 2 266 322 185 239 8.05e-12 66.6
MS.gene021549.t1 AT5G45050 50.000 82 37 1 241 322 1132 1209 1.95e-21 96.3
MS.gene021549.t1 AT5G45050 50.000 82 37 1 241 322 1160 1237 1.99e-21 96.3
MS.gene021549.t1 AT1G13960 55.696 79 31 2 249 324 237 314 3.51e-21 93.6
MS.gene021549.t1 AT1G13960 54.839 62 25 3 262 322 72 131 8.50e-14 72.0
MS.gene021549.t1 AT2G03340 49.495 99 37 3 241 327 379 476 3.66e-21 94.7
MS.gene021549.t1 AT2G03340 50.746 67 30 3 259 324 243 307 6.05e-14 73.2
MS.gene021549.t1 AT5G07100 57.534 73 30 1 252 324 128 199 5.21e-21 90.1
MS.gene021549.t1 AT5G07100 57.534 73 30 1 252 324 128 199 5.21e-21 90.1
MS.gene021549.t1 AT5G07100 57.534 73 30 1 252 324 128 199 5.21e-21 90.1
MS.gene021549.t1 AT5G07100 57.534 73 30 1 252 324 128 199 5.21e-21 90.1
MS.gene021549.t1 AT1G13960 55.696 79 31 2 249 324 390 467 5.93e-21 94.0
MS.gene021549.t1 AT1G13960 54.839 62 25 3 262 322 225 284 8.56e-14 72.8
MS.gene021549.t1 AT2G04880 61.905 63 23 1 262 324 280 341 6.25e-21 93.6
MS.gene021549.t1 AT2G04880 61.905 63 23 1 262 324 304 365 7.50e-21 93.6
MS.gene021549.t1 AT5G45050 50.000 82 37 1 241 322 1021 1098 8.50e-21 94.4
MS.gene021549.t1 AT4G23550 50.000 80 36 1 245 324 124 199 8.56e-21 91.7
MS.gene021549.t1 AT4G26640 54.545 77 31 2 251 324 188 263 1.19e-20 92.4
MS.gene021549.t1 AT4G26640 54.545 77 31 2 251 324 188 263 1.19e-20 92.4
MS.gene021549.t1 AT4G26640 54.545 77 31 2 251 324 188 263 1.19e-20 92.4
MS.gene021549.t1 AT4G26640 54.545 77 31 2 251 324 188 263 1.19e-20 92.4
MS.gene021549.t1 AT5G49520 51.351 74 35 1 249 322 205 277 1.27e-20 92.4
MS.gene021549.t1 AT1G29860 48.148 81 41 1 249 329 120 199 1.55e-20 90.5
MS.gene021549.t1 AT5G07100 46.739 92 48 1 233 324 202 292 1.56e-20 90.9
MS.gene021549.t1 AT5G26170 51.389 72 34 1 252 323 100 170 2.10e-20 87.4
MS.gene021549.t1 AT4G26640 54.545 77 31 2 251 324 364 439 2.29e-20 92.4
MS.gene021549.t1 AT4G26640 54.545 77 31 2 251 324 292 367 2.31e-20 92.0
MS.gene021549.t1 AT4G26640 54.545 77 31 2 251 324 324 399 2.47e-20 92.4
MS.gene021549.t1 AT5G56270 53.659 82 37 1 246 327 468 548 3.75e-20 92.0
MS.gene021549.t1 AT5G56270 52.632 57 25 2 266 322 274 328 5.30e-11 64.3
MS.gene021549.t1 AT4G18170 46.154 91 48 1 234 324 141 230 6.62e-20 89.4
MS.gene021549.t1 AT2G37260 42.742 124 63 3 201 324 212 327 6.89e-20 89.7
MS.gene021549.t1 AT2G37260 53.448 58 25 2 266 323 86 141 3.14e-12 67.4
MS.gene021549.t1 AT2G37260 42.742 124 63 3 201 324 210 325 7.96e-20 89.4
MS.gene021549.t1 AT2G37260 53.448 58 25 2 266 323 84 139 3.37e-12 67.0
MS.gene021549.t1 AT2G37260 42.742 124 63 3 201 324 292 407 1.13e-19 89.7
MS.gene021549.t1 AT2G37260 53.448 58 25 2 266 323 166 221 2.92e-12 67.8
MS.gene021549.t1 AT2G40740 34.532 139 78 3 185 320 102 230 1.45e-19 87.8
MS.gene021549.t1 AT4G39410 47.126 87 42 2 240 323 195 280 1.86e-19 87.8
MS.gene021549.t1 AT2G40740 34.532 139 78 3 185 320 111 239 1.95e-19 87.8
MS.gene021549.t1 AT4G04450 50.000 74 37 0 249 322 182 255 2.74e-19 88.6
MS.gene021549.t1 AT4G26440 51.220 82 39 1 246 327 353 433 2.95e-19 89.4
MS.gene021549.t1 AT4G26440 53.448 58 25 2 266 323 179 234 1.02e-11 66.2
MS.gene021549.t1 AT4G04450 50.000 74 37 0 249 322 276 349 5.19e-19 88.2
MS.gene021549.t1 AT1G69310 48.837 86 39 3 240 322 120 203 6.04e-19 85.9
MS.gene021549.t1 AT1G69310 48.837 86 39 3 240 322 120 203 6.04e-19 85.9
MS.gene021549.t1 AT1G69310 48.837 86 39 3 240 322 120 203 6.04e-19 85.9
MS.gene021549.t1 AT2G47260 43.902 82 45 1 241 322 150 230 6.48e-19 86.7
MS.gene021549.t1 AT4G31800 46.575 73 39 0 250 322 96 168 1.05e-18 84.7
MS.gene021549.t1 AT3G01080 53.165 79 33 2 249 324 325 402 1.30e-18 87.0
MS.gene021549.t1 AT3G01080 56.452 62 24 3 262 322 201 260 1.57e-14 74.7
MS.gene021549.t1 AT3G01080 53.165 79 33 2 249 324 287 364 1.44e-18 86.7
MS.gene021549.t1 AT3G01080 56.452 62 24 3 262 322 163 222 1.87e-14 74.3
MS.gene021549.t1 AT4G31800 46.575 73 39 0 250 322 161 233 1.69e-18 85.1
MS.gene021549.t1 AT4G22070 48.649 74 38 0 249 322 281 354 1.72e-18 86.7
MS.gene021549.t1 AT4G22070 48.649 74 38 0 249 322 281 354 1.72e-18 86.7
MS.gene021549.t1 AT4G22070 48.649 74 38 0 249 322 281 354 1.72e-18 86.7
MS.gene021549.t1 AT4G22070 48.649 74 38 0 249 322 281 354 1.72e-18 86.7
MS.gene021549.t1 AT1G62300 48.649 74 38 0 249 322 296 369 1.73e-18 87.0
