Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061907.t1 | XP_003625521.1 | 94.8 | 459 | 13 | 1 | 1 | 448 | 41 | 499 | 8.30E-253 | 882.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061907.t1 | Q0WT19 | 55.2 | 489 | 154 | 12 | 6 | 448 | 6 | 475 | 3.1e-139 | 496.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061907.t1 | G7L0M4 | 94.8 | 459 | 13 | 1 | 1 | 448 | 41 | 499 | 6.0e-253 | 882.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene061907 | MS.gene023268 | PPI |
MS.gene061907 | MS.gene29230 | PPI |
MS.gene061907 | MS.gene34965 | PPI |
MS.gene061907 | MS.gene028184 | PPI |
MS.gene08351 | MS.gene061907 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061907.t1 | MTR_7g100070 | 94.771 | 459 | 13 | 1 | 1 | 448 | 1 | 459 | 0.0 | 902 |
MS.gene061907.t1 | MTR_7g100070 | 94.771 | 459 | 13 | 1 | 1 | 448 | 41 | 499 | 0.0 | 902 |
MS.gene061907.t1 | MTR_7g100070 | 94.553 | 459 | 13 | 2 | 1 | 448 | 1 | 458 | 0.0 | 896 |
MS.gene061907.t1 | MTR_7g095260 | 58.140 | 258 | 88 | 4 | 160 | 397 | 224 | 481 | 8.01e-98 | 303 |
MS.gene061907.t1 | MTR_7g095260 | 63.158 | 76 | 28 | 0 | 84 | 159 | 34 | 109 | 5.30e-24 | 104 |
MS.gene061907.t1 | MTR_1g038810 | 41.026 | 429 | 177 | 10 | 11 | 388 | 10 | 413 | 2.65e-97 | 300 |
MS.gene061907.t1 | MTR_7g095260 | 58.140 | 258 | 88 | 4 | 160 | 397 | 276 | 533 | 3.88e-97 | 302 |
MS.gene061907.t1 | MTR_7g095260 | 44.586 | 157 | 72 | 4 | 10 | 159 | 13 | 161 | 6.91e-30 | 122 |
MS.gene061907.t1 | MTR_6g072010 | 45.640 | 344 | 141 | 9 | 91 | 390 | 47 | 388 | 1.33e-96 | 296 |
MS.gene061907.t1 | MTR_6g072010 | 45.640 | 344 | 141 | 9 | 91 | 390 | 58 | 399 | 3.78e-96 | 295 |
MS.gene061907.t1 | MTR_5g006820 | 53.901 | 282 | 88 | 4 | 169 | 430 | 351 | 610 | 4.49e-96 | 301 |
MS.gene061907.t1 | MTR_5g006820 | 63.636 | 77 | 28 | 0 | 84 | 160 | 88 | 164 | 2.71e-26 | 112 |
MS.gene061907.t1 | MTR_1g038810 | 41.259 | 429 | 172 | 11 | 11 | 388 | 10 | 409 | 2.20e-94 | 292 |
MS.gene061907.t1 | MTR_1g103330 | 55.849 | 265 | 96 | 4 | 157 | 401 | 301 | 564 | 5.66e-94 | 295 |
MS.gene061907.t1 | MTR_1g103330 | 43.396 | 159 | 83 | 4 | 5 | 159 | 6 | 161 | 3.69e-28 | 117 |
MS.gene061907.t1 | MTR_1g071680 | 55.426 | 258 | 95 | 4 | 153 | 390 | 269 | 526 | 1.17e-92 | 291 |
MS.gene061907.t1 | MTR_1g071680 | 42.529 | 174 | 86 | 4 | 6 | 167 | 7 | 178 | 4.52e-33 | 131 |
MS.gene061907.t1 | MTR_6g009260 | 42.246 | 374 | 165 | 8 | 76 | 400 | 44 | 415 | 2.70e-90 | 281 |
MS.gene061907.t1 | MTR_8g091360 | 53.053 | 262 | 99 | 4 | 164 | 401 | 305 | 566 | 9.34e-90 | 284 |
MS.gene061907.t1 | MTR_8g091360 | 68.056 | 72 | 23 | 0 | 89 | 160 | 140 | 211 | 3.60e-24 | 105 |
MS.gene061907.t1 | MTR_8g043480 | 50.394 | 254 | 105 | 3 | 165 | 397 | 38 | 291 | 4.34e-84 | 261 |
MS.gene061907.t1 | MTR_8g043480 | 50.394 | 254 | 105 | 3 | 165 | 397 | 168 | 421 | 2.42e-82 | 260 |
MS.gene061907.t1 | MTR_8g043480 | 61.972 | 71 | 27 | 0 | 89 | 159 | 9 | 79 | 1.15e-21 | 97.4 |
MS.gene061907.t1 | MTR_8g043480 | 51.200 | 250 | 101 | 3 | 169 | 397 | 237 | 486 | 8.97e-82 | 261 |
MS.gene061907.t1 | MTR_8g043480 | 61.972 | 71 | 27 | 0 | 89 | 159 | 74 | 144 | 1.21e-21 | 97.8 |
MS.gene061907.t1 | MTR_5g014090 | 48.289 | 263 | 117 | 4 | 152 | 395 | 345 | 607 | 2.70e-76 | 250 |
MS.gene061907.t1 | MTR_5g014090 | 32.967 | 182 | 103 | 4 | 6 | 171 | 7 | 185 | 8.85e-26 | 110 |
MS.gene061907.t1 | MTR_1g097690 | 49.587 | 242 | 101 | 5 | 175 | 398 | 354 | 592 | 9.91e-75 | 246 |
MS.gene061907.t1 | MTR_1g097690 | 43.269 | 104 | 57 | 2 | 70 | 173 | 83 | 184 | 3.12e-19 | 90.9 |
MS.gene061907.t1 | MTR_4g098850 | 45.051 | 293 | 129 | 7 | 128 | 394 | 544 | 830 | 1.36e-72 | 244 |
MS.gene061907.t1 | MTR_4g098850 | 46.193 | 197 | 88 | 4 | 216 | 394 | 2 | 198 | 1.19e-50 | 184 |
MS.gene061907.t1 | MTR_4g098850 | 35.976 | 164 | 82 | 5 | 11 | 171 | 290 | 433 | 5.92e-24 | 105 |
MS.gene061907.t1 | MTR_6g042240 | 48.387 | 248 | 109 | 5 | 168 | 398 | 325 | 570 | 3.26e-71 | 236 |
MS.gene061907.t1 | MTR_6g042240 | 58.108 | 74 | 31 | 0 | 86 | 159 | 54 | 127 | 7.13e-22 | 99.0 |
MS.gene061907.t1 | MTR_6g042240 | 48.193 | 249 | 108 | 5 | 168 | 398 | 365 | 610 | 7.87e-71 | 236 |
MS.gene061907.t1 | MTR_6g042240 | 58.108 | 74 | 31 | 0 | 86 | 159 | 94 | 167 | 7.61e-22 | 99.0 |
MS.gene061907.t1 | MTR_6g042240 | 48.193 | 249 | 108 | 5 | 168 | 398 | 378 | 623 | 2.16e-70 | 235 |
MS.gene061907.t1 | MTR_6g042240 | 58.108 | 74 | 31 | 0 | 86 | 159 | 107 | 180 | 8.15e-22 | 98.6 |
MS.gene061907.t1 | MTR_8g091360 | 55.102 | 147 | 55 | 2 | 164 | 299 | 305 | 451 | 2.43e-46 | 167 |
MS.gene061907.t1 | MTR_8g091360 | 68.056 | 72 | 23 | 0 | 89 | 160 | 140 | 211 | 2.74e-24 | 105 |
MS.gene061907.t1 | MTR_1g097690 | 56.250 | 128 | 48 | 2 | 175 | 295 | 354 | 480 | 3.23e-44 | 161 |
MS.gene061907.t1 | MTR_1g097690 | 43.269 | 104 | 57 | 2 | 70 | 173 | 83 | 184 | 1.94e-19 | 90.9 |
MS.gene061907.t1 | MTR_5g014090 | 41.089 | 202 | 89 | 4 | 152 | 345 | 345 | 524 | 5.96e-40 | 150 |
