Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022992.t1 | XP_024627233.1 | 88.5 | 514 | 45 | 3 | 1 | 500 | 1 | 514 | 2.20E-201 | 711.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022992.t1 | Q9FME2 | 40.3 | 380 | 194 | 6 | 1 | 369 | 1 | 358 | 7.9e-59 | 229.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022992.t1 | A0A396H244 | 88.5 | 514 | 45 | 3 | 1 | 500 | 1 | 514 | 1.6e-201 | 711.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene063501 | MS.gene022992 | PPI |
| MS.gene044455 | MS.gene022992 | PPI |
| MS.gene044456 | MS.gene022992 | PPI |
| MS.gene033053 | MS.gene022992 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022992.t1 | MTR_7g055610 | 91.406 | 512 | 32 | 3 | 1 | 500 | 8 | 519 | 0.0 | 914 |
| MS.gene022992.t1 | MTR_7g057520 | 91.406 | 512 | 32 | 3 | 1 | 500 | 1 | 512 | 0.0 | 913 |
| MS.gene022992.t1 | MTR_4g109640 | 40.897 | 379 | 187 | 10 | 10 | 371 | 12 | 370 | 2.31e-75 | 242 |
| MS.gene022992.t1 | MTR_4g109640 | 40.849 | 377 | 186 | 10 | 10 | 369 | 12 | 368 | 2.58e-74 | 242 |
| MS.gene022992.t1 | MTR_4g109640 | 41.240 | 371 | 181 | 10 | 10 | 363 | 12 | 362 | 7.73e-74 | 238 |
| MS.gene022992.t1 | MTR_7g013840 | 39.740 | 385 | 186 | 9 | 10 | 369 | 12 | 375 | 1.25e-73 | 241 |
| MS.gene022992.t1 | MTR_4g083150 | 36.864 | 491 | 233 | 14 | 1 | 446 | 1 | 459 | 1.34e-73 | 240 |
| MS.gene022992.t1 | MTR_7g013840 | 39.637 | 386 | 186 | 9 | 10 | 369 | 12 | 376 | 2.01e-73 | 240 |
| MS.gene022992.t1 | MTR_7g098440 | 31.429 | 455 | 251 | 17 | 15 | 425 | 13 | 450 | 3.35e-41 | 154 |
| MS.gene022992.t1 | MTR_1g045800 | 29.973 | 367 | 206 | 11 | 8 | 344 | 7 | 352 | 2.29e-33 | 131 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022992.t1 | AT3G25150 | 43.110 | 508 | 226 | 14 | 7 | 490 | 8 | 476 | 3.84e-103 | 318 |
| MS.gene022992.t1 | AT3G25150 | 43.110 | 508 | 226 | 14 | 7 | 490 | 107 | 575 | 2.74e-102 | 318 |
| MS.gene022992.t1 | AT5G60980 | 40.209 | 383 | 189 | 6 | 1 | 369 | 1 | 357 | 1.62e-68 | 227 |
| MS.gene022992.t1 | AT5G60980 | 40.209 | 383 | 189 | 6 | 1 | 369 | 1 | 357 | 1.62e-68 | 227 |
| MS.gene022992.t1 | AT5G60980 | 40.104 | 384 | 189 | 6 | 1 | 369 | 1 | 358 | 1.97e-68 | 227 |
| MS.gene022992.t1 | AT5G60980 | 40.104 | 384 | 189 | 6 | 1 | 369 | 1 | 358 | 1.97e-68 | 227 |
| MS.gene022992.t1 | AT5G48650 | 37.500 | 424 | 218 | 12 | 12 | 399 | 13 | 425 | 4.02e-65 | 218 |
| MS.gene022992.t1 | AT1G13730 | 32.619 | 420 | 222 | 13 | 1 | 400 | 1 | 379 | 2.64e-47 | 170 |
| MS.gene022992.t1 | AT1G13730 | 32.619 | 420 | 222 | 13 | 1 | 400 | 1 | 379 | 2.64e-47 | 170 |
| MS.gene022992.t1 | AT2G03640 | 31.365 | 491 | 250 | 18 | 3 | 476 | 2 | 422 | 1.30e-43 | 159 |
| MS.gene022992.t1 | AT1G69250 | 31.938 | 454 | 254 | 17 | 1 | 446 | 1 | 407 | 2.54e-43 | 159 |
| MS.gene022992.t1 | AT2G03640 | 30.957 | 491 | 251 | 17 | 3 | 476 | 2 | 421 | 2.36e-42 | 156 |
| MS.gene022992.t1 | AT2G03640 | 30.957 | 491 | 251 | 17 | 3 | 476 | 2 | 421 | 2.36e-42 | 156 |
| MS.gene022992.t1 | AT2G03640 | 30.957 | 491 | 251 | 17 | 3 | 476 | 2 | 421 | 2.36e-42 | 156 |
| MS.gene022992.t1 | AT2G03640 | 34.444 | 360 | 190 | 13 | 3 | 353 | 2 | 324 | 1.72e-40 | 152 |
| MS.gene022992.t1 | AT1G69250 | 33.065 | 372 | 208 | 13 | 1 | 368 | 1 | 335 | 1.13e-39 | 148 |
| MS.gene022992.t1 | AT5G43960 | 30.334 | 389 | 220 | 11 | 15 | 369 | 11 | 382 | 2.15e-32 | 129 |
| MS.gene022992.t1 | AT3G07250 | 31.443 | 388 | 204 | 16 | 10 | 381 | 3 | 344 | 3.12e-31 | 128 |
| MS.gene022992.t1 | AT5G43960 | 30.640 | 297 | 159 | 8 | 106 | 369 | 41 | 323 | 3.17e-24 | 104 |
| MS.gene022992.t1 | AT3G55540 | 33.600 | 125 | 77 | 4 | 15 | 133 | 32 | 156 | 6.19e-13 | 70.5 |
| MS.gene022992.t1 | AT3G24463 | 35.922 | 103 | 62 | 4 | 13 | 111 | 9 | 111 | 2.30e-11 | 62.0 |
Find 138 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGAAGGCCACTCAGTTTC+AGG | 0.164891 | 7.2:-49095612 | MS.gene022992:CDS |
| TCTTCGGCACTTCTTCAATT+TGG | 0.175338 | 7.2:+49097904 | None:intergenic |
| AATAGCCGTTCAGACTTTAA+TGG | 0.204493 | 7.2:-49095454 | MS.gene022992:CDS |
| GAAGTCTACAATCCAGAAAA+TGG | 0.212664 | 7.2:-49098056 | MS.gene022992:CDS |
| ATACTAGAACCATTTGTTTC+AGG | 0.227152 | 7.2:+49097526 | None:intergenic |
| CTTCGGCACTTCTTCAATTT+GGG | 0.237490 | 7.2:+49097905 | None:intergenic |
| GGAGTCATTGTCTTGGTCAC+TGG | 0.284606 | 7.2:-49098421 | MS.gene022992:CDS |
| GAGAATATGTTCAAGAAGTT+TGG | 0.285207 | 7.2:-49097277 | MS.gene022992:CDS |
| GGAAGAGGGGAATATGGATA+TGG | 0.296622 | 7.2:-49095433 | MS.gene022992:CDS |
| TTTAATGGAAGAGGGGAATA+TGG | 0.309866 | 7.2:-49095439 | MS.gene022992:CDS |
| ATCTACCACTGCTCGTGTTC+CGG | 0.316044 | 7.2:-49095284 | MS.gene022992:CDS |
| GGCAGAGGGCATGGAAACTA+TGG | 0.318726 | 7.2:-49095631 | MS.gene022992:CDS |
| ACACGAGCAGTGGTAGATTT+AGG | 0.324177 | 7.2:+49095289 | None:intergenic |
| GAGTCATTGTCTTGGTCACT+GGG | 0.328550 | 7.2:-49098420 | MS.gene022992:CDS |
| TATGGAAATAGCCGAAGTTT+TGG | 0.332929 | 7.2:-49095562 | MS.gene022992:CDS |
| TGGACACCGCCACTCTTGAT+AGG | 0.341350 | 7.2:+49097253 | None:intergenic |
| GCAAGAGGGCATGGAAACTA+TGG | 0.365956 | 7.2:-49095580 | MS.gene022992:CDS |
| GTGGATGCACAAGAGTCTTT+TGG | 0.375158 | 7.2:-49098448 | MS.gene022992:CDS |
| GCTGCTTTCTGTGAATCATT+AGG | 0.376741 | 7.2:+49097978 | None:intergenic |
| TACACAGAAGGTAGCTGAAT+TGG | 0.396416 | 7.2:-49097931 | MS.gene022992:CDS |
| ATACCTTTGCTGTCCTAACT+TGG | 0.400943 | 7.2:+49097233 | None:intergenic |
| AGGGCATGTGTAGCAGTTCC+AGG | 0.407057 | 7.2:+49097304 | None:intergenic |
| TCAACAAGAACCTCAGAAAC+AGG | 0.415714 | 7.2:+49098005 | None:intergenic |
