Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023268.t1 | RHN42333.1 | 98.2 | 282 | 5 | 0 | 1 | 282 | 7 | 288 | 6.60E-163 | 583.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023268.t1 | Q9SIS4 | 63.9 | 294 | 94 | 5 | 1 | 282 | 1 | 294 | 4.1e-105 | 382.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023268.t1 | A0A396GP95 | 98.2 | 282 | 5 | 0 | 1 | 282 | 7 | 288 | 4.8e-163 | 583.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene018546 | MS.gene023268 | PPI |
| MS.gene023268 | MS.gene64505 | PPI |
| MS.gene09836 | MS.gene023268 | PPI |
| MS.gene061907 | MS.gene023268 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023268.t1 | MTR_1g038810 | 68.590 | 312 | 67 | 4 | 1 | 282 | 9 | 319 | 2.59e-146 | 418 |
| MS.gene023268.t1 | MTR_1g038810 | 67.308 | 312 | 67 | 5 | 1 | 282 | 9 | 315 | 7.70e-141 | 404 |
| MS.gene023268.t1 | MTR_6g072010 | 54.032 | 248 | 94 | 1 | 55 | 282 | 47 | 294 | 1.06e-94 | 285 |
| MS.gene023268.t1 | MTR_6g072010 | 54.032 | 248 | 94 | 1 | 55 | 282 | 58 | 305 | 2.63e-94 | 284 |
| MS.gene023268.t1 | MTR_7g100070 | 39.935 | 308 | 148 | 8 | 2 | 282 | 11 | 308 | 2.93e-63 | 206 |
| MS.gene023268.t1 | MTR_7g100070 | 40.065 | 307 | 148 | 8 | 2 | 282 | 11 | 307 | 4.20e-63 | 205 |
| MS.gene023268.t1 | MTR_7g100070 | 39.935 | 308 | 148 | 7 | 2 | 282 | 51 | 348 | 8.68e-63 | 206 |
| MS.gene023268.t1 | MTR_6g009260 | 43.191 | 257 | 119 | 5 | 52 | 282 | 54 | 309 | 2.52e-61 | 201 |
| MS.gene023268.t1 | MTR_8g091360 | 55.705 | 149 | 63 | 1 | 137 | 282 | 312 | 460 | 6.51e-52 | 177 |
| MS.gene023268.t1 | MTR_8g091360 | 51.852 | 81 | 37 | 2 | 45 | 124 | 131 | 210 | 4.19e-18 | 84.3 |
| MS.gene023268.t1 | MTR_8g091360 | 55.705 | 149 | 63 | 1 | 137 | 282 | 312 | 460 | 3.50e-51 | 177 |
| MS.gene023268.t1 | MTR_8g091360 | 51.852 | 81 | 37 | 2 | 45 | 124 | 131 | 210 | 4.10e-18 | 84.3 |
| MS.gene023268.t1 | MTR_1g097690 | 53.061 | 147 | 69 | 0 | 136 | 282 | 347 | 493 | 3.30e-48 | 167 |
| MS.gene023268.t1 | MTR_1g097690 | 42.529 | 87 | 49 | 1 | 39 | 125 | 87 | 172 | 3.16e-14 | 72.8 |
| MS.gene023268.t1 | MTR_1g097690 | 53.020 | 149 | 70 | 0 | 136 | 284 | 347 | 495 | 1.06e-47 | 168 |
| MS.gene023268.t1 | MTR_1g097690 | 42.529 | 87 | 49 | 1 | 39 | 125 | 87 | 172 | 3.54e-14 | 72.8 |
| MS.gene023268.t1 | MTR_5g006820 | 52.740 | 146 | 66 | 1 | 140 | 282 | 354 | 499 | 1.21e-46 | 165 |
| MS.gene023268.t1 | MTR_5g006820 | 51.852 | 81 | 36 | 2 | 46 | 124 | 84 | 163 | 7.64e-19 | 86.7 |
| MS.gene023268.t1 | MTR_1g103330 | 50.000 | 154 | 74 | 1 | 132 | 282 | 307 | 460 | 5.36e-46 | 163 |
| MS.gene023268.t1 | MTR_1g103330 | 53.086 | 81 | 35 | 2 | 46 | 124 | 82 | 161 | 2.03e-19 | 88.2 |
| MS.gene023268.t1 | MTR_6g042240 | 55.714 | 140 | 62 | 0 | 143 | 282 | 332 | 471 | 8.06e-46 | 162 |
| MS.gene023268.t1 | MTR_6g042240 | 52.113 | 71 | 33 | 1 | 55 | 125 | 59 | 128 | 2.53e-16 | 79.3 |
| MS.gene023268.t1 | MTR_6g042240 | 55.714 | 140 | 62 | 0 | 143 | 282 | 372 | 511 | 8.73e-46 | 163 |
| MS.gene023268.t1 | MTR_6g042240 | 52.113 | 71 | 33 | 1 | 55 | 125 | 99 | 168 | 3.24e-16 | 79.0 |
| MS.gene023268.t1 | MTR_8g043480 | 50.000 | 146 | 70 | 1 | 140 | 282 | 45 | 190 | 9.09e-46 | 156 |
| MS.gene023268.t1 | MTR_1g071680 | 53.642 | 151 | 66 | 2 | 136 | 282 | 283 | 433 | 1.07e-45 | 162 |
| MS.gene023268.t1 | MTR_1g071680 | 48.864 | 88 | 40 | 2 | 37 | 124 | 79 | 161 | 4.20e-18 | 84.3 |
| MS.gene023268.t1 | MTR_6g042240 | 55.714 | 140 | 62 | 0 | 143 | 282 | 385 | 524 | 1.54e-45 | 162 |
| MS.gene023268.t1 | MTR_6g042240 | 52.113 | 71 | 33 | 1 | 55 | 125 | 112 | 181 | 3.42e-16 | 79.0 |
| MS.gene023268.t1 | MTR_8g043480 | 50.000 | 146 | 70 | 1 | 140 | 282 | 175 | 320 | 1.82e-44 | 156 |
| MS.gene023268.t1 | MTR_8g043480 | 47.945 | 73 | 37 | 1 | 52 | 124 | 8 | 79 | 8.02e-16 | 77.4 |
| MS.gene023268.t1 | MTR_8g043480 | 50.000 | 146 | 70 | 1 | 140 | 282 | 240 | 385 | 4.93e-44 | 156 |
| MS.gene023268.t1 | MTR_8g043480 | 47.945 | 73 | 37 | 1 | 52 | 124 | 73 | 144 | 9.08e-16 | 77.4 |
| MS.gene023268.t1 | MTR_7g095260 | 52.448 | 143 | 65 | 1 | 143 | 282 | 239 | 381 | 2.08e-43 | 154 |
| MS.gene023268.t1 | MTR_7g095260 | 54.930 | 71 | 31 | 1 | 54 | 124 | 40 | 109 | 3.84e-17 | 81.6 |
| MS.gene023268.t1 | MTR_7g095260 | 52.448 | 143 | 65 | 1 | 143 | 282 | 291 | 433 | 2.12e-43 | 155 |
| MS.gene023268.t1 | MTR_7g095260 | 54.930 | 71 | 31 | 1 | 54 | 124 | 92 | 161 | 4.27e-17 | 81.3 |
| MS.gene023268.t1 | MTR_4g098850 | 41.837 | 196 | 101 | 2 | 93 | 282 | 544 | 732 | 4.82e-41 | 151 |