MS.gene061907.t1 | MTR_5g014090 | 32.955 | 176 | 100 | 3 | 11 | 171 | 13 | 185 | 4.26e-26 | 111 |
MS.gene061907.t1 | MTR_1g078100 | 27.027 | 481 | 229 | 18 | 58 | 435 | 184 | 645 | 2.53e-35 | 139 |
MS.gene061907.t1 | MTR_1g078100 | 27.027 | 481 | 229 | 18 | 58 | 435 | 195 | 656 | 2.78e-35 | 139 |
MS.gene061907.t1 | MTR_1g078100 | 27.027 | 481 | 229 | 18 | 58 | 435 | 464 | 925 | 4.69e-35 | 139 |
MS.gene061907.t1 | MTR_6g092670 | 27.229 | 415 | 212 | 14 | 52 | 393 | 522 | 919 | 7.37e-31 | 126 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061907.t1 | AT2G37440 | 55.828 | 489 | 151 | 13 | 6 | 448 | 6 | 475 | 9.18e-179 | 508 |
MS.gene061907.t1 | AT2G37440 | 55.828 | 489 | 151 | 13 | 6 | 448 | 6 | 475 | 9.18e-179 | 508 |
MS.gene061907.t1 | AT2G37440 | 58.374 | 406 | 108 | 10 | 92 | 448 | 1 | 394 | 4.18e-154 | 442 |
MS.gene061907.t1 | AT2G01900 | 41.990 | 412 | 180 | 9 | 11 | 389 | 2 | 387 | 2.24e-99 | 304 |
MS.gene061907.t1 | AT2G01900 | 41.627 | 418 | 185 | 9 | 5 | 389 | 4 | 395 | 2.80e-99 | 304 |
MS.gene061907.t1 | AT2G01900 | 42.184 | 403 | 183 | 8 | 11 | 389 | 2 | 378 | 2.88e-99 | 303 |
MS.gene061907.t1 | AT2G32010 | 54.815 | 270 | 102 | 3 | 152 | 401 | 306 | 575 | 4.76e-96 | 301 |
MS.gene061907.t1 | AT2G32010 | 44.595 | 148 | 73 | 5 | 16 | 159 | 18 | 160 | 1.10e-28 | 119 |
MS.gene061907.t1 | AT2G32010 | 54.815 | 270 | 102 | 3 | 152 | 401 | 306 | 575 | 4.76e-96 | 301 |
MS.gene061907.t1 | AT2G32010 | 44.595 | 148 | 73 | 5 | 16 | 159 | 18 | 160 | 1.10e-28 | 119 |
MS.gene061907.t1 | AT2G32010 | 54.815 | 270 | 102 | 3 | 152 | 401 | 306 | 575 | 4.76e-96 | 301 |
MS.gene061907.t1 | AT2G32010 | 44.595 | 148 | 73 | 5 | 16 | 159 | 18 | 160 | 1.10e-28 | 119 |
MS.gene061907.t1 | AT2G32010 | 54.815 | 270 | 102 | 3 | 152 | 401 | 306 | 575 | 4.76e-96 | 301 |
MS.gene061907.t1 | AT2G32010 | 44.595 | 148 | 73 | 5 | 16 | 159 | 18 | 160 | 1.10e-28 | 119 |
MS.gene061907.t1 | AT1G05470 | 51.701 | 294 | 100 | 4 | 157 | 430 | 334 | 605 | 1.09e-95 | 300 |
MS.gene061907.t1 | AT1G05470 | 42.593 | 162 | 89 | 3 | 1 | 159 | 1 | 161 | 4.03e-30 | 123 |
MS.gene061907.t1 | AT1G05470 | 51.701 | 294 | 100 | 4 | 157 | 430 | 334 | 605 | 1.09e-95 | 300 |
MS.gene061907.t1 | AT1G05470 | 42.593 | 162 | 89 | 3 | 1 | 159 | 1 | 161 | 4.03e-30 | 123 |
MS.gene061907.t1 | AT5G65090 | 54.800 | 250 | 92 | 4 | 164 | 393 | 192 | 440 | 1.44e-92 | 288 |
MS.gene061907.t1 | AT5G65090 | 60.000 | 75 | 30 | 0 | 90 | 164 | 10 | 84 | 1.67e-22 | 100 |
MS.gene061907.t1 | AT5G65090 | 54.800 | 250 | 92 | 4 | 164 | 393 | 255 | 503 | 6.85e-92 | 288 |
MS.gene061907.t1 | AT5G65090 | 60.000 | 75 | 30 | 0 | 90 | 164 | 73 | 147 | 2.76e-22 | 99.8 |
MS.gene061907.t1 | AT5G65090 | 54.800 | 250 | 92 | 4 | 164 | 393 | 255 | 503 | 6.85e-92 | 288 |
MS.gene061907.t1 | AT5G65090 | 60.000 | 75 | 30 | 0 | 90 | 164 | 73 | 147 | 2.76e-22 | 99.8 |
MS.gene061907.t1 | AT3G63240 | 54.800 | 250 | 93 | 2 | 168 | 397 | 274 | 523 | 8.97e-90 | 283 |
MS.gene061907.t1 | AT3G63240 | 45.570 | 158 | 77 | 5 | 6 | 160 | 7 | 158 | 7.20e-31 | 125 |
MS.gene061907.t1 | AT3G63240 | 54.800 | 250 | 93 | 2 | 168 | 397 | 274 | 523 | 8.97e-90 | 283 |
MS.gene061907.t1 | AT3G63240 | 45.570 | 158 | 77 | 5 | 6 | 160 | 7 | 158 | 7.20e-31 | 125 |
MS.gene061907.t1 | AT5G04980 | 55.696 | 237 | 84 | 3 | 171 | 386 | 156 | 392 | 3.15e-88 | 275 |
MS.gene061907.t1 | AT5G04980 | 55.696 | 237 | 84 | 3 | 171 | 386 | 191 | 427 | 1.44e-87 | 274 |
MS.gene061907.t1 | AT5G04980 | 63.235 | 68 | 25 | 0 | 89 | 156 | 8 | 75 | 1.50e-19 | 90.9 |
MS.gene061907.t1 | AT5G04980 | 55.696 | 237 | 84 | 3 | 171 | 386 | 191 | 427 | 1.44e-87 | 274 |
MS.gene061907.t1 | AT5G04980 | 63.235 | 68 | 25 | 0 | 89 | 156 | 8 | 75 | 1.50e-19 | 90.9 |
MS.gene061907.t1 | AT5G04980 | 55.696 | 237 | 84 | 3 | 171 | 386 | 220 | 456 | 1.47e-87 | 275 |
MS.gene061907.t1 | AT5G04980 | 63.235 | 68 | 25 | 0 | 89 | 156 | 37 | 104 | 1.43e-19 | 91.3 |
MS.gene061907.t1 | AT1G34120 | 49.160 | 238 | 100 | 4 | 168 | 386 | 178 | 413 | 1.73e-75 | 243 |
MS.gene061907.t1 | AT4G18010 | 48.971 | 243 | 106 | 4 | 170 | 394 | 387 | 629 | 6.31e-75 | 247 |
MS.gene061907.t1 | AT4G18010 | 33.333 | 180 | 97 | 5 | 6 | 164 | 8 | 185 | 3.90e-25 | 108 |
MS.gene061907.t1 | AT1G34120 | 49.160 | 238 | 100 | 4 | 168 | 386 | 329 | 564 | 1.25e-73 | 242 |
MS.gene061907.t1 | AT1G34120 | 57.143 | 70 | 30 | 0 | 90 | 159 | 101 | 170 | 8.59e-21 | 95.5 |
MS.gene061907.t1 | AT1G34120 | 49.160 | 238 | 100 | 4 | 168 | 386 | 333 | 568 | 1.47e-73 | 242 |
MS.gene061907.t1 | AT1G34120 | 57.143 | 70 | 30 | 0 | 90 | 159 | 105 | 174 | 8.98e-21 | 95.5 |
MS.gene061907.t1 | AT1G34120 | 49.160 | 238 | 99 | 5 | 168 | 386 | 333 | 567 | 6.36e-72 | 238 |
MS.gene061907.t1 | AT1G34120 | 57.143 | 70 | 30 | 0 | 90 | 159 | 105 | 174 | 8.96e-21 | 95.5 |
MS.gene061907.t1 | AT1G71710 | 43.158 | 285 | 129 | 8 | 135 | 398 | 369 | 641 | 7.54e-69 | 231 |