| TAAAACCTATGCACATGCTC+AGG | 0.418125 | 7.2:+49099111 | None:intergenic |
| GGGAATATGGATATGGGTAT+AGG | 0.421991 | 7.2:-49095426 | MS.gene022992:CDS |
| TGGGTATAGGAATGGCAATC+GGG | 0.424405 | 7.2:-49095413 | MS.gene022992:CDS |
| CACAGAAGCAGCTGTCATTA+CGG | 0.429670 | 7.2:+49097609 | None:intergenic |
| AGCATCATGTTACCATTCTC+AGG | 0.433770 | 7.2:+49098241 | None:intergenic |
| ATGGGTATAGGAATGGCAAT+CGG | 0.436524 | 7.2:-49095414 | MS.gene022992:CDS |
| TTCCTTGCTCCTCAAGAGAA+AGG | 0.437287 | 7.2:-49098349 | MS.gene022992:CDS |
| TGACTGCTGAGGATGGTGAT+AGG | 0.438498 | 7.2:-49098088 | MS.gene022992:CDS |
| AGTGTTGGATCCTCCTGTGC+TGG | 0.440145 | 7.2:-49098138 | MS.gene022992:CDS |
| AGAGTGGCGGTGTCCAAGTT+AGG | 0.440879 | 7.2:-49097246 | MS.gene022992:CDS |
| CCGATGATACCATCTGGTTC+AGG | 0.443109 | 7.2:+49099063 | None:intergenic |
| TTGGTCACTGGGTTTATGAT+AGG | 0.445866 | 7.2:-49098409 | MS.gene022992:CDS |
| GACCGAGCTTACTGACATCT+TGG | 0.456560 | 7.2:+49099088 | None:intergenic |
| AACAGTCGTGGAGACTATAA+TGG | 0.461729 | 7.2:-49095490 | MS.gene022992:CDS |
| AACAGTCGTGGAGACTATAA+TGG | 0.461729 | 7.2:-49095526 | MS.gene022992:CDS |
| CGTTCAGACTTTAATGGAAG+AGG | 0.468224 | 7.2:-49095448 | MS.gene022992:CDS |
| ATGGAGGCATATGATTTCTT+CGG | 0.469501 | 7.2:+49097888 | None:intergenic |
| GCCACTCAGTTTCAGGGATG+AGG | 0.470258 | 7.2:-49095605 | MS.gene022992:CDS |
| ATTTATTTGAGAGGGCTGCC+TGG | 0.473653 | 7.2:-49097322 | MS.gene022992:CDS |
| ACTCTTGTGCATCCACAGAT+AGG | 0.475539 | 7.2:+49098455 | None:intergenic |
| TTCTGTTCAGGTTATGGCAG+AGG | 0.481492 | 7.2:-49095646 | MS.gene022992:CDS |
| AAGTCTACAATCCAGAAAAT+GGG | 0.483272 | 7.2:-49098055 | MS.gene022992:CDS |
| GGAGATCCAATGTCATGATC+AGG | 0.484436 | 7.2:+49098271 | None:intergenic |
| TGTTGATGAAAATGAAATCA+AGG | 0.484974 | 7.2:-49098296 | MS.gene022992:CDS |
| TGACAAGAAGATACTGTCAA+TGG | 0.484996 | 7.2:-49098503 | MS.gene022992:CDS |
| GATGAGGGAGCAAGAGGGCA+TGG | 0.486475 | 7.2:-49095589 | MS.gene022992:CDS |
| GTTTATCAGGGATTTCACTT+TGG | 0.487116 | 7.2:-49097133 | MS.gene022992:intron |
| TCTCCTGCCTCTCCTGAGAA+TGG | 0.504733 | 7.2:-49098253 | MS.gene022992:intron |
| ACAAAGTAGCCTTTCTCTTG+AGG | 0.505893 | 7.2:+49098340 | None:intergenic |
| GCTACCTTCTGTGTATCATC+AGG | 0.507667 | 7.2:+49097939 | None:intergenic |
| GGAACTTGTGTCTCCAGCAC+AGG | 0.507872 | 7.2:+49098125 | None:intergenic |
| ATAGATATACATACAACATC+AGG | 0.509761 | 7.2:+49099436 | None:intergenic |
| GCAGTCACAGATATTTGCTC+TGG | 0.513035 | 7.2:+49098104 | None:intergenic |
| GAAGAGGGGAATATGGATAT+GGG | 0.513469 | 7.2:-49095432 | MS.gene022992:CDS |
| TTACCATTCTCAGGAGAGGC+AGG | 0.514038 | 7.2:+49098250 | None:intergenic |
| TGGAAGGCCACTCAGTTTCA+GGG | 0.515875 | 7.2:-49095611 | MS.gene022992:CDS |
| TCAGGTTATGGCAGAGGGCA+TGG | 0.518859 | 7.2:-49095640 | MS.gene022992:CDS |
| TCCAGTGTGCCTGAAACAAA+TGG | 0.519573 | 7.2:-49097535 | MS.gene022992:CDS |
| TACCAAGATGTCAGTAAGCT+CGG | 0.526213 | 7.2:-49099090 | MS.gene022992:CDS |
| TTCAGAGAATCAAGTTCCTC+CGG | 0.526348 | 7.2:-49099461 | MS.gene022992:CDS |
| GCTATTCAATTTATTTGAGA+GGG | 0.527276 | 7.2:-49097330 | MS.gene022992:CDS |
| AATGATTCACAGAAAGCAGC+TGG | 0.531023 | 7.2:-49097975 | MS.gene022992:CDS |
| GGCTATTCAATTTATTTGAG+AGG | 0.531523 | 7.2:-49097331 | MS.gene022992:CDS |
| GACAAGAAGATACTGTCAAT+GGG | 0.533669 | 7.2:-49098502 | MS.gene022992:CDS |
| ACCATTTGTTTCAGGCACAC+TGG | 0.537368 | 7.2:+49097534 | None:intergenic |
| GTTCAGACTTTAATGGAAGA+GGG | 0.540785 | 7.2:-49095447 | MS.gene022992:CDS |
| CGTGTTCCGGCCTCTGCTTG+AGG | 0.544497 | 7.2:-49095271 | None:intergenic |
| TCTGTTCAGGTTATGGCAGA+GGG | 0.545340 | 7.2:-49095645 | MS.gene022992:CDS |
| AGTGGCCGCATGAATCGTAC+TGG | 0.546281 | 7.2:-49095334 | MS.gene022992:CDS |
| AGTACGATTCATGCGGCCAC+TGG | 0.547213 | 7.2:+49095336 | None:intergenic |
| GTAGCTTAAGGTAATGAAAG+AGG | 0.550794 | 7.2:-49097647 | MS.gene022992:intron |
| AGTCTCCACGGCCAAAACTT+CGG | 0.551552 | 7.2:+49095551 | None:intergenic |
| GCCGCATGAATCGTACTGGC+GGG | 0.551714 | 7.2:-49095330 | MS.gene022992:CDS |
| TCTAGTATAAGTACTAATGA+AGG | 0.557933 | 7.2:-49097511 | MS.gene022992:CDS |
| TATGGATATGGGTATAGGAA+TGG | 0.558422 | 7.2:-49095421 | MS.gene022992:CDS |
| AAGGAACCTGATCATGACAT+TGG | 0.558690 | 7.2:-49098277 | MS.gene022992:CDS |
| AGAGGCCGGAACACGAGCAG+TGG | 0.559072 | 7.2:+49095279 | None:intergenic |
| TAGCTTCCTCAAGCAGAGGC+CGG | 0.560957 | 7.2:+49095265 | None:intergenic |
| TTCAGGGATGAGGGAGCAAG+AGG | 0.562453 | 7.2:-49095595 | MS.gene022992:CDS |
| CCACTCAGTTTCAGGGATGA+GGG | 0.563881 | 7.2:-49095604 | MS.gene022992:CDS |
| GACTGCTGAGGATGGTGATA+GGG | 0.564877 | 7.2:-49098087 | MS.gene022992:CDS |
| AGTATAAGTACTAATGAAGG+TGG | 0.568379 | 7.2:-49097508 | MS.gene022992:CDS |
| CTCTTCCATTAAAGTCTGAA+CGG | 0.573202 | 7.2:+49095449 | None:intergenic |
| CCTGAACCAGATGGTATCAT+CGG | 0.573611 | 7.2:-49099063 | MS.gene022992:CDS |
| TTTGTTTCAGGCACACTGGA+TGG | 0.574807 | 7.2:+49097538 | None:intergenic |
| GGCCGCATGAATCGTACTGG+CGG | 0.577176 | 7.2:-49095331 | MS.gene022992:CDS |
| AGCCTTTCTCTTGAGGAGCA+AGG | 0.578397 | 7.2:+49098347 | None:intergenic |
| GGACACCGCCACTCTTGATA+GGG | 0.579408 | 7.2:+49097254 | None:intergenic |
| GCAAGTGTCTGTTGAAGAAG+AGG | 0.582143 | 7.2:-49098033 | MS.gene022992:CDS |
| AAAACCTATGCACATGCTCA+GGG | 0.586213 | 7.2:+49099112 | None:intergenic |
| GGGTATAGGAATGGCAATCG+GGG | 0.586798 | 7.2:-49095412 | MS.gene022992:CDS |
| AGAGGAAGCTCCTGTTTCTG+AGG | 0.590853 | 7.2:-49098015 | MS.gene022992:CDS |
