Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063501.t1 | XP_013458005.1 | 97.4 | 461 | 11 | 1 | 1 | 461 | 1 | 460 | 8.40E-232 | 812.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063501.t1 | Q9FME2 | 53.4 | 380 | 160 | 8 | 1 | 377 | 1 | 366 | 3.2e-91 | 337.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063501.t1 | A0A072URQ4 | 97.4 | 461 | 11 | 1 | 1 | 461 | 1 | 460 | 6.0e-232 | 812.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050521 | MS.gene063501 | 0.82 | 8.64E-53 | -1.69E-46 |
| MS.gene050818 | MS.gene063501 | 0.811427 | 7.04E-51 | -1.69E-46 |
| MS.gene054585 | MS.gene063501 | 0.809618 | 1.73E-50 | -1.69E-46 |
| MS.gene055719 | MS.gene063501 | 0.821074 | 4.90E-53 | -1.69E-46 |
| MS.gene058334 | MS.gene063501 | 0.801733 | 7.83E-49 | -1.69E-46 |
| MS.gene058386 | MS.gene063501 | 0.806603 | 7.59E-50 | -1.69E-46 |
| MS.gene061044 | MS.gene063501 | 0.801227 | 9.94E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene027297 | MS.gene063501 | PPI |
| MS.gene051725 | MS.gene063501 | PPI |
| MS.gene063501 | MS.gene064286 | PPI |
| MS.gene063501 | MS.gene84431 | PPI |
| MS.gene59855 | MS.gene063501 | PPI |
| MS.gene063501 | MS.gene022992 | PPI |
| MS.gene87572 | MS.gene063501 | PPI |
| MS.gene063501 | MS.gene86635 | PPI |
| MS.gene063501 | MS.gene069831 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063501.t1 | MTR_4g109640 | 97.614 | 461 | 10 | 1 | 1 | 461 | 1 | 460 | 0.0 | 920 |
| MS.gene063501.t1 | MTR_4g109640 | 96.185 | 367 | 13 | 1 | 1 | 367 | 1 | 366 | 0.0 | 723 |
| MS.gene063501.t1 | MTR_4g109640 | 97.245 | 363 | 9 | 1 | 1 | 363 | 1 | 362 | 0.0 | 723 |
| MS.gene063501.t1 | MTR_7g013840 | 50.119 | 419 | 187 | 9 | 1 | 403 | 1 | 413 | 6.56e-123 | 367 |
| MS.gene063501.t1 | MTR_7g013840 | 50.000 | 420 | 187 | 10 | 1 | 403 | 1 | 414 | 3.89e-121 | 362 |
| MS.gene063501.t1 | MTR_7g055610 | 41.300 | 477 | 233 | 12 | 1 | 455 | 6 | 457 | 9.50e-98 | 303 |
| MS.gene063501.t1 | MTR_7g057520 | 42.060 | 466 | 223 | 12 | 12 | 455 | 10 | 450 | 1.62e-97 | 303 |
| MS.gene063501.t1 | MTR_4g083150 | 41.372 | 481 | 222 | 15 | 1 | 445 | 1 | 457 | 2.27e-88 | 278 |
| MS.gene063501.t1 | MTR_7g098440 | 34.312 | 443 | 252 | 15 | 17 | 433 | 13 | 442 | 2.23e-51 | 180 |
| MS.gene063501.t1 | MTR_1g045800 | 32.033 | 359 | 196 | 11 | 17 | 345 | 14 | 354 | 6.20e-37 | 140 |
| MS.gene063501.t1 | MTR_8g080790 | 33.607 | 122 | 73 | 4 | 14 | 132 | 3 | 119 | 6.46e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063501.t1 | AT5G60980 | 51.893 | 449 | 189 | 12 | 1 | 443 | 1 | 428 | 1.18e-119 | 358 |
| MS.gene063501.t1 | AT5G60980 | 51.893 | 449 | 189 | 12 | 1 | 443 | 1 | 428 | 1.18e-119 | 358 |
| MS.gene063501.t1 | AT5G60980 | 51.778 | 450 | 189 | 13 | 1 | 443 | 1 | 429 | 6.01e-118 | 353 |
| MS.gene063501.t1 | AT5G60980 | 51.778 | 450 | 189 | 13 | 1 | 443 | 1 | 429 | 6.01e-118 | 353 |
| MS.gene063501.t1 | AT3G25150 | 41.244 | 434 | 200 | 11 | 8 | 421 | 10 | 408 | 6.83e-86 | 272 |
| MS.gene063501.t1 | AT3G25150 | 41.244 | 434 | 200 | 11 | 8 | 421 | 109 | 507 | 1.09e-84 | 271 |
| MS.gene063501.t1 | AT5G48650 | 36.136 | 440 | 223 | 18 | 14 | 417 | 13 | 430 | 1.58e-63 | 213 |
| MS.gene063501.t1 | AT2G03640 | 34.537 | 443 | 225 | 14 | 9 | 427 | 5 | 406 | 2.06e-63 | 211 |
| MS.gene063501.t1 | AT2G03640 | 34.537 | 443 | 225 | 14 | 9 | 427 | 5 | 406 | 2.06e-63 | 211 |
| MS.gene063501.t1 | AT2G03640 | 34.537 | 443 | 225 | 14 | 9 | 427 | 5 | 406 | 2.06e-63 | 211 |
| MS.gene063501.t1 | AT2G03640 | 35.135 | 444 | 222 | 16 | 9 | 427 | 5 | 407 | 4.02e-63 | 211 |
| MS.gene063501.t1 | AT1G13730 | 34.118 | 425 | 208 | 13 | 1 | 406 | 1 | 372 | 5.51e-60 | 202 |
| MS.gene063501.t1 | AT1G13730 | 34.118 | 425 | 208 | 13 | 1 | 406 | 1 | 372 | 5.51e-60 | 202 |
| MS.gene063501.t1 | AT2G03640 | 32.340 | 470 | 230 | 14 | 9 | 427 | 5 | 437 | 5.47e-59 | 201 |
| MS.gene063501.t1 | AT1G69250 | 33.933 | 389 | 212 | 10 | 6 | 379 | 2 | 360 | 3.45e-57 | 195 |
| MS.gene063501.t1 | AT1G69250 | 34.211 | 342 | 186 | 8 | 10 | 342 | 6 | 317 | 2.33e-47 | 168 |
| MS.gene063501.t1 | AT5G43960 | 34.074 | 405 | 216 | 14 | 11 | 379 | 3 | 392 | 4.32e-46 | 166 |
| MS.gene063501.t1 | AT3G07250 | 28.537 | 410 | 239 | 14 | 12 | 407 | 5 | 374 | 8.95e-35 | 137 |
| MS.gene063501.t1 | AT5G43960 | 33.237 | 346 | 183 | 12 | 68 | 379 | 2 | 333 | 6.14e-33 | 129 |
| MS.gene063501.t1 | AT3G55540 | 37.226 | 137 | 78 | 5 | 15 | 145 | 30 | 164 | 2.53e-18 | 86.3 |
| MS.gene063501.t1 | AT3G24463 | 40.952 | 105 | 56 | 4 | 15 | 114 | 9 | 112 | 3.22e-15 | 72.8 |
| MS.gene063501.t1 | AT1G27970 | 34.146 | 123 | 71 | 5 | 14 | 132 | 6 | 122 | 6.72e-11 | 60.1 |
Find 127 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAACTTCATCACCATTATT+AGG | 0.140835 | 8.4:-18015008 | None:intergenic |
| GTTTCCGAGGCGAGGGTTTC+CGG | 0.175478 | 8.4:+18017740 | MS.gene063501:CDS |
| AGTTCAATTGTTGCATTAAA+TGG | 0.198571 | 8.4:-18015661 | None:intergenic |
| TTAGTTACTGGATGCTTAAC+TGG | 0.242440 | 8.4:+18014651 | MS.gene063501:CDS |
| TTTCAGCATGGGTTCTGTTT+TGG | 0.246084 | 8.4:+18015836 | MS.gene063501:intron |
| ATGTCTTAAATGACGTCTTT+AGG | 0.254497 | 8.4:+18014739 | MS.gene063501:CDS |
| TTTGGTGGTGGACGAGGTTT+TGG | 0.272425 | 8.4:+18017775 | MS.gene063501:CDS |
| TGGACTCCACCATGCTTAAT+AGG | 0.272831 | 8.4:-18015712 | None:intergenic |
| AAACTTCATCACCATTATTA+GGG | 0.277499 | 8.4:-18015007 | None:intergenic |
| CGCCACTCTTGCAGCTCGGC+TGG | 0.292730 | 8.4:-18015308 | None:intergenic |
| AATAATGTCATCAATGAAAA+TGG | 0.295322 | 8.4:+18014807 | MS.gene063501:CDS |
