Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018546.t1 | XP_003625521.1 | 95 | 459 | 12 | 1 | 1 | 448 | 41 | 499 | 2.20E-253 | 884.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018546.t1 | Q0WT19 | 54.4 | 489 | 158 | 12 | 6 | 448 | 6 | 475 | 6.5e-137 | 488.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018546.t1 | G7L0M4 | 95.0 | 459 | 12 | 1 | 1 | 448 | 41 | 499 | 1.6e-253 | 884.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene018546 | MS.gene023268 | PPI |
MS.gene018546 | MS.gene29230 | PPI |
MS.gene018546 | MS.gene028184 | PPI |
MS.gene08351 | MS.gene018546 | PPI |
MS.gene018546 | MS.gene34965 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018546.t1 | MTR_7g100070 | 94.989 | 459 | 12 | 1 | 1 | 448 | 1 | 459 | 0.0 | 905 |
MS.gene018546.t1 | MTR_7g100070 | 94.989 | 459 | 12 | 1 | 1 | 448 | 41 | 499 | 0.0 | 904 |
MS.gene018546.t1 | MTR_7g100070 | 94.771 | 459 | 12 | 2 | 1 | 448 | 1 | 458 | 0.0 | 899 |
MS.gene018546.t1 | MTR_7g095260 | 57.364 | 258 | 90 | 4 | 160 | 397 | 224 | 481 | 1.68e-96 | 299 |
MS.gene018546.t1 | MTR_7g095260 | 63.158 | 76 | 28 | 0 | 84 | 159 | 34 | 109 | 8.93e-24 | 103 |
MS.gene018546.t1 | MTR_7g095260 | 57.364 | 258 | 90 | 4 | 160 | 397 | 276 | 533 | 5.03e-96 | 300 |
MS.gene018546.t1 | MTR_7g095260 | 43.949 | 157 | 73 | 4 | 10 | 159 | 13 | 161 | 2.52e-29 | 120 |
MS.gene018546.t1 | MTR_1g038810 | 41.026 | 429 | 177 | 11 | 11 | 388 | 10 | 413 | 2.17e-95 | 295 |
MS.gene018546.t1 | MTR_5g006820 | 53.546 | 282 | 89 | 4 | 169 | 430 | 351 | 610 | 2.50e-95 | 300 |
MS.gene018546.t1 | MTR_5g006820 | 63.636 | 77 | 28 | 0 | 84 | 160 | 88 | 164 | 3.86e-26 | 111 |
MS.gene018546.t1 | MTR_6g072010 | 44.767 | 344 | 144 | 9 | 91 | 390 | 47 | 388 | 2.33e-94 | 290 |
MS.gene018546.t1 | MTR_6g072010 | 44.767 | 344 | 144 | 9 | 91 | 390 | 58 | 399 | 3.71e-94 | 290 |
MS.gene018546.t1 | MTR_1g038810 | 45.930 | 344 | 135 | 7 | 96 | 388 | 66 | 409 | 6.95e-93 | 288 |
MS.gene018546.t1 | MTR_1g103330 | 55.094 | 265 | 98 | 4 | 157 | 401 | 301 | 564 | 1.25e-92 | 291 |
MS.gene018546.t1 | MTR_1g103330 | 43.396 | 159 | 83 | 4 | 5 | 159 | 6 | 161 | 6.86e-28 | 116 |
MS.gene018546.t1 | MTR_1g071680 | 55.039 | 258 | 96 | 4 | 153 | 390 | 269 | 526 | 1.02e-91 | 288 |
MS.gene018546.t1 | MTR_1g071680 | 42.529 | 174 | 86 | 4 | 6 | 167 | 7 | 178 | 5.98e-33 | 131 |
