Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044456.t1 | XP_013458005.1 | 97.4 | 462 | 11 | 1 | 1 | 462 | 1 | 461 | 1.70E-232 | 815.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044456.t1 | Q9FME2 | 53.4 | 380 | 160 | 8 | 1 | 377 | 1 | 366 | 3.2e-91 | 337.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044456.t1 | A0A072URQ4 | 97.4 | 462 | 11 | 1 | 1 | 462 | 1 | 461 | 1.2e-232 | 815.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene044456 | MS.gene069831 | PPI |
| MS.gene044456 | MS.gene027297 | PPI |
| MS.gene044456 | MS.gene84431 | PPI |
| MS.gene044456 | MS.gene87572 | PPI |
| MS.gene044456 | MS.gene064286 | PPI |
| MS.gene044456 | MS.gene051725 | PPI |
| MS.gene044456 | MS.gene022992 | PPI |
| MS.gene044456 | MS.gene86635 | PPI |
| MS.gene044456 | MS.gene59855 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044456.t1 | MTR_4g109640 | 97.619 | 462 | 10 | 1 | 1 | 462 | 1 | 461 | 0.0 | 921 |
| MS.gene044456.t1 | MTR_4g109640 | 97.245 | 363 | 9 | 1 | 1 | 363 | 1 | 362 | 0.0 | 723 |
| MS.gene044456.t1 | MTR_4g109640 | 96.185 | 367 | 13 | 1 | 1 | 367 | 1 | 366 | 0.0 | 722 |
| MS.gene044456.t1 | MTR_7g013840 | 50.119 | 419 | 187 | 9 | 1 | 403 | 1 | 413 | 5.01e-123 | 367 |
| MS.gene044456.t1 | MTR_7g013840 | 50.000 | 420 | 187 | 10 | 1 | 403 | 1 | 414 | 3.81e-121 | 362 |
| MS.gene044456.t1 | MTR_7g055610 | 41.300 | 477 | 233 | 12 | 1 | 455 | 6 | 457 | 7.74e-98 | 303 |
| MS.gene044456.t1 | MTR_7g057520 | 42.333 | 463 | 226 | 10 | 12 | 455 | 10 | 450 | 1.39e-97 | 303 |
| MS.gene044456.t1 | MTR_4g083150 | 41.372 | 481 | 222 | 15 | 1 | 445 | 1 | 457 | 2.66e-88 | 277 |
| MS.gene044456.t1 | MTR_7g098440 | 34.312 | 443 | 252 | 15 | 17 | 433 | 13 | 442 | 2.14e-51 | 180 |
| MS.gene044456.t1 | MTR_1g045800 | 31.638 | 354 | 204 | 9 | 17 | 345 | 14 | 354 | 6.01e-37 | 140 |
| MS.gene044456.t1 | MTR_8g080790 | 33.607 | 122 | 73 | 4 | 14 | 132 | 3 | 119 | 6.40e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044456.t1 | AT5G60980 | 51.893 | 449 | 189 | 12 | 1 | 443 | 1 | 428 | 1.18e-119 | 358 |
| MS.gene044456.t1 | AT5G60980 | 51.893 | 449 | 189 | 12 | 1 | 443 | 1 | 428 | 1.18e-119 | 358 |
| MS.gene044456.t1 | AT5G60980 | 51.778 | 450 | 189 | 13 | 1 | 443 | 1 | 429 | 5.88e-118 | 353 |
| MS.gene044456.t1 | AT5G60980 | 51.778 | 450 | 189 | 13 | 1 | 443 | 1 | 429 | 5.88e-118 | 353 |
| MS.gene044456.t1 | AT3G25150 | 41.244 | 434 | 200 | 11 | 8 | 421 | 10 | 408 | 6.20e-86 | 272 |
| MS.gene044456.t1 | AT3G25150 | 41.244 | 434 | 200 | 11 | 8 | 421 | 109 | 507 | 1.44e-84 | 271 |
| MS.gene044456.t1 | AT5G48650 | 36.136 | 440 | 223 | 18 | 14 | 417 | 13 | 430 | 1.23e-63 | 213 |
| MS.gene044456.t1 | AT2G03640 | 34.537 | 443 | 225 | 14 | 9 | 427 | 5 | 406 | 2.80e-63 | 211 |
| MS.gene044456.t1 | AT2G03640 | 34.537 | 443 | 225 | 14 | 9 | 427 | 5 | 406 | 2.80e-63 | 211 |
| MS.gene044456.t1 | AT2G03640 | 34.537 | 443 | 225 | 14 | 9 | 427 | 5 | 406 | 2.80e-63 | 211 |
| MS.gene044456.t1 | AT2G03640 | 34.685 | 444 | 224 | 15 | 9 | 427 | 5 | 407 | 5.30e-63 | 210 |
| MS.gene044456.t1 | AT1G13730 | 34.118 | 425 | 208 | 13 | 1 | 406 | 1 | 372 | 5.68e-60 | 202 |
| MS.gene044456.t1 | AT1G13730 | 34.118 | 425 | 208 | 13 | 1 | 406 | 1 | 372 | 5.68e-60 | 202 |
| MS.gene044456.t1 | AT2G03640 | 32.340 | 470 | 230 | 14 | 9 | 427 | 5 | 437 | 7.49e-59 | 200 |
| MS.gene044456.t1 | AT1G69250 | 33.933 | 389 | 212 | 10 | 6 | 379 | 2 | 360 | 4.34e-57 | 195 |
| MS.gene044456.t1 | AT1G69250 | 34.211 | 342 | 186 | 8 | 10 | 342 | 6 | 317 | 2.45e-47 | 168 |
| MS.gene044456.t1 | AT5G43960 | 34.074 | 405 | 216 | 14 | 11 | 379 | 3 | 392 | 4.55e-46 | 166 |
| MS.gene044456.t1 | AT3G07250 | 28.537 | 410 | 239 | 14 | 12 | 407 | 5 | 374 | 8.87e-35 | 137 |
| MS.gene044456.t1 | AT5G43960 | 33.237 | 346 | 183 | 12 | 68 | 379 | 2 | 333 | 6.02e-33 | 129 |
| MS.gene044456.t1 | AT3G55540 | 37.226 | 137 | 78 | 5 | 15 | 145 | 30 | 164 | 2.63e-18 | 86.3 |
| MS.gene044456.t1 | AT3G24463 | 40.952 | 105 | 56 | 4 | 15 | 114 | 9 | 112 | 3.01e-15 | 72.8 |
| MS.gene044456.t1 | AT1G27970 | 34.146 | 123 | 71 | 5 | 14 | 132 | 6 | 122 | 6.53e-11 | 60.1 |
Find 128 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAACTTCATCACCATTATT+AGG | 0.140835 | 8.1:-16029818 | None:intergenic |
| GTTTCCGAGGCGAGGGTTTC+CGG | 0.175478 | 8.1:+16032548 | MS.gene044456:CDS |
| AGTTCAATTGTTGCATTAAA+TGG | 0.198571 | 8.1:-16030471 | None:intergenic |
| TTAGTTACTGGATGCTTAAC+TGG | 0.242440 | 8.1:+16029461 | MS.gene044456:CDS |
| TTTCAGCATGGGTTCTGTTT+TGG | 0.246084 | 8.1:+16030646 | MS.gene044456:intron |
| ATGTCTTAAATGACGTCTTT+AGG | 0.254497 | 8.1:+16029549 | MS.gene044456:CDS |
| TTTGGTGGTGGACGAGGTTT+TGG | 0.272425 | 8.1:+16032583 | MS.gene044456:CDS |
| TGGACTCCACCATGCTTAAT+AGG | 0.272831 | 8.1:-16030522 | None:intergenic |
| AAACTTCATCACCATTATTA+GGG | 0.277499 | 8.1:-16029817 | None:intergenic |
| CGCCACTCTTGCAGCTCGGC+TGG | 0.292730 | 8.1:-16030118 | None:intergenic |
| AATAATGTCATCAATGAAAA+TGG | 0.295322 | 8.1:+16029617 | MS.gene044456:CDS |
| CTTGGTGCACAGGTTCTATC+AGG | 0.310789 | 8.1:+16028568 | MS.gene044456:CDS |
| TCATCCTCTGCAGAGGTTGC+AGG | 0.311559 | 8.1:-16029791 | None:intergenic |
| TGGCAAGTTCCGTATATATA+TGG | 0.319559 | 8.1:-16030451 | None:intergenic |
| CTGTACAATCTTCATAGTTC+AGG | 0.328630 | 8.1:-16029385 | None:intergenic |
| TTTCCGAGGCGAGGGTTTCC+GGG | 0.337841 | 8.1:+16032549 | MS.gene044456:CDS |
| AAGCCATACTAACCTGATTC+TGG | 0.350527 | 8.1:-16029656 | None:intergenic |