| CACTGGGTTTATGATAGGAA+AGG | 0.597377 | 7.2:-49098404 | MS.gene022992:CDS |
| CGTGGAGACTATAATGGCCG+CGG | 0.602209 | 7.2:-49095484 | MS.gene022992:CDS |
| CGTGGAGACTATAATGGCCG+CGG | 0.602209 | 7.2:-49095520 | MS.gene022992:CDS |
| ACTTGTGTCTCCAGCACAGG+AGG | 0.604167 | 7.2:+49098128 | None:intergenic |
| TCTTGAACATATTCTCAACA+AGG | 0.606195 | 7.2:+49097284 | None:intergenic |
| GCAGCTGTCATTACGGAGGA+CGG | 0.611765 | 7.2:+49097616 | None:intergenic |
| CCCTCATCCCTGAAACTGAG+TGG | 0.612765 | 7.2:+49095604 | None:intergenic |
| CACGACTGTTATAGTCTCCA+CGG | 0.614892 | 7.2:+49095539 | None:intergenic |
| ATACATACAACATCAGGTGC+CGG | 0.615319 | 7.2:+49099442 | None:intergenic |
| GCAAATATCTGTGACTGCTG+AGG | 0.616027 | 7.2:-49098099 | MS.gene022992:CDS |
| GTGATGCCGATGATACCATC+TGG | 0.617679 | 7.2:+49099057 | None:intergenic |
| TGCTGCGCTAAGTGCAATCG+AGG | 0.621802 | 7.2:-49097086 | MS.gene022992:intron |
| ATATCTGTGACTGCTGAGGA+TGG | 0.626749 | 7.2:-49098095 | MS.gene022992:CDS |
| CGCGGAGACTATAACAGTCG+TGG | 0.630267 | 7.2:-49095502 | MS.gene022992:CDS |
| TTCAGACTTTAATGGAAGAG+GGG | 0.635546 | 7.2:-49095446 | MS.gene022992:CDS |
| TAGTGCGGAGATCCTATCTG+TGG | 0.636226 | 7.2:-49098467 | MS.gene022992:CDS |
| AAAGCCCTGAGCATGTGCAT+AGG | 0.637108 | 7.2:-49099116 | MS.gene022992:CDS |
| GGAAACAATCAAGAAACTGA+AGG | 0.637783 | 7.2:-49097487 | MS.gene022992:intron |
| CTCGGTCGTCCTGAACCAGA+TGG | 0.638160 | 7.2:-49099072 | MS.gene022992:CDS |
| TGTTCCTGATGATACACAGA+AGG | 0.641677 | 7.2:-49097943 | MS.gene022992:CDS |
| GGAAGAGACTCTTACAATGG+AGG | 0.644795 | 7.2:+49097872 | None:intergenic |
| CATGTTACCATTCTCAGGAG+AGG | 0.648742 | 7.2:+49098246 | None:intergenic |
| GGGTTATAGTGAACTTAGTG+CGG | 0.649351 | 7.2:-49098482 | MS.gene022992:CDS |
| TCAGGGATGAGGGAGCAAGA+GGG | 0.650471 | 7.2:-49095594 | MS.gene022992:CDS |
| AAGTTTGGCCCTATCAAGAG+TGG | 0.651104 | 7.2:-49097262 | MS.gene022992:CDS |
| TATAGGAATGGCAATCGGGG+AGG | 0.652840 | 7.2:-49095409 | MS.gene022992:CDS |
| CTTGAACATATTCTCAACAA+GGG | 0.657058 | 7.2:+49097285 | None:intergenic |
| CATCGGCATCACAACTACAA+TGG | 0.657270 | 7.2:-49099046 | MS.gene022992:CDS |
| GAGGGCATGGAAACTATGGA+AGG | 0.657762 | 7.2:-49095627 | MS.gene022992:CDS |
| CGTGGAGACTATAACAGTCG+TGG | 0.663202 | 7.2:-49095538 | MS.gene022992:CDS |
| AATGATCACATGGGAACCAG+TGG | 0.667641 | 7.2:-49095352 | MS.gene022992:CDS |
| ATATCAGAGAAATGATCACA+TGG | 0.669840 | 7.2:-49095362 | MS.gene022992:CDS |
| TGTATAGCTTCCTCAAGCAG+AGG | 0.677594 | 7.2:+49095261 | None:intergenic |
| TGTCCAAGTTAGGACAGCAA+AGG | 0.677658 | 7.2:-49097236 | MS.gene022992:intron |
| TCAGGCACACTGGATGGTGA+AGG | 0.681317 | 7.2:+49097544 | None:intergenic |
| ATAGTAGTACTGTTCAACAA+AGG | 0.683995 | 7.2:+49099149 | None:intergenic |
| TTTGGCCCTATCAAGAGTGG+CGG | 0.685024 | 7.2:-49097259 | MS.gene022992:CDS |
| ACCCGCCAGTACGATTCATG+CGG | 0.688659 | 7.2:+49095329 | None:intergenic |
| TATCAGAGAAATGATCACAT+GGG | 0.696631 | 7.2:-49095361 | MS.gene022992:CDS |
| CATACAACATCAGGTGCCGG+AGG | 0.709159 | 7.2:+49099445 | None:intergenic |
| AGAAGCAGCTGTCATTACGG+AGG | 0.730010 | 7.2:+49097612 | None:intergenic |
| AACGGCTATTGAAGTCTCCG+CGG | 0.748532 | 7.2:+49095467 | None:intergenic |
| CACGACTGTTATAGTCTCCG+CGG | 0.755967 | 7.2:+49095503 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATACATATACATATATATA+TGG | + | chr7.2:49097290-49097309 | None:intergenic | 10.0% |
| !! | TTAAAAAAAACAAAAAAACA+GGG | + | chr7.2:49097549-49097568 | None:intergenic | 10.0% |
| !! | TTTAAAAAAAACAAAAAAAC+AGG | + | chr7.2:49097550-49097569 | None:intergenic | 10.0% |
| !!! | AATAAAATGTTTTTAAAACT+TGG | - | chr7.2:49098531-49098550 | MS.gene022992:intron | 10.0% |
| !!! | TTTATTATGTTATATTTTGT+GGG | - | chr7.2:49098858-49098877 | MS.gene022992:intron | 10.0% |
| !!! | TTTTATTATGTTATATTTTG+TGG | - | chr7.2:49098857-49098876 | MS.gene022992:intron | 10.0% |
| !! | AACTTAGATTCTAATAAATA+TGG | - | chr7.2:49096108-49096127 | MS.gene022992:intron | 15.0% |
| !! | ATGATAACTATGAAATTTAT+TGG | - | chr7.2:49098335-49098354 | MS.gene022992:CDS | 15.0% |
| !! | TGATAACTATGAAATTTATT+GGG | - | chr7.2:49098336-49098355 | MS.gene022992:CDS | 15.0% |
| !!! | CTTTAATTTGTATCTTTATT+TGG | - | chr7.2:49098156-49098175 | MS.gene022992:intron | 15.0% |
| !!! | TTATTATGTTATATTTTGTG+GGG | - | chr7.2:49098859-49098878 | MS.gene022992:intron | 15.0% |
| !! | TAACATTTACAATGAAAACT+CGG | + | chr7.2:49096936-49096955 | None:intergenic | 20.0% |
| !! | TAGAATCTAAGTTAACAAAT+GGG | + | chr7.2:49096101-49096120 | None:intergenic | 20.0% |
| !! | TATTTATTGATGTGTTCAAT+TGG | - | chr7.2:49097369-49097388 | MS.gene022992:intron | 20.0% |
| !! | TTAGAATCTAAGTTAACAAA+TGG | + | chr7.2:49096102-49096121 | None:intergenic | 20.0% |
| !!! | ATAACTTTTTGGCATATTAA+TGG | - | chr7.2:49097586-49097605 | MS.gene022992:CDS | 20.0% |
| !!! | ATGCTTTTTTATTTGGTTTT+TGG | - | chr7.2:49098072-49098091 | MS.gene022992:CDS | 20.0% |
| !!! | ATTTTTAATGTGATTGGTTT+AGG | - | chr7.2:49095561-49095580 | MS.gene022992:CDS | 20.0% |
| !!! | GTTTTAAAAAGGATACAAAA+TGG | - | chr7.2:49098723-49098742 | MS.gene022992:intron | 20.0% |
| !!! | TAACTTTTTGGCATATTAAT+GGG | - | chr7.2:49097587-49097606 | MS.gene022992:CDS | 20.0% |
| ! | AAAAGTTATCACAACAAAGT+TGG | + | chr7.2:49098840-49098859 | None:intergenic | 25.0% |
| ! | AAGATATTGTACAAACCAAT+TGG | + | chr7.2:49095874-49095893 | None:intergenic | 25.0% |
| ! | AATAAGCAACTTAAGTTAAC+AGG | + | chr7.2:49096568-49096587 | None:intergenic | 25.0% |
| ! | AGAAATCTCTTTACAACTTA+TGG | + | chr7.2:49098396-49098415 | None:intergenic | 25.0% |