MS.gene061907.t1 | AT1G71710 | 54.321 | 81 | 36 | 1 | 79 | 159 | 109 | 188 | 2.69e-22 | 100 |
MS.gene061907.t1 | AT1G71710 | 43.158 | 285 | 129 | 8 | 135 | 398 | 378 | 650 | 9.09e-69 | 231 |
MS.gene061907.t1 | AT1G71710 | 54.321 | 81 | 36 | 1 | 79 | 159 | 118 | 197 | 3.18e-22 | 100 |
MS.gene061907.t1 | AT4G18010 | 49.231 | 195 | 82 | 3 | 170 | 347 | 387 | 581 | 5.13e-58 | 201 |
MS.gene061907.t1 | AT4G18010 | 33.333 | 180 | 97 | 5 | 6 | 164 | 8 | 185 | 4.59e-25 | 108 |
MS.gene061907.t1 | AT1G34120 | 55.882 | 136 | 52 | 2 | 168 | 295 | 329 | 464 | 2.28e-44 | 161 |
MS.gene061907.t1 | AT1G34120 | 57.143 | 70 | 30 | 0 | 90 | 159 | 101 | 170 | 4.82e-21 | 95.9 |
MS.gene061907.t1 | AT1G65580 | 26.835 | 436 | 196 | 16 | 62 | 393 | 213 | 629 | 3.11e-38 | 148 |
MS.gene061907.t1 | AT1G65580 | 26.835 | 436 | 196 | 16 | 62 | 393 | 479 | 895 | 5.62e-38 | 147 |
MS.gene061907.t1 | AT1G05630 | 27.451 | 459 | 245 | 16 | 62 | 447 | 541 | 984 | 6.17e-37 | 144 |
MS.gene061907.t1 | AT1G05630 | 29.226 | 349 | 176 | 13 | 62 | 354 | 541 | 874 | 9.51e-35 | 138 |
MS.gene061907.t1 | AT2G43900 | 25.330 | 454 | 249 | 16 | 69 | 448 | 556 | 993 | 1.70e-34 | 137 |
MS.gene061907.t1 | AT2G43900 | 25.330 | 454 | 249 | 16 | 69 | 448 | 556 | 993 | 1.96e-34 | 137 |
MS.gene061907.t1 | AT2G31830 | 28.571 | 385 | 187 | 14 | 89 | 402 | 579 | 946 | 7.01e-34 | 135 |
MS.gene061907.t1 | AT2G31830 | 28.571 | 385 | 187 | 14 | 89 | 402 | 579 | 946 | 7.26e-34 | 135 |
MS.gene061907.t1 | AT2G31830 | 29.781 | 319 | 157 | 11 | 89 | 354 | 579 | 883 | 1.06e-32 | 132 |
MS.gene061907.t1 | AT1G05630 | 31.776 | 214 | 121 | 8 | 62 | 263 | 541 | 741 | 1.01e-21 | 99.0 |
MS.gene061907.t1 | AT1G47510 | 27.244 | 312 | 162 | 13 | 89 | 376 | 53 | 323 | 1.05e-17 | 84.3 |
MS.gene061907.t1 | AT1G47510 | 27.652 | 264 | 134 | 10 | 109 | 354 | 9 | 233 | 3.87e-16 | 79.0 |
Find 91 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCATTGTTTGTTGTGTTTA+GGG | 0.163432 | 7.2:-11976606 | None:intergenic |
CCAGCTGACATATATGTTAT+TGG | 0.170567 | 7.2:+11975733 | MS.gene061907:CDS |
ACCTCAGATTATTCTGTTAC+AGG | 0.227155 | 7.2:+11974698 | MS.gene061907:CDS |
TTTCATTGTTTGTTGTGTTT+AGG | 0.238927 | 7.2:-11976607 | None:intergenic |
ACATGTGCAGTAACATTATT+TGG | 0.249799 | 7.2:+11977357 | MS.gene061907:intron |
CATTTAGTGGTACAATTTCT+TGG | 0.260400 | 7.2:-11976517 | None:intergenic |
CATGGGCTACCTTGGAAATA+AGG | 0.275680 | 7.2:+11976763 | MS.gene061907:CDS |
AAAGTCACCAAATGAAAATT+TGG | 0.280972 | 7.2:+11975681 | MS.gene061907:CDS |
TGTTTAGGGCTTGATGAATA+AGG | 0.282900 | 7.2:-11976592 | None:intergenic |
ACTAACATGGTTTCGATAAT+CGG | 0.290875 | 7.2:-11976708 | None:intergenic |
CGAAATTAGCTGTGAAGAAT+TGG | 0.311761 | 7.2:+11974645 | MS.gene061907:CDS |
TGCAGTAACATTATTTGGTT+GGG | 0.323446 | 7.2:+11977362 | MS.gene061907:intron |
TCGGGTTGGCACCGGCATCA+TGG | 0.329476 | 7.2:+11976745 | MS.gene061907:CDS |
CAATTCTTCACAGCTAATTT+CGG | 0.340578 | 7.2:-11974644 | None:intergenic |
CTGCTTCGTTTGCACTCACT+TGG | 0.363285 | 7.2:+11977128 | MS.gene061907:CDS |
AATCAGAAAATGTACGTTAG+AGG | 0.381947 | 7.2:+11977842 | MS.gene061907:CDS |
CAGCTGACATATATGTTATT+GGG | 0.381964 | 7.2:+11975734 | MS.gene061907:CDS |
ACAGGTGTGATAGAATTCTA+TGG | 0.399028 | 7.2:+11977804 | MS.gene061907:intron |
GTTTAGGGCTTGATGAATAA+GGG | 0.405435 | 7.2:-11976591 | None:intergenic |
AGCACGTTCCCAGCATTTAG+TGG | 0.407177 | 7.2:-11976530 | None:intergenic |
TGCAAGTTTGAGCAACATAT+TGG | 0.411047 | 7.2:-11977571 | None:intergenic |
AGGGCTAGCCACTTTGCTGC+GGG | 0.416097 | 7.2:-11976572 | None:intergenic |
TTTGTGGGGACGTGGAATGT+AGG | 0.418050 | 7.2:+11975655 | MS.gene061907:CDS |
CTAAATGCTGGGAACGTGCT+TGG | 0.423876 | 7.2:+11976533 | MS.gene061907:CDS |
CCATTTGCTTGCTTGCTACC+AGG | 0.430121 | 7.2:-11976655 | None:intergenic |
CTCTTGTGTAGGATGTTTGT+GGG | 0.430477 | 7.2:+11975640 | MS.gene061907:intron |
TAAATGCTGGGAACGTGCTT+GGG | 0.444324 | 7.2:+11976534 | MS.gene061907:CDS |
GAAATTGTACCACTAAATGC+TGG | 0.445434 | 7.2:+11976521 | MS.gene061907:CDS |
CGGGTTGGCACCGGCATCAT+GGG | 0.447268 | 7.2:+11976746 | MS.gene061907:CDS |
TTGTGGGGACGTGGAATGTA+GGG | 0.450793 | 7.2:+11975656 | MS.gene061907:CDS |
GTTTGCACTCACTTGGCCTC+CGG | 0.452017 | 7.2:+11977135 | MS.gene061907:CDS |
TGACGAGTTGCGTCGAAACT+TGG | 0.452102 | 7.2:+11977170 | MS.gene061907:CDS |
TACAAATGGCGTGAAACGTT+CGG | 0.459480 | 7.2:+11975399 | MS.gene061907:CDS |
GTGCAGTAACATTATTTGGT+TGG | 0.462119 | 7.2:+11977361 | MS.gene061907:intron |
GCTGCAGCACAACAAGTAGA+TGG | 0.473238 | 7.2:-11978010 | None:intergenic |
TCACTAATCCTCTCAACCTT+AGG | 0.476045 | 7.2:+11975449 | MS.gene061907:CDS |
GGGACAAGATCTTGGGATAG+TGG | 0.487764 | 7.2:-11977957 | None:intergenic |
AGAGGATTAGTGATGAATGA+AGG | 0.488020 | 7.2:-11975439 | None:intergenic |
GTACGAGGATGTAGCTATCT+TGG | 0.489085 | 7.2:-11974852 | None:intergenic |
CTGGTCGAATATTTGAAGGT+TGG | 0.497523 | 7.2:+11977495 | MS.gene061907:CDS |