MS.gene021549.t1 AT5G46350 50.685 73 35 1 252 324 170 241 2.58e-18 84.7
MS.gene021549.t1 AT5G15130 47.561 82 42 1 243 324 164 244 3.60e-18 85.9
MS.gene021549.t1 AT5G15130 47.561 82 42 1 243 324 206 286 3.81e-18 85.9
MS.gene021549.t1 AT2G44745 41.414 99 54 2 227 322 104 201 1.05e-17 81.3
MS.gene021549.t1 AT3G62340 47.500 80 41 1 243 322 96 174 1.26e-17 82.0
MS.gene021549.t1 AT4G01720 48.649 74 38 0 249 322 223 296 1.78e-17 83.6
MS.gene021549.t1 AT5G45260 32.530 166 80 4 159 322 1132 1267 3.52e-17 83.6
MS.gene021549.t1 AT1G68150 56.140 57 25 0 266 322 236 292 7.66e-17 81.3
MS.gene021549.t1 AT1G55600 44.156 77 42 1 246 322 288 363 7.83e-17 81.6
MS.gene021549.t1 AT1G64000 40.449 89 49 2 244 329 90 177 8.83e-17 78.2
MS.gene021549.t1 AT4G30935 51.613 62 29 1 263 324 329 389 9.63e-17 81.3
MS.gene021549.t1 AT5G41570 42.353 85 45 2 248 329 78 161 1.15e-16 77.4
MS.gene021549.t1 AT2G46130 42.857 84 44 2 249 329 11 93 1.80e-16 74.7
MS.gene021549.t1 AT1G18860 48.101 79 40 1 244 322 219 296 2.17e-16 80.5
MS.gene021549.t1 AT5G13080 46.053 76 39 2 261 336 63 136 2.35e-16 75.5
MS.gene021549.t1 AT1G80840 38.776 98 54 2 239 331 116 212 2.74e-16 78.6
MS.gene021549.t1 AT2G25000 44.595 74 41 0 250 323 88 161 3.50e-16 77.0
MS.gene021549.t1 AT2G25000 44.595 74 41 0 250 323 88 161 3.50e-16 77.0
MS.gene021549.t1 AT2G25000 44.595 74 41 0 250 323 110 183 6.42e-16 76.6
MS.gene021549.t1 AT2G30250 43.023 86 45 2 247 329 307 391 8.25e-16 78.2
MS.gene021549.t1 AT2G25000 44.595 74 41 0 250 323 131 204 8.39e-16 77.0
MS.gene021549.t1 AT3G01970 48.438 64 32 1 261 324 61 123 8.88e-16 73.9
MS.gene021549.t1 AT2G21900 54.386 57 25 1 266 322 110 165 1.01e-15 75.1
MS.gene021549.t1 AT5G64810 45.070 71 38 1 252 322 97 166 2.02e-15 74.3
MS.gene021549.t1 AT3G01080 57.895 57 22 2 266 322 206 260 8.94e-15 74.7
MS.gene021549.t1 AT5G43290 50.667 75 33 2 248 322 100 170 9.07e-15 73.9
MS.gene021549.t1 AT1G69310 46.512 86 37 4 240 322 120 199 1.22e-14 73.6
MS.gene021549.t1 AT4G11070 43.373 83 44 2 241 320 84 166 2.52e-13 69.7
MS.gene021549.t1 AT4G11070 43.373 83 44 2 241 320 116 198 2.87e-13 70.1
MS.gene021549.t1 AT1G69810 37.374 99 53 2 225 322 171 261 7.65e-13 69.3
MS.gene021549.t1 AT1G69810 37.374 99 53 2 225 322 113 203 8.85e-13 68.6
MS.gene021549.t1 AT3G56400 32.743 113 71 3 212 320 66 177 1.30e-12 67.8
MS.gene021549.t1 AT2G46130 39.286 84 43 2 249 329 11 89 1.80e-12 63.5
MS.gene021549.t1 AT5G24110 41.772 79 39 3 246 320 95 170 2.24e-12 67.4
MS.gene021549.t1 AT1G66560 49.153 59 28 1 264 320 102 160 2.35e-12 66.6
MS.gene021549.t1 AT2G46400 35.789 95 57 2 230 320 67 161 3.20e-12 66.6
MS.gene021549.t1 AT4G23810 33.929 112 71 2 212 320 104 215 3.55e-12 67.0
MS.gene021549.t1 AT4G12020 50.877 57 26 2 266 322 469 523 3.02e-11 65.5
MS.gene021549.t1 AT4G12020 50.877 57 26 2 266 322 469 523 3.02e-11 65.5
MS.gene021549.t1 AT4G12020 50.877 57 26 2 266 322 469 523 3.36e-11 65.1
MS.gene021549.t1 AT4G12020 50.877 57 26 2 266 322 469 523 3.45e-11 65.1
MS.gene021549.t1 AT4G12020 50.877 57 26 2 266 322 469 523 3.49e-11 65.1
MS.gene021549.t1 AT4G12020 50.877 57 26 2 266 322 469 523 3.49e-11 65.1
MS.gene021549.t1 AT4G12020 50.877 57 26 2 266 322 469 523 3.49e-11 65.1
MS.gene021549.t1 AT4G12020 50.877 57 26 2 266 322 469 523 3.88e-11 65.1
MS.gene021549.t1 AT4G12020 50.877 57 26 2 266 322 469 523 4.02e-11 65.1
MS.gene021549.t1 AT4G12020 50.877 57 26 2 266 322 402 456 4.04e-11 65.1
MS.gene021549.t1 AT4G12020 50.877 57 26 2 266 322 469 523 4.94e-11 64.7
MS.gene021549.t1 AT2G40750 34.444 90 49 2 233 320 128 209 5.95e-11 63.5

Find 102 sgRNAs with CRISPR-Local

Find 203 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTCAACGTGTTTCCTTGC+TGG 0.192745 1.4:+10210844 None:intergenic
GAACATTCCGATGACGTTTC+AGG 0.218659 1.4:-10212549 MS.gene021549:CDS
TTTATGTCATCTGCTATTAC+TGG 0.300028 1.4:-10212699 MS.gene021549:CDS
CGCATCCGGGATTGTGGGTT+TGG 0.306368 1.4:-10210740 MS.gene021549:CDS
GAGATAGCTGGTGTCGCCGC+TGG 0.336141 1.4:+10212630 None:intergenic
GAGCTCAAAACGACGTCGTT+TGG 0.354917 1.4:+10212798 None:intergenic
TTCTGATGCAGCCTCTTGTA+TGG 0.355564 1.4:+10213178 None:intergenic
GAACCGGGGCGCGTCTGAAC+CGG 0.362386 1.4:+10213024 None:intergenic
GGCGCGTGACGCACGGAGAT+TGG 0.371570 1.4:+10212873 None:intergenic
GACGGAGAAGGAAAGTGTTT+TGG 0.384362 1.4:+10212915 None:intergenic