| ! | ATAGATATACATACAACATC+AGG | + | chr7.2:49095309-49095328 | None:intergenic | 25.0% |
| ! | GCTATTCAATTTATTTGAGA+GGG | - | chr7.2:49097412-49097431 | MS.gene022992:intron | 25.0% |
| ! | TCAATATTCATATCTCCAAT+TGG | - | chr7.2:49095856-49095875 | MS.gene022992:intron | 25.0% |
| ! | TCTAGTATAAGTACTAATGA+AGG | - | chr7.2:49097231-49097250 | MS.gene022992:intron | 25.0% |
| !! | AATACTTTTATCTGCATTTC+AGG | - | chr7.2:49098184-49098203 | MS.gene022992:intron | 25.0% |
| !! | TGTTGATGAAAATGAAATCA+AGG | - | chr7.2:49096446-49096465 | MS.gene022992:intron | 25.0% |
| !! | TTATTATTTTCCTCTGTAAC+TGG | - | chr7.2:49097062-49097081 | MS.gene022992:intron | 25.0% |
| !!! | AGTGCTTTTTTATTTAGTAC+TGG | - | chr7.2:49098273-49098292 | MS.gene022992:CDS | 25.0% |
| !!! | CTCTGAAATAATTTCTTTCT+GGG | + | chr7.2:49098986-49099005 | None:intergenic | 25.0% |
| !!! | TAATATGCTTTTTTGTAGCT+GGG | + | chr7.2:49098782-49098801 | None:intergenic | 25.0% |
| !!! | TGACTGATTTTTAATGTGAT+TGG | - | chr7.2:49095555-49095574 | MS.gene022992:CDS | 25.0% |
| AAAAAGGATTTAACCCTCTA+CGG | + | chr7.2:49098029-49098048 | None:intergenic | 30.0% | |
| AAAACACTCAATAGTGTACA+AGG | + | chr7.2:49098681-49098700 | None:intergenic | 30.0% | |
| AAATCCTTGTACACTATTGA+GGG | - | chr7.2:49098674-49098693 | MS.gene022992:intron | 30.0% | |
| AAATTTATTGGGTTCGTGTA+TGG | - | chr7.2:49098347-49098366 | MS.gene022992:CDS | 30.0% | |
| AAGAAATTACACCAATGCAT+AGG | + | chr7.2:49095955-49095974 | None:intergenic | 30.0% | |
| AAGTCTACAATCCAGAAAAT+GGG | - | chr7.2:49096687-49096706 | MS.gene022992:intron | 30.0% | |
| AATATCACTATGATAAACGC+AGG | + | chr7.2:49097353-49097372 | None:intergenic | 30.0% | |
| AATCGCTATTTGACAACATT+GGG | - | chr7.2:49095494-49095513 | MS.gene022992:CDS | 30.0% | |
| AATTTCACTGTAGAACAAGA+TGG | + | chr7.2:49097783-49097802 | None:intergenic | 30.0% | |
| ACTGGATTATGTTGTCTTTA+AGG | - | chr7.2:49098003-49098022 | MS.gene022992:CDS | 30.0% | |
| AGTATAAGTACTAATGAAGG+TGG | - | chr7.2:49097234-49097253 | MS.gene022992:intron | 30.0% | |
| ATACTAGAACCATTTGTTTC+AGG | + | chr7.2:49097219-49097238 | None:intergenic | 30.0% | |
| ATAGTAGTACTGTTCAACAA+AGG | + | chr7.2:49095596-49095615 | None:intergenic | 30.0% | |
| ATATCACTATGATAAACGCA+GGG | + | chr7.2:49097352-49097371 | None:intergenic | 30.0% | |
| ATATCAGAGAAATGATCACA+TGG | - | chr7.2:49099380-49099399 | MS.gene022992:intron | 30.0% | |
| CAAATACAATGAGAACTTAG+TGG | + | chr7.2:49097932-49097951 | None:intergenic | 30.0% | |
| CACCATTTCTCATAATTACA+GGG | - | chr7.2:49098474-49098493 | MS.gene022992:CDS | 30.0% | |
| CACTAAGTTCTCATTGTATT+TGG | - | chr7.2:49097930-49097949 | MS.gene022992:CDS | 30.0% | |
| CATGTGCAGAAATAGTAATT+TGG | + | chr7.2:49098318-49098337 | None:intergenic | 30.0% | |
| CCAGAAAGAAATTATTTCAG+AGG | - | chr7.2:49098984-49099003 | MS.gene022992:intron | 30.0% | |
| CTACATGCAAATGAATAGAA+AGG | + | chr7.2:49097872-49097891 | None:intergenic | 30.0% | |
| CTTGAACATATTCTCAACAA+GGG | + | chr7.2:49097460-49097479 | None:intergenic | 30.0% | |
| CTTTATAGCTGTCTATGTAT+TGG | - | chr7.2:49095770-49095789 | MS.gene022992:intron | 30.0% | |
| GAGAATATGTTCAAGAAGTT+TGG | - | chr7.2:49097465-49097484 | MS.gene022992:intron | 30.0% | |
| GGCTATTCAATTTATTTGAG+AGG | - | chr7.2:49097411-49097430 | MS.gene022992:intron | 30.0% | |
| GTTAACAAATGGGAATTTAG+AGG | + | chr7.2:49096091-49096110 | None:intergenic | 30.0% | |
| TAAATCCTTGTACACTATTG+AGG | - | chr7.2:49098700-49098719 | MS.gene022992:intron | 30.0% | |
| TAACCATGTTGTAATACTCT+TGG | - | chr7.2:49095908-49095927 | MS.gene022992:intron | 30.0% | |
| TAATCGCTATTTGACAACAT+TGG | - | chr7.2:49095493-49095512 | MS.gene022992:CDS | 30.0% | |
| TACACTAGTTGTTGAACAAA+AGG | + | chr7.2:49098582-49098601 | None:intergenic | 30.0% | |
| TACCCTGTAATTATGAGAAA+TGG | + | chr7.2:49098479-49098498 | None:intergenic | 30.0% | |
| TATATATCCAGAGCAATGTT+CGG | + | chr7.2:49095993-49096012 | None:intergenic | 30.0% | |
| TATCAACTCCATAATGTCTT+TGG | + | chr7.2:49098506-49098525 | None:intergenic | 30.0% | |
| TATCAGAGAAATGATCACAT+GGG | - | chr7.2:49099381-49099400 | MS.gene022992:intron | 30.0% | |
| TATTCTTGACTCTATTACAC+TGG | - | chr7.2:49096963-49096982 | MS.gene022992:intron | 30.0% | |
| TCTTGAACATATTCTCAACA+AGG | + | chr7.2:49097461-49097480 | None:intergenic | 30.0% | |
| TTAAAGACAACATAATCCAG+TGG | + | chr7.2:49098004-49098023 | None:intergenic | 30.0% | |
| ! | AAACTTTTGGCATACAACTA+GGG | - | chr7.2:49099019-49099038 | MS.gene022992:intron | 30.0% |
| ! | TACTGGTTAATTTCACATCA+AGG | - | chr7.2:49098290-49098309 | MS.gene022992:CDS | 30.0% |
| ! | TTATATTTTGTGGGGTTCAT+TGG | - | chr7.2:49098867-49098886 | MS.gene022992:intron | 30.0% |
| ! | TTTTCAAATAACGCCTATAG+CGG | + | chr7.2:49095422-49095441 | None:intergenic | 30.0% |
| !! | AAAAGCATCAGCAAGTAATT+AGG | + | chr7.2:49096045-49096064 | None:intergenic | 30.0% |
| !! | AAGTCTCAAAGGTATTGATT+TGG | - | chr7.2:49098608-49098627 | MS.gene022992:intron | 30.0% |
| !! | CCTCTGAAATAATTTCTTTC+TGG | + | chr7.2:49098987-49099006 | None:intergenic | 30.0% |
| !! | GCATATTAATGGGTTTATCA+GGG | - | chr7.2:49097597-49097616 | MS.gene022992:CDS | 30.0% |
| !! | TTAATGTGATTGGTTTAGGT+TGG | - | chr7.2:49095565-49095584 | MS.gene022992:CDS | 30.0% |
| !!! | CACTATTGAGGGTTTTAAAA+AGG | - | chr7.2:49098712-49098731 | MS.gene022992:intron | 30.0% |
| !!! | CACTTCGATGCTTTTTTATT+TGG | - | chr7.2:49098065-49098084 | MS.gene022992:CDS | 30.0% |
| !!! | GTAATATGCTTTTTTGTAGC+TGG | + | chr7.2:49098783-49098802 | None:intergenic | 30.0% |