CCTGGTAGCAAGCAAGCAAA+TGG | 0.497759 | 7.2:+11976655 | MS.gene061907:CDS |
ACTCTTGTGTAGGATGTTTG+TGG | 0.499456 | 7.2:+11975639 | MS.gene061907:intron |
AATGCTGGTCGAATATTTGA+AGG | 0.500439 | 7.2:+11977491 | MS.gene061907:CDS |
TTCATCAAGTATTTGTAAGT+AGG | 0.500841 | 7.2:-11977542 | None:intergenic |
GGCGTGAAACGTTCGGTGCA+TGG | 0.505889 | 7.2:+11975406 | MS.gene061907:CDS |
TGGTTGAAGCATTCTACAAA+TGG | 0.512632 | 7.2:+11975385 | MS.gene061907:CDS |
GTAGGATGTTTGTGGGGACG+TGG | 0.516565 | 7.2:+11975647 | MS.gene061907:intron |
AATAACGAACCTTATTTCCA+AGG | 0.520078 | 7.2:-11976772 | None:intergenic |
TCAAAAGCAACGCTTTAGCC+TGG | 0.520681 | 7.2:+11976637 | MS.gene061907:CDS |
ACCGGCATCATGGGCTACCT+TGG | 0.522568 | 7.2:+11976755 | MS.gene061907:CDS |
TAGTCAATTGAAAGTGTCTC+GGG | 0.522741 | 7.2:+11976727 | MS.gene061907:CDS |
CCAATAACATATATGTCAGC+TGG | 0.523558 | 7.2:-11975733 | None:intergenic |
CTCGTCACCACATTTCTCTC+CGG | 0.524471 | 7.2:-11977154 | None:intergenic |
TTAGTCAATTGAAAGTGTCT+CGG | 0.528023 | 7.2:+11976726 | MS.gene061907:CDS |
CTACTACAAGAATCTTGAAA+CGG | 0.529886 | 7.2:-11978095 | None:intergenic |
AATGTAGCAGAATTTGTGAA+TGG | 0.533693 | 7.2:-11977986 | None:intergenic |
TGCTCAAACTTGCAAATCAA+AGG | 0.537586 | 7.2:+11977580 | MS.gene061907:CDS |
GCAGTAACATTATTTGGTTG+GGG | 0.544614 | 7.2:+11977363 | MS.gene061907:intron |
AAAGTGTCTCGGGTTGGCAC+CGG | 0.545675 | 7.2:+11976737 | MS.gene061907:CDS |
TTAAGGATGGAGCAGAATGC+TGG | 0.546319 | 7.2:+11977476 | MS.gene061907:intron |
TCCAAGGTAGCCCATGATGC+CGG | 0.561325 | 7.2:-11976756 | None:intergenic |
AAACGAAGCAGAATGTGGTT+TGG | 0.562582 | 7.2:-11977116 | None:intergenic |
AGCATTTACCTAAGGTTGAG+AGG | 0.566487 | 7.2:-11975457 | None:intergenic |
ATAGAGAATACACTGGCCTA+TGG | 0.566815 | 7.2:-11977883 | None:intergenic |
AAGGGCTAGCCACTTTGCTG+CGG | 0.577787 | 7.2:-11976573 | None:intergenic |
TGTGGGGACGTGGAATGTAG+GGG | 0.581088 | 7.2:+11975657 | MS.gene061907:CDS |
ACTCATGTTCTAGTATGCCA+AGG | 0.581273 | 7.2:-11977233 | None:intergenic |
AGAATTCTATGGAAAGGAGA+AGG | 0.582288 | 7.2:+11977815 | MS.gene061907:CDS |
AGTCAAAATTCTCTGACCAT+AGG | 0.590762 | 7.2:+11977867 | MS.gene061907:CDS |
TGTGATAGAATTCTATGGAA+AGG | 0.592001 | 7.2:+11977809 | MS.gene061907:CDS |
CAGTAACATTATTTGGTTGG+GGG | 0.598927 | 7.2:+11977364 | MS.gene061907:intron |
ACAGTGGCCCCGCAGCAAAG+TGG | 0.601199 | 7.2:+11976564 | MS.gene061907:CDS |
AAATTGTACCACTAAATGCT+GGG | 0.602264 | 7.2:+11976522 | MS.gene061907:CDS |
GTGGGGACGTGGAATGTAGG+GGG | 0.604727 | 7.2:+11975658 | MS.gene061907:CDS |
AGTTTGAGCAACATATTGGT+CGG | 0.605423 | 7.2:-11977567 | None:intergenic |
ATATTTGAAGGTTGGAACGA+AGG | 0.607113 | 7.2:+11977503 | MS.gene061907:CDS |
CTCATGTTCTAGTATGCCAA+GGG | 0.607226 | 7.2:-11977232 | None:intergenic |
ACACTTTCAATTGACTAACA+TGG | 0.611634 | 7.2:-11976721 | None:intergenic |
CAATTGAAAGTGTCTCGGGT+TGG | 0.613575 | 7.2:+11976731 | MS.gene061907:CDS |
GTAGCAAGCAAGCAAATGGT+TGG | 0.620998 | 7.2:+11976659 | MS.gene061907:CDS |
GTCACCACATTTCTCTCCGG+AGG | 0.627775 | 7.2:-11977151 | None:intergenic |
GGGCTAGCCACTTTGCTGCG+GGG | 0.635408 | 7.2:-11976571 | None:intergenic |
ATGAATTTCATCGTAACTAG+CGG | 0.646094 | 7.2:-11977405 | None:intergenic |
AGTGCAAACGAAGCAGAATG+TGG | 0.656443 | 7.2:-11977121 | None:intergenic |
ACCTGTAACAGAATAATCTG+AGG | 0.659074 | 7.2:-11974699 | None:intergenic |
TTGGCCTCCGGAGAGAAATG+TGG | 0.669625 | 7.2:+11977147 | MS.gene061907:CDS |
AACTCGTGTTACTAGCAACA+AGG | 0.677771 | 7.2:+11978053 | MS.gene061907:CDS |
GCGTCGAAACTTGGACATCG+CGG | 0.722714 | 7.2:+11977179 | MS.gene061907:CDS |
GTGCTTGGGTCTGAGAACAG+TGG | 0.725376 | 7.2:+11976548 | MS.gene061907:CDS |
TCTTGTGTAGGATGTTTGTG+GGG | 0.735579 | 7.2:+11975641 | MS.gene061907:intron |
GCTGTGAATAGAGAATACAC+TGG | 0.824587 | 7.2:-11977890 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGTTAAATAATTAGAAATT+TGG | - | chr7.2:11977279-11977298 | None:intergenic | 10.0% |
!! | AAATCTAATTTATGTTGTAT+TGG | + | chr7.2:11976472-11976491 | MS.gene061907:intron | 15.0% |
!! | AAATTTCGTTAAATATTCTT+AGG | + | chr7.2:11975900-11975919 | MS.gene061907:intron | 15.0% |
!! | ACCACATATATTATATAATA+TGG | - | chr7.2:11976878-11976897 | None:intergenic | 15.0% |
!! | ATCATATAAAAATAAGAAGT+TGG | - | chr7.2:11976396-11976415 | None:intergenic | 15.0% |
!! | CTATCTAAGTAATTAATATT+TGG | + | chr7.2:11975342-11975361 | MS.gene061907:intron | 15.0% |
!! | TCCATATTATATAATATATG+TGG | + | chr7.2:11976874-11976893 | MS.gene061907:intron | 15.0% |
!! | TCTTTATTACTATAAATCAA+TGG | + | chr7.2:11977307-11977326 | MS.gene061907:intron | 15.0% |
!! | TTAAATAATCATTGAAATCA+AGG | - | chr7.2:11976031-11976050 | None:intergenic | 15.0% |
!! | TTAATTGATCCATATATAAA+AGG | - | chr7.2:11975882-11975901 | None:intergenic | 15.0% |
!!! | TAATTTGTTCTTTGTTAATT+TGG | + | chr7.2:11977333-11977352 | MS.gene061907:intron | 15.0% |