| AGACCTTACTGCTTCTTACT+TGG | 0.360516 | 8.1:-16030542 | None:intergenic |
| GGGTAGATGGTGTAACATTA+TGG | 0.367114 | 8.1:-16032711 | None:intergenic |
| TGAGGACTAGGAGTAGTAGA+AGG | 0.392176 | 8.1:-16028488 | None:intergenic |
| TATGCTCACACTGGGGTAGA+TGG | 0.396834 | 8.1:-16032724 | None:intergenic |
| CGTGGTGGACGCCATGGTGT+GGG | 0.400855 | 8.1:+16032685 | MS.gene044456:CDS |
| GAGGATGAAAACCCTAATAA+TGG | 0.402358 | 8.1:+16029806 | MS.gene044456:CDS |
| TCTCATAGGACAAGTCAAAA+TGG | 0.403541 | 8.1:+16032655 | MS.gene044456:CDS |
| CATCAATATACACCTTCTTC+AGG | 0.411054 | 8.1:-16030243 | None:intergenic |
| CGGAAGAGGGAGGCATCCTT+CGG | 0.427046 | 8.1:+16032516 | MS.gene044456:CDS |
| GGTAGCATGCCGTTGTTCAT+TGG | 0.428270 | 8.1:-16030151 | None:intergenic |
| ATGAAAAGTAACACAGCATC+TGG | 0.431023 | 8.1:+16030081 | MS.gene044456:CDS |
| TCATTCTCACTTAGATCATT+AGG | 0.431566 | 8.1:-16029899 | None:intergenic |
| TAGAACCTGTGCACCAAGTC+AGG | 0.435047 | 8.1:-16028563 | None:intergenic |
| TTCTGTGCAAAATGCACTTA+AGG | 0.437793 | 8.1:+16030693 | MS.gene044456:CDS |
| GCTGTGCACATGCCAGAATC+AGG | 0.445218 | 8.1:+16029644 | MS.gene044456:CDS |
| GCGTGGTGGACGCCATGGTG+TGG | 0.451351 | 8.1:+16032684 | MS.gene044456:CDS |
| CAGAAACCAAGGGGAATTCT+CGG | 0.453158 | 8.1:+16032618 | MS.gene044456:CDS |
| AACTATCACACCTTTCTCAT+AGG | 0.460268 | 8.1:-16029438 | None:intergenic |
| AAGGTCATTCCATATATATA+CGG | 0.461746 | 8.1:+16030442 | MS.gene044456:CDS |
| GGCGCTAATGCCTCAGGCCC+AGG | 0.463407 | 8.1:-16030186 | None:intergenic |
| CTAGTAAGCGATAGCGGAAG+AGG | 0.464753 | 8.1:+16032502 | MS.gene044456:intron |
| AGTTGTTGGCAATGCCTTTG+TGG | 0.464870 | 8.1:+16028511 | MS.gene044456:CDS |
| TGCCTCTCACCAACAGTGAT+AGG | 0.466058 | 8.1:-16032356 | None:intergenic |
| AAGAGGTGGTTTCCGAGGCG+AGG | 0.467895 | 8.1:+16032540 | MS.gene044456:CDS |
| AGGATCTTCCACAAGATGTT+CGG | 0.469823 | 8.1:-16029771 | None:intergenic |
| AGATCCAACTTCTGCAGTCC+AGG | 0.473884 | 8.1:+16029937 | MS.gene044456:CDS |
| TGATGAAGTTTATTATCCTA+TGG | 0.474945 | 8.1:+16029829 | MS.gene044456:CDS |
| GGAAGAGGGAGGCATCCTTC+GGG | 0.476657 | 8.1:+16032517 | MS.gene044456:CDS |
| GGTGGGCGTGGTGGACGCCA+TGG | 0.480860 | 8.1:+16032679 | MS.gene044456:CDS |
| CAGGCTTCACCTATCACTGT+TGG | 0.481423 | 8.1:+16032347 | MS.gene044456:intron |
| CTTGGTGCACTGTCACTACT+AGG | 0.485500 | 8.1:-16030207 | None:intergenic |
| ATTGATGACATTATTTATTG+AGG | 0.486265 | 8.1:-16029609 | None:intergenic |
| GGGAGGCATCCTTCGGGAAG+AGG | 0.486465 | 8.1:+16032523 | MS.gene044456:CDS |
| GGGAGATTTGGTGGTGGACG+AGG | 0.486577 | 8.1:+16032577 | MS.gene044456:CDS |
| ATGTCTTTCGTGCATCATCC+TGG | 0.491934 | 8.1:-16029955 | None:intergenic |
| GCCACTCTTGCAGCTCGGCT+GGG | 0.494495 | 8.1:-16030117 | None:intergenic |
| ACTCCTAGTCCTCAAGTTGT+TGG | 0.497836 | 8.1:+16028497 | MS.gene044456:CDS |
| ACATAATATCCTTTGTCTTG+TGG | 0.499491 | 8.1:-16029530 | None:intergenic |
| GCTACCGCAAAATCTACTCC+TGG | 0.499593 | 8.1:+16030168 | MS.gene044456:CDS |
| CCTTCTTCCTTGTTGTCCAT+AGG | 0.500348 | 8.1:-16029845 | None:intergenic |
| AACAATTGAACTTCTTGAAG+AGG | 0.503256 | 8.1:+16030482 | MS.gene044456:CDS |
| TCAGGAACGTCACTAGTCCT+TGG | 0.504045 | 8.1:-16030225 | None:intergenic |
| CACCAAATCTCCCACGCCCC+CGG | 0.511878 | 8.1:-16032567 | None:intergenic |
| TGTACAATCTTCATAGTTCA+GGG | 0.513254 | 8.1:-16029384 | None:intergenic |
| AGAGGTGGTTTCCGAGGCGA+GGG | 0.514716 | 8.1:+16032541 | MS.gene044456:CDS |
| TCATCCTGGACTGCAGAAGT+TGG | 0.514718 | 8.1:-16029941 | None:intergenic |
| AATCGCCTGACTTGGTGCAC+AGG | 0.516784 | 8.1:+16028558 | MS.gene044456:CDS |
| GGACAACAAGGAAGAAGGAT+TGG | 0.517698 | 8.1:+16029850 | MS.gene044456:CDS |
| AGGATTGGTTATTGATGAAG+AGG | 0.520461 | 8.1:+16029865 | MS.gene044456:CDS |
| CCTATGGACAACAAGGAAGA+AGG | 0.522127 | 8.1:+16029845 | MS.gene044456:CDS |
| CTACTAGGCGCTAATGCCTC+AGG | 0.526959 | 8.1:-16030192 | None:intergenic |
| GTGGTGGACGCCATGGTGTG+GGG | 0.532361 | 8.1:+16032686 | MS.gene044456:CDS |
| TCTGCATCAATCGCCTGACT+TGG | 0.536954 | 8.1:+16028550 | MS.gene044456:CDS |
| AGTCAAAATGGAGGTGGGCG+TGG | 0.538312 | 8.1:+16032667 | MS.gene044456:CDS |
| GCACCCTTCCGAACATCTTG+TGG | 0.539517 | 8.1:+16029763 | MS.gene044456:CDS |
| TTGCCAACAACTTGAGGACT+AGG | 0.541881 | 8.1:-16028500 | None:intergenic |
| TTAACCAATATGCTCACACT+GGG | 0.542047 | 8.1:-16032732 | None:intergenic |
| AGGACAAGTCAAAATGGAGG+TGG | 0.544941 | 8.1:+16032661 | MS.gene044456:CDS |
| TCCCAGCCGAGCTGCAAGAG+TGG | 0.546033 | 8.1:+16030116 | MS.gene044456:CDS |
| ATTAACCAATATGCTCACAC+TGG | 0.548586 | 8.1:-16032733 | None:intergenic |
| CTTGTCCTATGAGAACTCCT+AGG | 0.549687 | 8.1:-16032646 | None:intergenic |
| ACTAGTGACGTTCCTGAAGA+AGG | 0.551265 | 8.1:+16030231 | MS.gene044456:CDS |
| GGGCGTGGGAGATTTGGTGG+TGG | 0.555524 | 8.1:+16032571 | MS.gene044456:CDS |
| AGAAACCAAGGGGAATTCTC+GGG | 0.557016 | 8.1:+16032619 | MS.gene044456:CDS |
| AGAAATGAATTCAGAAACCA+AGG | 0.559653 | 8.1:+16032607 | MS.gene044456:CDS |
| AGGCATCCTTCGGGAAGAGG+TGG | 0.563265 | 8.1:+16032526 | MS.gene044456:CDS |
| GCTCAGGAGTCCTATGAGAA+AGG | 0.568276 | 8.1:+16029428 | MS.gene044456:CDS |
| TACTGGATGCTTAACTGGGA+AGG | 0.573370 | 8.1:+16029466 | MS.gene044456:CDS |
| TCGGGAAGAGGTGGTTTCCG+AGG | 0.574206 | 8.1:+16032535 | MS.gene044456:CDS |
| AGTCCAAGTAAGAAGCAGTA+AGG | 0.574728 | 8.1:+16030539 | MS.gene044456:CDS |
| GTCGTCCCGAGAATTCCCCT+TGG | 0.579480 | 8.1:-16032624 | None:intergenic |
| CAGACGCCACTCTTGCAGCT+CGG | 0.581183 | 8.1:-16030122 | None:intergenic |