| CTTGGTGCACAGGTTCTATC+AGG | 0.310789 | 8.4:+18013758 | MS.gene063501:CDS |
| TCATCCTCTGCAGAGGTTGC+AGG | 0.311559 | 8.4:-18014981 | None:intergenic |
| TGGCAAGTTCCGTATATATA+TGG | 0.319559 | 8.4:-18015641 | None:intergenic |
| CTGTACAATCTTCATAGTTC+AGG | 0.328630 | 8.4:-18014575 | None:intergenic |
| TTTCCGAGGCGAGGGTTTCC+GGG | 0.337841 | 8.4:+18017741 | MS.gene063501:CDS |
| AAGCCATACTAACCTGATTC+TGG | 0.350527 | 8.4:-18014846 | None:intergenic |
| AGACCTTACTGCTTCTTACT+TGG | 0.360516 | 8.4:-18015732 | None:intergenic |
| GGGTAGATGGTGTAACATTA+TGG | 0.366551 | 8.4:-18017903 | None:intergenic |
| TATGCTCACGCTGGGGTAGA+TGG | 0.374864 | 8.4:-18017916 | None:intergenic |
| TGAGGACTAGGAGTAGTAGA+AGG | 0.392176 | 8.4:-18013678 | None:intergenic |
| CGTGGTGGACGCCATGGTGT+GGG | 0.400855 | 8.4:+18017877 | MS.gene063501:CDS |
| GAGGATGAAAACCCTAATAA+TGG | 0.402358 | 8.4:+18014996 | MS.gene063501:CDS |
| TCTCATAGGACAAGTCAAAA+TGG | 0.403541 | 8.4:+18017847 | MS.gene063501:CDS |
| CATCAATATACACCTTCTTC+AGG | 0.411054 | 8.4:-18015433 | None:intergenic |
| CGGAAGAGGGAGGCATCCTT+CGG | 0.427046 | 8.4:+18017708 | MS.gene063501:CDS |
| GGTAGCATGCCGTTGTTCAT+TGG | 0.428270 | 8.4:-18015341 | None:intergenic |
| ATGAAAAGTAACACAGCATC+TGG | 0.431023 | 8.4:+18015271 | MS.gene063501:CDS |
| TCATTCTCACTTAGATCATT+AGG | 0.431566 | 8.4:-18015089 | None:intergenic |
| TAGAACCTGTGCACCAAGTC+AGG | 0.435047 | 8.4:-18013753 | None:intergenic |
| TTCTGTGCAAAATGCACTTA+AGG | 0.437793 | 8.4:+18015883 | MS.gene063501:CDS |
| GCTGTGCACATGCCAGAATC+AGG | 0.445218 | 8.4:+18014834 | MS.gene063501:CDS |
| GCGTGGTGGACGCCATGGTG+TGG | 0.451351 | 8.4:+18017876 | MS.gene063501:CDS |
| CAGAAACCAAGGGGAATTCT+CGG | 0.453158 | 8.4:+18017810 | MS.gene063501:CDS |
| AACTATCACACCTTTCTCAT+AGG | 0.460268 | 8.4:-18014628 | None:intergenic |
| AAGGTCATTCCATATATATA+CGG | 0.461746 | 8.4:+18015632 | MS.gene063501:CDS |
| GGCGCTAATGCCTCAGGCCC+AGG | 0.463407 | 8.4:-18015376 | None:intergenic |
| CTAGTAAGCGATAGCGGAAG+AGG | 0.464753 | 8.4:+18017694 | MS.gene063501:intron |
| AGTTGTTGGCAATGCCTTTG+TGG | 0.464870 | 8.4:+18013701 | MS.gene063501:CDS |
| TGCCTCTCACCAACAGTGAT+AGG | 0.466058 | 8.4:-18017546 | None:intergenic |
| AAGAGGTGGTTTCCGAGGCG+AGG | 0.467895 | 8.4:+18017732 | MS.gene063501:CDS |
| AGGATCTTCCACAAGATGTT+CGG | 0.469823 | 8.4:-18014961 | None:intergenic |
| AGATCCAACTTCTGCAGTCC+AGG | 0.473884 | 8.4:+18015127 | MS.gene063501:CDS |
| TGATGAAGTTTATTATCCTA+TGG | 0.474945 | 8.4:+18015019 | MS.gene063501:CDS |
| GGAAGAGGGAGGCATCCTTC+GGG | 0.476657 | 8.4:+18017709 | MS.gene063501:CDS |
| GGTGGGCGTGGTGGACGCCA+TGG | 0.480860 | 8.4:+18017871 | MS.gene063501:CDS |
| CAGGCTTCACCTATCACTGT+TGG | 0.481423 | 8.4:+18017537 | MS.gene063501:intron |
| CTTGGTGCACTGTCACTACT+AGG | 0.485500 | 8.4:-18015397 | None:intergenic |
| ATTGATGACATTATTTATTG+AGG | 0.486265 | 8.4:-18014799 | None:intergenic |
| GGGAGGCATCCTTCGGGAAG+AGG | 0.486465 | 8.4:+18017715 | MS.gene063501:CDS |
| GGGAGATTTGGTGGTGGACG+AGG | 0.486577 | 8.4:+18017769 | MS.gene063501:CDS |
| ATGTCTTTCGTGCATCATCC+TGG | 0.491934 | 8.4:-18015145 | None:intergenic |
| GCCACTCTTGCAGCTCGGCT+GGG | 0.494495 | 8.4:-18015307 | None:intergenic |
| ACTCCTAGTCCTCAAGTTGT+TGG | 0.497836 | 8.4:+18013687 | MS.gene063501:CDS |
| ACATAATATCCTTTGTCTTG+TGG | 0.499491 | 8.4:-18014720 | None:intergenic |
| GCTACCGCAAAATCTACTCC+TGG | 0.499593 | 8.4:+18015358 | MS.gene063501:CDS |
| CCTTCTTCCTTGTTGTCCAT+AGG | 0.500348 | 8.4:-18015035 | None:intergenic |
| TTAACCAATATGCTCACGCT+GGG | 0.500907 | 8.4:-18017924 | None:intergenic |
| TCAGGAACGTCACTAGTCCT+TGG | 0.504045 | 8.4:-18015415 | None:intergenic |
| CACCAAATCTCCCACGCCCC+CGG | 0.511878 | 8.4:-18017759 | None:intergenic |
| TGTACAATCTTCATAGTTCA+GGG | 0.513254 | 8.4:-18014574 | None:intergenic |
| AGAGGTGGTTTCCGAGGCGA+GGG | 0.514716 | 8.4:+18017733 | MS.gene063501:CDS |
| TCATCCTGGACTGCAGAAGT+TGG | 0.514718 | 8.4:-18015131 | None:intergenic |
| AATCGCCTGACTTGGTGCAC+AGG | 0.516784 | 8.4:+18013748 | MS.gene063501:CDS |
| GGACAACAAGGAAGAAGGAT+TGG | 0.517698 | 8.4:+18015040 | MS.gene063501:CDS |
| AGGATTGGTTATTGATGAAG+AGG | 0.520461 | 8.4:+18015055 | MS.gene063501:CDS |
| CCTATGGACAACAAGGAAGA+AGG | 0.522127 | 8.4:+18015035 | MS.gene063501:CDS |
| CTACTAGGCGCTAATGCCTC+AGG | 0.526959 | 8.4:-18015382 | None:intergenic |
| GTGGTGGACGCCATGGTGTG+GGG | 0.532361 | 8.4:+18017878 | MS.gene063501:CDS |
| TCTGCATCAATCGCCTGACT+TGG | 0.536954 | 8.4:+18013740 | MS.gene063501:CDS |
| AGTCAAAATGGAGGTGGGCG+TGG | 0.538312 | 8.4:+18017859 | MS.gene063501:CDS |
| GCACCCTTCCGAACATCTTG+TGG | 0.539517 | 8.4:+18014953 | MS.gene063501:CDS |
| TTGCCAACAACTTGAGGACT+AGG | 0.541881 | 8.4:-18013690 | None:intergenic |
| AGGACAAGTCAAAATGGAGG+TGG | 0.544941 | 8.4:+18017853 | MS.gene063501:CDS |
| TCCCAGCCGAGCTGCAAGAG+TGG | 0.546033 | 8.4:+18015306 | MS.gene063501:CDS |
| CTTGTCCTATGAGAACTCCT+AGG | 0.549687 | 8.4:-18017838 | None:intergenic |
| ACTAGTGACGTTCCTGAAGA+AGG | 0.551265 | 8.4:+18015421 | MS.gene063501:CDS |
| GGGCGTGGGAGATTTGGTGG+TGG | 0.555524 | 8.4:+18017763 | MS.gene063501:CDS |
| AGAAACCAAGGGGAATTCTC+GGG | 0.557016 | 8.4:+18017811 | MS.gene063501:CDS |
| AGAAATGAATTCAGAAACCA+AGG | 0.559653 | 8.4:+18017799 | MS.gene063501:CDS |
| AGGCATCCTTCGGGAAGAGG+TGG | 0.563265 | 8.4:+18017718 | MS.gene063501:CDS |
| GCTCAGGAGTCCTATGAGAA+AGG | 0.568276 | 8.4:+18014618 | MS.gene063501:CDS |
| TACTGGATGCTTAACTGGGA+AGG | 0.573370 | 8.4:+18014656 | MS.gene063501:CDS |
| ATTAACCAATATGCTCACGC+TGG | 0.573664 | 8.4:-18017925 | None:intergenic |