| MS.gene023268.t1 | MTR_4g098850 | 47.475 | 99 | 52 | 0 | 184 | 282 | 2 | 100 | 2.38e-21 | 94.4 |
| MS.gene023268.t1 | MTR_4g098850 | 38.824 | 85 | 52 | 0 | 41 | 125 | 340 | 424 | 1.55e-14 | 73.9 |
| MS.gene023268.t1 | MTR_5g014090 | 49.286 | 140 | 71 | 0 | 143 | 282 | 370 | 509 | 2.20e-37 | 139 |
| MS.gene023268.t1 | MTR_5g014090 | 44.330 | 97 | 49 | 2 | 41 | 133 | 93 | 188 | 1.95e-18 | 85.5 |
| MS.gene023268.t1 | MTR_5g014090 | 49.286 | 140 | 71 | 0 | 143 | 282 | 370 | 509 | 5.56e-37 | 139 |
| MS.gene023268.t1 | MTR_5g014090 | 44.330 | 97 | 49 | 2 | 41 | 133 | 93 | 188 | 2.43e-18 | 85.1 |
| MS.gene023268.t1 | MTR_1g078100 | 25.670 | 261 | 143 | 8 | 55 | 282 | 528 | 770 | 1.61e-18 | 85.9 |
| MS.gene023268.t1 | MTR_1g078100 | 25.670 | 261 | 143 | 8 | 55 | 282 | 248 | 490 | 2.02e-18 | 85.5 |
| MS.gene023268.t1 | MTR_1g078100 | 25.670 | 261 | 143 | 8 | 55 | 282 | 259 | 501 | 2.30e-18 | 85.5 |
| MS.gene023268.t1 | MTR_6g092670 | 24.151 | 265 | 155 | 6 | 51 | 282 | 559 | 810 | 6.62e-17 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023268.t1 | AT2G01900 | 63.946 | 294 | 94 | 5 | 1 | 282 | 1 | 294 | 2.30e-131 | 379 |
| MS.gene023268.t1 | AT2G01900 | 63.946 | 294 | 94 | 5 | 1 | 282 | 9 | 302 | 3.45e-131 | 379 |
| MS.gene023268.t1 | AT2G01900 | 63.946 | 294 | 94 | 5 | 1 | 282 | 1 | 294 | 4.15e-131 | 378 |
| MS.gene023268.t1 | AT2G37440 | 44.954 | 327 | 132 | 10 | 2 | 282 | 11 | 335 | 4.15e-73 | 232 |
| MS.gene023268.t1 | AT2G37440 | 44.954 | 327 | 132 | 10 | 2 | 282 | 11 | 335 | 4.15e-73 | 232 |
| MS.gene023268.t1 | AT2G37440 | 47.674 | 258 | 100 | 5 | 56 | 282 | 1 | 254 | 2.75e-66 | 212 |
| MS.gene023268.t1 | AT5G65090 | 56.164 | 146 | 61 | 1 | 140 | 282 | 199 | 344 | 3.16e-50 | 172 |
| MS.gene023268.t1 | AT5G65090 | 45.783 | 83 | 44 | 1 | 55 | 137 | 11 | 92 | 2.48e-18 | 84.7 |
| MS.gene023268.t1 | AT5G65090 | 56.164 | 146 | 61 | 1 | 140 | 282 | 262 | 407 | 6.87e-50 | 172 |
| MS.gene023268.t1 | AT5G65090 | 45.783 | 83 | 44 | 1 | 55 | 137 | 74 | 155 | 3.74e-18 | 84.7 |
| MS.gene023268.t1 | AT5G65090 | 56.164 | 146 | 61 | 1 | 140 | 282 | 262 | 407 | 6.87e-50 | 172 |
| MS.gene023268.t1 | AT5G65090 | 45.783 | 83 | 44 | 1 | 55 | 137 | 74 | 155 | 3.74e-18 | 84.7 |
| MS.gene023268.t1 | AT1G05470 | 54.483 | 145 | 62 | 2 | 142 | 282 | 350 | 494 | 1.12e-46 | 165 |
| MS.gene023268.t1 | AT1G05470 | 57.333 | 75 | 31 | 1 | 50 | 124 | 88 | 161 | 4.93e-20 | 90.1 |
| MS.gene023268.t1 | AT1G05470 | 54.483 | 145 | 62 | 2 | 142 | 282 | 350 | 494 | 1.12e-46 | 165 |
| MS.gene023268.t1 | AT1G05470 | 57.333 | 75 | 31 | 1 | 50 | 124 | 88 | 161 | 4.93e-20 | 90.1 |
| MS.gene023268.t1 | AT2G32010 | 54.545 | 143 | 62 | 1 | 143 | 282 | 329 | 471 | 2.64e-46 | 164 |
| MS.gene023268.t1 | AT2G32010 | 57.333 | 75 | 31 | 1 | 50 | 124 | 87 | 160 | 3.34e-20 | 90.9 |
| MS.gene023268.t1 | AT2G32010 | 54.545 | 143 | 62 | 1 | 143 | 282 | 329 | 471 | 2.64e-46 | 164 |
| MS.gene023268.t1 | AT2G32010 | 57.333 | 75 | 31 | 1 | 50 | 124 | 87 | 160 | 3.34e-20 | 90.9 |
| MS.gene023268.t1 | AT2G32010 | 54.545 | 143 | 62 | 1 | 143 | 282 | 329 | 471 | 2.64e-46 | 164 |
| MS.gene023268.t1 | AT2G32010 | 57.333 | 75 | 31 | 1 | 50 | 124 | 87 | 160 | 3.34e-20 | 90.9 |
| MS.gene023268.t1 | AT2G32010 | 54.545 | 143 | 62 | 1 | 143 | 282 | 329 | 471 | 2.64e-46 | 164 |
| MS.gene023268.t1 | AT2G32010 | 57.333 | 75 | 31 | 1 | 50 | 124 | 87 | 160 | 3.34e-20 | 90.9 |
| MS.gene023268.t1 | AT3G63240 | 51.553 | 161 | 70 | 3 | 126 | 282 | 267 | 423 | 1.70e-45 | 161 |
| MS.gene023268.t1 | AT3G63240 | 55.714 | 70 | 30 | 1 | 55 | 124 | 89 | 157 | 3.35e-17 | 81.6 |
| MS.gene023268.t1 | AT3G63240 | 51.553 | 161 | 70 | 3 | 126 | 282 | 267 | 423 | 1.70e-45 | 161 |
| MS.gene023268.t1 | AT3G63240 | 55.714 | 70 | 30 | 1 | 55 | 124 | 89 | 157 | 3.35e-17 | 81.6 |
| MS.gene023268.t1 | AT5G04980 | 51.370 | 146 | 68 | 1 | 140 | 282 | 157 | 302 | 1.10e-44 | 156 |
| MS.gene023268.t1 | AT5G04980 | 51.370 | 146 | 68 | 1 | 140 | 282 | 192 | 337 | 1.95e-44 | 156 |
| MS.gene023268.t1 | AT5G04980 | 52.308 | 65 | 30 | 1 | 55 | 119 | 10 | 73 | 8.02e-14 | 71.6 |
| MS.gene023268.t1 | AT5G04980 | 51.370 | 146 | 68 | 1 | 140 | 282 | 192 | 337 | 1.95e-44 | 156 |
| MS.gene023268.t1 | AT5G04980 | 52.308 | 65 | 30 | 1 | 55 | 119 | 10 | 73 | 8.02e-14 | 71.6 |
| MS.gene023268.t1 | AT5G04980 | 51.370 | 146 | 68 | 1 | 140 | 282 | 221 | 366 | 2.42e-44 | 156 |
| MS.gene023268.t1 | AT5G04980 | 52.308 | 65 | 30 | 1 | 55 | 119 | 39 | 102 | 9.56e-14 | 71.2 |