| TGACGTCTTTAGGTACATTG+AGG | 0.581193 | 8.1:+16029559 | MS.gene044456:CDS |
| GGGAATTCTCGGGACGACCT+AGG | 0.583471 | 8.1:+16032629 | MS.gene044456:CDS |
| GAGGACTAGGAGTAGTAGAA+GGG | 0.589077 | 8.1:-16028487 | None:intergenic |
| CTACCGCAAAATCTACTCCT+GGG | 0.589382 | 8.1:+16030169 | MS.gene044456:CDS |
| TAGTTACTGGATGCTTAACT+GGG | 0.594894 | 8.1:+16029462 | MS.gene044456:CDS |
| TTGAGGCAGAACTTAACTGT+GGG | 0.595995 | 8.1:-16029592 | None:intergenic |
| AAAATCTACTCCTGGGCCTG+AGG | 0.598211 | 8.1:+16030176 | MS.gene044456:CDS |
| CACCTATCACTGTTGGTGAG+AGG | 0.598308 | 8.1:+16032354 | MS.gene044456:CDS |
| AAGGCATTGCCAACAACTTG+AGG | 0.599295 | 8.1:-16028506 | None:intergenic |
| TTCCGAGGCGAGGGTTTCCG+GGG | 0.602548 | 8.1:+16032550 | MS.gene044456:CDS |
| TGAGAGGCAAGCTGTTATTG+AGG | 0.604470 | 8.1:+16032370 | MS.gene044456:CDS |
| TCTTCCACAAGATGTTCGGA+AGG | 0.605079 | 8.1:-16029767 | None:intergenic |
| CAAAATGGAGGTGGGCGTGG+TGG | 0.606054 | 8.1:+16032670 | MS.gene044456:CDS |
| AAATTTGGTCCTATTAAGCA+TGG | 0.606114 | 8.1:+16030513 | MS.gene044456:CDS |
| CTGGGAAGGATAACGTGAGA+AGG | 0.608352 | 8.1:+16029480 | MS.gene044456:CDS |
| CTTATTCTAGTAAGCGATAG+CGG | 0.609149 | 8.1:+16032496 | MS.gene044456:intron |
| TAGTAAGCGATAGCGGAAGA+GGG | 0.613022 | 8.1:+16032503 | MS.gene044456:intron |
| GAAATGAATTCAGAAACCAA+GGG | 0.613900 | 8.1:+16032608 | MS.gene044456:CDS |
| GACGACCTAGGAGTTCTCAT+AGG | 0.620067 | 8.1:+16032641 | MS.gene044456:CDS |
| AGATCCTGCAACCTCTGCAG+AGG | 0.627391 | 8.1:+16029787 | MS.gene044456:CDS |
| CGGAAACCACCTCTTCCCGA+AGG | 0.627436 | 8.1:-16032532 | None:intergenic |
| GGACAAGTCAAAATGGAGGT+GGG | 0.630012 | 8.1:+16032662 | MS.gene044456:CDS |
| GTGATAATATTGCTCCACAA+AGG | 0.638427 | 8.1:-16028525 | None:intergenic |
| TTTGGTCCTATTAAGCATGG+TGG | 0.646743 | 8.1:+16030516 | MS.gene044456:CDS |
| ATTGAGGCAGAACTTAACTG+TGG | 0.647373 | 8.1:-16029593 | None:intergenic |
| TTGAGTAGATCAGACAGCAA+TGG | 0.654618 | 8.1:+16028602 | MS.gene044456:CDS |
| TAAGCGATAGCGGAAGAGGG+AGG | 0.655900 | 8.1:+16032506 | MS.gene044456:CDS |
| CATTATGGTTCCCCACACCA+TGG | 0.658602 | 8.1:-16032696 | None:intergenic |
| TCCGAGGCGAGGGTTTCCGG+GGG | 0.660506 | 8.1:+16032551 | MS.gene044456:CDS |
| TTCTCACTTAGATCATTAGG+CGG | 0.670518 | 8.1:-16029896 | None:intergenic |
| CTTCCACAAGATGTTCGGAA+GGG | 0.681793 | 8.1:-16029766 | None:intergenic |
| CATAGGACAAGTCAAAATGG+AGG | 0.683264 | 8.1:+16032658 | MS.gene044456:CDS |
| AAATGAATTCAGAAACCAAG+GGG | 0.690944 | 8.1:+16032609 | MS.gene044456:CDS |
| CTGCTAAATCCAATGAACAA+CGG | 0.694097 | 8.1:+16030142 | MS.gene044456:CDS |
| TTATTATCCTATGGACAACA+AGG | 0.695300 | 8.1:+16029838 | MS.gene044456:CDS |
| TGTCATCAATGAAAATGGTG+AGG | 0.702625 | 8.1:+16029622 | MS.gene044456:CDS |
| GAAAAGATATCGAGTACACG+AGG | 0.731969 | 8.1:+16032392 | MS.gene044456:CDS |
| CTAGTAGTGACAGTGCACCA+AGG | 0.746793 | 8.1:+16030208 | MS.gene044456:CDS |
| TAACCAATATGCTCACACTG+GGG | 0.814579 | 8.1:-16032731 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAATTATAGTTAAATTAT+AGG | + | chr8.1:16028863-16028882 | MS.gene044456:intron | 10.0% |
| !! | ATTATAGTTAAATTATAGGT+AGG | + | chr8.1:16028867-16028886 | MS.gene044456:intron | 15.0% |
| !!! | AACTTTAATTTTGAATAAAC+TGG | + | chr8.1:16030811-16030830 | MS.gene044456:intron | 15.0% |
| !!! | ATCTTTTAGGTTTTATAAAA+CGG | + | chr8.1:16029004-16029023 | MS.gene044456:intron | 15.0% |
| !!! | CTAAATTTAATTTCATTTTC+AGG | + | chr8.1:16032328-16032347 | MS.gene044456:intron | 15.0% |
| !!! | TTTTTTTAATCATATTACCA+AGG | + | chr8.1:16032432-16032451 | MS.gene044456:intron | 15.0% |
| !! | AAAATCAAAACAATCAGATT+GGG | - | chr8.1:16031177-16031196 | None:intergenic | 20.0% |
| !! | AATAATGTCATCAATGAAAA+TGG | + | chr8.1:16029617-16029636 | MS.gene044456:CDS | 20.0% |
| !! | ATCATTGTTCTATATACATT+TGG | - | chr8.1:16028718-16028737 | None:intergenic | 20.0% |
| !! | ATTATTATGATTGATTGTCA+TGG | - | chr8.1:16031774-16031793 | None:intergenic | 20.0% |
| !! | GTTTATAACTTCATATATTC+TGG | + | chr8.1:16030365-16030384 | MS.gene044456:intron | 20.0% |
| !! | TAAAATCAAAACAATCAGAT+TGG | - | chr8.1:16031178-16031197 | None:intergenic | 20.0% |
| !! | TGTAATAAATAGTTCTTTCT+TGG | - | chr8.1:16030777-16030796 | None:intergenic | 20.0% |
| !!! | AAAAAACATAAACTGTTTTC+TGG | + | chr8.1:16031112-16031131 | MS.gene044456:intron | 20.0% |
| !!! | AAAGTTTTCTCAAATCAAAT+AGG | - | chr8.1:16031967-16031986 | None:intergenic | 20.0% |
| !!! | AGTTTTTGTATTTACTGTAT+CGG | + | chr8.1:16031039-16031058 | MS.gene044456:intron | 20.0% |
| !!! | ATTGATGACATTATTTATTG+AGG | - | chr8.1:16029612-16029631 | None:intergenic | 20.0% |
| !!! | TTGATTTGAGAAAACTTTAT+TGG | + | chr8.1:16031969-16031988 | MS.gene044456:intron | 20.0% |
| ! | AAACTTCATCACCATTATTA+GGG | - | chr8.1:16029820-16029839 | None:intergenic | 25.0% |
| ! | AAGGTCATTCCATATATATA+CGG | + | chr8.1:16030442-16030461 | MS.gene044456:CDS | 25.0% |
| ! | AATAAAACTAATTGCTTCCT+AGG | - | chr8.1:16031869-16031888 | None:intergenic | 25.0% |
| ! | ACAATAGAATGATTCTAACT+AGG | - | chr8.1:16031613-16031632 | None:intergenic | 25.0% |
| ! | AGTAAAAAACCATTCGATAT+AGG | - | chr8.1:16032155-16032174 | None:intergenic | 25.0% |
| ! | AGTTCAATTGTTGCATTAAA+TGG | - | chr8.1:16030474-16030493 | None:intergenic | 25.0% |
| ! | ATAAAGGATACAAAAGATCA+GGG | - | chr8.1:16029273-16029292 | None:intergenic | 25.0% |
| ! | ATAATAATACTATGCAGAAG+GGG | + | chr8.1:16031786-16031805 | MS.gene044456:intron | 25.0% |
| ! | ATATTATCCCATTCAATTGA+TGG | + | chr8.1:16031529-16031548 | MS.gene044456:intron | 25.0% |