| TCGGGAAGAGGTGGTTTCCG+AGG | 0.574206 | 8.4:+18017727 | MS.gene063501:CDS |
| AGTCCAAGTAAGAAGCAGTA+AGG | 0.574728 | 8.4:+18015729 | MS.gene063501:CDS |
| GTCGTCCCGAGAATTCCCCT+TGG | 0.579480 | 8.4:-18017816 | None:intergenic |
| CAGACGCCACTCTTGCAGCT+CGG | 0.581183 | 8.4:-18015312 | None:intergenic |
| TGACGTCTTTAGGTACATTG+AGG | 0.581193 | 8.4:+18014749 | MS.gene063501:CDS |
| GGGAATTCTCGGGACGACCT+AGG | 0.583471 | 8.4:+18017821 | MS.gene063501:CDS |
| GAGGACTAGGAGTAGTAGAA+GGG | 0.589077 | 8.4:-18013677 | None:intergenic |
| CTACCGCAAAATCTACTCCT+GGG | 0.589382 | 8.4:+18015359 | MS.gene063501:CDS |
| TAGTTACTGGATGCTTAACT+GGG | 0.594894 | 8.4:+18014652 | MS.gene063501:CDS |
| TTGAGGCAGAACTTAACTGT+GGG | 0.595995 | 8.4:-18014782 | None:intergenic |
| AAAATCTACTCCTGGGCCTG+AGG | 0.598211 | 8.4:+18015366 | MS.gene063501:CDS |
| CACCTATCACTGTTGGTGAG+AGG | 0.598308 | 8.4:+18017544 | MS.gene063501:CDS |
| AAGGCATTGCCAACAACTTG+AGG | 0.599295 | 8.4:-18013696 | None:intergenic |
| TTCCGAGGCGAGGGTTTCCG+GGG | 0.602548 | 8.4:+18017742 | MS.gene063501:CDS |
| TGAGAGGCAAGCTGTTATTG+AGG | 0.604470 | 8.4:+18017560 | MS.gene063501:CDS |
| TCTTCCACAAGATGTTCGGA+AGG | 0.605079 | 8.4:-18014957 | None:intergenic |
| CAAAATGGAGGTGGGCGTGG+TGG | 0.606054 | 8.4:+18017862 | MS.gene063501:CDS |
| AAATTTGGTCCTATTAAGCA+TGG | 0.606114 | 8.4:+18015703 | MS.gene063501:CDS |
| CTGGGAAGGATAACGTGAGA+AGG | 0.608352 | 8.4:+18014670 | MS.gene063501:CDS |
| CTTATTCTAGTAAGCGATAG+CGG | 0.609149 | 8.4:+18017688 | MS.gene063501:intron |
| TAGTAAGCGATAGCGGAAGA+GGG | 0.613022 | 8.4:+18017695 | MS.gene063501:intron |
| GAAATGAATTCAGAAACCAA+GGG | 0.613900 | 8.4:+18017800 | MS.gene063501:CDS |
| GACGACCTAGGAGTTCTCAT+AGG | 0.620067 | 8.4:+18017833 | MS.gene063501:CDS |
| AGATCCTGCAACCTCTGCAG+AGG | 0.627391 | 8.4:+18014977 | MS.gene063501:CDS |
| CGGAAACCACCTCTTCCCGA+AGG | 0.627436 | 8.4:-18017724 | None:intergenic |
| GGACAAGTCAAAATGGAGGT+GGG | 0.630012 | 8.4:+18017854 | MS.gene063501:CDS |
| GTGATAATATTGCTCCACAA+AGG | 0.638427 | 8.4:-18013715 | None:intergenic |
| TTTGGTCCTATTAAGCATGG+TGG | 0.646743 | 8.4:+18015706 | MS.gene063501:CDS |
| ATTGAGGCAGAACTTAACTG+TGG | 0.647373 | 8.4:-18014783 | None:intergenic |
| TTGAGTAGATCAGACAGCAA+TGG | 0.654618 | 8.4:+18013792 | MS.gene063501:CDS |
| TAAGCGATAGCGGAAGAGGG+AGG | 0.655900 | 8.4:+18017698 | MS.gene063501:CDS |
| CATTATGGTTCCCCACACCA+TGG | 0.658602 | 8.4:-18017888 | None:intergenic |
| TCCGAGGCGAGGGTTTCCGG+GGG | 0.660506 | 8.4:+18017743 | MS.gene063501:CDS |
| TTCTCACTTAGATCATTAGG+CGG | 0.670518 | 8.4:-18015086 | None:intergenic |
| CTTCCACAAGATGTTCGGAA+GGG | 0.681793 | 8.4:-18014956 | None:intergenic |
| CATAGGACAAGTCAAAATGG+AGG | 0.683264 | 8.4:+18017850 | MS.gene063501:CDS |
| AAATGAATTCAGAAACCAAG+GGG | 0.690944 | 8.4:+18017801 | MS.gene063501:CDS |
| CTGCTAAATCCAATGAACAA+CGG | 0.694097 | 8.4:+18015332 | MS.gene063501:CDS |
| TTATTATCCTATGGACAACA+AGG | 0.695300 | 8.4:+18015028 | MS.gene063501:CDS |
| TGTCATCAATGAAAATGGTG+AGG | 0.702625 | 8.4:+18014812 | MS.gene063501:CDS |
| TAACCAATATGCTCACGCTG+GGG | 0.722125 | 8.4:-18017923 | None:intergenic |
| GAAAAGATATCGAGTACACG+AGG | 0.731969 | 8.4:+18017582 | MS.gene063501:CDS |
| CTAGTAGTGACAGTGCACCA+AGG | 0.746793 | 8.4:+18015398 | MS.gene063501:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAATTATAGTTAAATTAT+AGG | + | chr8.4:18014053-18014072 | MS.gene063501:intron | 10.0% |
| !! | ATTATAGTTAAATTATAGGT+AGG | + | chr8.4:18014057-18014076 | MS.gene063501:intron | 15.0% |
| !!! | AACTTTAATTTTGAATAAAC+TGG | + | chr8.4:18016001-18016020 | MS.gene063501:intron | 15.0% |
| !!! | ATCTTTTAGGTTTTATAAAA+CGG | + | chr8.4:18014194-18014213 | MS.gene063501:intron | 15.0% |
| !!! | CTAAATTTAATTTCATTTTC+AGG | + | chr8.4:18017518-18017537 | MS.gene063501:intron | 15.0% |
| !!! | TTTTTTTAATCATATTACCA+AGG | + | chr8.4:18017622-18017641 | MS.gene063501:intron | 15.0% |
| !! | AAAATCAAAACAATCAGATT+GGG | - | chr8.4:18016367-18016386 | None:intergenic | 20.0% |
| !! | AATAATGTCATCAATGAAAA+TGG | + | chr8.4:18014807-18014826 | MS.gene063501:CDS | 20.0% |
| !! | ATCATTGTTCTATATACATT+TGG | - | chr8.4:18013908-18013927 | None:intergenic | 20.0% |
| !! | ATTATTATGATTGATTGTCA+TGG | - | chr8.4:18016964-18016983 | None:intergenic | 20.0% |
| !! | GTTTATAACTTCATATATTC+TGG | + | chr8.4:18015555-18015574 | MS.gene063501:intron | 20.0% |
| !! | TAAAATCAAAACAATCAGAT+TGG | - | chr8.4:18016368-18016387 | None:intergenic | 20.0% |
| !! | TGTAATAAATAGTTCTTTCT+TGG | - | chr8.4:18015967-18015986 | None:intergenic | 20.0% |
| !!! | AAAAAACATAAACTGTTTTC+TGG | + | chr8.4:18016302-18016321 | MS.gene063501:intron | 20.0% |
| !!! | AAAGTTTTCTCAAATCAAAT+AGG | - | chr8.4:18017157-18017176 | None:intergenic | 20.0% |
| !!! | AGTTTTTGTATTTACTGTAT+CGG | + | chr8.4:18016229-18016248 | MS.gene063501:intron | 20.0% |
| !!! | ATTGATGACATTATTTATTG+AGG | - | chr8.4:18014802-18014821 | None:intergenic | 20.0% |
| !!! | GAAGAAGTTTTTAAGAAATT+TGG | + | chr8.4:18015688-18015707 | MS.gene063501:CDS | 20.0% |
| !!! | TTGATTTGAGAAAACTTTAT+TGG | + | chr8.4:18017159-18017178 | MS.gene063501:intron | 20.0% |
| ! | AAACTTCATCACCATTATTA+GGG | - | chr8.4:18015010-18015029 | None:intergenic | 25.0% |
| ! | AAGGTCATTCCATATATATA+CGG | + | chr8.4:18015632-18015651 | MS.gene063501:CDS | 25.0% |
| ! | AATAAAACTAATTGCTTCCT+AGG | - | chr8.4:18017059-18017078 | None:intergenic | 25.0% |
| ! | ACAATAGAATGATTCTAACT+AGG | - | chr8.4:18016803-18016822 | None:intergenic | 25.0% |
| ! | AGTAAAAAACCATTCGATAT+AGG | - | chr8.4:18017345-18017364 | None:intergenic | 25.0% |