| !!! | TTAAGGCGTGGTTTTATTAA+GGG | - | chr7.2:49096523-49096542 | MS.gene022992:intron | 30.0% |
| !!! | TTGATTTGGTCACTTTTTGA+TGG | - | chr7.2:49098622-49098641 | MS.gene022992:intron | 30.0% |
| AAAACCCTCAATAGTGTACA+AGG | + | chr7.2:49098708-49098727 | None:intergenic | 35.0% | |
| AAAATGCACACAAGAACCAA+AGG | + | chr7.2:49095821-49095840 | None:intergenic | 35.0% | |
| AATAGCCGTTCAGACTTTAA+TGG | - | chr7.2:49099288-49099307 | MS.gene022992:intron | 35.0% | |
| AGAAAGGAAGAGGGAATTTA+TGG | + | chr7.2:49096894-49096913 | None:intergenic | 35.0% | |
| ATTTGCATGTAGTGTTTGTG+TGG | - | chr7.2:49097880-49097899 | MS.gene022992:intron | 35.0% | |
| CATACAATGTTGTGAATCGT+GGG | - | chr7.2:49095344-49095363 | MS.gene022992:CDS | 35.0% | |
| CCACCATTTCTCATAATTAC+AGG | - | chr7.2:49098473-49098492 | MS.gene022992:CDS | 35.0% | |
| CCAGGACACATGAAAATTAA+GGG | + | chr7.2:49097956-49097975 | None:intergenic | 35.0% | |
| CCTGTAATTATGAGAAATGG+TGG | + | chr7.2:49098476-49098495 | None:intergenic | 35.0% | |
| CTAGTTGTATGCCAAAAGTT+TGG | + | chr7.2:49099020-49099039 | None:intergenic | 35.0% | |
| CTCTTCCATTAAAGTCTGAA+CGG | + | chr7.2:49099296-49099315 | None:intergenic | 35.0% | |
| GAAGTCTACAATCCAGAAAA+TGG | - | chr7.2:49096686-49096705 | MS.gene022992:intron | 35.0% | |
| GAATGGTAACATGATGCTTA+AGG | - | chr7.2:49096506-49096525 | MS.gene022992:intron | 35.0% | |
| GAATTTAGAGGATCGTACAA+TGG | + | chr7.2:49096079-49096098 | None:intergenic | 35.0% | |
| GACAAGAAGATACTGTCAAT+GGG | - | chr7.2:49096240-49096259 | MS.gene022992:intron | 35.0% | |
| GGAAACAATCAAGAAACTGA+AGG | - | chr7.2:49097255-49097274 | MS.gene022992:CDS | 35.0% | |
| GGTGGACAGAAATTTATTGA+AGG | + | chr7.2:49098458-49098477 | None:intergenic | 35.0% | |
| GTAGCTTAAGGTAATGAAAG+AGG | - | chr7.2:49097095-49097114 | MS.gene022992:CDS | 35.0% | |
| GTTCAGACTTTAATGGAAGA+GGG | - | chr7.2:49099295-49099314 | MS.gene022992:intron | 35.0% | |
| GTTTATCAGGGATTTCACTT+TGG | - | chr7.2:49097609-49097628 | MS.gene022992:CDS | 35.0% | |
| TAAAGAGATTTCTCTCACAC+TGG | - | chr7.2:49098403-49098422 | MS.gene022992:CDS | 35.0% | |
| TATGGAAGAGACTCTTACAA+TGG | + | chr7.2:49096876-49096895 | None:intergenic | 35.0% | |
| TATGGATATGGGTATAGGAA+TGG | - | chr7.2:49099321-49099340 | MS.gene022992:intron | 35.0% | |
| TCATACAATGTTGTGAATCG+TGG | - | chr7.2:49095343-49095362 | MS.gene022992:CDS | 35.0% | |
| TCTTCTTTCTACAAATCCAC+AGG | - | chr7.2:49097740-49097759 | MS.gene022992:intron | 35.0% | |
| TGACAAGAAGATACTGTCAA+TGG | - | chr7.2:49096239-49096258 | MS.gene022992:intron | 35.0% | |
| TTCAGACTTTAATGGAAGAG+GGG | - | chr7.2:49099296-49099315 | MS.gene022992:intron | 35.0% | |
| TTTAATGGAAGAGGGGAATA+TGG | - | chr7.2:49099303-49099322 | MS.gene022992:intron | 35.0% | |
| TTTCTTATGCTTCTGAGTTG+TGG | - | chr7.2:49097842-49097861 | MS.gene022992:intron | 35.0% | |
| ! | ATGGAGGCATATGATTTCTT+CGG | + | chr7.2:49096857-49096876 | None:intergenic | 35.0% |
| ! | CAAACTTTTGGCATACAACT+AGG | - | chr7.2:49099018-49099037 | MS.gene022992:intron | 35.0% |
| ! | GCTGCTAGCTAATAACTTTT+TGG | - | chr7.2:49097575-49097594 | MS.gene022992:CDS | 35.0% |
| ! | GTGTAGATTTGAAGTCTCAA+AGG | - | chr7.2:49098597-49098616 | MS.gene022992:intron | 35.0% |
| ! | TATGGAAATAGCCGAAGTTT+TGG | - | chr7.2:49099180-49099199 | MS.gene022992:intron | 35.0% |
| ! | TATGGATTGAGTGTTAGAAG+TGG | - | chr7.2:49096126-49096145 | MS.gene022992:intron | 35.0% |
| ! | TGCAATCGTCTGATTTGTAT+TGG | - | chr7.2:49098107-49098126 | MS.gene022992:CDS | 35.0% |
| ! | TTATTTTCCTCTGTAACTGG+TGG | - | chr7.2:49097065-49097084 | MS.gene022992:intron | 35.0% |
| !! | CAAAACTTCTAAAATCAGCC+AGG | + | chr7.2:49097974-49097993 | None:intergenic | 35.0% |
| !! | GGCATATTAATGGGTTTATC+AGG | - | chr7.2:49097596-49097615 | MS.gene022992:CDS | 35.0% |
| !! | GTGCAATCGAGGTATTTTAT+TGG | - | chr7.2:49097667-49097686 | MS.gene022992:intron | 35.0% |
| !! | TGCATTTTCTGTTCAGGTTA+TGG | - | chr7.2:49099090-49099109 | MS.gene022992:CDS | 35.0% |
| !!! | CTTAAGGCGTGGTTTTATTA+AGG | - | chr7.2:49096522-49096541 | MS.gene022992:intron | 35.0% |
| !!! | GAAGTTTTGTTCATTACCAC+TGG | - | chr7.2:49097985-49098004 | MS.gene022992:CDS | 35.0% |
| AAAACCTATGCACATGCTCA+GGG | + | chr7.2:49095633-49095652 | None:intergenic | 40.0% | |
| AACAGTCGTGGAGACTATAA+TGG | - | chr7.2:49099216-49099235 | MS.gene022992:intron | 40.0% | |
| AAGGAACCTGATCATGACAT+TGG | - | chr7.2:49096465-49096484 | MS.gene022992:intron | 40.0% | |
| AATGATTCACAGAAAGCAGC+TGG | - | chr7.2:49096767-49096786 | MS.gene022992:intron | 40.0% | |
| ACAAAGTAGCCTTTCTCTTG+AGG | + | chr7.2:49096405-49096424 | None:intergenic | 40.0% | |
| ACACCAATGCATAGGCATAT+GGG | + | chr7.2:49095947-49095966 | None:intergenic | 40.0% | |
| ACTGTAGAACAAGATGGCAA+AGG | + | chr7.2:49097777-49097796 | None:intergenic | 40.0% | |
| AGAAAGAGCAAGAAAGGAAG+AGG | + | chr7.2:49096904-49096923 | None:intergenic | 40.0% | |
| AGCATCAGCAAGTAATTAGG+TGG | + | chr7.2:49096042-49096061 | None:intergenic | 40.0% | |
| AGCATCATGTTACCATTCTC+AGG | + | chr7.2:49096504-49096523 | None:intergenic | 40.0% | |
| ATACATACAACATCAGGTGC+CGG | + | chr7.2:49095303-49095322 | None:intergenic | 40.0% | |
| ATGGGTATAGGAATGGCAAT+CGG | - | chr7.2:49099328-49099347 | MS.gene022992:intron | 40.0% | |
| ATGTTGTGAATCGTGGGTAA+CGG | - | chr7.2:49095350-49095369 | MS.gene022992:CDS | 40.0% | |
| ATGTTGTGGTAGAGGAAAAG+AGG | - | chr7.2:49098234-49098253 | MS.gene022992:intron | 40.0% | |
| CAACTCCATAATGTCTTTGG+AGG | + | chr7.2:49098503-49098522 | None:intergenic | 40.0% | |