| ! | CATAATAATACTATGCAGAA+GGG | + | chr8.1:16031785-16031804 | MS.gene044456:intron | 25.0% |
| ! | CTACTTCAGAATAATTTGAA+TGG | - | chr8.1:16032230-16032249 | None:intergenic | 25.0% |
| ! | GAAGATTGATCAACAAAATT+GGG | - | chr8.1:16031588-16031607 | None:intergenic | 25.0% |
| ! | TAAACTTCATCACCATTATT+AGG | - | chr8.1:16029821-16029840 | None:intergenic | 25.0% |
| ! | TATGCGAGTACAAATAATAT+AGG | - | chr8.1:16032188-16032207 | None:intergenic | 25.0% |
| ! | TCATAATAATACTATGCAGA+AGG | + | chr8.1:16031784-16031803 | MS.gene044456:intron | 25.0% |
| ! | TGAAGATTGATCAACAAAAT+TGG | - | chr8.1:16031589-16031608 | None:intergenic | 25.0% |
| ! | TGATGAAGTTTATTATCCTA+TGG | + | chr8.1:16029829-16029848 | MS.gene044456:CDS | 25.0% |
| ! | TTTGTTACCATCAATTGAAT+GGG | - | chr8.1:16031539-16031558 | None:intergenic | 25.0% |
| !! | ACTTTTGAATTGATAAGTAG+TGG | + | chr8.1:16030837-16030856 | MS.gene044456:intron | 25.0% |
| !! | TGTAAGCTAATCTGTATTTT+TGG | + | chr8.1:16030619-16030638 | MS.gene044456:intron | 25.0% |
| !! | TGTAATTTTCCTATATCGAA+TGG | + | chr8.1:16032143-16032162 | MS.gene044456:intron | 25.0% |
| !! | TTCAACTGTTGATTATAGTT+TGG | + | chr8.1:16030730-16030749 | MS.gene044456:intron | 25.0% |
| !! | TTTTCAACTCATTAACTAGA+AGG | + | chr8.1:16029321-16029340 | MS.gene044456:intron | 25.0% |
| !! | TTTTCCATATACCAAAAGAA+AGG | + | chr8.1:16031662-16031681 | MS.gene044456:intron | 25.0% |
| !! | TTTTGTTACCATCAATTGAA+TGG | - | chr8.1:16031540-16031559 | None:intergenic | 25.0% |
| !!! | ATAGCCTCTTTTTCATTAAT+GGG | - | chr8.1:16030333-16030352 | None:intergenic | 25.0% |
| !!! | GAAGAGGTTTTTAAGAAATT+TGG | + | chr8.1:16030498-16030517 | MS.gene044456:CDS | 25.0% |
| !!! | GTTTTATTGGAAAGTAGATA+CGG | + | chr8.1:16031881-16031900 | MS.gene044456:intron | 25.0% |
| !!! | TAGGAAGCAATTAGTTTTAT+TGG | + | chr8.1:16031868-16031887 | MS.gene044456:intron | 25.0% |
| !!! | TATAGCCTCTTTTTCATTAA+TGG | - | chr8.1:16030334-16030353 | None:intergenic | 25.0% |
| !!! | TCATGATATCTTTCTAGTTA+CGG | + | chr8.1:16028752-16028771 | MS.gene044456:intron | 25.0% |
| AAAATAAACCACAAGTACCA+GGG | - | chr8.1:16029305-16029324 | None:intergenic | 30.0% | |
| AAACATGCAAAAAAAACCAC+TGG | - | chr8.1:16032049-16032068 | None:intergenic | 30.0% | |
| AAATGAATTCAGAAACCAAG+GGG | + | chr8.1:16032609-16032628 | MS.gene044456:CDS | 30.0% | |
| AAATTTGGTCCTATTAAGCA+TGG | + | chr8.1:16030513-16030532 | MS.gene044456:CDS | 30.0% | |
| AACAATTGAACTTCTTGAAG+AGG | + | chr8.1:16030482-16030501 | MS.gene044456:CDS | 30.0% | |
| AACTAGAAGGAAATAACTGT+TGG | + | chr8.1:16029334-16029353 | MS.gene044456:intron | 30.0% | |
| AACTTTATTGGAAAGTAGCT+TGG | + | chr8.1:16031981-16032000 | MS.gene044456:intron | 30.0% | |
| ACATAATATCCTTTGTCTTG+TGG | - | chr8.1:16029533-16029552 | None:intergenic | 30.0% | |
| ACATCCCACAATTATTTAGT+AGG | - | chr8.1:16029187-16029206 | None:intergenic | 30.0% | |
| ACCAGGGTAAATATAGATAA+AGG | - | chr8.1:16029289-16029308 | None:intergenic | 30.0% | |
| ACTCCCTACTAAATAATTGT+GGG | + | chr8.1:16029180-16029199 | MS.gene044456:intron | 30.0% | |
| AGAAATGAATTCAGAAACCA+AGG | + | chr8.1:16032607-16032626 | MS.gene044456:CDS | 30.0% | |
| AGAGAATGCAATAATGTGAA+AGG | + | chr8.1:16031433-16031452 | MS.gene044456:intron | 30.0% | |
| ATGTCTTAAATGACGTCTTT+AGG | + | chr8.1:16029549-16029568 | MS.gene044456:CDS | 30.0% | |
| CAAATAACTAAACTGTCAAC+AGG | - | chr8.1:16032294-16032313 | None:intergenic | 30.0% | |
| CATCCCACAATTATTTAGTA+GGG | - | chr8.1:16029186-16029205 | None:intergenic | 30.0% | |
| GAAATGAATTCAGAAACCAA+GGG | + | chr8.1:16032608-16032627 | MS.gene044456:CDS | 30.0% | |
| GAAGGGGATTAATAATACAA+CGG | + | chr8.1:16031802-16031821 | MS.gene044456:intron | 30.0% | |
| GATAAAGGATACAAAAGATC+AGG | - | chr8.1:16029274-16029293 | None:intergenic | 30.0% | |
| GTAATCGTATTCACAAAATC+CGG | + | chr8.1:16031838-16031857 | MS.gene044456:intron | 30.0% | |
| GTCAATATTGTTTCCTTCAA+AGG | + | chr8.1:16031344-16031363 | MS.gene044456:intron | 30.0% | |
| TAAGAGTTTCACTGATATGA+AGG | + | chr8.1:16030056-16030075 | MS.gene044456:intron | 30.0% | |
| TAATGACAAGAGAAAAAGAC+AGG | - | chr8.1:16031397-16031416 | None:intergenic | 30.0% | |
| TAGATTTGTATCTTCTCACA+TGG | + | chr8.1:16031229-16031248 | MS.gene044456:intron | 30.0% | |
| TCAAATCAGAAACTCGATAT+AGG | - | chr8.1:16032088-16032107 | None:intergenic | 30.0% | |
| TCATTCTCACTTAGATCATT+AGG | - | chr8.1:16029902-16029921 | None:intergenic | 30.0% | |
| TCCTTTATCTATATTTACCC+TGG | + | chr8.1:16029285-16029304 | MS.gene044456:intron | 30.0% | |
| TGTACAATCTTCATAGTTCA+GGG | - | chr8.1:16029387-16029406 | None:intergenic | 30.0% | |
| TTATTATCCTATGGACAACA+AGG | + | chr8.1:16029838-16029857 | MS.gene044456:CDS | 30.0% | |
| TTTCACATTATTGCATTCTC+TGG | - | chr8.1:16031434-16031453 | None:intergenic | 30.0% | |
| ! | ACACAATGTTTTACAATCAG+AGG | - | chr8.1:16030969-16030988 | None:intergenic | 30.0% |
| ! | ATAGGTAGGTATTGTTCTAT+AGG | + | chr8.1:16028881-16028900 | MS.gene044456:intron | 30.0% |
| ! | CAGAACTAGGTTTATCTTTT+AGG | + | chr8.1:16028991-16029010 | MS.gene044456:intron | 30.0% |
| ! | GAAACCTTTCTTTTGGTATA+TGG | - | chr8.1:16031669-16031688 | None:intergenic | 30.0% |
| ! | GTGGGTTAAAAGGTTAATAA+AGG | + | chr8.1:16028818-16028837 | MS.gene044456:intron | 30.0% |
| ! | TCTGTTAGAAACCTTTCTTT+TGG | - | chr8.1:16031676-16031695 | None:intergenic | 30.0% |
| ! | TTCTAAAAGCTTGATATCTC+AGG | + | chr8.1:16029109-16029128 | MS.gene044456:intron | 30.0% |