MS.gene018546.t1 | MTR_6g009260 | 41.979 | 374 | 166 | 8 | 76 | 400 | 44 | 415 | 5.71e-89 | 278 |
MS.gene018546.t1 | MTR_8g091360 | 52.290 | 262 | 101 | 4 | 164 | 401 | 305 | 566 | 1.43e-88 | 281 |
MS.gene018546.t1 | MTR_8g091360 | 68.056 | 72 | 23 | 0 | 89 | 160 | 140 | 211 | 1.52e-24 | 106 |
MS.gene018546.t1 | MTR_8g043480 | 50.000 | 254 | 106 | 3 | 165 | 397 | 38 | 291 | 4.42e-83 | 258 |
MS.gene018546.t1 | MTR_8g043480 | 50.000 | 254 | 106 | 3 | 165 | 397 | 168 | 421 | 1.83e-81 | 258 |
MS.gene018546.t1 | MTR_8g043480 | 61.972 | 71 | 27 | 0 | 89 | 159 | 9 | 79 | 2.03e-21 | 96.7 |
MS.gene018546.t1 | MTR_8g043480 | 50.000 | 254 | 106 | 3 | 165 | 397 | 233 | 486 | 7.49e-81 | 259 |
MS.gene018546.t1 | MTR_8g043480 | 61.972 | 71 | 27 | 0 | 89 | 159 | 74 | 144 | 2.24e-21 | 97.1 |
MS.gene018546.t1 | MTR_5g014090 | 47.909 | 263 | 118 | 4 | 152 | 395 | 345 | 607 | 1.33e-75 | 248 |
MS.gene018546.t1 | MTR_5g014090 | 33.149 | 181 | 104 | 4 | 6 | 171 | 7 | 185 | 3.89e-25 | 108 |
MS.gene018546.t1 | MTR_1g097690 | 49.174 | 242 | 102 | 5 | 175 | 398 | 354 | 592 | 5.39e-74 | 244 |
MS.gene018546.t1 | MTR_1g097690 | 43.269 | 104 | 57 | 2 | 70 | 173 | 83 | 184 | 5.70e-19 | 90.1 |
MS.gene018546.t1 | MTR_4g098850 | 44.369 | 293 | 131 | 7 | 128 | 394 | 544 | 830 | 1.90e-71 | 241 |
MS.gene018546.t1 | MTR_4g098850 | 45.685 | 197 | 89 | 4 | 216 | 394 | 2 | 198 | 4.78e-50 | 182 |
MS.gene018546.t1 | MTR_4g098850 | 35.484 | 155 | 79 | 4 | 11 | 162 | 290 | 426 | 1.26e-22 | 101 |
MS.gene018546.t1 | MTR_6g042240 | 47.581 | 248 | 111 | 5 | 168 | 398 | 325 | 570 | 4.27e-70 | 233 |
MS.gene018546.t1 | MTR_6g042240 | 58.108 | 74 | 31 | 0 | 86 | 159 | 54 | 127 | 1.50e-21 | 97.8 |
MS.gene018546.t1 | MTR_6g042240 | 47.390 | 249 | 110 | 5 | 168 | 398 | 365 | 610 | 1.44e-69 | 232 |
MS.gene018546.t1 | MTR_6g042240 | 58.108 | 74 | 31 | 0 | 86 | 159 | 94 | 167 | 1.62e-21 | 97.8 |
MS.gene018546.t1 | MTR_6g042240 | 47.390 | 249 | 110 | 5 | 168 | 398 | 378 | 623 | 3.22e-69 | 231 |
MS.gene018546.t1 | MTR_6g042240 | 58.108 | 74 | 31 | 0 | 86 | 159 | 107 | 180 | 1.64e-21 | 97.8 |
MS.gene018546.t1 | MTR_8g091360 | 53.741 | 147 | 57 | 2 | 164 | 299 | 305 | 451 | 3.27e-45 | 164 |
MS.gene018546.t1 | MTR_8g091360 | 68.056 | 72 | 23 | 0 | 89 | 160 | 140 | 211 | 1.20e-24 | 106 |