| ! | AGTTCAATTGTTGCATTAAA+TGG | - | chr8.4:18015664-18015683 | None:intergenic | 25.0% |
| ! | ATAAAGGATACAAAAGATCA+GGG | - | chr8.4:18014463-18014482 | None:intergenic | 25.0% |
| ! | ATAATAATACTATGCAGAAG+GGG | + | chr8.4:18016976-18016995 | MS.gene063501:intron | 25.0% |
| ! | ATATTATCCCATTCAATTGA+TGG | + | chr8.4:18016719-18016738 | MS.gene063501:intron | 25.0% |
| ! | CATAATAATACTATGCAGAA+GGG | + | chr8.4:18016975-18016994 | MS.gene063501:intron | 25.0% |
| ! | CTACTTCAGAATAATTTGAA+TGG | - | chr8.4:18017420-18017439 | None:intergenic | 25.0% |
| ! | GAAGATTGATCAACAAAATT+GGG | - | chr8.4:18016778-18016797 | None:intergenic | 25.0% |
| ! | TAAACTTCATCACCATTATT+AGG | - | chr8.4:18015011-18015030 | None:intergenic | 25.0% |
| ! | TATGCGAGTACAAATAATAT+AGG | - | chr8.4:18017378-18017397 | None:intergenic | 25.0% |
| ! | TCATAATAATACTATGCAGA+AGG | + | chr8.4:18016974-18016993 | MS.gene063501:intron | 25.0% |
| ! | TGAAGATTGATCAACAAAAT+TGG | - | chr8.4:18016779-18016798 | None:intergenic | 25.0% |
| ! | TGATGAAGTTTATTATCCTA+TGG | + | chr8.4:18015019-18015038 | MS.gene063501:CDS | 25.0% |
| ! | TTTGTTACCATCAATTGAAT+GGG | - | chr8.4:18016729-18016748 | None:intergenic | 25.0% |
| !! | ACTTTTGAATTGATAAGTAG+TGG | + | chr8.4:18016027-18016046 | MS.gene063501:intron | 25.0% |
| !! | TGTAAGCTAATCTGTATTTT+TGG | + | chr8.4:18015809-18015828 | MS.gene063501:intron | 25.0% |
| !! | TGTAATTTTCCTATATCGAA+TGG | + | chr8.4:18017333-18017352 | MS.gene063501:intron | 25.0% |
| !! | TTCAACTGTTGATTATAGTT+TGG | + | chr8.4:18015920-18015939 | MS.gene063501:intron | 25.0% |
| !! | TTTTCAACTCATTAACTAGA+AGG | + | chr8.4:18014511-18014530 | MS.gene063501:intron | 25.0% |
| !! | TTTTCCATATACCAAAAGAA+AGG | + | chr8.4:18016852-18016871 | MS.gene063501:intron | 25.0% |
| !! | TTTTGTTACCATCAATTGAA+TGG | - | chr8.4:18016730-18016749 | None:intergenic | 25.0% |
| !!! | ATAGCCTCTTTTTCATTAAT+GGG | - | chr8.4:18015523-18015542 | None:intergenic | 25.0% |
| !!! | GTTTTATTGGAAAGTAGATA+CGG | + | chr8.4:18017071-18017090 | MS.gene063501:intron | 25.0% |
| !!! | TAGGAAGCAATTAGTTTTAT+TGG | + | chr8.4:18017058-18017077 | MS.gene063501:intron | 25.0% |
| !!! | TATAGCCTCTTTTTCATTAA+TGG | - | chr8.4:18015524-18015543 | None:intergenic | 25.0% |
| !!! | TCATGATATCTTTCTAGTTA+CGG | + | chr8.4:18013942-18013961 | MS.gene063501:intron | 25.0% |
| AAAATAAACCACAAGTACCA+GGG | - | chr8.4:18014495-18014514 | None:intergenic | 30.0% | |
| AAACATGCAAAAAAAACCAC+TGG | - | chr8.4:18017239-18017258 | None:intergenic | 30.0% | |
| AAATGAATTCAGAAACCAAG+GGG | + | chr8.4:18017801-18017820 | MS.gene063501:CDS | 30.0% | |
| AAATTTGGTCCTATTAAGCA+TGG | + | chr8.4:18015703-18015722 | MS.gene063501:CDS | 30.0% | |
| AACTAGAAGGAAATAACTGT+TGG | + | chr8.4:18014524-18014543 | MS.gene063501:intron | 30.0% | |
| AACTTTATTGGAAAGTAGCT+TGG | + | chr8.4:18017171-18017190 | MS.gene063501:intron | 30.0% | |
| ACATAATATCCTTTGTCTTG+TGG | - | chr8.4:18014723-18014742 | None:intergenic | 30.0% | |
| ACATCCCACAATTATTTAGT+AGG | - | chr8.4:18014377-18014396 | None:intergenic | 30.0% | |
| ACCAGGGTAAATATAGATAA+AGG | - | chr8.4:18014479-18014498 | None:intergenic | 30.0% | |
| ACTCCCTACTAAATAATTGT+GGG | + | chr8.4:18014370-18014389 | MS.gene063501:intron | 30.0% | |
| AGAAATGAATTCAGAAACCA+AGG | + | chr8.4:18017799-18017818 | MS.gene063501:CDS | 30.0% | |
| AGAGAATGCAATAATGTGAA+AGG | + | chr8.4:18016623-18016642 | MS.gene063501:intron | 30.0% | |
| ATGTCTTAAATGACGTCTTT+AGG | + | chr8.4:18014739-18014758 | MS.gene063501:CDS | 30.0% | |
| CAAATAACTAAACTGTCAAC+AGG | - | chr8.4:18017484-18017503 | None:intergenic | 30.0% | |
| CATCCCACAATTATTTAGTA+GGG | - | chr8.4:18014376-18014395 | None:intergenic | 30.0% | |
| GAAATGAATTCAGAAACCAA+GGG | + | chr8.4:18017800-18017819 | MS.gene063501:CDS | 30.0% | |
| GAAGGGGATTAATAATACAA+CGG | + | chr8.4:18016992-18017011 | MS.gene063501:intron | 30.0% | |
| GATAAAGGATACAAAAGATC+AGG | - | chr8.4:18014464-18014483 | None:intergenic | 30.0% | |
| GTAATCGTATTCACAAAATC+CGG | + | chr8.4:18017028-18017047 | MS.gene063501:intron | 30.0% | |
| GTCAATATTGTTTCCTTCAA+AGG | + | chr8.4:18016534-18016553 | MS.gene063501:intron | 30.0% | |
| TAAGAGTTTCACTGATATGA+AGG | + | chr8.4:18015246-18015265 | MS.gene063501:intron | 30.0% | |
| TAATGACAAGAGAAAAAGAC+AGG | - | chr8.4:18016587-18016606 | None:intergenic | 30.0% | |
| TAGATTTGTATCTTCTCACA+TGG | + | chr8.4:18016419-18016438 | MS.gene063501:intron | 30.0% | |
| TCAAATCAGAAACTCGATAT+AGG | - | chr8.4:18017278-18017297 | None:intergenic | 30.0% | |
| TCATTCTCACTTAGATCATT+AGG | - | chr8.4:18015092-18015111 | None:intergenic | 30.0% | |
| TCCTTTATCTATATTTACCC+TGG | + | chr8.4:18014475-18014494 | MS.gene063501:intron | 30.0% | |
| TGAATTGATAAGTAGTGGTA+CGG | + | chr8.4:18016032-18016051 | MS.gene063501:intron | 30.0% | |
| TGTACAATCTTCATAGTTCA+GGG | - | chr8.4:18014577-18014596 | None:intergenic | 30.0% | |
| TTATTATCCTATGGACAACA+AGG | + | chr8.4:18015028-18015047 | MS.gene063501:CDS | 30.0% | |
| TTTCACATTATTGCATTCTC+TGG | - | chr8.4:18016624-18016643 | None:intergenic | 30.0% | |
| ! | ACACAATGTTTTACAATCAG+AGG | - | chr8.4:18016159-18016178 | None:intergenic | 30.0% |
| ! | ATAGGTAGGTATTGTTCTAT+AGG | + | chr8.4:18014071-18014090 | MS.gene063501:intron | 30.0% |
| ! | CAGAACTAGGTTTATCTTTT+AGG | + | chr8.4:18014181-18014200 | MS.gene063501:intron | 30.0% |
| ! | GAAACCTTTCTTTTGGTATA+TGG | - | chr8.4:18016859-18016878 | None:intergenic | 30.0% |
| ! | GTGGGTTAAAAGGTTAATAA+AGG | + | chr8.4:18014008-18014027 | MS.gene063501:intron | 30.0% |