| MS.gene023268.t1 | AT1G34120 | 50.704 | 142 | 68 | 1 | 143 | 282 | 185 | 326 | 5.48e-42 | 149 |
| MS.gene023268.t1 | AT1G34120 | 50.704 | 142 | 68 | 1 | 143 | 282 | 340 | 481 | 6.35e-41 | 149 |
| MS.gene023268.t1 | AT1G34120 | 40.000 | 100 | 59 | 1 | 39 | 138 | 90 | 188 | 3.58e-15 | 75.9 |
| MS.gene023268.t1 | AT1G34120 | 50.704 | 142 | 68 | 1 | 143 | 282 | 336 | 477 | 6.62e-41 | 149 |
| MS.gene023268.t1 | AT1G34120 | 40.000 | 100 | 59 | 1 | 39 | 138 | 86 | 184 | 3.50e-15 | 75.9 |
| MS.gene023268.t1 | AT1G34120 | 50.360 | 139 | 67 | 1 | 143 | 279 | 336 | 474 | 7.29e-40 | 145 |
| MS.gene023268.t1 | AT1G34120 | 40.000 | 100 | 59 | 1 | 39 | 138 | 86 | 184 | 3.56e-15 | 75.5 |
| MS.gene023268.t1 | AT1G34120 | 50.704 | 142 | 67 | 2 | 143 | 282 | 340 | 480 | 3.17e-39 | 144 |
| MS.gene023268.t1 | AT1G34120 | 40.000 | 100 | 59 | 1 | 39 | 138 | 90 | 188 | 3.47e-15 | 75.9 |
| MS.gene023268.t1 | AT1G71710 | 47.143 | 140 | 74 | 0 | 143 | 282 | 402 | 541 | 3.74e-38 | 142 |
| MS.gene023268.t1 | AT1G71710 | 47.126 | 87 | 45 | 1 | 39 | 125 | 104 | 189 | 6.01e-19 | 87.0 |
| MS.gene023268.t1 | AT1G71710 | 47.143 | 140 | 74 | 0 | 143 | 282 | 411 | 550 | 4.22e-38 | 142 |
| MS.gene023268.t1 | AT1G71710 | 47.126 | 87 | 45 | 1 | 39 | 125 | 113 | 198 | 5.77e-19 | 87.0 |
| MS.gene023268.t1 | AT4G18010 | 48.571 | 140 | 72 | 0 | 143 | 282 | 392 | 531 | 5.02e-38 | 141 |
| MS.gene023268.t1 | AT4G18010 | 43.158 | 95 | 53 | 1 | 41 | 135 | 98 | 191 | 7.40e-18 | 84.0 |
| MS.gene023268.t1 | AT4G18010 | 48.571 | 140 | 72 | 0 | 143 | 282 | 392 | 531 | 9.36e-38 | 141 |
| MS.gene023268.t1 | AT4G18010 | 43.158 | 95 | 53 | 1 | 41 | 135 | 98 | 191 | 7.44e-18 | 84.0 |
| MS.gene023268.t1 | AT1G65580 | 26.336 | 262 | 145 | 8 | 55 | 282 | 273 | 520 | 2.05e-21 | 94.4 |
| MS.gene023268.t1 | AT1G65580 | 26.718 | 262 | 144 | 8 | 55 | 282 | 539 | 786 | 2.18e-21 | 94.4 |
| MS.gene023268.t1 | AT1G05630 | 26.336 | 262 | 145 | 7 | 55 | 282 | 572 | 819 | 3.44e-21 | 94.0 |
| MS.gene023268.t1 | AT1G05630 | 26.336 | 262 | 145 | 7 | 55 | 282 | 572 | 819 | 4.09e-21 | 93.6 |
| MS.gene023268.t1 | AT2G43900 | 24.335 | 263 | 150 | 6 | 55 | 282 | 577 | 825 | 4.12e-19 | 87.8 |
| MS.gene023268.t1 | AT2G43900 | 24.335 | 263 | 150 | 6 | 55 | 282 | 577 | 825 | 4.77e-19 | 87.8 |
| MS.gene023268.t1 | AT2G31830 | 25.954 | 262 | 146 | 7 | 55 | 282 | 581 | 828 | 3.29e-18 | 85.1 |
| MS.gene023268.t1 | AT1G05630 | 29.570 | 186 | 110 | 5 | 55 | 233 | 572 | 743 | 3.37e-18 | 85.1 |
| MS.gene023268.t1 | AT2G31830 | 25.954 | 262 | 146 | 7 | 55 | 282 | 581 | 828 | 3.46e-18 | 85.1 |
| MS.gene023268.t1 | AT2G31830 | 25.954 | 262 | 146 | 7 | 55 | 282 | 581 | 828 | 3.71e-18 | 84.7 |
Find 51 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTATGGAATTCCATTTAT+TGG | 0.159218 | 4.3:-17503988 | None:intergenic |
| ACAATGAGATTTCCAATAAA+TGG | 0.225672 | 4.3:+17503976 | MS.gene023268:CDS |
| CTTGTATTTGTGTTTGTCCT+TGG | 0.283816 | 4.3:-17503580 | None:intergenic |
| GTGTGTAGCCATCTAGCTTC+AGG | 0.308501 | 4.3:+17504759 | MS.gene023268:CDS |
| ACGCTTACTTGTAGAGAAAA+AGG | 0.326969 | 4.3:+17505499 | MS.gene023268:CDS |
| TGCTTGGAGATTTAAATTAT+AGG | 0.331581 | 4.3:+17505453 | MS.gene023268:CDS |
| TCTAAAAGCTTCAAATGTAT+TGG | 0.332943 | 4.3:+17503944 | MS.gene023268:CDS |
| TCATGGTCTAGAATATTTCT+TGG | 0.341551 | 4.3:-17504873 | None:intergenic |
| AATCAGAAAAGCTTTGAATA+AGG | 0.342999 | 4.3:+17504007 | MS.gene023268:CDS |
| TGTTTGTCCTTGGGATGATT+AGG | 0.356217 | 4.3:-17503570 | None:intergenic |
| CTAAAAGCTTCAAATGTATT+GGG | 0.357957 | 4.3:+17503945 | MS.gene023268:CDS |
| TGTGGCATAATGAGATGTTT+AGG | 0.368843 | 4.3:+17504176 | MS.gene023268:CDS |
| TTGTATTTGTGTTTGTCCTT+GGG | 0.382205 | 4.3:-17503579 | None:intergenic |
| TCCTGTGACATCTATGTACT+TGG | 0.396131 | 4.3:+17503794 | MS.gene023268:CDS |
| TTTAAACGTAGATGATTTGT+TGG | 0.420397 | 4.3:+17503757 | MS.gene023268:CDS |
| TGTGTAGCCATCTAGCTTCA+GGG | 0.426156 | 4.3:+17504760 | MS.gene023268:CDS |
| TTCCTTATTAGAAAATGATC+AGG | 0.438935 | 4.3:+17505529 | MS.gene023268:CDS |
| TCTACGTTTAAATCTTCATC+TGG | 0.441644 | 4.3:-17503746 | None:intergenic |
| AGTAAGCGTGTCGTTTCCTC+TGG | 0.445903 | 4.3:-17505485 | None:intergenic |
| TAACATGTGGCCTACATTAG+TGG | 0.470394 | 4.3:+17503434 | None:intergenic |
| TGCAGTCATGTAATATTGCT+TGG | 0.474593 | 4.3:+17505437 | MS.gene023268:intron |
| AGGATAATCTGCTATGAAGT+TGG | 0.477080 | 4.3:-17503490 | None:intergenic |
| ATGTATAATTAGCAAACAAA+TGG | 0.477259 | 4.3:+17504076 | MS.gene023268:CDS |
| CAACCTATGCATGACACACT+TGG | 0.485601 | 4.3:-17504155 | None:intergenic |