| CAACTTATGGCATGCAAACA+AGG | + | chr7.2:49098383-49098402 | None:intergenic | 40.0% | |
| CAATCAAGAAACTGAAGGTC+TGG | - | chr7.2:49097260-49097279 | MS.gene022992:CDS | 40.0% | |
| CACTGGGTTTATGATAGGAA+AGG | - | chr7.2:49096338-49096357 | MS.gene022992:intron | 40.0% | |
| CATCAGCAAGTAATTAGGTG+GGG | + | chr7.2:49096040-49096059 | None:intergenic | 40.0% | |
| CCTATTTCATTTCACCAAGC+AGG | - | chr7.2:49096212-49096231 | MS.gene022992:intron | 40.0% | |
| CGTTCAGACTTTAATGGAAG+AGG | - | chr7.2:49099294-49099313 | MS.gene022992:intron | 40.0% | |
| CTTCGGCACTTCTTCAATTT+GGG | + | chr7.2:49096840-49096859 | None:intergenic | 40.0% | |
| CTTCTTGTCAATTTCCTGCT+TGG | + | chr7.2:49096229-49096248 | None:intergenic | 40.0% | |
| GAAAAGAGGTCAACTAATCG+AGG | - | chr7.2:49098248-49098267 | MS.gene022992:intron | 40.0% | |
| GAAAGAGCAAGAAAGGAAGA+GGG | + | chr7.2:49096903-49096922 | None:intergenic | 40.0% | |
| GAAGAGGGGAATATGGATAT+GGG | - | chr7.2:49099310-49099329 | MS.gene022992:intron | 40.0% | |
| GAGTCTAGAAAGAGCAAGAA+AGG | + | chr7.2:49096910-49096929 | None:intergenic | 40.0% | |
| GCATCAGCAAGTAATTAGGT+GGG | + | chr7.2:49096041-49096060 | None:intergenic | 40.0% | |
| GCCAGGACACATGAAAATTA+AGG | + | chr7.2:49097957-49097976 | None:intergenic | 40.0% | |
| GGGAATATGGATATGGGTAT+AGG | - | chr7.2:49099316-49099335 | MS.gene022992:intron | 40.0% | |
| GGGTTATAGTGAACTTAGTG+CGG | - | chr7.2:49096260-49096279 | MS.gene022992:intron | 40.0% | |
| TAAAACCTATGCACATGCTC+AGG | + | chr7.2:49095634-49095653 | None:intergenic | 40.0% | |
| TACACAGAAGGTAGCTGAAT+TGG | - | chr7.2:49096811-49096830 | MS.gene022992:intron | 40.0% | |
| TACACCAATGCATAGGCATA+TGG | + | chr7.2:49095948-49095967 | None:intergenic | 40.0% | |
| TACCAAGATGTCAGTAAGCT+CGG | - | chr7.2:49095652-49095671 | MS.gene022992:CDS | 40.0% | |
| TAGTGCTATAGTTCCGCTAT+AGG | - | chr7.2:49095406-49095425 | MS.gene022992:CDS | 40.0% | |
| TCAACAAGAACCTCAGAAAC+AGG | + | chr7.2:49096740-49096759 | None:intergenic | 40.0% | |
| TCTTCGGCACTTCTTCAATT+TGG | + | chr7.2:49096841-49096860 | None:intergenic | 40.0% | |
| TGACGGTCATTGATCAGAAT+TGG | + | chr7.2:49098215-49098234 | None:intergenic | 40.0% | |
| TGCCAAAAGTTTGGCAATAC+AGG | + | chr7.2:49099011-49099030 | None:intergenic | 40.0% | |
| TGTTCCTGATGATACACAGA+AGG | - | chr7.2:49096799-49096818 | MS.gene022992:intron | 40.0% | |
| TTCAGAGAATCAAGTTCCTC+CGG | - | chr7.2:49095281-49095300 | MS.gene022992:CDS | 40.0% | |
| TTGGTCACTGGGTTTATGAT+AGG | - | chr7.2:49096333-49096352 | MS.gene022992:intron | 40.0% | |
| TTTCCTCTACCACAACATGA+CGG | + | chr7.2:49098232-49098251 | None:intergenic | 40.0% | |
| ! | ATACCTTTGCTGTCCTAACT+TGG | + | chr7.2:49097512-49097531 | None:intergenic | 40.0% |
| ! | CCCTTAATTTTCATGTGTCC+TGG | - | chr7.2:49097953-49097972 | MS.gene022992:CDS | 40.0% |
| ! | CCTGCTTGGTGAAATGAAAT+AGG | + | chr7.2:49096215-49096234 | None:intergenic | 40.0% |
| ! | GCTGCTTTCTGTGAATCATT+AGG | + | chr7.2:49096767-49096786 | None:intergenic | 40.0% |
| ! | GCTGTTTGCATTTTCTGTTC+AGG | - | chr7.2:49099084-49099103 | MS.gene022992:CDS | 40.0% |
| ! | GTCCTGTATTGCCAAACTTT+TGG | - | chr7.2:49099006-49099025 | MS.gene022992:intron | 40.0% |
| !! | GACAGCAAAGGTATTTCACT+TGG | - | chr7.2:49097518-49097537 | MS.gene022992:CDS | 40.0% |
| !! | GAGCCAAGAGTATTACAACA+TGG | + | chr7.2:49095914-49095933 | None:intergenic | 40.0% |
| !!! | GGGATTTCACTTTGGTTTTG+TGG | - | chr7.2:49097617-49097636 | MS.gene022992:CDS | 40.0% |
| !!! | TGGTTTTGTGGAGTTTGAAG+AGG | - | chr7.2:49097629-49097648 | MS.gene022992:CDS | 40.0% |
| AACAGATCCACCAGTTACAG+AGG | + | chr7.2:49097075-49097094 | None:intergenic | 45.0% | |
| AAGTTTGGCCCTATCAAGAG+TGG | - | chr7.2:49097480-49097499 | MS.gene022992:intron | 45.0% | |
| AATAGCCCTCAGCTGTCAAA+AGG | + | chr7.2:49097398-49097417 | None:intergenic | 45.0% | |
| AATGATCACATGGGAACCAG+TGG | - | chr7.2:49099390-49099409 | MS.gene022992:intron | 45.0% | |
| ACACCCATATGCCTATGCAT+TGG | - | chr7.2:49095941-49095960 | MS.gene022992:intron | 45.0% | |
| ACACGAGCAGTGGTAGATTT+AGG | + | chr7.2:49099456-49099475 | None:intergenic | 45.0% | |
| ACCATTTGTTTCAGGCACAC+TGG | + | chr7.2:49097211-49097230 | None:intergenic | 45.0% | |
| ACTCTTGTGCATCCACAGAT+AGG | + | chr7.2:49096290-49096309 | None:intergenic | 45.0% | |
| AGAACCAAAGGCTACACATG+AGG | + | chr7.2:49095809-49095828 | None:intergenic | 45.0% | |
| ATATCCAGAGCAATGTTCGG+AGG | + | chr7.2:49095990-49096009 | None:intergenic | 45.0% | |
| ATATCTGTGACTGCTGAGGA+TGG | - | chr7.2:49096647-49096666 | MS.gene022992:intron | 45.0% | |
| ATGGCATGCAAACAAGGAAC+AGG | + | chr7.2:49098377-49098396 | None:intergenic | 45.0% | |
| ATTTATTTGAGAGGGCTGCC+TGG | - | chr7.2:49097420-49097439 | MS.gene022992:intron | 45.0% | |
| CACAGAAGCAGCTGTCATTA+CGG | + | chr7.2:49097136-49097155 | None:intergenic | 45.0% | |
| CACGACTGTTATAGTCTCCA+CGG | + | chr7.2:49099206-49099225 | None:intergenic | 45.0% | |
| CATACCTCATGTGTAGCCTT+TGG | - | chr7.2:49095802-49095821 | MS.gene022992:intron | 45.0% | |
| CATCGGCATCACAACTACAA+TGG | - | chr7.2:49095696-49095715 | MS.gene022992:intron | 45.0% | |
| CATGTTACCATTCTCAGGAG+AGG | + | chr7.2:49096499-49096518 | None:intergenic | 45.0% | |
| CCAACACTGAAAGAAGGTTG+AGG | + | chr7.2:49096592-49096611 | None:intergenic | 45.0% | |
| CCTCAACCTTCTTTCAGTGT+TGG | - | chr7.2:49096589-49096608 | MS.gene022992:intron | 45.0% | |
| CCTGAACCAGATGGTATCAT+CGG | - | chr7.2:49095679-49095698 | MS.gene022992:intron | 45.0% | |