| ! | TCTGTTAGAAACCTTTCTTT+TGG | - | chr8.4:18016866-18016885 | None:intergenic | 30.0% |
| ! | TTCTAAAAGCTTGATATCTC+AGG | + | chr8.4:18014299-18014318 | MS.gene063501:intron | 30.0% |
| !! | AGAAATGTTGGTTTGTAGTA+GGG | + | chr8.4:18013969-18013988 | MS.gene063501:intron | 30.0% |
| !! | ATATCAAGCTTTTAGAAACC+AGG | - | chr8.4:18014296-18014315 | None:intergenic | 30.0% |
| !! | CTCATATATAGTGGGTTAAA+AGG | + | chr8.4:18013998-18014017 | MS.gene063501:intron | 30.0% |
| !! | TAGAAATGTTGGTTTGTAGT+AGG | + | chr8.4:18013968-18013987 | MS.gene063501:intron | 30.0% |
| !! | TAGCCTCTTTTTCATTAATG+GGG | - | chr8.4:18015522-18015541 | None:intergenic | 30.0% |
| !!! | TAAACTGTTTTCTGGTTAGA+AGG | + | chr8.4:18016310-18016329 | MS.gene063501:intron | 30.0% |
| !!! | TTTTGGCTTTGTTGAATATG+AGG | + | chr8.4:18015853-18015872 | MS.gene063501:CDS | 30.0% |
| AACTATCACACCTTTCTCAT+AGG | - | chr8.4:18014631-18014650 | None:intergenic | 35.0% | |
| AAGGAAATAACTGTTGGATC+AGG | + | chr8.4:18014530-18014549 | MS.gene063501:intron | 35.0% | |
| AATAAAAACTGCAGATGCTC+AGG | + | chr8.4:18014602-18014621 | MS.gene063501:CDS | 35.0% | |
| AATGTCCCATCATTATGATC+TGG | - | chr8.4:18014105-18014124 | None:intergenic | 35.0% | |
| ACACTAAAGATAGTAACCAG+TGG | + | chr8.4:18017220-18017239 | MS.gene063501:intron | 35.0% | |
| AGAAAGGTTTCTAACAGAAG+TGG | + | chr8.4:18016868-18016887 | MS.gene063501:intron | 35.0% | |
| AGAATAATTTGAATGGCCTG+TGG | - | chr8.4:18017413-18017432 | None:intergenic | 35.0% | |
| AGTTACGGATCTAGAAATGT+TGG | + | chr8.4:18013957-18013976 | MS.gene063501:intron | 35.0% | |
| ATGAAAAGTAACACAGCATC+TGG | + | chr8.4:18015271-18015290 | MS.gene063501:CDS | 35.0% | |
| ATGGAAAAAATTCCCCAAAC+AGG | - | chr8.4:18016840-18016859 | None:intergenic | 35.0% | |
| CACTCCCTACTAAATAATTG+TGG | + | chr8.4:18014369-18014388 | MS.gene063501:intron | 35.0% | |
| CATCAATATACACCTTCTTC+AGG | - | chr8.4:18015436-18015455 | None:intergenic | 35.0% | |
| CTACCCCATTAATGAAAAAG+AGG | + | chr8.4:18015516-18015535 | MS.gene063501:intron | 35.0% | |
| CTGCTAAATCCAATGAACAA+CGG | + | chr8.4:18015332-18015351 | MS.gene063501:CDS | 35.0% | |
| CTGTACAATCTTCATAGTTC+AGG | - | chr8.4:18014578-18014597 | None:intergenic | 35.0% | |
| CTTATTCTAGTAAGCGATAG+CGG | + | chr8.4:18017688-18017707 | MS.gene063501:intron | 35.0% | |
| GAAAATAAACCACAAGTACC+AGG | - | chr8.4:18014496-18014515 | None:intergenic | 35.0% | |
| GAAGAAGCAATTACAGATTG+AGG | - | chr8.4:18014915-18014934 | None:intergenic | 35.0% | |
| GAGGATGAAAACCCTAATAA+TGG | + | chr8.4:18014996-18015015 | MS.gene063501:CDS | 35.0% | |
| GCATTCCAGATCATAATGAT+GGG | + | chr8.4:18014097-18014116 | MS.gene063501:intron | 35.0% | |
| GGTCGATACTCATATATAGT+GGG | + | chr8.4:18013990-18014009 | MS.gene063501:intron | 35.0% | |
| GTGATAATATTGCTCCACAA+AGG | - | chr8.4:18013718-18013737 | None:intergenic | 35.0% | |
| TACAGGTAGTTGAGTCAATT+AGG | + | chr8.4:18016464-18016483 | MS.gene063501:intron | 35.0% | |
| TAGTTACTGGATGCTTAACT+GGG | + | chr8.4:18014652-18014671 | MS.gene063501:CDS | 35.0% | |
| TATAAAACGGCTCTGTTGTT+TGG | + | chr8.4:18014207-18014226 | MS.gene063501:intron | 35.0% | |
| TATATTTACCCTGGTACTTG+TGG | + | chr8.4:18014484-18014503 | MS.gene063501:intron | 35.0% | |
| TATCCTTGTGATGTAGATAC+AGG | + | chr8.4:18016447-18016466 | MS.gene063501:intron | 35.0% | |
| TATTCATTTCTGCCCTGTTT+GGG | + | chr8.4:18016824-18016843 | MS.gene063501:intron | 35.0% | |
| TCTCATAGGACAAGTCAAAA+TGG | + | chr8.4:18017847-18017866 | MS.gene063501:CDS | 35.0% | |
| TCTTCAGAGTGAGTCAAAAT+TGG | - | chr8.4:18015487-18015506 | None:intergenic | 35.0% | |
| TGGAAAAAATTCCCCAAACA+GGG | - | chr8.4:18016839-18016858 | None:intergenic | 35.0% | |
| TGGCAAGTTCCGTATATATA+TGG | - | chr8.4:18015644-18015663 | None:intergenic | 35.0% | |
| TGTCATCAATGAAAATGGTG+AGG | + | chr8.4:18014812-18014831 | MS.gene063501:CDS | 35.0% | |
| TTAGTTACTGGATGCTTAAC+TGG | + | chr8.4:18014651-18014670 | MS.gene063501:CDS | 35.0% | |
| TTCTCACTTAGATCATTAGG+CGG | - | chr8.4:18015089-18015108 | None:intergenic | 35.0% | |
| TTCTGTGCAAAATGCACTTA+AGG | + | chr8.4:18015883-18015902 | MS.gene063501:CDS | 35.0% | |
| TTGTGTCTGAAGAAAGATGT+TGG | + | chr8.4:18017131-18017150 | MS.gene063501:intron | 35.0% | |
| ! | GAAGGTGTATATTGATGCTT+TGG | + | chr8.4:18015439-18015458 | MS.gene063501:intron | 35.0% |
| ! | GTAGGTATTGTTCTATAGGT+TGG | + | chr8.4:18014075-18014094 | MS.gene063501:intron | 35.0% |
| ! | GTTCTCACAGACATTCTTTT+TGG | + | chr8.4:18014695-18014714 | MS.gene063501:CDS | 35.0% |
| !! | AGGATTGGTTATTGATGAAG+AGG | + | chr8.4:18015055-18015074 | MS.gene063501:CDS | 35.0% |
| !! | CTTTTAGAAACCAGGATGAT+GGG | - | chr8.4:18014288-18014307 | None:intergenic | 35.0% |
| !! | GGAAGTGCTGTATGTATATT+TGG | + | chr8.4:18015941-18015960 | MS.gene063501:intron | 35.0% |
| !! | TGCTTCTTCAATGTTTCTAG+AGG | + | chr8.4:18014926-18014945 | MS.gene063501:intron | 35.0% |
| !! | TTTTAGAAACCAGGATGATG+GGG | - | chr8.4:18014287-18014306 | None:intergenic | 35.0% |
| !!! | ATTTTTGGCTTCTTTCAGCA+TGG | + | chr8.4:18015824-18015843 | MS.gene063501:intron | 35.0% |
| !!! | GGTGTGATAGTTTTAGTTAC+TGG | + | chr8.4:18014639-18014658 | MS.gene063501:CDS | 35.0% |
| !!! | TTTTTGGCTTCTTTCAGCAT+GGG | + | chr8.4:18015825-18015844 | MS.gene063501:intron | 35.0% |
| AAACACATTCTGCTTACCAC+TGG | - | chr8.4:18017113-18017132 | None:intergenic | 40.0% | |
| AAGCCATACTAACCTGATTC+TGG | - | chr8.4:18014849-18014868 | None:intergenic | 40.0% | |
| ACATGCATTAGCAGAGTCTT+AGG | - | chr8.4:18014431-18014450 | None:intergenic | 40.0% | |