| TTTGTTAGTACATGGAACAT+AGG | 0.487262 | 4.3:+17503713 | MS.gene023268:CDS |
| TTGGAATATTCATATCTGTA+TGG | 0.499275 | 4.3:+17504099 | MS.gene023268:CDS |
| TTTGTTTGCTAATTATACAT+TGG | 0.521389 | 4.3:-17504073 | None:intergenic |
| ACACTTGGATGTTGAATGAA+TGG | 0.524578 | 4.3:-17504140 | None:intergenic |
| AAACGTAGATGATTTGTTGG+AGG | 0.529826 | 4.3:+17503760 | MS.gene023268:CDS |
| TTTCTTGGCAATTCAAACAA+AGG | 0.536236 | 4.3:-17504858 | None:intergenic |
| AAGAAGGGGATGAGAAGTGT+AGG | 0.538109 | 4.3:+17504787 | MS.gene023268:CDS |
| ATAATTAGCAAACAAATGGT+TGG | 0.541121 | 4.3:+17504080 | MS.gene023268:CDS |
| TTAGTACATGGAACATAGGT+GGG | 0.544468 | 4.3:+17503717 | MS.gene023268:CDS |
| AATTCAAACAAAGGACCTCT+AGG | 0.548525 | 4.3:-17504849 | None:intergenic |
| GTTAGTACATGGAACATAGG+TGG | 0.556986 | 4.3:+17503716 | MS.gene023268:CDS |
| ATCTTATTAGCCACTAATGT+AGG | 0.560756 | 4.3:-17503444 | None:intergenic |
| AAGATACTCAAGAAGCGACT+AGG | 0.561529 | 4.3:+17503462 | MS.gene023268:CDS |
| CATCCAAGTGTGTCATGCAT+AGG | 0.576317 | 4.3:+17504152 | MS.gene023268:CDS |
| GTGTAGCCATCTAGCTTCAG+GGG | 0.595621 | 4.3:+17504761 | MS.gene023268:CDS |
| CCCAAGTACATAGATGTCAC+AGG | 0.603987 | 4.3:-17503795 | None:intergenic |
| ACATTGGAAATCATCATGTG+TGG | 0.610903 | 4.3:-17504057 | None:intergenic |
| AACAAAGGTTCATCATAACT+AGG | 0.611095 | 4.3:-17503510 | None:intergenic |
| CCTGTGACATCTATGTACTT+GGG | 0.620340 | 4.3:+17503795 | MS.gene023268:CDS |
| AATGAGATGTTTAGGAAACA+AGG | 0.621139 | 4.3:+17504184 | MS.gene023268:CDS |
| AACAGTTCCTAATCATCCCA+AGG | 0.629549 | 4.3:+17503563 | MS.gene023268:CDS |
| ATGTCTGCAAAATTCAACAA+AGG | 0.633351 | 4.3:-17503525 | None:intergenic |
| TCTAGGACTAGCTTTCCTAG+AGG | 0.647556 | 4.3:+17504834 | MS.gene023268:CDS |
| TTATAGGATATCTCTTCCAG+AGG | 0.665637 | 4.3:+17505469 | MS.gene023268:CDS |
| TATTCATATCTGTATGGACA+AGG | 0.666150 | 4.3:+17504105 | MS.gene023268:CDS |
| AGTGTGTCATGCATAGGTTG+TGG | 0.684284 | 4.3:+17504158 | MS.gene023268:CDS |
| TGTAGCCATCTAGCTTCAGG+GGG | 0.696209 | 4.3:+17504762 | MS.gene023268:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGATTGATTAATTAATT+TGG | - | chr4.3:17506672-17506691 | None:intergenic | 10.0% |
| !! | TTAATAATATGAATTTCATA+TGG | - | chr4.3:17504250-17504269 | None:intergenic | 10.0% |
| !!! | AGATTAACATATTAATATTT+TGG | - | chr4.3:17505118-17505137 | None:intergenic | 10.0% |
| !!! | TTTAAAGAGAATTTTTTTAA+TGG | - | chr4.3:17505580-17505599 | None:intergenic | 10.0% |
| !! | TATTGTTATCCTTATTATAT+AGG | + | chr4.3:17506871-17506890 | MS.gene023268:intron | 15.0% |
| !!! | ATTATAAACATGTTTTTCTA+TGG | - | chr4.3:17503855-17503874 | None:intergenic | 15.0% |
| !!! | ATTTATAATTCAGTCTTTTT+TGG | - | chr4.3:17506783-17506802 | None:intergenic | 15.0% |
| !!! | TTAACATATTAATATTTTGG+AGG | - | chr4.3:17505115-17505134 | None:intergenic | 15.0% |
| !!! | TTGTTGTTAATCTTAATTTT+AGG | + | chr4.3:17506129-17506148 | MS.gene023268:intron | 15.0% |
| !!! | TTTTCATGATTTATTATGAA+AGG | - | chr4.3:17504988-17505007 | None:intergenic | 15.0% |
| !!! | TTTTGTTTATTTTCATGTAA+AGG | + | chr4.3:17503687-17503706 | MS.gene023268:intron | 15.0% |
| !! | AAAATATCAAGCTTGAAATT+TGG | + | chr4.3:17504440-17504459 | MS.gene023268:intron | 20.0% |
| !! | AACATGAGAAACAAATAAAT+GGG | + | chr4.3:17506704-17506723 | MS.gene023268:intron | 20.0% |
| !! | AATACAGAAAATTATTCACT+TGG | - | chr4.3:17506612-17506631 | None:intergenic | 20.0% |
| !! | ACAATATTAGAAATGTTAAG+AGG | - | chr4.3:17503668-17503687 | None:intergenic | 20.0% |
| !! | ACATTATGTGATTAATTATG+TGG | - | chr4.3:17505413-17505432 | None:intergenic | 20.0% |
| !! | AGTAGTATTAGAAATCAAAT+TGG | - | chr4.3:17504921-17504940 | None:intergenic | 20.0% |
| !! | ATACAGAAAATTATTCACTT+GGG | - | chr4.3:17506611-17506630 | None:intergenic | 20.0% |
| !! | ATGTATAATTAGCAAACAAA+TGG | + | chr4.3:17504076-17504095 | MS.gene023268:CDS | 20.0% |
| !! | ATTATTAAATTAAACGCAAG+AGG | - | chr4.3:17504959-17504978 | None:intergenic | 20.0% |
| !! | CATAATAAATCATGAAAACA+AGG | + | chr4.3:17504990-17505009 | MS.gene023268:intron | 20.0% |
| !! | TTATTAAATTAAACGCAAGA+GGG | - | chr4.3:17504958-17504977 | None:intergenic | 20.0% |
| !!! | AATTTTTACTGCAGAAATAA+GGG | + | chr4.3:17506244-17506263 | MS.gene023268:intron | 20.0% |
| !!! | ATATTTACAACGTTTTTCTT+TGG | - | chr4.3:17505248-17505267 | None:intergenic | 20.0% |
| !!! | ATTGATTAATTAATTTGGAG+TGG | - | chr4.3:17506667-17506686 | None:intergenic | 20.0% |