TTGGTTGATGAGAAAGGGTT+AGG 0.397259 1.4:+10213129 None:intergenic
TATAACTCTTACCGTGGATA+TGG 0.397980 1.4:+10210989 None:intergenic
ACTGGTGATGGAAGCGTTAA+CGG 0.421732 1.4:-10212681 MS.gene021549:CDS
GCGATGCAGGAGAACGCATC+CGG 0.423327 1.4:-10210754 MS.gene021549:CDS
CACGATTCAAGCTGCGATGC+AGG 0.423508 1.4:-10210767 MS.gene021549:CDS
GCTCAACGTGTTTCCTTGCT+GGG 0.423889 1.4:+10210845 None:intergenic
GCGTCTGAACCGGGCGTGAC+CGG 0.426753 1.4:+10213034 None:intergenic
TTCATCACCACCGGTTCAAC+CGG 0.430740 1.4:-10212988 MS.gene021549:CDS
AACATTCCGATGACGTTTCA+GGG 0.431021 1.4:-10212548 MS.gene021549:CDS
ATTGAGTTGGTTGATGAGAA+AGG 0.438129 1.4:+10213123 None:intergenic
CGGCGGAAAACCGCCGCTAT+CGG 0.446685 1.4:-10212607 MS.gene021549:CDS
ATCTCTTTACTTAACCGAAC+CGG 0.452961 1.4:-10213053 MS.gene021549:CDS
TGAATCTGAACCGGTTGAAC+CGG 0.453562 1.4:+10212978 None:intergenic
AGTTGAGTGTTTAATTGAGT+TGG 0.455065 1.4:+10213110 None:intergenic
GAAGATGAGGAGGAATGAAC+CGG 0.456286 1.4:+10213008 None:intergenic
ATGCTGATTGTAACGTATGA+AGG 0.457248 1.4:-10210802 MS.gene021549:CDS
GAGTACTCATGGCGGAAATA+CGG 0.458622 1.4:-10211034 MS.gene021549:CDS
GACAGGGTTGGTGTTTGAAC+CGG 0.458926 1.4:+10212942 None:intergenic
CTGGTGATGGAAGCGTTAAC+GGG 0.460991 1.4:-10212680 MS.gene021549:CDS
TTCTTTCATCAAAATGGCAG+TGG 0.466111 1.4:-10213237 None:intergenic
TTGAGTTGGTTGATGAGAAA+GGG 0.466292 1.4:+10213124 None:intergenic
CAAAATGGCAGTGGAACTCA+TGG 0.473399 1.4:-10213228 None:intergenic
GTACTCGTCCGGTGGTATAT+CGG 0.473843 1.4:+10211051 None:intergenic
TACGTTACAATCAGCATCGT+TGG 0.473963 1.4:+10210808 None:intergenic
CGCCCGGTTCAGACGCGCCC+CGG 0.476428 1.4:-10213027 MS.gene021549:CDS
GATTCAATCCACTCCTTCAC+CGG 0.477697 1.4:-10212961 MS.gene021549:CDS
CTCCTCATCTTCATCACCAC+CGG 0.490654 1.4:-10212997 MS.gene021549:CDS
GGAGAACGCATCCGGGATTG+TGG 0.492453 1.4:-10210746 MS.gene021549:CDS
AACCGGGGCGCGTCTGAACC+GGG 0.500032 1.4:+10213025 None:intergenic
TCATCTGCTATTACTGGTGA+TGG 0.500505 1.4:-10212693 MS.gene021549:CDS
TGAACCGGGCGTGACCGGTT+CGG 0.504434 1.4:+10213039 None:intergenic
AATCAGCATCGTTGGATCGT+CGG 0.504895 1.4:+10210816 None:intergenic
AGATAGCTGGTGTCGCCGCT+GGG 0.505573 1.4:+10212631 None:intergenic
TACAAGTGTAGTACAGTGAG+AGG 0.510799 1.4:-10210871 MS.gene021549:CDS
CGGCGGTGCCGTCTAAGAAA+AGG 0.512268 1.4:-10212587 MS.gene021549:CDS
ATTGGCGCCGGTGACAGTGC+AGG 0.516466 1.4:+10212891 None:intergenic
CGGAAAACCGCCGCTATCGG+CGG 0.520458 1.4:-10212604 MS.gene021549:CDS
AAGAAAAGGTGTCATGATCA+TGG 0.525519 1.4:-10212573 MS.gene021549:CDS
AATCTCCGTGCGTCACGCGC+CGG 0.525708 1.4:-10212871 MS.gene021549:CDS
GCGGCGACACCAGCTATCTC+CGG 0.537481 1.4:-10212627 MS.gene021549:CDS
TCCGTCACCTGCACTGTCAC+CGG 0.537546 1.4:-10212898 MS.gene021549:CDS
GGAAGCGTTAACGGGAAACA+AGG 0.537738 1.4:-10212672 MS.gene021549:CDS
GAGAACGCATCCGGGATTGT+GGG 0.542352 1.4:-10210745 MS.gene021549:CDS
GGATATGGTGATCCCTTGAT+CGG 0.543035 1.4:+10211004 None:intergenic
ATACAAGAGGCTGCATCAGA+AGG 0.544462 1.4:-10213176 MS.gene021549:CDS
ATACGGTCAGAAACCGATCA+AGG 0.544971 1.4:-10211017 MS.gene021549:CDS
GTTGGTGTTTGAACCGGTGA+AGG 0.548366 1.4:+10212948 None:intergenic
TTCCGCCATGAGTACTCGTC+CGG 0.550529 1.4:+10211040 None:intergenic
TTAACCGAACCGGTCACGCC+CGG 0.551066 1.4:-10213043 MS.gene021549:CDS
GCTCGCCGGCGCGTGACGCA+CGG 0.552645 1.4:+10212866 None:intergenic
TGCTGATTGTAACGTATGAA+GGG 0.555435 1.4:-10210801 MS.gene021549:CDS
CGATGCAGGAGAACGCATCC+GGG 0.559528 1.4:-10210753 MS.gene021549:CDS
AAATACCAAACCCACAATCC+CGG 0.560277 1.4:+10210735 None:intergenic
GAAGAGGACTGTGAGAGTAC+CGG 0.569882 1.4:-10211092 MS.gene021549:CDS
GACGGCACCGCCGATAGCGG+CGG 0.571524 1.4:+10212597 None:intergenic
TTAGACGGCACCGCCGATAG+CGG 0.572147 1.4:+10212594 None:intergenic
AAGATGAGGAGGAATGAACC+GGG 0.573874 1.4:+10213009 None:intergenic
TGCGGTTGAACAAAGCTCGC+CGG 0.578616 1.4:+10212852 None:intergenic
GGAGTGGATTGAATCTGAAC+CGG 0.578656 1.4:+10212969 None:intergenic
TGACGCACGGAGATTGGCGC+CGG 0.582468 1.4:+10212879 None:intergenic
GAACTTAGAAACGGTGTGGT+CGG 0.585451 1.4:+10213085 None:intergenic
CAGTGAGAGGGTGCCCAGCA+AGG 0.588389 1.4:-10210858 MS.gene021549:CDS
GACAGTGCAGGTGACGGAGA+AGG 0.589986 1.4:+10212903 None:intergenic
CGCCATGAGTACTCGTCCGG+TGG 0.590482 1.4:+10211043 None:intergenic
GCCGGTGACAGTGCAGGTGA+CGG 0.596080 1.4:+10212897 None:intergenic