!!! | TACTGTAATTTTTTTCTTTT+GGG | + | chr7.2:11975316-11975335 | MS.gene061907:intron | 15.0% |
!!! | TTACTGTAATTTTTTTCTTT+TGG | + | chr7.2:11975315-11975334 | MS.gene061907:intron | 15.0% |
!!! | TTTATTTTATTTTTAGCAAG+AGG | + | chr7.2:11975583-11975602 | MS.gene061907:intron | 15.0% |
!! | AAAAATAAAACGCTTGTAAT+TGG | + | chr7.2:11975066-11975085 | MS.gene061907:intron | 20.0% |
!! | AAAATTTGGACTTGAAAAAT+TGG | + | chr7.2:11975695-11975714 | MS.gene061907:CDS | 20.0% |
!! | AAATTACCAGAAAAATTATC+TGG | - | chr7.2:11974877-11974896 | None:intergenic | 20.0% |
!! | ACTAAAAAACAATAACTTGA+AGG | + | chr7.2:11977433-11977452 | MS.gene061907:CDS | 20.0% |
!! | ATCCATATATAAAAGGTAAT+AGG | - | chr7.2:11975875-11975894 | None:intergenic | 20.0% |
!! | CATATATTAGAATCAAAGAT+TGG | + | chr7.2:11975213-11975232 | MS.gene061907:intron | 20.0% |
!! | TACACATAAACATGTTTAAT+CGG | + | chr7.2:11976282-11976301 | MS.gene061907:intron | 20.0% |
!! | TACACCTATTTATATTCAAA+TGG | - | chr7.2:11975995-11976014 | None:intergenic | 20.0% |
!! | TGAATTCATGTATAAAATGT+TGG | + | chr7.2:11977771-11977790 | MS.gene061907:intron | 20.0% |
!! | TGCTACTATTAAACAAAAAA+TGG | - | chr7.2:11975243-11975262 | None:intergenic | 20.0% |
!!! | AAATCATAAAACAAAGTGTT+GGG | - | chr7.2:11974901-11974920 | None:intergenic | 20.0% |
!!! | AAATTGTGTTGATAGTATAT+AGG | + | chr7.2:11976839-11976858 | MS.gene061907:intron | 20.0% |
!!! | AATTTGGAATCATTATTCAT+AGG | - | chr7.2:11977263-11977282 | None:intergenic | 20.0% |
!!! | AATTTTTTTGCACATGTTAA+AGG | - | chr7.2:11976250-11976269 | None:intergenic | 20.0% |
!!! | ATGTTTTTGTTTAATCTTTG+TGG | + | chr7.2:11974784-11974803 | MS.gene061907:intron | 20.0% |
!!! | ATTACAAGCGTTTTATTTTT+TGG | - | chr7.2:11975066-11975085 | None:intergenic | 20.0% |
!!! | ATTTTTAGCTAAAATAAGCT+AGG | - | chr7.2:11975546-11975565 | None:intergenic | 20.0% |
!!! | CTTTAGAACAAAAAATACTA+TGG | - | chr7.2:11975176-11975195 | None:intergenic | 20.0% |
!!! | GTCTTTTAATTAATGTTTCT+TGG | + | chr7.2:11977744-11977763 | MS.gene061907:intron | 20.0% |
!!! | TGTTTTTGTTTAATCTTTGT+GGG | + | chr7.2:11974785-11974804 | MS.gene061907:intron | 20.0% |
!!! | TTACAAGCGTTTTATTTTTT+GGG | - | chr7.2:11975065-11975084 | None:intergenic | 20.0% |
!!! | TTTCGGAGTAATTATTTTTT+TGG | + | chr7.2:11974993-11975012 | MS.gene061907:intron | 20.0% |
! | AAAGTCACCAAATGAAAATT+TGG | + | chr7.2:11975681-11975700 | MS.gene061907:CDS | 25.0% |
! | AATTGAATTAACTCTTGTGT+AGG | + | chr7.2:11975629-11975648 | MS.gene061907:intron | 25.0% |
! | ACCTATTTATATTCAAATGG+TGG | - | chr7.2:11975992-11976011 | None:intergenic | 25.0% |
! | ACTTCAAAAAATAGGTATGA+TGG | - | chr7.2:11975484-11975503 | None:intergenic | 25.0% |
! | ATAAAATACTACAGACAAAG+TGG | - | chr7.2:11975827-11975846 | None:intergenic | 25.0% |
! | ATATCTTAATGCTCTTACTT+AGG | - | chr7.2:11976219-11976238 | None:intergenic | 25.0% |
! | ATGTCCTATACTATTGTATA+TGG | + | chr7.2:11976909-11976928 | MS.gene061907:intron | 25.0% |
! | CAAATCATAAAACAAAGTGT+TGG | - | chr7.2:11974902-11974921 | None:intergenic | 25.0% |
! | CTTCAAAAAATAGGTATGAT+GGG | - | chr7.2:11975483-11975502 | None:intergenic | 25.0% |
! | GAATAGTGAATCCTTAATTT+CGG | + | chr7.2:11974946-11974965 | MS.gene061907:intron | 25.0% |
! | TACTAGAAAAAGATCAGTTA+AGG | + | chr7.2:11977459-11977478 | MS.gene061907:intron | 25.0% |
! | TGTCCTATACTATTGTATAT+GGG | + | chr7.2:11976910-11976929 | MS.gene061907:intron | 25.0% |
! | TTATAAAAATCATACCAAGC+AGG | - | chr7.2:11977620-11977639 | None:intergenic | 25.0% |
! | TTCATCAAGTATTTGTAAGT+AGG | - | chr7.2:11977545-11977564 | None:intergenic | 25.0% |
!! | CACATGTTACTTCAAAAAAT+AGG | - | chr7.2:11975492-11975511 | None:intergenic | 25.0% |
!! | CACCTATTACCTTTTATATA+TGG | + | chr7.2:11975870-11975889 | MS.gene061907:intron | 25.0% |
!! | GCAAATACTTTATGCAATTT+TGG | + | chr7.2:11976063-11976082 | MS.gene061907:intron | 25.0% |
!! | TTCAAGTCCAAATTTTCATT+TGG | - | chr7.2:11975691-11975710 | None:intergenic | 25.0% |
!!! | AAGAGCATTAAGATATTTGA+AGG | + | chr7.2:11976223-11976242 | MS.gene061907:intron | 25.0% |
!!! | AGAATTTGTGAATGGTTTTA+AGG | - | chr7.2:11977981-11978000 | None:intergenic | 25.0% |
!!! | AGTCAAAAAGTACTCTAATT+TGG | - | chr7.2:11976428-11976447 | None:intergenic | 25.0% |
!!! | ATTAGAGTACTTTTTGACTT+TGG | + | chr7.2:11976429-11976448 | MS.gene061907:intron | 25.0% |
!!! | CTATTTTTTGAAGTAACATG+TGG | + | chr7.2:11975490-11975509 | MS.gene061907:intron | 25.0% |
!!! | GAATTTGTGAATGGTTTTAA+GGG | - | chr7.2:11977980-11977999 | None:intergenic | 25.0% |
!!! | TTAGTTTTCTTCTTTGAGTT+TGG | + | chr7.2:11974752-11974771 | MS.gene061907:intron | 25.0% |
!!! | TTCATTGTTTGTTGTGTTTA+GGG | - | chr7.2:11976609-11976628 | None:intergenic | 25.0% |
!!! | TTTCATTGTTTGTTGTGTTT+AGG | - | chr7.2:11976610-11976629 | None:intergenic | 25.0% |
AAATTGTACCACTAAATGCT+GGG | + | chr7.2:11976522-11976541 | MS.gene061907:CDS | 30.0% | |