| !! | AGAAATGTTGGTTTGTAGTA+GGG | + | chr8.1:16028779-16028798 | MS.gene044456:intron | 30.0% |
| !! | ATATCAAGCTTTTAGAAACC+AGG | - | chr8.1:16029106-16029125 | None:intergenic | 30.0% |
| !! | CTCATATATAGTGGGTTAAA+AGG | + | chr8.1:16028808-16028827 | MS.gene044456:intron | 30.0% |
| !! | TAGAAATGTTGGTTTGTAGT+AGG | + | chr8.1:16028778-16028797 | MS.gene044456:intron | 30.0% |
| !! | TAGCCTCTTTTTCATTAATG+GGG | - | chr8.1:16030332-16030351 | None:intergenic | 30.0% |
| !!! | TTTTGGCTTTGTTGAATATG+AGG | + | chr8.1:16030663-16030682 | MS.gene044456:CDS | 30.0% |
| AACTATCACACCTTTCTCAT+AGG | - | chr8.1:16029441-16029460 | None:intergenic | 35.0% | |
| AAGGAAATAACTGTTGGATC+AGG | + | chr8.1:16029340-16029359 | MS.gene044456:intron | 35.0% | |
| AATAAAAACTGCAGATGCTC+AGG | + | chr8.1:16029412-16029431 | MS.gene044456:CDS | 35.0% | |
| AATGTCCCATCATTATGATC+TGG | - | chr8.1:16028915-16028934 | None:intergenic | 35.0% | |
| ACACTAAAGATAGTAACCAG+TGG | + | chr8.1:16032030-16032049 | MS.gene044456:intron | 35.0% | |
| AGAAAGGTTTCTAACAGAAG+TGG | + | chr8.1:16031678-16031697 | MS.gene044456:intron | 35.0% | |
| AGAATAATTTGAATGGCCTG+TGG | - | chr8.1:16032223-16032242 | None:intergenic | 35.0% | |
| AGTTACGGATCTAGAAATGT+TGG | + | chr8.1:16028767-16028786 | MS.gene044456:intron | 35.0% | |
| ATGAAAAGTAACACAGCATC+TGG | + | chr8.1:16030081-16030100 | MS.gene044456:CDS | 35.0% | |
| ATGGAAAAAATTCCCCAAAC+AGG | - | chr8.1:16031650-16031669 | None:intergenic | 35.0% | |
| CACTCCCTACTAAATAATTG+TGG | + | chr8.1:16029179-16029198 | MS.gene044456:intron | 35.0% | |
| CATCAATATACACCTTCTTC+AGG | - | chr8.1:16030246-16030265 | None:intergenic | 35.0% | |
| CTACCCCATTAATGAAAAAG+AGG | + | chr8.1:16030326-16030345 | MS.gene044456:intron | 35.0% | |
| CTGCTAAATCCAATGAACAA+CGG | + | chr8.1:16030142-16030161 | MS.gene044456:CDS | 35.0% | |
| CTGTACAATCTTCATAGTTC+AGG | - | chr8.1:16029388-16029407 | None:intergenic | 35.0% | |
| CTTATTCTAGTAAGCGATAG+CGG | + | chr8.1:16032496-16032515 | MS.gene044456:intron | 35.0% | |
| GAAAATAAACCACAAGTACC+AGG | - | chr8.1:16029306-16029325 | None:intergenic | 35.0% | |
| GAAGAAGCAATTACAGATTG+AGG | - | chr8.1:16029725-16029744 | None:intergenic | 35.0% | |
| GAGGATGAAAACCCTAATAA+TGG | + | chr8.1:16029806-16029825 | MS.gene044456:CDS | 35.0% | |
| GCATTCCAGATCATAATGAT+GGG | + | chr8.1:16028907-16028926 | MS.gene044456:intron | 35.0% | |
| GGTCGATACTCATATATAGT+GGG | + | chr8.1:16028800-16028819 | MS.gene044456:intron | 35.0% | |
| GTGATAATATTGCTCCACAA+AGG | - | chr8.1:16028528-16028547 | None:intergenic | 35.0% | |
| TACAGGTAGTTGAGTCAATT+AGG | + | chr8.1:16031274-16031293 | MS.gene044456:intron | 35.0% | |
| TAGTTACTGGATGCTTAACT+GGG | + | chr8.1:16029462-16029481 | MS.gene044456:CDS | 35.0% | |
| TATAAAACGGCTCTGTTGTT+TGG | + | chr8.1:16029017-16029036 | MS.gene044456:intron | 35.0% | |
| TATATTTACCCTGGTACTTG+TGG | + | chr8.1:16029294-16029313 | MS.gene044456:intron | 35.0% | |
| TATCCTTGTGATGTAGATAC+AGG | + | chr8.1:16031257-16031276 | MS.gene044456:intron | 35.0% | |
| TATTCATTTCTGCCCTGTTT+GGG | + | chr8.1:16031634-16031653 | MS.gene044456:intron | 35.0% | |
| TCTCATAGGACAAGTCAAAA+TGG | + | chr8.1:16032655-16032674 | MS.gene044456:CDS | 35.0% | |
| TCTTCAGAGTGAGTCAAAAT+TGG | - | chr8.1:16030297-16030316 | None:intergenic | 35.0% | |
| TGGAAAAAATTCCCCAAACA+GGG | - | chr8.1:16031649-16031668 | None:intergenic | 35.0% | |
| TGGCAAGTTCCGTATATATA+TGG | - | chr8.1:16030454-16030473 | None:intergenic | 35.0% | |
| TGTCATCAATGAAAATGGTG+AGG | + | chr8.1:16029622-16029641 | MS.gene044456:CDS | 35.0% | |
| TTAGTTACTGGATGCTTAAC+TGG | + | chr8.1:16029461-16029480 | MS.gene044456:CDS | 35.0% | |
| TTCTCACTTAGATCATTAGG+CGG | - | chr8.1:16029899-16029918 | None:intergenic | 35.0% | |
| TTCTGTGCAAAATGCACTTA+AGG | + | chr8.1:16030693-16030712 | MS.gene044456:CDS | 35.0% | |
| TTGTGTCTGAAGAAAGATGT+TGG | + | chr8.1:16031941-16031960 | MS.gene044456:intron | 35.0% | |
| TTTCATCCAACAATCTAGCA+AGG | - | chr8.1:16031067-16031086 | None:intergenic | 35.0% | |
| ! | GAAGGTGTATATTGATGCTT+TGG | + | chr8.1:16030249-16030268 | MS.gene044456:intron | 35.0% |
| ! | GTAGGTATTGTTCTATAGGT+TGG | + | chr8.1:16028885-16028904 | MS.gene044456:intron | 35.0% |
| ! | GTTCTCACAGACATTCTTTT+TGG | + | chr8.1:16029505-16029524 | MS.gene044456:CDS | 35.0% |
| !! | AGGATTGGTTATTGATGAAG+AGG | + | chr8.1:16029865-16029884 | MS.gene044456:CDS | 35.0% |
| !! | CTTTTAGAAACCAGGATGAT+GGG | - | chr8.1:16029098-16029117 | None:intergenic | 35.0% |
| !! | GGAAGTGCTGTATGTATATT+TGG | + | chr8.1:16030751-16030770 | MS.gene044456:intron | 35.0% |
| !! | TGCTTCTTCAATGTTTCTAG+AGG | + | chr8.1:16029736-16029755 | MS.gene044456:intron | 35.0% |
| !! | TTTTAGAAACCAGGATGATG+GGG | - | chr8.1:16029097-16029116 | None:intergenic | 35.0% |
| !!! | ATTTTTGGCTTCTTTCAGCA+TGG | + | chr8.1:16030634-16030653 | MS.gene044456:intron | 35.0% |
| !!! | GGTGTGATAGTTTTAGTTAC+TGG | + | chr8.1:16029449-16029468 | MS.gene044456:CDS | 35.0% |
| !!! | TTTTTGGCTTCTTTCAGCAT+GGG | + | chr8.1:16030635-16030654 | MS.gene044456:intron | 35.0% |
| AAACACATTCTGCTTACCAC+TGG | - | chr8.1:16031923-16031942 | None:intergenic | 40.0% | |
| AAGCCATACTAACCTGATTC+TGG | - | chr8.1:16029659-16029678 | None:intergenic | 40.0% | |
| ACATGCATTAGCAGAGTCTT+AGG | - | chr8.1:16029241-16029260 | None:intergenic | 40.0% | |
| ACTGCTACCATAATACAACC+CGG | - | chr8.1:16031747-16031766 | None:intergenic | 40.0% | |