AGTGTCATGCTGTGTGGTTG+CGG 0.596455 1.4:+10212834 None:intergenic
TACCACCGGACGAGTACTCA+TGG 0.597468 1.4:-10211045 MS.gene021549:CDS
ATCAGAAGGACTCAAAGGTA+TGG 0.599816 1.4:-10213162 MS.gene021549:CDS
GCGGTCTTTGAACTTATCGC+CGG 0.605125 1.4:+10211073 None:intergenic
AAAATGGCAGTGGAACTCAT+GGG 0.610326 1.4:-10213227 MS.gene021549:CDS
TACGGTCAGAAACCGATCAA+GGG 0.612371 1.4:-10211016 MS.gene021549:CDS
CGGTGGTGATGAAGATGAGG+AGG 0.613126 1.4:+10212998 None:intergenic
ATTCGACCCTGAAACGTCAT+CGG 0.616411 1.4:+10212542 None:intergenic
GCTGCATCAGAAGGACTCAA+AGG 0.616681 1.4:-10213167 MS.gene021549:CDS
CGAGAATTCAAGCTCAACCA+TGG 0.618884 1.4:+10212761 None:intergenic
TGTTTGAACCGGTGAAGGAG+TGG 0.635060 1.4:+10212953 None:intergenic
ATCTGAACCGGTTGAACCGG+TGG 0.642716 1.4:+10212981 None:intergenic
AGTGCCACTGTGTCAAGAGA+AGG 0.645447 1.4:-10212518 MS.gene021549:intron
GGTTGAGCTTGAATTCTCGA+AGG 0.647277 1.4:-10212757 MS.gene021549:CDS
GCTGATTGTAACGTATGAAG+GGG 0.650464 1.4:-10210800 MS.gene021549:CDS
AAATGGCAGTGGAACTCATG+GGG 0.650555 1.4:-10213226 MS.gene021549:CDS
TCAAGGGATCACCATATCCA+CGG 0.651372 1.4:-10211000 MS.gene021549:intron
ACAAGTGTAGTACAGTGAGA+GGG 0.657147 1.4:-10210870 MS.gene021549:CDS
AACCGGTGGTGATGAAGATG+AGG 0.659341 1.4:+10212995 None:intergenic
AAAGACCGCCGATATACCAC+CGG 0.663684 1.4:-10211059 MS.gene021549:CDS
GCGACACCAGCTATCTCCGG+CGG 0.665830 1.4:-10212624 MS.gene021549:CDS
CTCGTCCGGTGGTATATCGG+CGG 0.695312 1.4:+10211054 None:intergenic
GAAGCGTTAACGGGAAACAA+GGG 0.708559 1.4:-10212671 MS.gene021549:CDS
AAATCGAGTGTCATGCTGTG+TGG 0.710920 1.4:+10212828 None:intergenic
TGTACCTTCTCTTGACACAG+TGG 0.717082 1.4:+10212514 None:intergenic
AGATGAGGAGGAATGAACCG+GGG 0.738996 1.4:+10213010 None:intergenic
CACCGGACGAGTACTCATGG+CGG 0.773189 1.4:-10211042 MS.gene021549:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTAGAAATAAAGAAA+GGG - chr1.4:10211787-10211806 MS.gene021549:intron 10.0%
!! CAAATATAGAAATAAATTAT+TGG - chr1.4:10212146-10212165 MS.gene021549:intron 10.0%
!!! ATATATTTTTGATTTTTGAT+TGG - chr1.4:10211739-10211758 MS.gene021549:intron 10.0%
!! CATTAATTAGAAATAAAGAA+AGG - chr1.4:10211786-10211805 MS.gene021549:intron 15.0%
!! GTAAAAATATCAAAATTGTT+AGG + chr1.4:10211685-10211704 None:intergenic 15.0%
!!! AACAATTTTGATATTTTTAC+CGG - chr1.4:10211685-10211704 MS.gene021549:intron 15.0%
!!! ATATCATTTTATTCAAGTTT+TGG - chr1.4:10212406-10212425 MS.gene021549:intron 15.0%
!!! ATTTTTGTTCAGAAAAAATA+GGG - chr1.4:10212831-10212850 MS.gene021549:CDS 15.0%
!!! TTAAAAAACATTTCTTCTTT+TGG - chr1.4:10212224-10212243 MS.gene021549:intron 15.0%
!! ATAATAGTCAACATAGTTAA+CGG + chr1.4:10213004-10213023 None:intergenic 20.0%
!! ATGAGTTCAAATTAAATTGA+GGG - chr1.4:10212356-10212375 MS.gene021549:intron 20.0%
!! CATAAGTCATAATCAAAAAT+GGG + chr1.4:10212339-10212358 None:intergenic 20.0%
!! TATGAGTTCAAATTAAATTG+AGG - chr1.4:10212355-10212374 MS.gene021549:intron 20.0%
!! TCATAAGTCATAATCAAAAA+TGG + chr1.4:10212340-10212359 None:intergenic 20.0%
!! TTTGTCATTATGTTAATCTA+CGG + chr1.4:10211591-10211610 None:intergenic 20.0%
!!! CTTTTTGTTCATCTATTTTT+GGG + chr1.4:10210749-10210768 None:intergenic 20.0%
!!! GATTTTTGTTCAGAAAAAAT+AGG - chr1.4:10212830-10212849 MS.gene021549:CDS 20.0%
!!! TAGTAATGTTTTAGTTAACT+TGG - chr1.4:10212669-10212688 MS.gene021549:CDS 20.0%
!!! TCTTTAACTTTTAAATGCAT+TGG - chr1.4:10212189-10212208 MS.gene021549:intron 20.0%
!!! TTATTCTTTCTTTTAATCAG+AGG - chr1.4:10213049-10213068 MS.gene021549:CDS 20.0%
! AAACGTTAATGCATGTAATA+GGG + chr1.4:10211660-10211679 None:intergenic 25.0%
! AACATTACTATGATCTTATG+CGG + chr1.4:10212659-10212678 None:intergenic 25.0%
! ATAAATCAACGTTAGAAAAC+AGG + chr1.4:10213033-10213052 None:intergenic 25.0%
! ATTCAAAGGTAAACTCTAAA+AGG + chr1.4:10211496-10211515 None:intergenic 25.0%
! TAGAAATAAAGAAAGGGAAA+AGG - chr1.4:10211793-10211812 MS.gene021549:intron 25.0%
! TGTGGTTAAAATGCTTTAAT+AGG - chr1.4:10211898-10211917 MS.gene021549:intron 25.0%
!! GCTTTTTGTTCATCTATTTT+TGG + chr1.4:10210750-10210769 None:intergenic 25.0%
!!! AATCATTAATTTGTGCCTTA+AGG + chr1.4:10212126-10212145 None:intergenic 25.0%
!!! AATTTTGATATTTTTACCGG+TGG - chr1.4:10211688-10211707 MS.gene021549:intron 25.0%
!!! ATCATTAATTTGTGCCTTAA+GGG + chr1.4:10212125-10212144 None:intergenic 25.0%