AATAGAGTCGAAAAAATCCA+AGG | + | chr7.2:11974518-11974537 | MS.gene061907:CDS | 30.0% | |
AATCAGAAAATGTACGTTAG+AGG | + | chr7.2:11977842-11977861 | MS.gene061907:CDS | 30.0% | |
AATGTAGCAGAATTTGTGAA+TGG | - | chr7.2:11977989-11978008 | None:intergenic | 30.0% | |
AATTTGTGTTGTATGCTAAC+AGG | + | chr7.2:11977065-11977084 | MS.gene061907:intron | 30.0% | |
ACACTTTCAATTGACTAACA+TGG | - | chr7.2:11976724-11976743 | None:intergenic | 30.0% | |
ACATGTGCAGTAACATTATT+TGG | + | chr7.2:11977357-11977376 | MS.gene061907:intron | 30.0% | |
ACTAACATGGTTTCGATAAT+CGG | - | chr7.2:11976711-11976730 | None:intergenic | 30.0% | |
AGAAAAAGATCAGTTAAGGA+TGG | + | chr7.2:11977463-11977482 | MS.gene061907:intron | 30.0% | |
ATGAATTTCATCGTAACTAG+CGG | - | chr7.2:11977408-11977427 | None:intergenic | 30.0% | |
ATGTGACACTTAATATGTGA+CGG | + | chr7.2:11977704-11977723 | MS.gene061907:intron | 30.0% | |
ATTTGTGTTGTATGCTAACA+GGG | + | chr7.2:11977066-11977085 | MS.gene061907:intron | 30.0% | |
CAATTCTTCACAGCTAATTT+CGG | - | chr7.2:11974647-11974666 | None:intergenic | 30.0% | |
CAGCTGACATATATGTTATT+GGG | + | chr7.2:11975734-11975753 | MS.gene061907:CDS | 30.0% | |
CATAATGTGAATATTCGCAA+TGG | - | chr7.2:11977674-11977693 | None:intergenic | 30.0% | |
CATTTAGTGGTACAATTTCT+TGG | - | chr7.2:11976520-11976539 | None:intergenic | 30.0% | |
GCCACCATTTGAATATAAAT+AGG | + | chr7.2:11975988-11976007 | MS.gene061907:intron | 30.0% | |
GTCCTATACTATTGTATATG+GGG | + | chr7.2:11976911-11976930 | MS.gene061907:intron | 30.0% | |
GTGCTAATTAAGCTTGTATT+TGG | + | chr7.2:11975030-11975049 | MS.gene061907:intron | 30.0% | |
TAAACTTGTGTTATCAAGCT+CGG | - | chr7.2:11976193-11976212 | None:intergenic | 30.0% | |
TATCATCTATGTCTCCTATT+TGG | + | chr7.2:11975794-11975813 | MS.gene061907:intron | 30.0% | |
TCCTATACTATTGTATATGG+GGG | + | chr7.2:11976912-11976931 | MS.gene061907:intron | 30.0% | |
TGCAGTAACATTATTTGGTT+GGG | + | chr7.2:11977362-11977381 | MS.gene061907:intron | 30.0% | |
TGTGATAGAATTCTATGGAA+AGG | + | chr7.2:11977809-11977828 | MS.gene061907:CDS | 30.0% | |
! | AACATCTGTCTTGATGATTA+TGG | + | chr7.2:11975938-11975957 | MS.gene061907:intron | 30.0% |
! | AATAACGAACCTTATTTCCA+AGG | - | chr7.2:11976775-11976794 | None:intergenic | 30.0% |
! | AATGTTGGTTGAAATGAAAC+AGG | + | chr7.2:11977786-11977805 | MS.gene061907:intron | 30.0% |
! | TATTGCTTCAGATTTTGCTA+TGG | + | chr7.2:11976962-11976981 | MS.gene061907:intron | 30.0% |
! | TCGTTATTAGTCAGACATTT+TGG | + | chr7.2:11976787-11976806 | MS.gene061907:intron | 30.0% |
! | TGATTATGGATTATCTACGA+CGG | + | chr7.2:11975952-11975971 | MS.gene061907:intron | 30.0% |
!! | GACATTTTGGTGATTATGAT+TGG | + | chr7.2:11976800-11976819 | MS.gene061907:intron | 30.0% |
!! | TTAGTCAATTGAAAGTGTCT+CGG | + | chr7.2:11976726-11976745 | MS.gene061907:CDS | 30.0% |
!!! | TAAAGCGTTGCTTTTGATTT+GGG | - | chr7.2:11976634-11976653 | None:intergenic | 30.0% |
AAACTTGTGTTATCAAGCTC+GGG | - | chr7.2:11976192-11976211 | None:intergenic | 35.0% | |
AAAGTGGTAGATAGCCAAAT+AGG | - | chr7.2:11975811-11975830 | None:intergenic | 35.0% | |
AAGGTAATAGGTGAACTAAG+TGG | - | chr7.2:11975863-11975882 | None:intergenic | 35.0% | |
AATGCTGGTCGAATATTTGA+AGG | + | chr7.2:11977491-11977510 | MS.gene061907:CDS | 35.0% | |
ACAGGTGTGATAGAATTCTA+TGG | + | chr7.2:11977804-11977823 | MS.gene061907:intron | 35.0% | |
ACCTCAGATTATTCTGTTAC+AGG | + | chr7.2:11974698-11974717 | MS.gene061907:CDS | 35.0% | |
ACCTGTAACAGAATAATCTG+AGG | - | chr7.2:11974702-11974721 | None:intergenic | 35.0% | |
AGAATTCTATGGAAAGGAGA+AGG | + | chr7.2:11977815-11977834 | MS.gene061907:CDS | 35.0% | |
AGTCAAAATTCTCTGACCAT+AGG | + | chr7.2:11977867-11977886 | MS.gene061907:CDS | 35.0% | |
AGTTTGAGCAACATATTGGT+CGG | - | chr7.2:11977570-11977589 | None:intergenic | 35.0% | |
ATATTTGAAGGTTGGAACGA+AGG | + | chr7.2:11977503-11977522 | MS.gene061907:CDS | 35.0% | |
CAGAAAAATTATCTGGTACG+AGG | - | chr7.2:11974870-11974889 | None:intergenic | 35.0% | |
CAGTAACATTATTTGGTTGG+GGG | + | chr7.2:11977364-11977383 | MS.gene061907:intron | 35.0% | |
CCAATAACATATATGTCAGC+TGG | - | chr7.2:11975736-11975755 | None:intergenic | 35.0% | |
CCAGCTGACATATATGTTAT+TGG | + | chr7.2:11975733-11975752 | MS.gene061907:CDS | 35.0% | |
CCTATACTATTGTATATGGG+GGG | + | chr7.2:11976913-11976932 | MS.gene061907:intron | 35.0% | |
CGAAATTAGCTGTGAAGAAT+TGG | + | chr7.2:11974645-11974664 | MS.gene061907:CDS | 35.0% | |
GAAATTGTACCACTAAATGC+TGG | + | chr7.2:11976521-11976540 | MS.gene061907:CDS | 35.0% | |
GCAGTAACATTATTTGGTTG+GGG | + | chr7.2:11977363-11977382 | MS.gene061907:intron | 35.0% | |
GTGACATTTCAAGATGAAGT+AGG | + | chr7.2:11976989-11977008 | MS.gene061907:intron | 35.0% | |
GTGCAGTAACATTATTTGGT+TGG | + | chr7.2:11977361-11977380 | MS.gene061907:intron | 35.0% | |
TGCAAGTTTGAGCAACATAT+TGG | - | chr7.2:11977574-11977593 | None:intergenic | 35.0% | |