| AGACCTTACTGCTTCTTACT+TGG | - | chr8.1:16030545-16030564 | None:intergenic | 40.0% | |
| AGGATCTTCCACAAGATGTT+CGG | - | chr8.1:16029774-16029793 | None:intergenic | 40.0% | |
| AGGTTTCTAACAGAAGTGGT+CGG | + | chr8.1:16031682-16031701 | MS.gene044456:intron | 40.0% | |
| AGTCCAAGTAAGAAGCAGTA+AGG | + | chr8.1:16030539-16030558 | MS.gene044456:CDS | 40.0% | |
| ATGAAGATACCTTGCACTCA+AGG | - | chr8.1:16031479-16031498 | None:intergenic | 40.0% | |
| ATGCATTAGCAGAGTCTTAG+GGG | - | chr8.1:16029239-16029258 | None:intergenic | 40.0% | |
| ATGCCAGAATCAGGTTAGTA+TGG | + | chr8.1:16029653-16029672 | MS.gene044456:intron | 40.0% | |
| ATTCATTTCTGCCCTGTTTG+GGG | + | chr8.1:16031635-16031654 | MS.gene044456:intron | 40.0% | |
| ATTGAGGCAGAACTTAACTG+TGG | - | chr8.1:16029596-16029615 | None:intergenic | 40.0% | |
| ATTTGAATGGCCTGTGGTTA+TGG | - | chr8.1:16032217-16032236 | None:intergenic | 40.0% | |
| CATAGGACAAGTCAAAATGG+AGG | + | chr8.1:16032658-16032677 | MS.gene044456:CDS | 40.0% | |
| CATATAGCAACCATAACCAC+AGG | + | chr8.1:16032204-16032223 | MS.gene044456:intron | 40.0% | |
| CATGCATTAGCAGAGTCTTA+GGG | - | chr8.1:16029240-16029259 | None:intergenic | 40.0% | |
| CATTGTGTATGCTTTCGAAC+TGG | + | chr8.1:16030981-16031000 | MS.gene044456:intron | 40.0% | |
| CTACCTGTATCTACATCACA+AGG | - | chr8.1:16031263-16031282 | None:intergenic | 40.0% | |
| CTATTCATTTCTGCCCTGTT+TGG | + | chr8.1:16031633-16031652 | MS.gene044456:intron | 40.0% | |
| GAAAAGATATCGAGTACACG+AGG | + | chr8.1:16032392-16032411 | MS.gene044456:CDS | 40.0% | |
| GCTTGATATCTCAGGCTATT+TGG | + | chr8.1:16029117-16029136 | MS.gene044456:intron | 40.0% | |
| GGCAAGAACTTTACAGAACT+AGG | + | chr8.1:16028978-16028997 | MS.gene044456:intron | 40.0% | |
| GGCATTCCAGATCATAATGA+TGG | + | chr8.1:16028906-16028925 | MS.gene044456:intron | 40.0% | |
| GGGTAGATGGTGTAACATTA+TGG | - | chr8.1:16032714-16032733 | None:intergenic | 40.0% | |
| GGGTCGATACTCATATATAG+TGG | + | chr8.1:16028799-16028818 | MS.gene044456:intron | 40.0% | |
| GTTCTGTAAAGTTCTTGCCT+TGG | - | chr8.1:16028977-16028996 | None:intergenic | 40.0% | |
| GTTGTATTATGGTAGCAGTG+TGG | + | chr8.1:16031748-16031767 | MS.gene044456:intron | 40.0% | |
| TGACGTCTTTAGGTACATTG+AGG | + | chr8.1:16029559-16029578 | MS.gene044456:CDS | 40.0% | |
| TGTAAAGTTCTTGCCTTGGT+GGG | - | chr8.1:16028973-16028992 | None:intergenic | 40.0% | |
| TTGAGGCAGAACTTAACTGT+GGG | - | chr8.1:16029595-16029614 | None:intergenic | 40.0% | |
| TTGAGTAGATCAGACAGCAA+TGG | + | chr8.1:16028602-16028621 | MS.gene044456:CDS | 40.0% | |
| TTTGGTCCTATTAAGCATGG+TGG | + | chr8.1:16030516-16030535 | MS.gene044456:CDS | 40.0% | |
| ! | CGGCTTTTCTGTTCTGTTTT+TGG | + | chr8.1:16031322-16031341 | MS.gene044456:intron | 40.0% |
| ! | CTTGCATTGTGTTACTCTTC+TGG | + | chr8.1:16030015-16030034 | MS.gene044456:intron | 40.0% |
| ! | CTTTTTGCTACAGCTTCTGA+AGG | + | chr8.1:16030423-16030442 | MS.gene044456:intron | 40.0% |
| ! | TTTAGAAACCAGGATGATGG+GGG | - | chr8.1:16029096-16029115 | None:intergenic | 40.0% |
| ! | TTTCAGCATGGGTTCTGTTT+TGG | + | chr8.1:16030646-16030665 | MS.gene044456:intron | 40.0% |
| !! | AGGATAGCTTGTTCCTTTGA+AGG | - | chr8.1:16031360-16031379 | None:intergenic | 40.0% |
| !! | GAGACTTGCTTTAAGTTGCT+CGG | + | chr8.1:16031302-16031321 | MS.gene044456:intron | 40.0% |
| !! | GCTTTTAGAAACCAGGATGA+TGG | - | chr8.1:16029099-16029118 | None:intergenic | 40.0% |
| !!! | TTTTTGGCTCCACAAGACAA+AGG | + | chr8.1:16029521-16029540 | MS.gene044456:CDS | 40.0% |
| AATTGCTTCCTAGGTGCAAC+CGG | - | chr8.1:16031860-16031879 | None:intergenic | 45.0% | |
| ACTAGTGACGTTCCTGAAGA+AGG | + | chr8.1:16030231-16030250 | MS.gene044456:CDS | 45.0% | |
| AGAAACCAAGGGGAATTCTC+GGG | + | chr8.1:16032619-16032638 | MS.gene044456:CDS | 45.0% | |
| AGGACAAGTCAAAATGGAGG+TGG | + | chr8.1:16032661-16032680 | MS.gene044456:CDS | 45.0% | |
| AGTTGTTGGCAATGCCTTTG+TGG | + | chr8.1:16028511-16028530 | MS.gene044456:CDS | 45.0% | |
| ATGTCTTTCGTGCATCATCC+TGG | - | chr8.1:16029958-16029977 | None:intergenic | 45.0% | |
| CAGAAACCAAGGGGAATTCT+CGG | + | chr8.1:16032618-16032637 | MS.gene044456:CDS | 45.0% | |
| CCTATGGACAACAAGGAAGA+AGG | + | chr8.1:16029845-16029864 | MS.gene044456:CDS | 45.0% | |
| CGTTACCTTAGTAATGCCAG+TGG | + | chr8.1:16031904-16031923 | MS.gene044456:intron | 45.0% | |
| CTACCGCAAAATCTACTCCT+GGG | + | chr8.1:16030169-16030188 | MS.gene044456:CDS | 45.0% | |
| CTGTAAAGTTCTTGCCTTGG+TGG | - | chr8.1:16028974-16028993 | None:intergenic | 45.0% | |
| CTTCCACAAGATGTTCGGAA+GGG | - | chr8.1:16029769-16029788 | None:intergenic | 45.0% | |
| CTTGTCCTATGAGAACTCCT+AGG | - | chr8.1:16032649-16032668 | None:intergenic | 45.0% | |
| GAGGACTAGGAGTAGTAGAA+GGG | - | chr8.1:16028490-16028509 | None:intergenic | 45.0% | |
| GAGTGGTGAAAATGCAAAGC+AGG | + | chr8.1:16031713-16031732 | MS.gene044456:intron | 45.0% | |
| GCTTACCACTGGCATTACTA+AGG | - | chr8.1:16031912-16031931 | None:intergenic | 45.0% | |
| GCTTTCAGAAGTTGGAACTC+AGG | - | chr8.1:16030900-16030919 | None:intergenic | 45.0% | |
| GGACAACAAGGAAGAAGGAT+TGG | + | chr8.1:16029850-16029869 | MS.gene044456:CDS | 45.0% | |
| GGACAAGTCAAAATGGAGGT+GGG | + | chr8.1:16032662-16032681 | MS.gene044456:CDS | 45.0% | |
| TACTGGATGCTTAACTGGGA+AGG | + | chr8.1:16029466-16029485 | MS.gene044456:CDS | 45.0% | |
| TCGGTACCTTGCTAGATTGT+TGG | + | chr8.1:16031058-16031077 | MS.gene044456:intron | 45.0% | |
| TCTTCCACAAGATGTTCGGA+AGG | - | chr8.1:16029770-16029789 | None:intergenic | 45.0% | |