!!! ATCCTATTTTGAATTACTTC+AGG + chr1.4:10212455-10212474 None:intergenic 25.0%
!!! GAGTTTTTTGAACTTAGAAA+CGG + chr1.4:10210874-10210893 None:intergenic 25.0%
!!! TCCTATTTTGAATTACTTCA+GGG + chr1.4:10212454-10212473 None:intergenic 25.0%
!!! TTTTAGAGTTTACCTTTGAA+TGG - chr1.4:10211495-10211514 MS.gene021549:intron 25.0%
AAAACATTCATGGTCATTCA+TGG + chr1.4:10212634-10212653 None:intergenic 30.0%
AAAGAAAGGGAAAAGGTTAA+TGG - chr1.4:10211800-10211819 MS.gene021549:intron 30.0%
AAGTTAAGTTAGACCTAGAT+TGG - chr1.4:10212589-10212608 MS.gene021549:CDS 30.0%
ACCCTGAAGTAATTCAAAAT+AGG - chr1.4:10212450-10212469 MS.gene021549:intron 30.0%
AGTATTTCCCATATTCCAAT+TGG + chr1.4:10212711-10212730 None:intergenic 30.0%
AGTCAAAGCAATTAAGTGAA+GGG + chr1.4:10212057-10212076 None:intergenic 30.0%
AGTTGAGTGTTTAATTGAGT+TGG + chr1.4:10210840-10210859 None:intergenic 30.0%
ATTATGTTAATCTACGGAGT+AGG + chr1.4:10211585-10211604 None:intergenic 30.0%
CAAACGTTAATGCATGTAAT+AGG + chr1.4:10211661-10211680 None:intergenic 30.0%
TAAGTGAAGGGAATTGAAAA+AGG + chr1.4:10212045-10212064 None:intergenic 30.0%
TTTATGTCATCTGCTATTAC+TGG - chr1.4:10211248-10211267 MS.gene021549:intron 30.0%
!! ATCACTTGTATGAGTTTTGA+TGG + chr1.4:10211617-10211636 None:intergenic 30.0%
AAAATAGGATCCCATGAGTT+AGG - chr1.4:10212465-10212484 MS.gene021549:intron 35.0%
AAATAGGATCCCATGAGTTA+GGG - chr1.4:10212466-10212485 MS.gene021549:intron 35.0%
ACATACTTTAACCTAACCAC+CGG + chr1.4:10211707-10211726 None:intergenic 35.0%
ACTCCTATCCAATTGGAATA+TGG - chr1.4:10212700-10212719 MS.gene021549:CDS 35.0%
AGAGTTTACCTTTGAATGGA+AGG - chr1.4:10211499-10211518 MS.gene021549:intron 35.0%
ATCTCTTTACTTAACCGAAC+CGG - chr1.4:10210894-10210913 MS.gene021549:intron 35.0%
ATTGAGTGAAACGCAGATAA+AGG + chr1.4:10211467-10211486 None:intergenic 35.0%
ATTGTGTATAACTCTTACCG+TGG + chr1.4:10212967-10212986 None:intergenic 35.0%
CAGTCAAAGCAATTAAGTGA+AGG + chr1.4:10212058-10212077 None:intergenic 35.0%
CTCCTATCCAATTGGAATAT+GGG - chr1.4:10212701-10212720 MS.gene021549:CDS 35.0%
GAAAGTGACAAGACAACATA+GGG - chr1.4:10211934-10211953 MS.gene021549:intron 35.0%
GTGAACGAGTCAAACAAAAA+AGG + chr1.4:10211767-10211786 None:intergenic 35.0%
GTTAGGTTAAAGTATGTGGA+CGG - chr1.4:10211710-10211729 MS.gene021549:intron 35.0%
TATAACTCTTACCGTGGATA+TGG + chr1.4:10212961-10212980 None:intergenic 35.0%
TCAGAAAAAATAGGGTGAAG+AGG - chr1.4:10212839-10212858 MS.gene021549:CDS 35.0%
TGAAAGTGACAAGACAACAT+AGG - chr1.4:10211933-10211952 MS.gene021549:intron 35.0%
TGAACAAAAAGCCATACAAG+AGG - chr1.4:10210758-10210777 MS.gene021549:CDS 35.0%
TTATGCGGTCAAAACATTCA+TGG + chr1.4:10212644-10212663 None:intergenic 35.0%
TTCCCATATTCCAATTGGAT+AGG + chr1.4:10212706-10212725 None:intergenic 35.0%
! ACGTTTTACTCCTATCCAAT+TGG - chr1.4:10212693-10212712 MS.gene021549:CDS 35.0%
! ATGCTGATTGTAACGTATGA+AGG - chr1.4:10213145-10213164 MS.gene021549:CDS 35.0%
! ATGGTCGTTCGTTTAAAATC+GGG + chr1.4:10212615-10212634 None:intergenic 35.0%
! CATGGTCGTTCGTTTAAAAT+CGG + chr1.4:10212616-10212635 None:intergenic 35.0%
! TCATGACACCTTTTCTTAGA+CGG + chr1.4:10211371-10211390 None:intergenic 35.0%
! TGCTGATTGTAACGTATGAA+GGG - chr1.4:10213146-10213165 MS.gene021549:CDS 35.0%
! TGTTTCTGATGTCCAATATG+TGG - chr1.4:10211522-10211541 MS.gene021549:intron 35.0%
! TTTTGAACTTAGAAACGGTG+TGG + chr1.4:10210869-10210888 None:intergenic 35.0%
!! AAGAAAAGGTGTCATGATCA+TGG - chr1.4:10211374-10211393 MS.gene021549:intron 35.0%
!! AATGTTAACTTGTGCCCTTA+AGG - chr1.4:10212108-10212127 MS.gene021549:intron 35.0%
!! ATTGAGTTGGTTGATGAGAA+AGG + chr1.4:10210827-10210846 None:intergenic 35.0%
!! TGATATTTTTACCGGTGGTT+AGG - chr1.4:10211693-10211712 MS.gene021549:intron 35.0%
!! TTGAGTTGGTTGATGAGAAA+GGG + chr1.4:10210826-10210845 None:intergenic 35.0%
!!! AAAGTGTTTTGGTAGAGACA+GGG + chr1.4:10211024-10211043 None:intergenic 35.0%
AAATACCAAACCCACAATCC+CGG + chr1.4:10213215-10213234 None:intergenic 40.0%
AACATTCCGATGACGTTTCA+GGG - chr1.4:10211399-10211418 MS.gene021549:intron 40.0%
ACAAGTGTAGTACAGTGAGA+GGG - chr1.4:10213077-10213096 MS.gene021549:CDS 40.0%
ACTACGAAACCCTAACTCAT+GGG + chr1.4:10212478-10212497 None:intergenic 40.0%
ATCAGAAGGACTCAAAGGTA+TGG - chr1.4:10210785-10210804 MS.gene021549:CDS 40.0%
ATTTCTTAACATGTGCCCCA+AGG - chr1.4:10212247-10212266 MS.gene021549:intron 40.0%