| !!! | GATTTTAGTCTTTAGATTAT+TGG | - | chr4.3:17504637-17504656 | None:intergenic | 20.0% |
| !!! | TTGATTAATTAATTTGGAGT+GGG | - | chr4.3:17506666-17506685 | None:intergenic | 20.0% |
| !!! | TTTGTTTGCTAATTATACAT+TGG | - | chr4.3:17504076-17504095 | None:intergenic | 20.0% |
| ! | AAAGAGAATTAGAATTTGAG+TGG | + | chr4.3:17506448-17506467 | MS.gene023268:intron | 25.0% |
| ! | AATAAGGATAACAATATCCA+TGG | - | chr4.3:17506867-17506886 | None:intergenic | 25.0% |
| ! | AATGTCATATATGTTTGTGT+CGG | - | chr4.3:17505857-17505876 | None:intergenic | 25.0% |
| ! | ACAATGAGATTTCCAATAAA+TGG | + | chr4.3:17503976-17503995 | MS.gene023268:CDS | 25.0% |
| ! | ACTAAAATCATGCATCTAAT+TGG | + | chr4.3:17504648-17504667 | MS.gene023268:intron | 25.0% |
| ! | AGAATATTGATCATTAGTGA+CGG | - | chr4.3:17505065-17505084 | None:intergenic | 25.0% |
| ! | ATAATTAGCAAACAAATGGT+TGG | + | chr4.3:17504080-17504099 | MS.gene023268:CDS | 25.0% |
| ! | ATATGAATTTCATATGGAGT+TGG | - | chr4.3:17504244-17504263 | None:intergenic | 25.0% |
| ! | ATGGAAAAAAGATAGAAAAG+AGG | + | chr4.3:17505759-17505778 | MS.gene023268:intron | 25.0% |
| ! | ATTTCAGCCAACAAAATATT+TGG | - | chr4.3:17505017-17505036 | None:intergenic | 25.0% |
| ! | CAACATGAGAAACAAATAAA+TGG | + | chr4.3:17506703-17506722 | MS.gene023268:intron | 25.0% |
| ! | CCAAATTCGGATATATATTA+TGG | + | chr4.3:17505725-17505744 | MS.gene023268:intron | 25.0% |
| ! | CCATAATATATATCCGAATT+TGG | - | chr4.3:17505728-17505747 | None:intergenic | 25.0% |
| ! | CTAAAAGCTTCAAATGTATT+GGG | + | chr4.3:17503945-17503964 | MS.gene023268:CDS | 25.0% |
| ! | CTAATTTAATTGCATCCAAT+GGG | + | chr4.3:17505611-17505630 | MS.gene023268:intron | 25.0% |
| ! | CTACAAATATTGTCCAAATT+CGG | + | chr4.3:17505712-17505731 | MS.gene023268:intron | 25.0% |
| ! | CTCATTAATCAATTAGTATG+TGG | - | chr4.3:17505326-17505345 | None:intergenic | 25.0% |
| ! | CTGGTAGTATATAATATAGT+GGG | + | chr4.3:17505200-17505219 | MS.gene023268:intron | 25.0% |
| ! | GATTATGGAATTCCATTTAT+TGG | - | chr4.3:17503991-17504010 | None:intergenic | 25.0% |
| ! | GTATTAGAAATCAAATTGGA+CGG | - | chr4.3:17504917-17504936 | None:intergenic | 25.0% |
| ! | TCACTTTATAAGAATTTCGT+CGG | + | chr4.3:17506000-17506019 | MS.gene023268:intron | 25.0% |
| ! | TCTAAAAGCTTCAAATGTAT+TGG | + | chr4.3:17503944-17503963 | MS.gene023268:CDS | 25.0% |
| ! | TCTAATTTAATTGCATCCAA+TGG | + | chr4.3:17505610-17505629 | MS.gene023268:intron | 25.0% |
| ! | TCTGGTAGTATATAATATAG+TGG | + | chr4.3:17505199-17505218 | MS.gene023268:intron | 25.0% |
| ! | TCTTAAACTATTATCGATGT+CGG | - | chr4.3:17505892-17505911 | None:intergenic | 25.0% |
| ! | TGCTTGGAGATTTAAATTAT+AGG | + | chr4.3:17505453-17505472 | MS.gene023268:CDS | 25.0% |
| ! | TTATAGGCTTATAGCATTAT+AGG | - | chr4.3:17504215-17504234 | None:intergenic | 25.0% |
| ! | TTCCTTATTAGAAAATGATC+AGG | + | chr4.3:17505529-17505548 | MS.gene023268:CDS | 25.0% |
| ! | TTGGAATATTCATATCTGTA+TGG | + | chr4.3:17504099-17504118 | MS.gene023268:CDS | 25.0% |
| !! | AAAGGATTTTTGTTAGTACA+TGG | + | chr4.3:17503705-17503724 | MS.gene023268:intron | 25.0% |
| !! | AACCTGATCATTTTCTAATA+AGG | - | chr4.3:17505534-17505553 | None:intergenic | 25.0% |
| !! | ATAAACATGTTTTTCTATGG+TGG | - | chr4.3:17503852-17503871 | None:intergenic | 25.0% |
| !! | ATTCAAAGCTTTTCTGATTA+TGG | - | chr4.3:17504006-17504025 | None:intergenic | 25.0% |
| !! | CAATTTTTACTGCAGAAATA+AGG | + | chr4.3:17506243-17506262 | MS.gene023268:intron | 25.0% |
| !! | TAAAAGTGTGTAGTATAAAG+TGG | - | chr4.3:17506039-17506058 | None:intergenic | 25.0% |
| !! | TATACTACACACTTTTAACA+TGG | + | chr4.3:17506042-17506061 | MS.gene023268:intron | 25.0% |
| !! | TTCAAATTGTTACTTACTCA+TGG | - | chr4.3:17504893-17504912 | None:intergenic | 25.0% |
| !! | TTTAAACGTAGATGATTTGT+TGG | + | chr4.3:17503757-17503776 | MS.gene023268:CDS | 25.0% |
| !!! | AATACATTTGAAGCTTTTAG+AGG | - | chr4.3:17503945-17503964 | None:intergenic | 25.0% |
| !!! | AATCAGAAAAGCTTTGAATA+AGG | + | chr4.3:17504007-17504026 | MS.gene023268:CDS | 25.0% |
| !!! | ATAATTCAGTCTTTTTTGGA+AGG | - | chr4.3:17506779-17506798 | None:intergenic | 25.0% |
| !!! | ATGTTGCTGAAATTTTTTCT+AGG | + | chr4.3:17504817-17504836 | MS.gene023268:CDS | 25.0% |
| !!! | GTTCTGTTTTATTACAATTC+AGG | + | chr4.3:17503904-17503923 | MS.gene023268:intron | 25.0% |
| !!! | TAATTCAGTCTTTTTTGGAA+GGG | - | chr4.3:17506778-17506797 | None:intergenic | 25.0% |
| AACAAAGGTTCATCATAACT+AGG | - | chr4.3:17503513-17503532 | None:intergenic | 30.0% | |