| TGAAAATGCAAAGCAGGTGC+TGG | + | chr8.1:16031719-16031738 | MS.gene044456:intron | 45.0% | |
| TGAGAGGCAAGCTGTTATTG+AGG | + | chr8.1:16032370-16032389 | MS.gene044456:CDS | 45.0% | |
| TGAGGACTAGGAGTAGTAGA+AGG | - | chr8.1:16028491-16028510 | None:intergenic | 45.0% | |
| TGGAACTCAGGAACTACAGA+GGG | - | chr8.1:16030888-16030907 | None:intergenic | 45.0% | |
| TGGACTCCACCATGCTTAAT+AGG | - | chr8.1:16030525-16030544 | None:intergenic | 45.0% | |
| TTGCCAACAACTTGAGGACT+AGG | - | chr8.1:16028503-16028522 | None:intergenic | 45.0% | |
| TTGGAACTCAGGAACTACAG+AGG | - | chr8.1:16030889-16030908 | None:intergenic | 45.0% | |
| ! | AAACGGCTCTGTTGTTTGGT+TGG | + | chr8.1:16029021-16029040 | MS.gene044456:intron | 45.0% |
| ! | ACTCCTAGTCCTCAAGTTGT+TGG | + | chr8.1:16028497-16028516 | MS.gene044456:CDS | 45.0% |
| ! | ACTTCTGAAAGCAGCAGTTC+TGG | + | chr8.1:16030908-16030927 | MS.gene044456:intron | 45.0% |
| ! | CCTTCTTCCTTGTTGTCCAT+AGG | - | chr8.1:16029848-16029867 | None:intergenic | 45.0% |
| ! | CTCTGTTGTTTGGTTGGAGT+AGG | + | chr8.1:16029027-16029046 | MS.gene044456:intron | 45.0% |
| ! | CTTCTGAAAGCAGCAGTTCT+GGG | + | chr8.1:16030909-16030928 | MS.gene044456:intron | 45.0% |
| !! | AAGGCATTGCCAACAACTTG+AGG | - | chr8.1:16028509-16028528 | None:intergenic | 45.0% |
| !! | ATCCACATGGTGGACAATCA+CGG | - | chr8.1:16028938-16028957 | None:intergenic | 45.0% |
| !! | GAACTGCTGCTTTCAGAAGT+TGG | - | chr8.1:16030908-16030927 | None:intergenic | 45.0% |
| !! | GACAGGAGAGTATTCAGTTG+AGG | - | chr8.1:16031380-16031399 | None:intergenic | 45.0% |
| !! | TAGTAAGCGATAGCGGAAGA+GGG | + | chr8.1:16032503-16032522 | MS.gene044456:intron | 45.0% |
| !! | TGAAAGGAGAGTGCTCCTTT+GGG | + | chr8.1:16031449-16031468 | MS.gene044456:intron | 45.0% |
| AAAATCTACTCCTGGGCCTG+AGG | + | chr8.1:16030176-16030195 | MS.gene044456:CDS | 50.0% | |
| AGATCCAACTTCTGCAGTCC+AGG | + | chr8.1:16029937-16029956 | MS.gene044456:CDS | 50.0% | |
| CACAAAATCCGGTTGCACCT+AGG | + | chr8.1:16031849-16031868 | MS.gene044456:intron | 50.0% | |
| CAGGCTTCACCTATCACTGT+TGG | + | chr8.1:16032347-16032366 | MS.gene044456:intron | 50.0% | |
| CATTATGGTTCCCCACACCA+TGG | - | chr8.1:16032699-16032718 | None:intergenic | 50.0% | |
| CTAGTAGTGACAGTGCACCA+AGG | + | chr8.1:16030208-16030227 | MS.gene044456:CDS | 50.0% | |
| CTGGGAAGGATAACGTGAGA+AGG | + | chr8.1:16029480-16029499 | MS.gene044456:CDS | 50.0% | |
| GACGACCTAGGAGTTCTCAT+AGG | + | chr8.1:16032641-16032660 | MS.gene044456:CDS | 50.0% | |
| GATTGTTTCCCCCATCATCC+TGG | + | chr8.1:16029085-16029104 | MS.gene044456:intron | 50.0% | |
| GCTACCGCAAAATCTACTCC+TGG | + | chr8.1:16030168-16030187 | MS.gene044456:CDS | 50.0% | |
| GCTCAGGAGTCCTATGAGAA+AGG | + | chr8.1:16029428-16029447 | MS.gene044456:CDS | 50.0% | |
| GGTAGCATGCCGTTGTTCAT+TGG | - | chr8.1:16030154-16030173 | None:intergenic | 50.0% | |
| TAGAACCTGTGCACCAAGTC+AGG | - | chr8.1:16028566-16028585 | None:intergenic | 50.0% | |
| TCAGGAACGTCACTAGTCCT+TGG | - | chr8.1:16030228-16030247 | None:intergenic | 50.0% | |
| TCATCCTGGACTGCAGAAGT+TGG | - | chr8.1:16029944-16029963 | None:intergenic | 50.0% | |
| TCTGCATCAATCGCCTGACT+TGG | + | chr8.1:16028550-16028569 | MS.gene044456:CDS | 50.0% | |
| TCTTGCCTTGGTGGGATCTA+GGG | - | chr8.1:16028965-16028984 | None:intergenic | 50.0% | |
| TGCCTCTCACCAACAGTGAT+AGG | - | chr8.1:16032359-16032378 | None:intergenic | 50.0% | |
| TTCCGTGATTGTCCACCATG+TGG | + | chr8.1:16028933-16028952 | MS.gene044456:intron | 50.0% | |
| TTCTTGCCTTGGTGGGATCT+AGG | - | chr8.1:16028966-16028985 | None:intergenic | 50.0% | |
| ! | AGGCCCAGGAGTAGATTTTG+CGG | - | chr8.1:16030175-16030194 | None:intergenic | 50.0% |
| ! | AGGGTTTTCATCCTCTGCAG+AGG | - | chr8.1:16029801-16029820 | None:intergenic | 50.0% |
| ! | CACCTATCACTGTTGGTGAG+AGG | + | chr8.1:16032354-16032373 | MS.gene044456:CDS | 50.0% |
| ! | CTTGGTGCACAGGTTCTATC+AGG | + | chr8.1:16028568-16028587 | MS.gene044456:CDS | 50.0% |
| ! | CTTGGTGCACTGTCACTACT+AGG | - | chr8.1:16030210-16030229 | None:intergenic | 50.0% |
| !! | CTAGTAAGCGATAGCGGAAG+AGG | + | chr8.1:16032502-16032521 | MS.gene044456:intron | 50.0% |
| !! | GAAAGGAGAGTGCTCCTTTG+GGG | + | chr8.1:16031450-16031469 | MS.gene044456:intron | 50.0% |
| !! | GTGAAAGGAGAGTGCTCCTT+TGG | + | chr8.1:16031448-16031467 | MS.gene044456:intron | 50.0% |
| !!! | TTTGGTGGTGGACGAGGTTT+TGG | + | chr8.1:16032583-16032602 | MS.gene044456:CDS | 50.0% |
| AGATCCTGCAACCTCTGCAG+AGG | + | chr8.1:16029787-16029806 | MS.gene044456:CDS | 55.0% | |
| AGTCAAAATGGAGGTGGGCG+TGG | + | chr8.1:16032667-16032686 | MS.gene044456:CDS | 55.0% | |
| AGTGGTCGGAGTCTAGTGAG+TGG | + | chr8.1:16031696-16031715 | MS.gene044456:intron | 55.0% | |
| CTACTAGGCGCTAATGCCTC+AGG | - | chr8.1:16030195-16030214 | None:intergenic | 55.0% | |
| CTTGCCTTGGTGGGATCTAG+GGG | - | chr8.1:16028964-16028983 | None:intergenic | 55.0% | |
| GCACCCTTCCGAACATCTTG+TGG | + | chr8.1:16029763-16029782 | MS.gene044456:CDS | 55.0% | |
| GCTGTGCACATGCCAGAATC+AGG | + | chr8.1:16029644-16029663 | MS.gene044456:CDS | 55.0% | |
| TCATCCTCTGCAGAGGTTGC+AGG | - | chr8.1:16029794-16029813 | None:intergenic | 55.0% | |
| TGCACTCAAGGCTACCCCAA+AGG | - | chr8.1:16031467-16031486 | None:intergenic | 55.0% | |
| ! | GCTGGTGCCGGGTTGTATTA+TGG | + | chr8.1:16031737-16031756 | MS.gene044456:intron | 55.0% |
| ! | TTGGGGTAGCCTTGAGTGCA+AGG | + | chr8.1:16031467-16031486 | MS.gene044456:intron | 55.0% |
| !! | AATCGCCTGACTTGGTGCAC+AGG | + | chr8.1:16028558-16028577 | MS.gene044456:CDS | 55.0% |