| ACTGCTACCATAATACAACC+CGG | - | chr8.4:18016937-18016956 | None:intergenic | 40.0% | |
| AGACCTTACTGCTTCTTACT+TGG | - | chr8.4:18015735-18015754 | None:intergenic | 40.0% | |
| AGGATCTTCCACAAGATGTT+CGG | - | chr8.4:18014964-18014983 | None:intergenic | 40.0% | |
| AGGTTTCTAACAGAAGTGGT+CGG | + | chr8.4:18016872-18016891 | MS.gene063501:intron | 40.0% | |
| AGTCCAAGTAAGAAGCAGTA+AGG | + | chr8.4:18015729-18015748 | MS.gene063501:CDS | 40.0% | |
| ATGAAGATACCTTGCACTCA+AGG | - | chr8.4:18016669-18016688 | None:intergenic | 40.0% | |
| ATGCATTAGCAGAGTCTTAG+GGG | - | chr8.4:18014429-18014448 | None:intergenic | 40.0% | |
| ATGCCAGAATCAGGTTAGTA+TGG | + | chr8.4:18014843-18014862 | MS.gene063501:intron | 40.0% | |
| ATTCATTTCTGCCCTGTTTG+GGG | + | chr8.4:18016825-18016844 | MS.gene063501:intron | 40.0% | |
| ATTGAGGCAGAACTTAACTG+TGG | - | chr8.4:18014786-18014805 | None:intergenic | 40.0% | |
| ATTTGAATGGCCTGTGGTTA+TGG | - | chr8.4:18017407-18017426 | None:intergenic | 40.0% | |
| CATAGGACAAGTCAAAATGG+AGG | + | chr8.4:18017850-18017869 | MS.gene063501:CDS | 40.0% | |
| CATATAGCAACCATAACCAC+AGG | + | chr8.4:18017394-18017413 | MS.gene063501:intron | 40.0% | |
| CATGCATTAGCAGAGTCTTA+GGG | - | chr8.4:18014430-18014449 | None:intergenic | 40.0% | |
| CATTGTGTATGCTTTCGAAC+TGG | + | chr8.4:18016171-18016190 | MS.gene063501:intron | 40.0% | |
| CTACCTGTATCTACATCACA+AGG | - | chr8.4:18016453-18016472 | None:intergenic | 40.0% | |
| CTATTCATTTCTGCCCTGTT+TGG | + | chr8.4:18016823-18016842 | MS.gene063501:intron | 40.0% | |
| CTTCATCCAACAATCTAGCA+AGG | - | chr8.4:18016257-18016276 | None:intergenic | 40.0% | |
| GAAAAGATATCGAGTACACG+AGG | + | chr8.4:18017582-18017601 | MS.gene063501:CDS | 40.0% | |
| GCTTGATATCTCAGGCTATT+TGG | + | chr8.4:18014307-18014326 | MS.gene063501:intron | 40.0% | |
| GGCAAGAACTTTACAGAACT+AGG | + | chr8.4:18014168-18014187 | MS.gene063501:intron | 40.0% | |
| GGCATTCCAGATCATAATGA+TGG | + | chr8.4:18014096-18014115 | MS.gene063501:intron | 40.0% | |
| GGGTAGATGGTGTAACATTA+TGG | - | chr8.4:18017906-18017925 | None:intergenic | 40.0% | |
| GGGTCGATACTCATATATAG+TGG | + | chr8.4:18013989-18014008 | MS.gene063501:intron | 40.0% | |
| GTTCTGTAAAGTTCTTGCCT+TGG | - | chr8.4:18014167-18014186 | None:intergenic | 40.0% | |
| GTTGTATTATGGTAGCAGTG+TGG | + | chr8.4:18016938-18016957 | MS.gene063501:intron | 40.0% | |
| TGACGTCTTTAGGTACATTG+AGG | + | chr8.4:18014749-18014768 | MS.gene063501:CDS | 40.0% | |
| TGTAAAGTTCTTGCCTTGGT+GGG | - | chr8.4:18014163-18014182 | None:intergenic | 40.0% | |
| TTGAGGCAGAACTTAACTGT+GGG | - | chr8.4:18014785-18014804 | None:intergenic | 40.0% | |
| TTGAGTAGATCAGACAGCAA+TGG | + | chr8.4:18013792-18013811 | MS.gene063501:CDS | 40.0% | |
| TTTGGTCCTATTAAGCATGG+TGG | + | chr8.4:18015706-18015725 | MS.gene063501:CDS | 40.0% | |
| ! | CGGCTTTTCTGTTCTGTTTT+TGG | + | chr8.4:18016512-18016531 | MS.gene063501:intron | 40.0% |
| ! | CTTGCATTGTGTTACTCTTC+TGG | + | chr8.4:18015205-18015224 | MS.gene063501:intron | 40.0% |
| ! | CTTTTTGCTACAGCTTCTGA+AGG | + | chr8.4:18015613-18015632 | MS.gene063501:intron | 40.0% |
| ! | TTTAGAAACCAGGATGATGG+GGG | - | chr8.4:18014286-18014305 | None:intergenic | 40.0% |
| ! | TTTCAGCATGGGTTCTGTTT+TGG | + | chr8.4:18015836-18015855 | MS.gene063501:intron | 40.0% |
| !! | AGGATAGCTTGTTCCTTTGA+AGG | - | chr8.4:18016550-18016569 | None:intergenic | 40.0% |
| !! | GAGACTTGCTTTAAGTTGCT+CGG | + | chr8.4:18016492-18016511 | MS.gene063501:intron | 40.0% |
| !! | GCTTTTAGAAACCAGGATGA+TGG | - | chr8.4:18014289-18014308 | None:intergenic | 40.0% |
| !!! | TTTTTGGCTCCACAAGACAA+AGG | + | chr8.4:18014711-18014730 | MS.gene063501:CDS | 40.0% |
| AATTGCTTCCTAGGTGCAAC+CGG | - | chr8.4:18017050-18017069 | None:intergenic | 45.0% | |
| ACTAGTGACGTTCCTGAAGA+AGG | + | chr8.4:18015421-18015440 | MS.gene063501:CDS | 45.0% | |
| AGAAACCAAGGGGAATTCTC+GGG | + | chr8.4:18017811-18017830 | MS.gene063501:CDS | 45.0% | |
| AGGACAAGTCAAAATGGAGG+TGG | + | chr8.4:18017853-18017872 | MS.gene063501:CDS | 45.0% | |
| AGTTGTTGGCAATGCCTTTG+TGG | + | chr8.4:18013701-18013720 | MS.gene063501:CDS | 45.0% | |
| ATGTCTTTCGTGCATCATCC+TGG | - | chr8.4:18015148-18015167 | None:intergenic | 45.0% | |
| CAGAAACCAAGGGGAATTCT+CGG | + | chr8.4:18017810-18017829 | MS.gene063501:CDS | 45.0% | |
| CCTATGGACAACAAGGAAGA+AGG | + | chr8.4:18015035-18015054 | MS.gene063501:CDS | 45.0% | |
| CGTTACCTTAGTAATGCCAG+TGG | + | chr8.4:18017094-18017113 | MS.gene063501:intron | 45.0% | |
| CTACCGCAAAATCTACTCCT+GGG | + | chr8.4:18015359-18015378 | MS.gene063501:CDS | 45.0% | |
| CTGTAAAGTTCTTGCCTTGG+TGG | - | chr8.4:18014164-18014183 | None:intergenic | 45.0% | |
| CTTCCACAAGATGTTCGGAA+GGG | - | chr8.4:18014959-18014978 | None:intergenic | 45.0% | |
| CTTGTCCTATGAGAACTCCT+AGG | - | chr8.4:18017841-18017860 | None:intergenic | 45.0% | |
| GAGGACTAGGAGTAGTAGAA+GGG | - | chr8.4:18013680-18013699 | None:intergenic | 45.0% | |
| GAGTGGTGAAAATGCAAAGC+AGG | + | chr8.4:18016903-18016922 | MS.gene063501:intron | 45.0% | |
| GCTTACCACTGGCATTACTA+AGG | - | chr8.4:18017102-18017121 | None:intergenic | 45.0% | |
| GCTTTCAGAAGTTGGAACTC+AGG | - | chr8.4:18016090-18016109 | None:intergenic | 45.0% | |
| GGACAACAAGGAAGAAGGAT+TGG | + | chr8.4:18015040-18015059 | MS.gene063501:CDS | 45.0% | |
| GGACAAGTCAAAATGGAGGT+GGG | + | chr8.4:18017854-18017873 | MS.gene063501:CDS | 45.0% | |
| TACTGGATGCTTAACTGGGA+AGG | + | chr8.4:18014656-18014675 | MS.gene063501:CDS | 45.0% | |