| AAGACAATTATTGAGCTAGT+TGG | + | chr4.3:17506806-17506825 | MS.gene023268:intron | 30.0% | |
| AATCAAGACTATCAGATCAT+AGG | + | chr4.3:17506210-17506229 | MS.gene023268:intron | 30.0% | |
| AATGAGATGTTTAGGAAACA+AGG | + | chr4.3:17504184-17504203 | MS.gene023268:CDS | 30.0% | |
| ACAATAAACAGAAATCTGGT+TGG | + | chr4.3:17505977-17505996 | MS.gene023268:intron | 30.0% | |
| AGAATAGTATGGTATGGAAA+GGG | + | chr4.3:17506158-17506177 | MS.gene023268:intron | 30.0% | |
| AGAATTAGAATTTGAGTGGA+AGG | + | chr4.3:17506452-17506471 | MS.gene023268:intron | 30.0% | |
| ATCTTATTAGCCACTAATGT+AGG | - | chr4.3:17503447-17503466 | None:intergenic | 30.0% | |
| ATGAGAAACAAATAAATGGG+AGG | + | chr4.3:17506707-17506726 | MS.gene023268:intron | 30.0% | |
| ATGTCTGCAAAATTCAACAA+AGG | - | chr4.3:17503528-17503547 | None:intergenic | 30.0% | |
| ATTCACCATCAGTGTAATTA+TGG | + | chr4.3:17506395-17506414 | MS.gene023268:intron | 30.0% | |
| CACTTTATAAGAATTTCGTC+GGG | + | chr4.3:17506001-17506020 | MS.gene023268:intron | 30.0% | |
| CGAATTTGGACAATATTTGT+AGG | - | chr4.3:17505714-17505733 | None:intergenic | 30.0% | |
| GATATATGACATATGTGATG+AGG | - | chr4.3:17504290-17504309 | None:intergenic | 30.0% | |
| TAGAATAGTATGGTATGGAA+AGG | + | chr4.3:17506157-17506176 | MS.gene023268:intron | 30.0% | |
| TAGGACAATAAACAGAAATC+TGG | + | chr4.3:17505973-17505992 | MS.gene023268:intron | 30.0% | |
| TATACAAAACATGGATCAGT+GGG | - | chr4.3:17503828-17503847 | None:intergenic | 30.0% | |
| TATACTACCAGAAAACAGAT+AGG | - | chr4.3:17505191-17505210 | None:intergenic | 30.0% | |
| TATGTCCATAATTACACTGA+TGG | - | chr4.3:17506403-17506422 | None:intergenic | 30.0% | |
| TATTCATATCTGTATGGACA+AGG | + | chr4.3:17504105-17504124 | MS.gene023268:CDS | 30.0% | |
| TCTACGTTTAAATCTTCATC+TGG | - | chr4.3:17503749-17503768 | None:intergenic | 30.0% | |
| TGATCAATATTCTCCAACTT+TGG | + | chr4.3:17505072-17505091 | MS.gene023268:intron | 30.0% | |
| TGTGATAGAATAGTATGGTA+TGG | + | chr4.3:17506152-17506171 | MS.gene023268:intron | 30.0% | |
| TTAGGTGTGATAGAATAGTA+TGG | + | chr4.3:17506147-17506166 | MS.gene023268:intron | 30.0% | |
| TTGTATTTGTGTTTGTCCTT+GGG | - | chr4.3:17503582-17503601 | None:intergenic | 30.0% | |
| TTGTTAATTTCTTACCAAGC+TGG | - | chr4.3:17505791-17505810 | None:intergenic | 30.0% | |
| TTTCTTGGCAATTCAAACAA+AGG | - | chr4.3:17504861-17504880 | None:intergenic | 30.0% | |
| TTTGGACAATATTTGTAGGT+AGG | - | chr4.3:17505710-17505729 | None:intergenic | 30.0% | |
| TTTGTTAGTACATGGAACAT+AGG | + | chr4.3:17503713-17503732 | MS.gene023268:CDS | 30.0% | |
| ! | ACAAGGTCCAAATATTTTGT+TGG | + | chr4.3:17505007-17505026 | MS.gene023268:intron | 30.0% |
| ! | ATGGAGTTGGTTATAGTTAT+AGG | - | chr4.3:17504231-17504250 | None:intergenic | 30.0% |
| ! | CTAATGATGGAGTTAATGAA+CGG | + | chr4.3:17505641-17505660 | MS.gene023268:intron | 30.0% |
| ! | TCATGGTCTAGAATATTTCT+TGG | - | chr4.3:17504876-17504895 | None:intergenic | 30.0% |
| !! | TAGTATATAATATAGTGGGC+CGG | + | chr4.3:17505204-17505223 | MS.gene023268:intron | 30.0% |
| !! | TCTACACCAATTAATTTGCA+GGG | + | chr4.3:17504690-17504709 | MS.gene023268:intron | 30.0% |
| !! | TTCTACACCAATTAATTTGC+AGG | + | chr4.3:17504689-17504708 | MS.gene023268:intron | 30.0% |
| !! | TTGTACACCAATTAATTTGC+AGG | + | chr4.3:17504602-17504621 | MS.gene023268:intron | 30.0% |
| !! | TTTTAAAAGGTCGACATTGA+CGG | - | chr4.3:17504531-17504550 | None:intergenic | 30.0% |
| !!! | CATAAAGTTTTTTGTTGCTG+AGG | + | chr4.3:17506501-17506520 | MS.gene023268:intron | 30.0% |
| !!! | TTTGGAGGCATTTTTTCTAT+GGG | - | chr4.3:17505100-17505119 | None:intergenic | 30.0% |
| !!! | TTTTGGAGGCATTTTTTCTA+TGG | - | chr4.3:17505101-17505120 | None:intergenic | 30.0% |
| AATGGGAATGAAGCTAATGA+TGG | + | chr4.3:17505628-17505647 | MS.gene023268:intron | 35.0% | |
| AATTCAAACAAAGGACCTCT+AGG | - | chr4.3:17504852-17504871 | None:intergenic | 35.0% | |
| AATTTAAGAGGATGGCATGA+AGG | + | chr4.3:17505668-17505687 | MS.gene023268:intron | 35.0% | |
| AATTTGAGTGGAAGGAAAGT+GGG | + | chr4.3:17506460-17506479 | MS.gene023268:intron | 35.0% | |
| ACACTTGGATGTTGAATGAA+TGG | - | chr4.3:17504143-17504162 | None:intergenic | 35.0% | |
| ACAGAACCCTGCAAATTAAT+TGG | - | chr4.3:17504699-17504718 | None:intergenic | 35.0% | |
| ACATTGGAAATCATCATGTG+TGG | - | chr4.3:17504060-17504079 | None:intergenic | 35.0% | |
| ACGCTTACTTGTAGAGAAAA+AGG | + | chr4.3:17505499-17505518 | MS.gene023268:CDS | 35.0% | |
| ACTTGTAGAGAAAAAGGACT+GGG | + | chr4.3:17505505-17505524 | MS.gene023268:CDS | 35.0% | |