CAGAAACACCTTCCATTCAA+AGG + chr1.4:10211510-10211529 None:intergenic 40.0%
CTCAAACACGAAAAACTCCA+TGG - chr1.4:10211169-10211188 MS.gene021549:intron 40.0%
GCTGATTGTAACGTATGAAG+GGG - chr1.4:10213147-10213166 MS.gene021549:CDS 40.0%
GGGATGGGTGCATTAAATAA+AGG + chr1.4:10212290-10212309 None:intergenic 40.0%
GGTGGTTAGGTTAAAGTATG+TGG - chr1.4:10211706-10211725 MS.gene021549:intron 40.0%
TACAAGTGTAGTACAGTGAG+AGG - chr1.4:10213076-10213095 MS.gene021549:CDS 40.0%
TACGTTACAATCAGCATCGT+TGG + chr1.4:10213142-10213161 None:intergenic 40.0%
TCATCTGCTATTACTGGTGA+TGG - chr1.4:10211254-10211273 MS.gene021549:intron 40.0%
TCGCAAACACTACCACATAT+TGG + chr1.4:10211537-10211556 None:intergenic 40.0%
TTTCTTAACATGTGCCCCAA+GGG - chr1.4:10212248-10212267 MS.gene021549:intron 40.0%
! AAACGCAGATAAAGGAGTGT+AGG + chr1.4:10211459-10211478 None:intergenic 40.0%
! ACGTTTGGAGTCAACGATTT+CGG - chr1.4:10211869-10211888 MS.gene021549:intron 40.0%
! ACTATTTTGCTAACATGCGC+TGG + chr1.4:10212312-10212331 None:intergenic 40.0%
! CTATTTTGCTAACATGCGCT+GGG + chr1.4:10212311-10212330 None:intergenic 40.0%
! GTTTAAAATCGGGCCAATCT+AGG + chr1.4:10212605-10212624 None:intergenic 40.0%
! TATTTTGCTAACATGCGCTG+GGG + chr1.4:10212310-10212329 None:intergenic 40.0%
! TTCGATTTTTCTCAACCCAG+CGG - chr1.4:10211301-10211320 MS.gene021549:intron 40.0%
!! ATAGTGTTAACTTGTGCCCT+TGG + chr1.4:10212267-10212286 None:intergenic 40.0%
!! TAGTGTTAACTTGTGCCCTT+GGG + chr1.4:10212266-10212285 None:intergenic 40.0%
!! TTGGTTGATGAGAAAGGGTT+AGG + chr1.4:10210821-10210840 None:intergenic 40.0%
!!! GAAAGTGTTTTGGTAGAGAC+AGG + chr1.4:10211025-10211044 None:intergenic 40.0%
AAATCGAGTGTCATGCTGTG+TGG + chr1.4:10211122-10211141 None:intergenic 45.0%
AAGATGAGGAGGAATGAACC+GGG + chr1.4:10210941-10210960 None:intergenic 45.0%
AATCAGCATCGTTGGATCGT+CGG + chr1.4:10213134-10213153 None:intergenic 45.0%
ACGTGAATTTGTCGTGTGAG+TGG - chr1.4:10211837-10211856 MS.gene021549:intron 45.0%
ATACAAGAGGCTGCATCAGA+AGG - chr1.4:10210771-10210790 MS.gene021549:CDS 45.0%
ATACGGTCAGAAACCGATCA+AGG - chr1.4:10212930-10212949 MS.gene021549:CDS 45.0%
ATTCGACCCTGAAACGTCAT+CGG + chr1.4:10211408-10211427 None:intergenic 45.0%
CGAGAATTCAAGCTCAACCA+TGG + chr1.4:10211189-10211208 None:intergenic 45.0%
CGTGAATTTGTCGTGTGAGT+GGG - chr1.4:10211838-10211857 MS.gene021549:intron 45.0%
GAACATTCCGATGACGTTTC+AGG - chr1.4:10211398-10211417 MS.gene021549:intron 45.0%
GAACTTAGAAACGGTGTGGT+CGG + chr1.4:10210865-10210884 None:intergenic 45.0%
GAAGATGAGGAGGAATGAAC+CGG + chr1.4:10210942-10210961 None:intergenic 45.0%
GACTACGAAACCCTAACTCA+TGG + chr1.4:10212479-10212498 None:intergenic 45.0%
GATTCAATCCACTCCTTCAC+CGG - chr1.4:10210986-10211005 MS.gene021549:intron 45.0%
GGATATGGTGATCCCTTGAT+CGG + chr1.4:10212946-10212965 None:intergenic 45.0%
GGTTGAGCTTGAATTCTCGA+AGG - chr1.4:10211190-10211209 MS.gene021549:intron 45.0%
GTGAATTTGTCGTGTGAGTG+GGG - chr1.4:10211839-10211858 MS.gene021549:intron 45.0%
TACGGTCAGAAACCGATCAA+GGG - chr1.4:10212931-10212950 MS.gene021549:CDS 45.0%
TCAAGGGATCACCATATCCA+CGG - chr1.4:10212947-10212966 MS.gene021549:CDS 45.0%
TGAATCTGAACCGGTTGAAC+CGG + chr1.4:10210972-10210991 None:intergenic 45.0%
TGTACCTTCTCTTGACACAG+TGG + chr1.4:10211436-10211455 None:intergenic 45.0%
TTCTGATGCAGCCTCTTGTA+TGG + chr1.4:10210772-10210791 None:intergenic 45.0%
! GAAGCGTTAACGGGAAACAA+GGG - chr1.4:10211276-10211295 MS.gene021549:intron 45.0%
! GAGTACTCATGGCGGAAATA+CGG - chr1.4:10212913-10212932 MS.gene021549:CDS 45.0%
! TTTGGAGTCAACGATTTCGG+TGG - chr1.4:10211872-10211891 MS.gene021549:intron 45.0%
!! ACTGGTGATGGAAGCGTTAA+CGG - chr1.4:10211266-10211285 MS.gene021549:intron 45.0%
!! AGTGTTAACTTGTGCCCTTG+GGG + chr1.4:10212265-10212284 None:intergenic 45.0%
!! GGAGTGGATTGAATCTGAAC+CGG + chr1.4:10210981-10211000 None:intergenic 45.0%
!!! GACGGAGAAGGAAAGTGTTT+TGG + chr1.4:10211035-10211054 None:intergenic 45.0%
!!! TGTTTTGGTAGAGACAGGGT+TGG + chr1.4:10211020-10211039 None:intergenic 45.0%
!!! ATTTTTTGTTAATTTATTTA+AGG - chr1.4:10212083-10212102 MS.gene021549:intron 5.0%
!!! TTTTTTGTTAATTTATTTAA+GGG - chr1.4:10212084-10212103 MS.gene021549:intron 5.0%
AAAGACCGCCGATATACCAC+CGG - chr1.4:10212888-10212907 MS.gene021549:CDS 50.0%
AGATGAGGAGGAATGAACCG+GGG + chr1.4:10210940-10210959 None:intergenic 50.0%