TGCTCAAACTTGCAAATCAA+AGG | + | chr7.2:11977580-11977599 | MS.gene061907:CDS | 35.0% | |
! | ACTAAATTTTCTCACTCCCT+TGG | + | chr7.2:11977216-11977235 | MS.gene061907:CDS | 35.0% |
! | AGAGGATTAGTGATGAATGA+AGG | - | chr7.2:11975442-11975461 | None:intergenic | 35.0% |
! | CTCGTACCAGATAATTTTTC+TGG | + | chr7.2:11974868-11974887 | MS.gene061907:CDS | 35.0% |
! | GTTTAGGGCTTGATGAATAA+GGG | - | chr7.2:11976594-11976613 | None:intergenic | 35.0% |
! | TATGCTTGGATCTAGTGTTT+TGG | + | chr7.2:11974970-11974989 | MS.gene061907:intron | 35.0% |
! | TGGTTGAAGCATTCTACAAA+TGG | + | chr7.2:11975385-11975404 | MS.gene061907:CDS | 35.0% |
! | TGTTTAGGGCTTGATGAATA+AGG | - | chr7.2:11976595-11976614 | None:intergenic | 35.0% |
! | TTAATTTTGTGCTGCAGTCA+TGG | + | chr7.2:11974621-11974640 | MS.gene061907:intron | 35.0% |
!! | TAGTCAATTGAAAGTGTCTC+GGG | + | chr7.2:11976727-11976746 | MS.gene061907:CDS | 35.0% |
!!! | AGAGTACTTTTTGACTTTGG+AGG | + | chr7.2:11976432-11976451 | MS.gene061907:intron | 35.0% |
!!! | CTAAAGCGTTGCTTTTGATT+TGG | - | chr7.2:11976635-11976654 | None:intergenic | 35.0% |
!!! | GTTTTAAGGGACAAGATCTT+GGG | - | chr7.2:11977967-11977986 | None:intergenic | 35.0% |
!!! | TGGATCTAGTGTTTTGGTTT+CGG | + | chr7.2:11974976-11974995 | MS.gene061907:intron | 35.0% |
!!! | TGGTCCTTGTTTTCAAAGAA+GGG | + | chr7.2:11975362-11975381 | MS.gene061907:intron | 35.0% |
!!! | TTGGTCCTTGTTTTCAAAGA+AGG | + | chr7.2:11975361-11975380 | MS.gene061907:intron | 35.0% |
AAACGAAGCAGAATGTGGTT+TGG | - | chr7.2:11977119-11977138 | None:intergenic | 40.0% | |
ACTCATGTTCTAGTATGCCA+AGG | - | chr7.2:11977236-11977255 | None:intergenic | 40.0% | |
ACTCTTGTGTAGGATGTTTG+TGG | + | chr7.2:11975639-11975658 | MS.gene061907:intron | 40.0% | |
AGCATTTACCTAAGGTTGAG+AGG | - | chr7.2:11975460-11975479 | None:intergenic | 40.0% | |
CCCCCCATATACAATAGTAT+AGG | - | chr7.2:11976916-11976935 | None:intergenic | 40.0% | |
CTCATGTTCTAGTATGCCAA+GGG | - | chr7.2:11977235-11977254 | None:intergenic | 40.0% | |
CTCTTGTGTAGGATGTTTGT+GGG | + | chr7.2:11975640-11975659 | MS.gene061907:intron | 40.0% | |
CTGGTCGAATATTTGAAGGT+TGG | + | chr7.2:11977495-11977514 | MS.gene061907:CDS | 40.0% | |
GATGAAGTAGGACTATGTAC+TGG | + | chr7.2:11977001-11977020 | MS.gene061907:intron | 40.0% | |
GCTGTGAATAGAGAATACAC+TGG | - | chr7.2:11977893-11977912 | None:intergenic | 40.0% | |
TACAAATGGCGTGAAACGTT+CGG | + | chr7.2:11975399-11975418 | MS.gene061907:CDS | 40.0% | |
TCACTAATCCTCTCAACCTT+AGG | + | chr7.2:11975449-11975468 | MS.gene061907:CDS | 40.0% | |
TCCAAGCATAGCCGAAATTA+AGG | - | chr7.2:11974960-11974979 | None:intergenic | 40.0% | |
TCCTTAATTTCGGCTATGCT+TGG | + | chr7.2:11974956-11974975 | MS.gene061907:intron | 40.0% | |
TCTTGTGTAGGATGTTTGTG+GGG | + | chr7.2:11975641-11975660 | MS.gene061907:intron | 40.0% | |
! | AACTCGTGTTACTAGCAACA+AGG | + | chr7.2:11978053-11978072 | MS.gene061907:CDS | 40.0% |
! | ACCACCCTTCTTTGAAAACA+AGG | - | chr7.2:11975369-11975388 | None:intergenic | 40.0% |
! | ATAGAGAATACACTGGCCTA+TGG | - | chr7.2:11977886-11977905 | None:intergenic | 40.0% |
! | TGGCTTGTCTTTGATCTCTT+AGG | + | chr7.2:11976492-11976511 | MS.gene061907:intron | 40.0% |
! | TGGTATTTTCTTGTGCGTGT+GGG | + | chr7.2:11976679-11976698 | MS.gene061907:CDS | 40.0% |
! | TTGGTATTTTCTTGTGCGTG+TGG | + | chr7.2:11976678-11976697 | MS.gene061907:CDS | 40.0% |
!! | ATGATGGGAGCATTTACCTA+AGG | - | chr7.2:11975468-11975487 | None:intergenic | 40.0% |
!!! | GGTTTTAAGGGACAAGATCT+TGG | - | chr7.2:11977968-11977987 | None:intergenic | 40.0% |
!!! | TCCTTGTTTTCAAAGAAGGG+TGG | + | chr7.2:11975365-11975384 | MS.gene061907:intron | 40.0% |
AATCTTTGTGGGACTCACTC+AGG | + | chr7.2:11974796-11974815 | MS.gene061907:intron | 45.0% | |
AGTGCAAACGAAGCAGAATG+TGG | - | chr7.2:11977124-11977143 | None:intergenic | 45.0% | |
ATCTTTGTGGGACTCACTCA+GGG | + | chr7.2:11974797-11974816 | MS.gene061907:intron | 45.0% | |
GCAAGAGAATGTGCATACCT+TGG | - | chr7.2:11974538-11974557 | None:intergenic | 45.0% | |
GTACGAGGATGTAGCTATCT+TGG | - | chr7.2:11974855-11974874 | None:intergenic | 45.0% | |
GTAGCAAGCAAGCAAATGGT+TGG | + | chr7.2:11976659-11976678 | MS.gene061907:CDS | 45.0% | |
GTATATGGGGGGCTATAAAG+TGG | + | chr7.2:11976924-11976943 | MS.gene061907:intron | 45.0% | |
TAAATGCTGGGAACGTGCTT+GGG | + | chr7.2:11976534-11976553 | MS.gene061907:CDS | 45.0% | |
TCAAAAGCAACGCTTTAGCC+TGG | + | chr7.2:11976637-11976656 | MS.gene061907:CDS | 45.0% | |
TTAAGGATGGAGCAGAATGC+TGG | + | chr7.2:11977476-11977495 | MS.gene061907:intron | 45.0% | |
! | CATGGGCTACCTTGGAAATA+AGG | + | chr7.2:11976763-11976782 | MS.gene061907:CDS | 45.0% |
!! | CAATTGAAAGTGTCTCGGGT+TGG | + | chr7.2:11976731-11976750 | MS.gene061907:CDS | 45.0% |
!!! | ATATTATTAACTTAAATTTT+AGG | - | chr7.2:11975520-11975539 | None:intergenic | 5.0% |
AAAAACGACGCACTCCTGCT+TGG | + | chr7.2:11977603-11977622 | MS.gene061907:CDS | 50.0% | |