| AGAAATAAGGGTTTCATCTG+AGG | + | chr4.3:17506256-17506275 | MS.gene023268:intron | 35.0% | |
| AGGATAATCTGCTATGAAGT+TGG | - | chr4.3:17503493-17503512 | None:intergenic | 35.0% | |
| AGTTGGTTAGTACTAGCATA+AGG | + | chr4.3:17506841-17506860 | MS.gene023268:intron | 35.0% | |
| ATCACTGTCAACATTCGATT+TGG | + | chr4.3:17504307-17504326 | MS.gene023268:intron | 35.0% | |
| ATGAACGGCAACAATTTAAG+AGG | + | chr4.3:17505656-17505675 | MS.gene023268:intron | 35.0% | |
| CAATTAACCAATGAGATGCA+AGG | - | chr4.3:17504572-17504591 | None:intergenic | 35.0% | |
| CAATTATTGAGCTAGTTGGA+AGG | + | chr4.3:17506810-17506829 | MS.gene023268:intron | 35.0% | |
| CTATACAAAACATGGATCAG+TGG | - | chr4.3:17503829-17503848 | None:intergenic | 35.0% | |
| CTTGTATTTGTGTTTGTCCT+TGG | - | chr4.3:17503583-17503602 | None:intergenic | 35.0% | |
| GCAGAAACCTGCAAATTAAT+TGG | - | chr4.3:17504612-17504631 | None:intergenic | 35.0% | |
| GCAGTAAAAATTGCCTTAAC+AGG | - | chr4.3:17506236-17506255 | None:intergenic | 35.0% | |
| GCTTGAAATTTGGATCATCA+CGG | + | chr4.3:17504450-17504469 | MS.gene023268:intron | 35.0% | |
| GTAACTTTCTATTTACGCAC+CGG | - | chr4.3:17505226-17505245 | None:intergenic | 35.0% | |
| GTAGAAAACAATCAAGCTTC+CGG | + | chr4.3:17506366-17506385 | MS.gene023268:intron | 35.0% | |
| GTTGGAAGGACATAATTAGT+TGG | + | chr4.3:17506824-17506843 | MS.gene023268:intron | 35.0% | |
| TACTTGTAGAGAAAAAGGAC+TGG | + | chr4.3:17505504-17505523 | MS.gene023268:CDS | 35.0% | |
| TAGGTAGGAGCAAATTTGAT+TGG | - | chr4.3:17505695-17505714 | None:intergenic | 35.0% | |
| TATGGTGGCTATACAAAACA+TGG | - | chr4.3:17503837-17503856 | None:intergenic | 35.0% | |
| TCTACATACAAGTTCATCTG+TGG | - | chr4.3:17506351-17506370 | None:intergenic | 35.0% | |
| TCTGTGGTAGAAACTTCAAA+AGG | - | chr4.3:17506335-17506354 | None:intergenic | 35.0% | |
| TGACATATGTGATGAGGTTA+TGG | - | chr4.3:17504284-17504303 | None:intergenic | 35.0% | |
| TGCAGTCATGTAATATTGCT+TGG | + | chr4.3:17505437-17505456 | MS.gene023268:intron | 35.0% | |
| TGTGGCATAATGAGATGTTT+AGG | + | chr4.3:17504176-17504195 | MS.gene023268:CDS | 35.0% | |
| TTAGTACATGGAACATAGGT+GGG | + | chr4.3:17503717-17503736 | MS.gene023268:CDS | 35.0% | |
| TTATAGGATATCTCTTCCAG+AGG | + | chr4.3:17505469-17505488 | MS.gene023268:CDS | 35.0% | |
| ! | ACTGATGGTGAATTTACAAC+CGG | - | chr4.3:17506388-17506407 | None:intergenic | 35.0% |
| ! | ATCATTAGCTTCATTCCCAT+TGG | - | chr4.3:17505629-17505648 | None:intergenic | 35.0% |
| ! | TATTATGGTTGCTGTTGTCA+TGG | + | chr4.3:17505740-17505759 | MS.gene023268:intron | 35.0% |
| ! | TCTAAAACCTTGCATCTCAT+TGG | + | chr4.3:17504562-17504581 | MS.gene023268:intron | 35.0% |
| ! | TGAGGAGTATATAGTGAAGT+TGG | + | chr4.3:17506519-17506538 | MS.gene023268:intron | 35.0% |
| !! | AAACGTAGATGATTTGTTGG+AGG | + | chr4.3:17503760-17503779 | MS.gene023268:CDS | 35.0% |
| !! | AAAGTGTCCTATCTGTTTTC+TGG | + | chr4.3:17505181-17505200 | MS.gene023268:intron | 35.0% |
| !!! | GACTATTGGCTGCTTTTAAA+AGG | - | chr4.3:17504544-17504563 | None:intergenic | 35.0% |
| !!! | GATGCAAGGTTTTAGACTAT+TGG | - | chr4.3:17504558-17504577 | None:intergenic | 35.0% |
| !!! | TTGGAGGCATTTTTTCTATG+GGG | - | chr4.3:17505099-17505118 | None:intergenic | 35.0% |
| AAAGTGGGAAAGTTGTTGCA+GGG | + | chr4.3:17506475-17506494 | MS.gene023268:intron | 40.0% | |
| AACAGTTCCTAATCATCCCA+AGG | + | chr4.3:17503563-17503582 | MS.gene023268:CDS | 40.0% | |
| AAGAATTTCGTCGGGAAATC+TGG | + | chr4.3:17506009-17506028 | MS.gene023268:intron | 40.0% | |
| AAGATACTCAAGAAGCGACT+AGG | + | chr4.3:17503462-17503481 | MS.gene023268:CDS | 40.0% | |
| ACGGCAACAATTTAAGAGGA+TGG | + | chr4.3:17505660-17505679 | MS.gene023268:intron | 40.0% | |
| ATCAGATCATAGGCCTGTTA+AGG | + | chr4.3:17506220-17506239 | MS.gene023268:intron | 40.0% | |
| ATCCAAGTACTAGTGATCAG+AGG | - | chr4.3:17503625-17503644 | None:intergenic | 40.0% | |
| ATCCTCTGATCACTAGTACT+TGG | + | chr4.3:17503620-17503639 | MS.gene023268:intron | 40.0% | |
| CAATACAACAACCACTGATG+TGG | - | chr4.3:17504371-17504390 | None:intergenic | 40.0% | |
| CCTGTGACATCTATGTACTT+GGG | + | chr4.3:17503795-17503814 | MS.gene023268:CDS | 40.0% | |
| GAATTTGAGTGGAAGGAAAG+TGG | + | chr4.3:17506459-17506478 | MS.gene023268:intron | 40.0% | |
| GTTAGTACATGGAACATAGG+TGG | + | chr4.3:17503716-17503735 | MS.gene023268:CDS | 40.0% | |
| TCATGCAGTAAGCACATTAG+TGG | - | chr4.3:17504476-17504495 | None:intergenic | 40.0% | |
| TCCTGTGACATCTATGTACT+TGG | + | chr4.3:17503794-17503813 | MS.gene023268:CDS | 40.0% | |