AGTGTCATGCTGTGTGGTTG+CGG + chr1.4:10211116-10211135 None:intergenic 50.0%
CTCCTCATCTTCATCACCAC+CGG - chr1.4:10210950-10210969 MS.gene021549:intron 50.0%
GAGCTCAAAACGACGTCGTT+TGG + chr1.4:10211152-10211171 None:intergenic 50.0%
GCGGTCTTTGAACTTATCGC+CGG + chr1.4:10212877-10212896 None:intergenic 50.0%
GCTCAACGTGTTTCCTTGCT+GGG + chr1.4:10213105-10213124 None:intergenic 50.0%
GCTGCATCAGAAGGACTCAA+AGG - chr1.4:10210780-10210799 MS.gene021549:CDS 50.0%
GTACTCGTCCGGTGGTATAT+CGG + chr1.4:10212899-10212918 None:intergenic 50.0%
TGTTTGAACCGGTGAAGGAG+TGG + chr1.4:10210997-10211016 None:intergenic 50.0%
TTTGTCGTGTGAGTGGGGTA+TGG - chr1.4:10211844-10211863 MS.gene021549:intron 50.0%
! AACCGGTGGTGATGAAGATG+AGG + chr1.4:10210955-10210974 None:intergenic 50.0%
! AGTGCCACTGTGTCAAGAGA+AGG - chr1.4:10211429-10211448 MS.gene021549:intron 50.0%
! GAAGAGGACTGTGAGAGTAC+CGG - chr1.4:10212855-10212874 MS.gene021549:CDS 50.0%
! GTTGGTGTTTGAACCGGTGA+AGG + chr1.4:10211002-10211021 None:intergenic 50.0%
!! CTGGTGATGGAAGCGTTAAC+GGG - chr1.4:10211267-10211286 MS.gene021549:intron 50.0%
!! GACAGGGTTGGTGTTTGAAC+CGG + chr1.4:10211008-10211027 None:intergenic 50.0%
!! GGAAGCGTTAACGGGAAACA+AGG - chr1.4:10211275-10211294 MS.gene021549:intron 50.0%
!! TTCATCACCACCGGTTCAAC+CGG - chr1.4:10210959-10210978 MS.gene021549:intron 50.0%
ATCTGAACCGGTTGAACCGG+TGG + chr1.4:10210969-10210988 None:intergenic 55.0%
CACGATTCAAGCTGCGATGC+AGG - chr1.4:10213180-10213199 MS.gene021549:CDS 55.0%
CGCTCAACGTGTTTCCTTGC+TGG + chr1.4:10213106-10213125 None:intergenic 55.0%
GAGAACGCATCCGGGATTGT+GGG - chr1.4:10213202-10213221 MS.gene021549:CDS 55.0%
GAGTGGGGTATGGCTACGTT+TGG - chr1.4:10211854-10211873 MS.gene021549:intron 55.0%
GGAGTCAACGATTTCGGTGG+TGG - chr1.4:10211875-10211894 MS.gene021549:intron 55.0%
TACCACCGGACGAGTACTCA+TGG - chr1.4:10212902-10212921 MS.gene021549:CDS 55.0%
TGCGGTTGAACAAAGCTCGC+CGG + chr1.4:10211098-10211117 None:intergenic 55.0%
TGCTAACATGCGCTGGGGAT+GGG + chr1.4:10212305-10212324 None:intergenic 55.0%
TTCCGCCATGAGTACTCGTC+CGG + chr1.4:10212910-10212929 None:intergenic 55.0%
TTGCTAACATGCGCTGGGGA+TGG + chr1.4:10212306-10212325 None:intergenic 55.0%
! CAACGATTTCGGTGGTGGTG+TGG - chr1.4:10211880-10211899 MS.gene021549:intron 55.0%
! CGGTGGTGATGAAGATGAGG+AGG + chr1.4:10210952-10210971 None:intergenic 55.0%
CACCGGACGAGTACTCATGG+CGG - chr1.4:10212905-10212924 MS.gene021549:CDS 60.0%
CGATGCAGGAGAACGCATCC+GGG - chr1.4:10213194-10213213 MS.gene021549:CDS 60.0%
CGCATCCGGGATTGTGGGTT+TGG - chr1.4:10213207-10213226 MS.gene021549:CDS 60.0%
CTCGTCCGGTGGTATATCGG+CGG + chr1.4:10212896-10212915 None:intergenic 60.0%
GCGATGCAGGAGAACGCATC+CGG - chr1.4:10213193-10213212 MS.gene021549:CDS 60.0%
GGAGAACGCATCCGGGATTG+TGG - chr1.4:10213201-10213220 MS.gene021549:CDS 60.0%
TCCGTCACCTGCACTGTCAC+CGG - chr1.4:10211049-10211068 MS.gene021549:CDS 60.0%
TTAACCGAACCGGTCACGCC+CGG - chr1.4:10210904-10210923 MS.gene021549:intron 60.0%
TTAGACGGCACCGCCGATAG+CGG + chr1.4:10211356-10211375 None:intergenic 60.0%
! GGTTTTCCGCCGGAGATAGC+TGG + chr1.4:10211332-10211351 None:intergenic 60.0%
!! AGATAGCTGGTGTCGCCGCT+GGG + chr1.4:10211319-10211338 None:intergenic 60.0%
!! CGGCGGTGCCGTCTAAGAAA+AGG - chr1.4:10211360-10211379 MS.gene021549:intron 60.0%
!! GACAGTGCAGGTGACGGAGA+AGG + chr1.4:10211047-10211066 None:intergenic 60.0%
AATCTCCGTGCGTCACGCGC+CGG - chr1.4:10211076-10211095 MS.gene021549:CDS 65.0%
CGCCATGAGTACTCGTCCGG+TGG + chr1.4:10212907-10212926 None:intergenic 65.0%
CGGAAAACCGCCGCTATCGG+CGG - chr1.4:10211343-10211362 MS.gene021549:intron 65.0%
CGGCGGAAAACCGCCGCTAT+CGG - chr1.4:10211340-10211359 MS.gene021549:intron 65.0%
GCCGGTGACAGTGCAGGTGA+CGG + chr1.4:10211053-10211072 None:intergenic 65.0%
GCGACACCAGCTATCTCCGG+CGG - chr1.4:10211323-10211342 MS.gene021549:intron 65.0%
GCGGCGACACCAGCTATCTC+CGG - chr1.4:10211320-10211339 MS.gene021549:intron 65.0%
TGAACCGGGCGTGACCGGTT+CGG + chr1.4:10210911-10210930 None:intergenic 65.0%
TGACGCACGGAGATTGGCGC+CGG + chr1.4:10211071-10211090 None:intergenic 65.0%
!! ATTGGCGCCGGTGACAGTGC+AGG + chr1.4:10211059-10211078 None:intergenic 65.0%
!! CAGTGAGAGGGTGCCCAGCA+AGG - chr1.4:10213089-10213108 MS.gene021549:CDS 65.0%
!! CGATAGCGGCGGTTTTCCGC+CGG + chr1.4:10211342-10211361 None:intergenic 65.0%