| GAGGATCCAACACTGAAAGA+AGG | + | chr7.2:49096598-49096617 | None:intergenic | 45.0% | |
| GAGTCATTGTCTTGGTCACT+GGG | - | chr7.2:49096322-49096341 | MS.gene022992:intron | 45.0% | |
| GATCAATGACCGTCATGTTG+TGG | - | chr7.2:49098220-49098239 | MS.gene022992:intron | 45.0% | |
| GCAAATATCTGTGACTGCTG+AGG | - | chr7.2:49096643-49096662 | MS.gene022992:intron | 45.0% | |
| GCAAGTGTCTGTTGAAGAAG+AGG | - | chr7.2:49096709-49096728 | MS.gene022992:intron | 45.0% | |
| GCAGTCACAGATATTTGCTC+TGG | + | chr7.2:49096641-49096660 | None:intergenic | 45.0% | |
| GCTACCTTCTGTGTATCATC+AGG | + | chr7.2:49096806-49096825 | None:intergenic | 45.0% | |
| GGAAGAGACTCTTACAATGG+AGG | + | chr7.2:49096873-49096892 | None:intergenic | 45.0% | |
| GGAAGAGGGGAATATGGATA+TGG | - | chr7.2:49099309-49099328 | MS.gene022992:intron | 45.0% | |
| GGAGATCCAATGTCATGATC+AGG | + | chr7.2:49096474-49096493 | None:intergenic | 45.0% | |
| GGTAGCCTCCAAAGACATTA+TGG | - | chr7.2:49098495-49098514 | MS.gene022992:CDS | 45.0% | |
| GGTGGATCTGTTGTAGCTTA+AGG | - | chr7.2:49097083-49097102 | MS.gene022992:intron | 45.0% | |
| GTAACATGATGCTTAAGGCG+TGG | - | chr7.2:49096511-49096530 | MS.gene022992:intron | 45.0% | |
| TCCAGTGTGCCTGAAACAAA+TGG | - | chr7.2:49097207-49097226 | MS.gene022992:intron | 45.0% | |
| TGGGTATAGGAATGGCAATC+GGG | - | chr7.2:49099329-49099348 | MS.gene022992:intron | 45.0% | |
| TGTCCAAGTTAGGACAGCAA+AGG | - | chr7.2:49097506-49097525 | MS.gene022992:CDS | 45.0% | |
| TTCCTTGCTCCTCAAGAGAA+AGG | - | chr7.2:49096393-49096412 | MS.gene022992:intron | 45.0% | |
| TTTGTTTCAGGCACACTGGA+TGG | + | chr7.2:49097207-49097226 | None:intergenic | 45.0% | |
| ! | ACAGACACTTGCCCATTTTC+TGG | + | chr7.2:49096701-49096720 | None:intergenic | 45.0% |
| ! | ATGCACAAGAGTCTTTTGGC+GGG | - | chr7.2:49096298-49096317 | MS.gene022992:intron | 45.0% |
| ! | GATGCACAAGAGTCTTTTGG+CGG | - | chr7.2:49096297-49096316 | MS.gene022992:intron | 45.0% |
| ! | GTGGATGCACAAGAGTCTTT+TGG | - | chr7.2:49096294-49096313 | MS.gene022992:intron | 45.0% |
| ! | TCTGTTCAGGTTATGGCAGA+GGG | - | chr7.2:49099097-49099116 | MS.gene022992:CDS | 45.0% |
| ! | TTCTGTTCAGGTTATGGCAG+AGG | - | chr7.2:49099096-49099115 | MS.gene022992:CDS | 45.0% |
| !! | GTTGTCTTTAAGGCCGTAGA+GGG | - | chr7.2:49098013-49098032 | MS.gene022992:CDS | 45.0% |
| !! | TCGTGGGTAACGGAAAATAG+CGG | - | chr7.2:49095360-49095379 | MS.gene022992:CDS | 45.0% |
| !! | TGTTGTCTTTAAGGCCGTAG+AGG | - | chr7.2:49098012-49098031 | MS.gene022992:CDS | 45.0% |
| !!! | CTTTTTTGTAGCTGGGTGCT+AGG | + | chr7.2:49098775-49098794 | None:intergenic | 45.0% |
| !! | TAAAAATGAAAAATAAAAAA+AGG | + | chr7.2:49098045-49098064 | None:intergenic | 5.0% |
| AAAGCCCTGAGCATGTGCAT+AGG | - | chr7.2:49095626-49095645 | MS.gene022992:CDS | 50.0% | |
| AAAGGAGCAACATGTGCCTG+TGG | + | chr7.2:49097759-49097778 | None:intergenic | 50.0% | |
| AACGGCTATTGAAGTCTCCG+CGG | + | chr7.2:49099278-49099297 | None:intergenic | 50.0% | |
| AGAAGCAGCTGTCATTACGG+AGG | + | chr7.2:49097133-49097152 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | chr7.2:49095728-49095747 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGGACTCA+CGG | + | chr7.2:49095722-49095741 | None:intergenic | 50.0% | |
| AGCCTTTCTCTTGAGGAGCA+AGG | + | chr7.2:49096398-49096417 | None:intergenic | 50.0% | |
| AGTCTCCACGGCCAAAACTT+CGG | + | chr7.2:49099194-49099213 | None:intergenic | 50.0% | |
| ATCTACCACTGCTCGTGTTC+CGG | - | chr7.2:49099458-49099477 | MS.gene022992:CDS | 50.0% | |
| ATGGAAGGCCACTCAGTTTC+AGG | - | chr7.2:49099130-49099149 | MS.gene022992:CDS | 50.0% | |
| CAAACCTCCGAACATTGCTC+TGG | - | chr7.2:49095983-49096002 | MS.gene022992:intron | 50.0% | |
| CACGACTGTTATAGTCTCCG+CGG | + | chr7.2:49099242-49099261 | None:intergenic | 50.0% | |
| CCACTCAGTTTCAGGGATGA+GGG | - | chr7.2:49099138-49099157 | MS.gene022992:CDS | 50.0% | |
| CGTGGAGACTATAACAGTCG+TGG | - | chr7.2:49099204-49099223 | MS.gene022992:intron | 50.0% | |
| GACCGAGCTTACTGACATCT+TGG | + | chr7.2:49095657-49095676 | None:intergenic | 50.0% | |
| GACTGCTGAGGATGGTGATA+GGG | - | chr7.2:49096655-49096674 | MS.gene022992:intron | 50.0% | |
| GCAAGTAATTAGGTGGGGTC+TGG | + | chr7.2:49096035-49096054 | None:intergenic | 50.0% | |
| GGAGTCATTGTCTTGGTCAC+TGG | - | chr7.2:49096321-49096340 | MS.gene022992:intron | 50.0% | |
| GGCTACACATGAGGTATGAG+AGG | + | chr7.2:49095800-49095819 | None:intergenic | 50.0% | |
| GGGTATAGGAATGGCAATCG+GGG | - | chr7.2:49099330-49099349 | MS.gene022992:intron | 50.0% | |
| GTGATGCCGATGATACCATC+TGG | + | chr7.2:49095688-49095707 | None:intergenic | 50.0% | |
| TAGTGCGGAGATCCTATCTG+TGG | - | chr7.2:49096275-49096294 | MS.gene022992:intron | 50.0% | |
| TATAGGAATGGCAATCGGGG+AGG | - | chr7.2:49099333-49099352 | MS.gene022992:intron | 50.0% | |
| TGACCGTCATGTTGTGGTAG+AGG | - | chr7.2:49098226-49098245 | MS.gene022992:intron | 50.0% | |
| TGACTGCTGAGGATGGTGAT+AGG | - | chr7.2:49096654-49096673 | MS.gene022992:intron | 50.0% | |
| TGGAAGGCCACTCAGTTTCA+GGG | - | chr7.2:49099131-49099150 | MS.gene022992:CDS | 50.0% | |
| TTACCATTCTCAGGAGAGGC+AGG | + | chr7.2:49096495-49096514 | None:intergenic | 50.0% | |
| TTTGGCCCTATCAAGAGTGG+CGG | - | chr7.2:49097483-49097502 | MS.gene022992:intron | 50.0% | |
| ! | CCGATGATACCATCTGGTTC+AGG | + | chr7.2:49095682-49095701 | None:intergenic | 50.0% |
| ! | GAGGGCATGGAAACTATGGA+AGG | - | chr7.2:49099115-49099134 | MS.gene022992:CDS | 50.0% |
| ! | GCAAGAGGGCATGGAAACTA+TGG | - | chr7.2:49099162-49099181 | MS.gene022992:CDS | 50.0% |