| !! | TAAGCGATAGCGGAAGAGGG+AGG | + | chr8.1:16032506-16032525 | MS.gene044456:CDS | 55.0% |
| AAGAGGTGGTTTCCGAGGCG+AGG | + | chr8.1:16032540-16032559 | MS.gene044456:CDS | 60.0% | |
| AGAGGTGGTTTCCGAGGCGA+GGG | + | chr8.1:16032541-16032560 | MS.gene044456:CDS | 60.0% | |
| AGGCATCCTTCGGGAAGAGG+TGG | + | chr8.1:16032526-16032545 | MS.gene044456:CDS | 60.0% | |
| CAAAATGGAGGTGGGCGTGG+TGG | + | chr8.1:16032670-16032689 | MS.gene044456:CDS | 60.0% | |
| CAGACGCCACTCTTGCAGCT+CGG | - | chr8.1:16030125-16030144 | None:intergenic | 60.0% | |
| CGGAAACCACCTCTTCCCGA+AGG | - | chr8.1:16032535-16032554 | None:intergenic | 60.0% | |
| GATCTAGGGGCGGATCCACA+TGG | - | chr8.1:16028951-16028970 | None:intergenic | 60.0% | |
| GGGAATTCTCGGGACGACCT+AGG | + | chr8.1:16032629-16032648 | MS.gene044456:CDS | 60.0% | |
| GTCGTCCCGAGAATTCCCCT+TGG | - | chr8.1:16032627-16032646 | None:intergenic | 60.0% | |
| GTTTCCGAGGCGAGGGTTTC+CGG | + | chr8.1:16032548-16032567 | MS.gene044456:CDS | 60.0% | |
| TCGGGAAGAGGTGGTTTCCG+AGG | + | chr8.1:16032535-16032554 | MS.gene044456:CDS | 60.0% | |
| TTTCCGAGGCGAGGGTTTCC+GGG | + | chr8.1:16032549-16032568 | MS.gene044456:CDS | 60.0% | |
| !! | CGGAAGAGGGAGGCATCCTT+CGG | + | chr8.1:16032516-16032535 | MS.gene044456:CDS | 60.0% |
| !! | GGAAGAGGGAGGCATCCTTC+GGG | + | chr8.1:16032517-16032536 | MS.gene044456:CDS | 60.0% |
| !! | GGGAGATTTGGTGGTGGACG+AGG | + | chr8.1:16032577-16032596 | MS.gene044456:CDS | 60.0% |
| !! | TGCAAAGCAGGTGCTGGTGC+CGG | + | chr8.1:16031725-16031744 | MS.gene044456:intron | 60.0% |
| CACCAAATCTCCCACGCCCC+CGG | - | chr8.1:16032570-16032589 | None:intergenic | 65.0% | |
| CTAGGGGCGGATCCACATGG+TGG | - | chr8.1:16028948-16028967 | None:intergenic | 65.0% | |
| GCCACTCTTGCAGCTCGGCT+GGG | - | chr8.1:16030120-16030139 | None:intergenic | 65.0% | |
| GCCTTGGTGGGATCTAGGGG+CGG | - | chr8.1:16028961-16028980 | None:intergenic | 65.0% | |
| TCCCAGCCGAGCTGCAAGAG+TGG | + | chr8.1:16030116-16030135 | MS.gene044456:CDS | 65.0% | |
| TCCGCCCCTAGATCCCACCA+AGG | + | chr8.1:16028957-16028976 | MS.gene044456:intron | 65.0% | |
| TTCCGAGGCGAGGGTTTCCG+GGG | + | chr8.1:16032550-16032569 | MS.gene044456:CDS | 65.0% | |
| ! | TTCCGGGGGCGTGGGAGATT+TGG | + | chr8.1:16032565-16032584 | MS.gene044456:CDS | 65.0% |
| !! | CGTGGTGGACGCCATGGTGT+GGG | + | chr8.1:16032685-16032704 | MS.gene044456:CDS | 65.0% |
| !! | GCAAAGCAGGTGCTGGTGCC+GGG | + | chr8.1:16031726-16031745 | MS.gene044456:intron | 65.0% |
| !! | GGGAGGCATCCTTCGGGAAG+AGG | + | chr8.1:16032523-16032542 | MS.gene044456:CDS | 65.0% |
| !! | GGGCGTGGGAGATTTGGTGG+TGG | + | chr8.1:16032571-16032590 | MS.gene044456:CDS | 65.0% |
| !! | GTGGTGGACGCCATGGTGTG+GGG | + | chr8.1:16032686-16032705 | MS.gene044456:CDS | 65.0% |
| CGCCACTCTTGCAGCTCGGC+TGG | - | chr8.1:16030121-16030140 | None:intergenic | 70.0% | |
| GGCGCTAATGCCTCAGGCCC+AGG | - | chr8.1:16030189-16030208 | None:intergenic | 70.0% | |
| TCCGAGGCGAGGGTTTCCGG+GGG | + | chr8.1:16032551-16032570 | MS.gene044456:CDS | 70.0% | |
| ! | CGGGGGCGTGGGAGATTTGG+TGG | + | chr8.1:16032568-16032587 | MS.gene044456:CDS | 70.0% |
| !! | GCGTGGTGGACGCCATGGTG+TGG | + | chr8.1:16032684-16032703 | MS.gene044456:CDS | 70.0% |
| GCCCCCGGAAACCCTCGCCT+CGG | - | chr8.1:16032555-16032574 | None:intergenic | 75.0% | |
| ! | GCGAGGGTTTCCGGGGGCGT+GGG | + | chr8.1:16032557-16032576 | MS.gene044456:CDS | 75.0% |
| !! | GGTGGGCGTGGTGGACGCCA+TGG | + | chr8.1:16032679-16032698 | MS.gene044456:CDS | 75.0% |
| ! | GGCGAGGGTTTCCGGGGGCG+TGG | + | chr8.1:16032556-16032575 | MS.gene044456:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 16028467 | 16032741 | 16028467 | ID=MS.gene044456 |
| chr8.1 | mRNA | 16028467 | 16032741 | 16028467 | ID=MS.gene044456.t1;Parent=MS.gene044456 |
| chr8.1 | exon | 16028467 | 16028652 | 16028467 | ID=MS.gene044456.t1.exon1;Parent=MS.gene044456.t1 |
| chr8.1 | CDS | 16028467 | 16028652 | 16028467 | ID=cds.MS.gene044456.t1;Parent=MS.gene044456.t1 |
| chr8.1 | exon | 16029362 | 16029665 | 16029362 | ID=MS.gene044456.t1.exon2;Parent=MS.gene044456.t1 |
| chr8.1 | CDS | 16029362 | 16029665 | 16029362 | ID=cds.MS.gene044456.t1;Parent=MS.gene044456.t1 |
| chr8.1 | exon | 16029756 | 16029991 | 16029756 | ID=MS.gene044456.t1.exon3;Parent=MS.gene044456.t1 |
| chr8.1 | CDS | 16029756 | 16029991 | 16029756 | ID=cds.MS.gene044456.t1;Parent=MS.gene044456.t1 |
| chr8.1 | exon | 16030078 | 16030252 | 16030078 | ID=MS.gene044456.t1.exon4;Parent=MS.gene044456.t1 |
| chr8.1 | CDS | 16030078 | 16030252 | 16030078 | ID=cds.MS.gene044456.t1;Parent=MS.gene044456.t1 |
| chr8.1 | exon | 16030436 | 16030560 | 16030436 | ID=MS.gene044456.t1.exon5;Parent=MS.gene044456.t1 |
| chr8.1 | CDS | 16030436 | 16030560 | 16030436 | ID=cds.MS.gene044456.t1;Parent=MS.gene044456.t1 |
| chr8.1 | exon | 16030652 | 16030714 | 16030652 | ID=MS.gene044456.t1.exon6;Parent=MS.gene044456.t1 |
| chr8.1 | CDS | 16030652 | 16030714 | 16030652 | ID=cds.MS.gene044456.t1;Parent=MS.gene044456.t1 |
| chr8.1 | exon | 16032350 | 16032413 | 16032350 | ID=MS.gene044456.t1.exon7;Parent=MS.gene044456.t1 |
| chr8.1 | CDS | 16032350 | 16032413 | 16032350 | ID=cds.MS.gene044456.t1;Parent=MS.gene044456.t1 |
| chr8.1 | exon | 16032506 | 16032741 | 16032506 | ID=MS.gene044456.t1.exon8;Parent=MS.gene044456.t1 |
| chr8.1 | CDS | 16032506 | 16032741 | 16032506 | ID=cds.MS.gene044456.t1;Parent=MS.gene044456.t1 |
| Gene Sequence |
| Protein sequence |