| TCGGTACCTTGCTAGATTGT+TGG | + | chr8.4:18016248-18016267 | MS.gene063501:intron | 45.0% | |
| TCTTCCACAAGATGTTCGGA+AGG | - | chr8.4:18014960-18014979 | None:intergenic | 45.0% | |
| TGAAAATGCAAAGCAGGTGC+TGG | + | chr8.4:18016909-18016928 | MS.gene063501:intron | 45.0% | |
| TGAGAGGCAAGCTGTTATTG+AGG | + | chr8.4:18017560-18017579 | MS.gene063501:CDS | 45.0% | |
| TGAGGACTAGGAGTAGTAGA+AGG | - | chr8.4:18013681-18013700 | None:intergenic | 45.0% | |
| TGGAACTCAGGAACTACAGA+GGG | - | chr8.4:18016078-18016097 | None:intergenic | 45.0% | |
| TGGACTCCACCATGCTTAAT+AGG | - | chr8.4:18015715-18015734 | None:intergenic | 45.0% | |
| TTGCCAACAACTTGAGGACT+AGG | - | chr8.4:18013693-18013712 | None:intergenic | 45.0% | |
| TTGGAACTCAGGAACTACAG+AGG | - | chr8.4:18016079-18016098 | None:intergenic | 45.0% | |
| ! | AAACGGCTCTGTTGTTTGGT+TGG | + | chr8.4:18014211-18014230 | MS.gene063501:intron | 45.0% |
| ! | ACTCCTAGTCCTCAAGTTGT+TGG | + | chr8.4:18013687-18013706 | MS.gene063501:CDS | 45.0% |
| ! | ACTTCTGAAAGCAGCAGTTC+TGG | + | chr8.4:18016098-18016117 | MS.gene063501:intron | 45.0% |
| ! | CCTTCTTCCTTGTTGTCCAT+AGG | - | chr8.4:18015038-18015057 | None:intergenic | 45.0% |
| ! | CTCTGTTGTTTGGTTGGAGT+AGG | + | chr8.4:18014217-18014236 | MS.gene063501:intron | 45.0% |
| ! | CTTCTGAAAGCAGCAGTTCT+GGG | + | chr8.4:18016099-18016118 | MS.gene063501:intron | 45.0% |
| !! | AAGGCATTGCCAACAACTTG+AGG | - | chr8.4:18013699-18013718 | None:intergenic | 45.0% |
| !! | ATCCACATGGTGGACAATCA+CGG | - | chr8.4:18014128-18014147 | None:intergenic | 45.0% |
| !! | GAACTGCTGCTTTCAGAAGT+TGG | - | chr8.4:18016098-18016117 | None:intergenic | 45.0% |
| !! | GACAGGAGAGTATTCAGTTG+AGG | - | chr8.4:18016570-18016589 | None:intergenic | 45.0% |
| !! | TAGTAAGCGATAGCGGAAGA+GGG | + | chr8.4:18017695-18017714 | MS.gene063501:intron | 45.0% |
| !! | TGAAAGGAGAGTGCTCCTTT+GGG | + | chr8.4:18016639-18016658 | MS.gene063501:intron | 45.0% |
| AAAATCTACTCCTGGGCCTG+AGG | + | chr8.4:18015366-18015385 | MS.gene063501:CDS | 50.0% | |
| AGATCCAACTTCTGCAGTCC+AGG | + | chr8.4:18015127-18015146 | MS.gene063501:CDS | 50.0% | |
| CACAAAATCCGGTTGCACCT+AGG | + | chr8.4:18017039-18017058 | MS.gene063501:intron | 50.0% | |
| CAGGCTTCACCTATCACTGT+TGG | + | chr8.4:18017537-18017556 | MS.gene063501:intron | 50.0% | |
| CATTATGGTTCCCCACACCA+TGG | - | chr8.4:18017891-18017910 | None:intergenic | 50.0% | |
| CTAGTAGTGACAGTGCACCA+AGG | + | chr8.4:18015398-18015417 | MS.gene063501:CDS | 50.0% | |
| CTGGGAAGGATAACGTGAGA+AGG | + | chr8.4:18014670-18014689 | MS.gene063501:CDS | 50.0% | |
| GACGACCTAGGAGTTCTCAT+AGG | + | chr8.4:18017833-18017852 | MS.gene063501:CDS | 50.0% | |
| GATTGTTTCCCCCATCATCC+TGG | + | chr8.4:18014275-18014294 | MS.gene063501:intron | 50.0% | |
| GCTACCGCAAAATCTACTCC+TGG | + | chr8.4:18015358-18015377 | MS.gene063501:CDS | 50.0% | |
| GCTCAGGAGTCCTATGAGAA+AGG | + | chr8.4:18014618-18014637 | MS.gene063501:CDS | 50.0% | |
| GGTAGCATGCCGTTGTTCAT+TGG | - | chr8.4:18015344-18015363 | None:intergenic | 50.0% | |
| TAGAACCTGTGCACCAAGTC+AGG | - | chr8.4:18013756-18013775 | None:intergenic | 50.0% | |
| TCAGGAACGTCACTAGTCCT+TGG | - | chr8.4:18015418-18015437 | None:intergenic | 50.0% | |
| TCATCCTGGACTGCAGAAGT+TGG | - | chr8.4:18015134-18015153 | None:intergenic | 50.0% | |
| TCTGCATCAATCGCCTGACT+TGG | + | chr8.4:18013740-18013759 | MS.gene063501:CDS | 50.0% | |
| TCTTGCCTTGGTGGGATCTA+GGG | - | chr8.4:18014155-18014174 | None:intergenic | 50.0% | |
| TGCCTCTCACCAACAGTGAT+AGG | - | chr8.4:18017549-18017568 | None:intergenic | 50.0% | |
| TTCCGTGATTGTCCACCATG+TGG | + | chr8.4:18014123-18014142 | MS.gene063501:intron | 50.0% | |
| TTCTTGCCTTGGTGGGATCT+AGG | - | chr8.4:18014156-18014175 | None:intergenic | 50.0% | |
| ! | AGGCCCAGGAGTAGATTTTG+CGG | - | chr8.4:18015365-18015384 | None:intergenic | 50.0% |
| ! | AGGGTTTTCATCCTCTGCAG+AGG | - | chr8.4:18014991-18015010 | None:intergenic | 50.0% |
| ! | CACCTATCACTGTTGGTGAG+AGG | + | chr8.4:18017544-18017563 | MS.gene063501:CDS | 50.0% |
| ! | CTTGGTGCACAGGTTCTATC+AGG | + | chr8.4:18013758-18013777 | MS.gene063501:CDS | 50.0% |
| ! | CTTGGTGCACTGTCACTACT+AGG | - | chr8.4:18015400-18015419 | None:intergenic | 50.0% |
| !! | CTAGTAAGCGATAGCGGAAG+AGG | + | chr8.4:18017694-18017713 | MS.gene063501:intron | 50.0% |
| !! | GAAAGGAGAGTGCTCCTTTG+GGG | + | chr8.4:18016640-18016659 | MS.gene063501:intron | 50.0% |
| !! | GTGAAAGGAGAGTGCTCCTT+TGG | + | chr8.4:18016638-18016657 | MS.gene063501:intron | 50.0% |
| !!! | TTTGGTGGTGGACGAGGTTT+TGG | + | chr8.4:18017775-18017794 | MS.gene063501:CDS | 50.0% |
| AGATCCTGCAACCTCTGCAG+AGG | + | chr8.4:18014977-18014996 | MS.gene063501:CDS | 55.0% | |
| AGTCAAAATGGAGGTGGGCG+TGG | + | chr8.4:18017859-18017878 | MS.gene063501:CDS | 55.0% | |
| AGTGGTCGGAGTCTAGTGAG+TGG | + | chr8.4:18016886-18016905 | MS.gene063501:intron | 55.0% | |
| CTACTAGGCGCTAATGCCTC+AGG | - | chr8.4:18015385-18015404 | None:intergenic | 55.0% | |
| CTTGCCTTGGTGGGATCTAG+GGG | - | chr8.4:18014154-18014173 | None:intergenic | 55.0% | |
| GCACCCTTCCGAACATCTTG+TGG | + | chr8.4:18014953-18014972 | MS.gene063501:CDS | 55.0% | |
| GCTGTGCACATGCCAGAATC+AGG | + | chr8.4:18014834-18014853 | MS.gene063501:CDS | 55.0% | |
| TCATCCTCTGCAGAGGTTGC+AGG | - | chr8.4:18014984-18015003 | None:intergenic | 55.0% | |
| TGCACTCAAGGCTACCCCAA+AGG | - | chr8.4:18016657-18016676 | None:intergenic | 55.0% | |
| ! | GCTGGTGCCGGGTTGTATTA+TGG | + | chr8.4:18016927-18016946 | MS.gene063501:intron | 55.0% |
| ! | TTGGGGTAGCCTTGAGTGCA+AGG | + | chr8.4:18016657-18016676 | MS.gene063501:intron | 55.0% |