!! GAGATAGCTGGTGTCGCCGC+TGG + chr1.4:10211320-10211339 None:intergenic 65.0%
AACCGGGGCGCGTCTGAACC+GGG + chr1.4:10210925-10210944 None:intergenic 70.0%
GAACCGGGGCGCGTCTGAAC+CGG + chr1.4:10210926-10210945 None:intergenic 70.0%
GCGTCTGAACCGGGCGTGAC+CGG + chr1.4:10210916-10210935 None:intergenic 70.0%
GGCGCGTGACGCACGGAGAT+TGG + chr1.4:10211077-10211096 None:intergenic 70.0%
! GACGGCACCGCCGATAGCGG+CGG + chr1.4:10211353-10211372 None:intergenic 75.0%
! CGCCCGGTTCAGACGCGCCC+CGG - chr1.4:10210920-10210939 MS.gene021549:intron 80.0%
! GCTCGCCGGCGCGTGACGCA+CGG + chr1.4:10211084-10211103 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 10210723 10213246 10210723 ID=MS.gene021549
chr1.4 mRNA 10210723 10213246 10210723 ID=MS.gene021549.t1;Parent=MS.gene021549
chr1.4 exon 10212519 10213246 10212519 ID=MS.gene021549.t1.exon1;Parent=MS.gene021549.t1
chr1.4 CDS 10212519 10213246 10212519 ID=cds.MS.gene021549.t1;Parent=MS.gene021549.t1
chr1.4 exon 10211001 10211126 10211001 ID=MS.gene021549.t1.exon2;Parent=MS.gene021549.t1
chr1.4 CDS 10211001 10211126 10211001 ID=cds.MS.gene021549.t1;Parent=MS.gene021549.t1
chr1.4 exon 10210723 10210900 10210723 ID=MS.gene021549.t1.exon3;Parent=MS.gene021549.t1
chr1.4 CDS 10210723 10210900 10210723 ID=cds.MS.gene021549.t1;Parent=MS.gene021549.t1
Gene Sequence

>MS.gene021549

ATGGCAGTGGAACTCATGGGGTTCCCAAAAATAGATGAACAAAAAGCCATACAAGAGGCTGCATCAGAAGGACTCAAAGGTATGGAACACTTGATCCTAACCCTTTCTCATCAACCAACTCAATTAAACACTCAACTAACCGACCACACCGTTTCTAAGTTCAAAAAACTCATCTCTTTACTTAACCGAACCGGTCACGCCCGGTTCAGACGCGCCCCGGTTCATTCCTCCTCATCTTCATCACCACCGGTTCAACCGGTTCAGATTCAATCCACTCCTTCACCGGTTCAAACACCAACCCTGTCTCTACCAAAACACTTTCCTTCTCCGTCACCTGCACTGTCACCGGCGCCAATCTCCGTGCGTCACGCGCCGGCGAGCTTTGTTCAACCGCAACCACACAGCATGACACTCGATTTCACGAAGCCAAACGACGTCGTTTTGAGCTCAAACACGAAAAACTCCATGGTTGAGCTTGAATTCTCGAAGGATACAGCAACGTTTAGCGTTTCTTCAGCTTCATCGTTTATGTCATCTGCTATTACTGGTGATGGAAGCGTTAACGGGAAACAAGGGTCTTCGATTTTTCTCAACCCAGCGGCGACACCAGCTATCTCCGGCGGAAAACCGCCGCTATCGGCGGTGCCGTCTAAGAAAAGGTGTCATGATCATGGTGAACATTCCGATGACGTTTCAGGGTCGAATAAGTGCCACTGTGTCAAGAGAAGGTACACCTACACTCCTTTATCTGCGTTTCACTCAATTATAATCCTTTTAGAGTTTACCTTTGAATGGAAGGTGTTTCTGATGTCCAATATGTGGTAGTGTTTGCGACAATCAATGATAATATTTTTTTTTTCCTACTCCGTAGATTAACATAATGACAAATAACCATCAAAACTCATACAAGTGATAAAACAACAAAGACTCGTAACCCTATTACATGCATTAACGTTTGTCCTAACAATTTTGATATTTTTACCGGTGGTTAGGTTAAAGTATGTGGACGGTCATGTATATATTTTTGATTTTTGATTGGAGCCTTTTTTGTTTGACTCGTTCACATTAATTAGAAATAAAGAAAGGGAAAAGGTTAATGGTTTCTTAACGAATCACGTGAATTTGTCGTGTGAGTGGGGTATGGCTACGTTTGGAGTCAACGATTTCGGTGGTGGTGTGGTTAAAATGCTTTAATAGGTAACAGTGTGCTTGAAAGTGACAAGACAACATAGGGTTCTGTTTTTGCTGTCTGAGAAAGAAAACACTAGAGAGAAATTCAAAAGTTCAAACAAAGTTAAAGTGATGTGAACTCTCTTTTTCCTTTTTCAATTCCCTTCACTTAATTGCTTTGACTGTTGACATTTTTTGTTAATTTATTTAAGGGAAATGTTAACTTGTGCCCTTAAGGCACAAATTAATGATTCAAATATAGAAATAAATTATTGGAATGTGTGCATTTTATTTAGTCTTTAACTTTTAAATGCATTGGATGCACAAAATTTTAAAAAACATTTCTTCTTTTGGATTTCTTAACATGTGCCCCAAGGGCACAAGTTAACACTATCCTTTATTTAATGCACCCATCCCCAGCGCATGTTAGCAAAATAGTGTAACCCATTTTTGATTATGACTTATGAGTTCAAATTAAATTGAGGGATAATAAGATTTTAATTTTTGTGTATCATATCATTTTATTCAAGTTTTGGAGTACTGTAGTCACTCTTTTGACCCTGAAGTAATTCAAAATAGGATCCCATGAGTTAGGGTTTCGTAGTCACATAGTCAGAACATCGATGATCATTTAGATTGTAGATATGAAAATACAAATTTCAATTTTTATTTTACAATTCAATGTACAGAGCTTAGAAGTTAAGTTAGACCTAGATTGGCCCGATTTTAAACGAACGACCATGAATGACCATGAATGTTTTGACCGCATAAGATCATAGTAATGTTTTAGTTAACTTGGAACGTTTTACTCCTATCCAATTGGAATATGGGAAATACTTATGATTTATTTATTCATTATAATCATGATTGCAATATTGAATTCATTCATTATGATTATACTGTAATATTGAACAGAAGTATCAAGTTTCTTGAATTTGATTTTTGTTCAGAAAAAATAGGGTGAAGAGGACTGTGAGAGTACCGGCGATAAGTTCAAAGACCGCCGATATACCACCGGACGAGTACTCATGGCGGAAATACGGTCAGAAACCGATCAAGGGATCACCATATCCACGGTAAGAGTTATACACAATCAATCTAAGCTCGACCGTTAACTATGTTGACTATTATTAAAGACCTGTTTTCTAACGTTGATTTATTCTTTCTTTTAATCAGAGGCTATTACAAGTGTAGTACAGTGAGAGGGTGCCCAGCAAGGAAACACGTTGAGCGTGCAACCGACGATCCAACGATGCTGATTGTAACGTATGAAGGGGAGCACAGACACACGATTCAAGCTGCGATGCAGGAGAACGCATCCGGGATTGTGGGTTTGGTATTTGAGTCAACGTAA
Protein sequence

>MS.gene021549.t1

MAVELMGFPKIDEQKAIQEAASEGLKGMEHLILTLSHQPTQLNTQLTDHTVSKFKKLISLLNRTGHARFRRAPVHSSSSSSPPVQPVQIQSTPSPVQTPTLSLPKHFPSPSPALSPAPISVRHAPASFVQPQPHSMTLDFTKPNDVVLSSNTKNSMVELEFSKDTATFSVSSASSFMSSAITGDGSVNGKQGSSIFLNPAATPAISGGKPPLSAVPSKKRCHDHGEHSDDVSGSNKCHCVKRRKNRVKRTVRVPAISSKTADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERATDDPTMLIVTYEGEHRHTIQAAMQENASGIVGLVFEST