AGCACGTTCCCAGCATTTAG+TGG | - | chr7.2:11976533-11976552 | None:intergenic | 50.0% | |
CCTGGTAGCAAGCAAGCAAA+TGG | + | chr7.2:11976655-11976674 | MS.gene061907:CDS | 50.0% | |
CTAAATGCTGGGAACGTGCT+TGG | + | chr7.2:11976533-11976552 | MS.gene061907:CDS | 50.0% | |
CTCGTCACCACATTTCTCTC+CGG | - | chr7.2:11977157-11977176 | None:intergenic | 50.0% | |
CTGCTTCGTTTGCACTCACT+TGG | + | chr7.2:11977128-11977147 | MS.gene061907:CDS | 50.0% | |
GCTGCAGCACAACAAGTAGA+TGG | - | chr7.2:11978013-11978032 | None:intergenic | 50.0% | |
GGGACAAGATCTTGGGATAG+TGG | - | chr7.2:11977960-11977979 | None:intergenic | 50.0% | |
TGACGAGTTGCGTCGAAACT+TGG | + | chr7.2:11977170-11977189 | MS.gene061907:CDS | 50.0% | |
TTGTGGGGACGTGGAATGTA+GGG | + | chr7.2:11975656-11975675 | MS.gene061907:CDS | 50.0% | |
TTTGTGGGGACGTGGAATGT+AGG | + | chr7.2:11975655-11975674 | MS.gene061907:CDS | 50.0% | |
! | CCATTTGCTTGCTTGCTACC+AGG | - | chr7.2:11976658-11976677 | None:intergenic | 50.0% |
!! | GGACTATGTACTGGCTACAG+TGG | + | chr7.2:11977010-11977029 | MS.gene061907:intron | 50.0% |
GCGTCGAAACTTGGACATCG+CGG | + | chr7.2:11977179-11977198 | MS.gene061907:CDS | 55.0% | |
GTAGGATGTTTGTGGGGACG+TGG | + | chr7.2:11975647-11975666 | MS.gene061907:intron | 55.0% | |
GTCACCACATTTCTCTCCGG+AGG | - | chr7.2:11977154-11977173 | None:intergenic | 55.0% | |
GTGCTTGGGTCTGAGAACAG+TGG | + | chr7.2:11976548-11976567 | MS.gene061907:CDS | 55.0% | |
GTTTGCACTCACTTGGCCTC+CGG | + | chr7.2:11977135-11977154 | MS.gene061907:CDS | 55.0% | |
TCCAAGGTAGCCCATGATGC+CGG | - | chr7.2:11976759-11976778 | None:intergenic | 55.0% | |
TGTGGGGACGTGGAATGTAG+GGG | + | chr7.2:11975657-11975676 | MS.gene061907:CDS | 55.0% | |
TTGGCCTCCGGAGAGAAATG+TGG | + | chr7.2:11977147-11977166 | MS.gene061907:CDS | 55.0% | |
!! | AAAGTGTCTCGGGTTGGCAC+CGG | + | chr7.2:11976737-11976756 | MS.gene061907:CDS | 55.0% |
!! | AAGGGCTAGCCACTTTGCTG+CGG | - | chr7.2:11976576-11976595 | None:intergenic | 55.0% |
GTGGGGACGTGGAATGTAGG+GGG | + | chr7.2:11975658-11975677 | MS.gene061907:CDS | 60.0% | |
! | ACCGGCATCATGGGCTACCT+TGG | + | chr7.2:11976755-11976774 | MS.gene061907:CDS | 60.0% |
!! | AGGGCTAGCCACTTTGCTGC+GGG | - | chr7.2:11976575-11976594 | None:intergenic | 60.0% |
!! | GGCGTGAAACGTTCGGTGCA+TGG | + | chr7.2:11975406-11975425 | MS.gene061907:CDS | 60.0% |
ACAGTGGCCCCGCAGCAAAG+TGG | + | chr7.2:11976564-11976583 | MS.gene061907:CDS | 65.0% | |
!! | CGGGTTGGCACCGGCATCAT+GGG | + | chr7.2:11976746-11976765 | MS.gene061907:CDS | 65.0% |
!! | GGGCTAGCCACTTTGCTGCG+GGG | - | chr7.2:11976574-11976593 | None:intergenic | 65.0% |
!! | TCGGGTTGGCACCGGCATCA+TGG | + | chr7.2:11976745-11976764 | MS.gene061907:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 11974513 | 11978114 | 11974513 | ID=MS.gene061907 |
chr7.2 | mRNA | 11974513 | 11978114 | 11974513 | ID=MS.gene061907.t1;Parent=MS.gene061907 |
chr7.2 | exon | 11974513 | 11974539 | 11974513 | ID=MS.gene061907.t1.exon1;Parent=MS.gene061907.t1 |
chr7.2 | CDS | 11974513 | 11974539 | 11974513 | ID=cds.MS.gene061907.t1;Parent=MS.gene061907.t1 |
chr7.2 | exon | 11974638 | 11974719 | 11974638 | ID=MS.gene061907.t1.exon2;Parent=MS.gene061907.t1 |
chr7.2 | CDS | 11974638 | 11974719 | 11974638 | ID=cds.MS.gene061907.t1;Parent=MS.gene061907.t1 |
chr7.2 | exon | 11974818 | 11974889 | 11974818 | ID=MS.gene061907.t1.exon3;Parent=MS.gene061907.t1 |
chr7.2 | CDS | 11974818 | 11974889 | 11974818 | ID=cds.MS.gene061907.t1;Parent=MS.gene061907.t1 |
chr7.2 | exon | 11975380 | 11975470 | 11975380 | ID=MS.gene061907.t1.exon4;Parent=MS.gene061907.t1 |
chr7.2 | CDS | 11975380 | 11975470 | 11975380 | ID=cds.MS.gene061907.t1;Parent=MS.gene061907.t1 |
chr7.2 | exon | 11975651 | 11975755 | 11975651 | ID=MS.gene061907.t1.exon5;Parent=MS.gene061907.t1 |
chr7.2 | CDS | 11975651 | 11975755 | 11975651 | ID=cds.MS.gene061907.t1;Parent=MS.gene061907.t1 |
chr7.2 | exon | 11976514 | 11976784 | 11976514 | ID=MS.gene061907.t1.exon6;Parent=MS.gene061907.t1 |
chr7.2 | CDS | 11976514 | 11976784 | 11976514 | ID=cds.MS.gene061907.t1;Parent=MS.gene061907.t1 |
chr7.2 | exon | 11977087 | 11977253 | 11977087 | ID=MS.gene061907.t1.exon7;Parent=MS.gene061907.t1 |
chr7.2 | CDS | 11977087 | 11977253 | 11977087 | ID=cds.MS.gene061907.t1;Parent=MS.gene061907.t1 |
chr7.2 | exon | 11977367 | 11977454 | 11977367 | ID=MS.gene061907.t1.exon8;Parent=MS.gene061907.t1 |
chr7.2 | CDS | 11977367 | 11977454 | 11977367 | ID=cds.MS.gene061907.t1;Parent=MS.gene061907.t1 |
chr7.2 | exon | 11977488 | 11977624 | 11977488 | ID=MS.gene061907.t1.exon9;Parent=MS.gene061907.t1 |
chr7.2 | CDS | 11977488 | 11977624 | 11977488 | ID=cds.MS.gene061907.t1;Parent=MS.gene061907.t1 |
chr7.2 | exon | 11977808 | 11978114 | 11977808 | ID=MS.gene061907.t1.exon10;Parent=MS.gene061907.t1 |
chr7.2 | CDS | 11977808 | 11978114 | 11977808 | ID=cds.MS.gene061907.t1;Parent=MS.gene061907.t1 |
Gene Sequence |
Protein sequence |