| TGAAACAACTGGAGTACACA+AGG | + | chr4.3:17506183-17506202 | MS.gene023268:intron | 40.0% | |
| TGTATGAGTCAGTGTCATGT+CGG | + | chr4.3:17505934-17505953 | MS.gene023268:intron | 40.0% | |
| TGTTTGTCCTTGGGATGATT+AGG | - | chr4.3:17503573-17503592 | None:intergenic | 40.0% | |
| TTAGTACTAGCATAAGGCCA+TGG | + | chr4.3:17506847-17506866 | MS.gene023268:intron | 40.0% | |
| ! | ATGTGTGGGATTTTTCCTAG+AGG | - | chr4.3:17504337-17504356 | None:intergenic | 40.0% |
| ! | TGGAAAGGGTTTGAAACAAC+TGG | + | chr4.3:17506172-17506191 | MS.gene023268:intron | 40.0% |
| ! | TTTTCTATGGGGACCAAAGT+TGG | - | chr4.3:17505088-17505107 | None:intergenic | 40.0% |
| !! | ATTCGATTTGGATTGCCTCT+AGG | + | chr4.3:17504319-17504338 | MS.gene023268:intron | 40.0% |
| AAGTGGGAAAGTTGTTGCAG+GGG | + | chr4.3:17506476-17506495 | MS.gene023268:intron | 45.0% | |
| AGTGTGTCATGCATAGGTTG+TGG | + | chr4.3:17504158-17504177 | MS.gene023268:CDS | 45.0% | |
| ATTTCGTCGGGAAATCTGGT+TGG | + | chr4.3:17506013-17506032 | MS.gene023268:intron | 45.0% | |
| CAACCTATGCATGACACACT+TGG | - | chr4.3:17504158-17504177 | None:intergenic | 45.0% | |
| CATCCAAGTGTGTCATGCAT+AGG | + | chr4.3:17504152-17504171 | MS.gene023268:CDS | 45.0% | |
| CCCAAGTACATAGATGTCAC+AGG | - | chr4.3:17503798-17503817 | None:intergenic | 45.0% | |
| GAAAGTGGGAAAGTTGTTGC+AGG | + | chr4.3:17506474-17506493 | MS.gene023268:intron | 45.0% | |
| TGGTAACTGCACGAATGTGT+GGG | - | chr4.3:17504351-17504370 | None:intergenic | 45.0% | |
| ! | AAGAAGGGGATGAGAAGTGT+AGG | + | chr4.3:17504787-17504806 | MS.gene023268:CDS | 45.0% |
| ! | TGTGTAGCCATCTAGCTTCA+GGG | + | chr4.3:17504760-17504779 | MS.gene023268:CDS | 45.0% |
| !! | AAGGTCGACATTGACGGATT+TGG | - | chr4.3:17504525-17504544 | None:intergenic | 45.0% |
| !! | TCTAGGACTAGCTTTCCTAG+AGG | + | chr4.3:17504834-17504853 | MS.gene023268:CDS | 45.0% |
| AGTGGGAAAGTTGTTGCAGG+GGG | + | chr4.3:17506477-17506496 | MS.gene023268:intron | 50.0% | |
| CGGAGTACACTGACACATGT+AGG | + | chr4.3:17505954-17505973 | MS.gene023268:intron | 50.0% | |
| GTGGTAACTGCACGAATGTG+TGG | - | chr4.3:17504352-17504371 | None:intergenic | 50.0% | |
| TAGCTTCAGGGGGCAAAGAA+GGG | + | chr4.3:17504772-17504791 | MS.gene023268:CDS | 50.0% | |
| TCGTGCAGTTACCACATCAG+TGG | + | chr4.3:17504357-17504376 | MS.gene023268:intron | 50.0% | |
| ! | GTGTAGCCATCTAGCTTCAG+GGG | + | chr4.3:17504761-17504780 | MS.gene023268:CDS | 50.0% |
| ! | GTGTGTAGCCATCTAGCTTC+AGG | + | chr4.3:17504759-17504778 | MS.gene023268:CDS | 50.0% |
| ! | TGTAGCCATCTAGCTTCAGG+GGG | + | chr4.3:17504762-17504781 | MS.gene023268:CDS | 50.0% |
| !! | AGTAAGCGTGTCGTTTCCTC+TGG | - | chr4.3:17505488-17505507 | None:intergenic | 50.0% |
| AAAAGAGGCGAGCACCAGCT+TGG | + | chr4.3:17505774-17505793 | MS.gene023268:intron | 55.0% | |
| AGCTTCAGGGGGCAAAGAAG+GGG | + | chr4.3:17504773-17504792 | MS.gene023268:CDS | 55.0% | |
| CTAGCTTCAGGGGGCAAAGA+AGG | + | chr4.3:17504771-17504790 | MS.gene023268:CDS | 55.0% | |
| CTTTGCCCCCTGAAGCTAGA+TGG | - | chr4.3:17504770-17504789 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 17503438 | 17506901 | 17503438 | ID=MS.gene023268 |
| chr4.3 | mRNA | 17503438 | 17506901 | 17503438 | ID=MS.gene023268.t1;Parent=MS.gene023268 |
| chr4.3 | exon | 17503438 | 17503601 | 17503438 | ID=MS.gene023268.t1.exon1;Parent=MS.gene023268.t1 |
| chr4.3 | CDS | 17503438 | 17503601 | 17503438 | ID=cds.MS.gene023268.t1;Parent=MS.gene023268.t1 |
| chr4.3 | exon | 17503709 | 17503816 | 17503709 | ID=MS.gene023268.t1.exon2;Parent=MS.gene023268.t1 |
| chr4.3 | CDS | 17503709 | 17503816 | 17503709 | ID=cds.MS.gene023268.t1;Parent=MS.gene023268.t1 |
| chr4.3 | exon | 17503926 | 17504205 | 17503926 | ID=MS.gene023268.t1.exon3;Parent=MS.gene023268.t1 |
| chr4.3 | CDS | 17503926 | 17504205 | 17503926 | ID=cds.MS.gene023268.t1;Parent=MS.gene023268.t1 |
| chr4.3 | exon | 17504711 | 17504895 | 17504711 | ID=MS.gene023268.t1.exon4;Parent=MS.gene023268.t1 |
| chr4.3 | CDS | 17504711 | 17504895 | 17504711 | ID=cds.MS.gene023268.t1;Parent=MS.gene023268.t1 |
| chr4.3 | exon | 17505442 | 17505550 | 17505442 | ID=MS.gene023268.t1.exon5;Parent=MS.gene023268.t1 |
| chr4.3 | CDS | 17505442 | 17505550 | 17505442 | ID=cds.MS.gene023268.t1;Parent=MS.gene023268.t1 |
| chr4.3 | exon | 17506893 | 17506901 | 17506893 | ID=MS.gene023268.t1.exon6;Parent=MS.gene023268.t1 |
| chr4.3 | CDS | 17506893 | 17506901 | 17506893 | ID=cds.MS.gene023268.t1;Parent=MS.gene023268.t1 |
| Gene Sequence |
| Protein sequence |