| ! | GGTTGCCTTTTGACAGCTGA+GGG | - | chr7.2:49097390-49097409 | MS.gene022992:intron | 50.0% |
| ! | TGCACAAGAGTCTTTTGGCG+GGG | - | chr7.2:49096299-49096318 | MS.gene022992:intron | 50.0% |
| ! | TGGTTGCCTTTTGACAGCTG+AGG | - | chr7.2:49097389-49097408 | MS.gene022992:intron | 50.0% |
| ! | TGTGGGGTTCATTGGTTGCT+TGG | - | chr7.2:49098875-49098894 | MS.gene022992:intron | 50.0% |
| !! | AATAGCCGAAGTTTTGGCCG+TGG | - | chr7.2:49099186-49099205 | MS.gene022992:intron | 50.0% |
| !! | AGAGGAAGCTCCTGTTTCTG+AGG | - | chr7.2:49096727-49096746 | MS.gene022992:intron | 50.0% |
| !! | GGAGGTTTTTCTAGTCGTGG+TGG | - | chr7.2:49099351-49099370 | MS.gene022992:intron | 50.0% |
| !! | TTTTCTAGTCGTGGTGGCGA+TGG | - | chr7.2:49099357-49099376 | MS.gene022992:intron | 50.0% |
| ACCCGCCAGTACGATTCATG+CGG | + | chr7.2:49099416-49099435 | None:intergenic | 55.0% | |
| ACTTGTGTCTCCAGCACAGG+AGG | + | chr7.2:49096617-49096636 | None:intergenic | 55.0% | |
| AGAGTGGCGGTGTCCAAGTT+AGG | - | chr7.2:49097496-49097515 | MS.gene022992:CDS | 55.0% | |
| AGGGCATGTGTAGCAGTTCC+AGG | + | chr7.2:49097441-49097460 | None:intergenic | 55.0% | |
| AGTACGATTCATGCGGCCAC+TGG | + | chr7.2:49099409-49099428 | None:intergenic | 55.0% | |
| AGTGGCCGCATGAATCGTAC+TGG | - | chr7.2:49099408-49099427 | MS.gene022992:intron | 55.0% | |
| CCCTCATCCCTGAAACTGAG+TGG | + | chr7.2:49099141-49099160 | None:intergenic | 55.0% | |
| CGCGGAGACTATAACAGTCG+TGG | - | chr7.2:49099240-49099259 | MS.gene022992:intron | 55.0% | |
| CGTGGAGACTATAATGGCCG+CGG | - | chr7.2:49099222-49099241 | MS.gene022992:intron | 55.0% | |
| GCAGCTGTCATTACGGAGGA+CGG | + | chr7.2:49097129-49097148 | None:intergenic | 55.0% | |
| GCCACTCAGTTTCAGGGATG+AGG | - | chr7.2:49099137-49099156 | MS.gene022992:CDS | 55.0% | |
| GGAACTTGTGTCTCCAGCAC+AGG | + | chr7.2:49096620-49096639 | None:intergenic | 55.0% | |
| GGACACCGCCACTCTTGATA+GGG | + | chr7.2:49097491-49097510 | None:intergenic | 55.0% | |
| TCAGGCACACTGGATGGTGA+AGG | + | chr7.2:49097201-49097220 | None:intergenic | 55.0% | |
| TCAGGGATGAGGGAGCAAGA+GGG | - | chr7.2:49099148-49099167 | MS.gene022992:CDS | 55.0% | |
| TCAGGTTATGGCAGAGGGCA+TGG | - | chr7.2:49099102-49099121 | MS.gene022992:CDS | 55.0% | |
| TCTCCTGCCTCTCCTGAGAA+TGG | - | chr7.2:49096489-49096508 | MS.gene022992:intron | 55.0% | |
| TGCTGCGCTAAGTGCAATCG+AGG | - | chr7.2:49097656-49097675 | MS.gene022992:intron | 55.0% | |
| TGGACACCGCCACTCTTGAT+AGG | + | chr7.2:49097492-49097511 | None:intergenic | 55.0% | |
| TTCAGGGATGAGGGAGCAAG+AGG | - | chr7.2:49099147-49099166 | MS.gene022992:CDS | 55.0% | |
| ! | AGTGTTGGATCCTCCTGTGC+TGG | - | chr7.2:49096604-49096623 | MS.gene022992:intron | 55.0% |
| ! | GCACAAGAGTCTTTTGGCGG+GGG | - | chr7.2:49096300-49096319 | MS.gene022992:intron | 55.0% |
| ! | GGCAGAGGGCATGGAAACTA+TGG | - | chr7.2:49099111-49099130 | MS.gene022992:CDS | 55.0% |
| !! | CATACAACATCAGGTGCCGG+AGG | + | chr7.2:49095300-49095319 | None:intergenic | 55.0% |
| !! | CGGGGAGGTTTTTCTAGTCG+TGG | - | chr7.2:49099348-49099367 | MS.gene022992:intron | 55.0% |
| CTCGGTCGTCCTGAACCAGA+TGG | - | chr7.2:49095670-49095689 | MS.gene022992:intron | 60.0% | |
| GATGAGGGAGCAAGAGGGCA+TGG | - | chr7.2:49099153-49099172 | MS.gene022992:CDS | 60.0% | |
| GGCCGCATGAATCGTACTGG+CGG | - | chr7.2:49099411-49099430 | MS.gene022992:intron | 60.0% | |
| TGGCGGGGGAGTCATTGTCT+TGG | - | chr7.2:49096314-49096333 | MS.gene022992:intron | 60.0% | |
| ! | GCCGCATGAATCGTACTGGC+GGG | - | chr7.2:49099412-49099431 | MS.gene022992:intron | 60.0% |
| AGAGGCCGGAACACGAGCAG+TGG | + | chr7.2:49099466-49099485 | None:intergenic | 65.0% | |
| CGTGTTCCGGCCTCTGCTTG+AGG | - | chr7.2:49099471-49099490 | MS.gene022992:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 49095273 | 49099491 | 49095273 | ID=MS.gene022992 |
| chr7.2 | mRNA | 49095273 | 49099491 | 49095273 | ID=MS.gene022992.t1;Parent=MS.gene022992 |
| chr7.2 | exon | 49099450 | 49099491 | 49099450 | ID=MS.gene022992.t1.exon1;Parent=MS.gene022992.t1 |
| chr7.2 | CDS | 49099450 | 49099491 | 49099450 | ID=cds.MS.gene022992.t1;Parent=MS.gene022992.t1 |
| chr7.2 | exon | 49099044 | 49099181 | 49099044 | ID=MS.gene022992.t1.exon2;Parent=MS.gene022992.t1 |
| chr7.2 | CDS | 49099044 | 49099181 | 49099044 | ID=cds.MS.gene022992.t1;Parent=MS.gene022992.t1 |
| chr7.2 | exon | 49098254 | 49098530 | 49098254 | ID=MS.gene022992.t1.exon3;Parent=MS.gene022992.t1 |
| chr7.2 | CDS | 49098254 | 49098530 | 49098254 | ID=cds.MS.gene022992.t1;Parent=MS.gene022992.t1 |
| chr7.2 | exon | 49097887 | 49098158 | 49097887 | ID=MS.gene022992.t1.exon4;Parent=MS.gene022992.t1 |
| chr7.2 | CDS | 49097887 | 49098158 | 49097887 | ID=cds.MS.gene022992.t1;Parent=MS.gene022992.t1 |
| chr7.2 | exon | 49097488 | 49097665 | 49097488 | ID=MS.gene022992.t1.exon5;Parent=MS.gene022992.t1 |
| chr7.2 | CDS | 49097488 | 49097665 | 49097488 | ID=cds.MS.gene022992.t1;Parent=MS.gene022992.t1 |
| chr7.2 | exon | 49097237 | 49097358 | 49097237 | ID=MS.gene022992.t1.exon6;Parent=MS.gene022992.t1 |
| chr7.2 | CDS | 49097237 | 49097358 | 49097237 | ID=cds.MS.gene022992.t1;Parent=MS.gene022992.t1 |
| chr7.2 | exon | 49097087 | 49097146 | 49097087 | ID=MS.gene022992.t1.exon7;Parent=MS.gene022992.t1 |
| chr7.2 | CDS | 49097087 | 49097146 | 49097087 | ID=cds.MS.gene022992.t1;Parent=MS.gene022992.t1 |
| chr7.2 | exon | 49095273 | 49095686 | 49095273 | ID=MS.gene022992.t1.exon8;Parent=MS.gene022992.t1 |
| chr7.2 | CDS | 49095273 | 49095686 | 49095273 | ID=cds.MS.gene022992.t1;Parent=MS.gene022992.t1 |
| Gene Sequence |
| Protein sequence |