| !! | AATCGCCTGACTTGGTGCAC+AGG | + | chr8.4:18013748-18013767 | MS.gene063501:CDS | 55.0% |
| !! | TAAGCGATAGCGGAAGAGGG+AGG | + | chr8.4:18017698-18017717 | MS.gene063501:CDS | 55.0% |
| AAGAGGTGGTTTCCGAGGCG+AGG | + | chr8.4:18017732-18017751 | MS.gene063501:CDS | 60.0% | |
| AGAGGTGGTTTCCGAGGCGA+GGG | + | chr8.4:18017733-18017752 | MS.gene063501:CDS | 60.0% | |
| AGGCATCCTTCGGGAAGAGG+TGG | + | chr8.4:18017718-18017737 | MS.gene063501:CDS | 60.0% | |
| CAAAATGGAGGTGGGCGTGG+TGG | + | chr8.4:18017862-18017881 | MS.gene063501:CDS | 60.0% | |
| CAGACGCCACTCTTGCAGCT+CGG | - | chr8.4:18015315-18015334 | None:intergenic | 60.0% | |
| CGGAAACCACCTCTTCCCGA+AGG | - | chr8.4:18017727-18017746 | None:intergenic | 60.0% | |
| GATCTAGGGGCGGATCCACA+TGG | - | chr8.4:18014141-18014160 | None:intergenic | 60.0% | |
| GGGAATTCTCGGGACGACCT+AGG | + | chr8.4:18017821-18017840 | MS.gene063501:CDS | 60.0% | |
| GTCGTCCCGAGAATTCCCCT+TGG | - | chr8.4:18017819-18017838 | None:intergenic | 60.0% | |
| GTTTCCGAGGCGAGGGTTTC+CGG | + | chr8.4:18017740-18017759 | MS.gene063501:CDS | 60.0% | |
| TCGGGAAGAGGTGGTTTCCG+AGG | + | chr8.4:18017727-18017746 | MS.gene063501:CDS | 60.0% | |
| TTTCCGAGGCGAGGGTTTCC+GGG | + | chr8.4:18017741-18017760 | MS.gene063501:CDS | 60.0% | |
| !! | CGGAAGAGGGAGGCATCCTT+CGG | + | chr8.4:18017708-18017727 | MS.gene063501:CDS | 60.0% |
| !! | GGAAGAGGGAGGCATCCTTC+GGG | + | chr8.4:18017709-18017728 | MS.gene063501:CDS | 60.0% |
| !! | GGGAGATTTGGTGGTGGACG+AGG | + | chr8.4:18017769-18017788 | MS.gene063501:CDS | 60.0% |
| !! | TGCAAAGCAGGTGCTGGTGC+CGG | + | chr8.4:18016915-18016934 | MS.gene063501:intron | 60.0% |
| CACCAAATCTCCCACGCCCC+CGG | - | chr8.4:18017762-18017781 | None:intergenic | 65.0% | |
| CTAGGGGCGGATCCACATGG+TGG | - | chr8.4:18014138-18014157 | None:intergenic | 65.0% | |
| GCCACTCTTGCAGCTCGGCT+GGG | - | chr8.4:18015310-18015329 | None:intergenic | 65.0% | |
| GCCTTGGTGGGATCTAGGGG+CGG | - | chr8.4:18014151-18014170 | None:intergenic | 65.0% | |
| TCCCAGCCGAGCTGCAAGAG+TGG | + | chr8.4:18015306-18015325 | MS.gene063501:CDS | 65.0% | |
| TCCGCCCCTAGATCCCACCA+AGG | + | chr8.4:18014147-18014166 | MS.gene063501:intron | 65.0% | |
| TTCCGAGGCGAGGGTTTCCG+GGG | + | chr8.4:18017742-18017761 | MS.gene063501:CDS | 65.0% | |
| ! | TTCCGGGGGCGTGGGAGATT+TGG | + | chr8.4:18017757-18017776 | MS.gene063501:CDS | 65.0% |
| !! | CGTGGTGGACGCCATGGTGT+GGG | + | chr8.4:18017877-18017896 | MS.gene063501:CDS | 65.0% |
| !! | GCAAAGCAGGTGCTGGTGCC+GGG | + | chr8.4:18016916-18016935 | MS.gene063501:intron | 65.0% |
| !! | GGGAGGCATCCTTCGGGAAG+AGG | + | chr8.4:18017715-18017734 | MS.gene063501:CDS | 65.0% |
| !! | GGGCGTGGGAGATTTGGTGG+TGG | + | chr8.4:18017763-18017782 | MS.gene063501:CDS | 65.0% |
| !! | GTGGTGGACGCCATGGTGTG+GGG | + | chr8.4:18017878-18017897 | MS.gene063501:CDS | 65.0% |
| CGCCACTCTTGCAGCTCGGC+TGG | - | chr8.4:18015311-18015330 | None:intergenic | 70.0% | |
| GGCGCTAATGCCTCAGGCCC+AGG | - | chr8.4:18015379-18015398 | None:intergenic | 70.0% | |
| TCCGAGGCGAGGGTTTCCGG+GGG | + | chr8.4:18017743-18017762 | MS.gene063501:CDS | 70.0% | |
| ! | CGGGGGCGTGGGAGATTTGG+TGG | + | chr8.4:18017760-18017779 | MS.gene063501:CDS | 70.0% |
| !! | GCGTGGTGGACGCCATGGTG+TGG | + | chr8.4:18017876-18017895 | MS.gene063501:CDS | 70.0% |
| GCCCCCGGAAACCCTCGCCT+CGG | - | chr8.4:18017747-18017766 | None:intergenic | 75.0% | |
| ! | GCGAGGGTTTCCGGGGGCGT+GGG | + | chr8.4:18017749-18017768 | MS.gene063501:CDS | 75.0% |
| !! | GGTGGGCGTGGTGGACGCCA+TGG | + | chr8.4:18017871-18017890 | MS.gene063501:CDS | 75.0% |
| ! | GGCGAGGGTTTCCGGGGGCG+TGG | + | chr8.4:18017748-18017767 | MS.gene063501:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 18013657 | 18017933 | 18013657 | ID=MS.gene063501 |
| chr8.4 | mRNA | 18013657 | 18017933 | 18013657 | ID=MS.gene063501.t1;Parent=MS.gene063501 |
| chr8.4 | exon | 18013657 | 18013842 | 18013657 | ID=MS.gene063501.t1.exon1;Parent=MS.gene063501.t1 |
| chr8.4 | CDS | 18013657 | 18013842 | 18013657 | ID=cds.MS.gene063501.t1;Parent=MS.gene063501.t1 |
| chr8.4 | exon | 18014552 | 18014855 | 18014552 | ID=MS.gene063501.t1.exon2;Parent=MS.gene063501.t1 |
| chr8.4 | CDS | 18014552 | 18014855 | 18014552 | ID=cds.MS.gene063501.t1;Parent=MS.gene063501.t1 |
| chr8.4 | exon | 18014946 | 18015181 | 18014946 | ID=MS.gene063501.t1.exon3;Parent=MS.gene063501.t1 |
| chr8.4 | CDS | 18014946 | 18015181 | 18014946 | ID=cds.MS.gene063501.t1;Parent=MS.gene063501.t1 |
| chr8.4 | exon | 18015268 | 18015442 | 18015268 | ID=MS.gene063501.t1.exon4;Parent=MS.gene063501.t1 |
| chr8.4 | CDS | 18015268 | 18015442 | 18015268 | ID=cds.MS.gene063501.t1;Parent=MS.gene063501.t1 |
| chr8.4 | exon | 18015626 | 18015750 | 18015626 | ID=MS.gene063501.t1.exon5;Parent=MS.gene063501.t1 |
| chr8.4 | CDS | 18015626 | 18015750 | 18015626 | ID=cds.MS.gene063501.t1;Parent=MS.gene063501.t1 |
| chr8.4 | exon | 18015842 | 18015904 | 18015842 | ID=MS.gene063501.t1.exon6;Parent=MS.gene063501.t1 |
| chr8.4 | CDS | 18015842 | 18015904 | 18015842 | ID=cds.MS.gene063501.t1;Parent=MS.gene063501.t1 |
| chr8.4 | exon | 18017540 | 18017603 | 18017540 | ID=MS.gene063501.t1.exon7;Parent=MS.gene063501.t1 |
| chr8.4 | CDS | 18017540 | 18017603 | 18017540 | ID=cds.MS.gene063501.t1;Parent=MS.gene063501.t1 |
| chr8.4 | exon | 18017698 | 18017933 | 18017698 | ID=MS.gene063501.t1.exon8;Parent=MS.gene063501.t1 |
| chr8.4 | CDS | 18017698 | 18017933 | 18017698 | ID=cds.MS.gene063501.t1;Parent=MS.gene063501.t1 |
| Gene Sequence |
| Protein sequence |