MS.gene018546.t1 | MTR_1g097690 | 55.469 | 128 | 49 | 2 | 175 | 295 | 354 | 480 | 1.25e-43 | 160 |
MS.gene018546.t1 | MTR_1g097690 | 43.269 | 104 | 57 | 2 | 70 | 173 | 83 | 184 | 3.66e-19 | 90.1 |
MS.gene018546.t1 | MTR_5g014090 | 40.594 | 202 | 90 | 4 | 152 | 345 | 345 | 524 | 2.36e-39 | 149 |
MS.gene018546.t1 | MTR_5g014090 | 33.143 | 175 | 101 | 3 | 11 | 171 | 13 | 185 | 2.06e-25 | 108 |
MS.gene018546.t1 | MTR_1g078100 | 26.625 | 477 | 228 | 18 | 62 | 435 | 188 | 645 | 9.97e-34 | 134 |
MS.gene018546.t1 | MTR_1g078100 | 26.625 | 477 | 228 | 18 | 62 | 435 | 199 | 656 | 1.13e-33 | 134 |
MS.gene018546.t1 | MTR_1g078100 | 26.625 | 477 | 228 | 18 | 62 | 435 | 468 | 925 | 1.40e-33 | 134 |
MS.gene018546.t1 | MTR_6g092670 | 27.200 | 375 | 185 | 13 | 90 | 393 | 562 | 919 | 2.50e-29 | 122 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018546.t1 | AT2G37440 | 55.010 | 489 | 155 | 13 | 6 | 448 | 6 | 475 | 2.24e-175 | 500 |
MS.gene018546.t1 | AT2G37440 | 55.010 | 489 | 155 | 13 | 6 | 448 | 6 | 475 | 2.24e-175 | 500 |
MS.gene018546.t1 | AT2G37440 | 57.882 | 406 | 110 | 10 | 92 | 448 | 1 | 394 | 1.27e-152 | 439 |
MS.gene018546.t1 | AT2G01900 | 46.866 | 335 | 148 | 6 | 85 | 389 | 53 | 387 | 1.85e-97 | 299 |
MS.gene018546.t1 | AT2G01900 | 46.866 | 335 | 148 | 6 | 85 | 389 | 61 | 395 | 2.78e-97 | 298 |
MS.gene018546.t1 | AT2G01900 | 47.239 | 326 | 151 | 5 | 85 | 389 | 53 | 378 | 2.84e-97 | 298 |
MS.gene018546.t1 | AT2G32010 | 54.074 | 270 | 104 | 3 | 152 | 401 | 306 | 575 | 8.00e-95 | 298 |
MS.gene018546.t1 | AT2G32010 | 44.595 | 148 | 73 | 5 | 16 | 159 | 18 | 160 | 1.76e-28 | 118 |
MS.gene018546.t1 | AT2G32010 | 54.074 | 270 | 104 | 3 | 152 | 401 | 306 | 575 | 8.00e-95 | 298 |
MS.gene018546.t1 | AT2G32010 | 44.595 | 148 | 73 | 5 | 16 | 159 | 18 | 160 | 1.76e-28 | 118 |
MS.gene018546.t1 | AT2G32010 | 54.074 | 270 | 104 | 3 | 152 | 401 | 306 | 575 | 8.00e-95 | 298 |
MS.gene018546.t1 | AT2G32010 | 44.595 | 148 | 73 | 5 | 16 | 159 | 18 | 160 | 1.76e-28 | 118 |
MS.gene018546.t1 | AT2G32010 | 54.074 | 270 | 104 | 3 | 152 | 401 | 306 | 575 | 8.00e-95 | 298 |
MS.gene018546.t1 | AT2G32010 | 44.595 | 148 | 73 | 5 | 16 | 159 | 18 | 160 | 1.76e-28 | 118 |
MS.gene018546.t1 | AT1G05470 | 51.020 | 294 | 102 | 4 | 157 | 430 | 334 | 605 | 1.45e-94 | 298 |
MS.gene018546.t1 | AT1G05470 | 41.566 | 166 | 85 | 4 | 1 | 159 | 1 | 161 | 3.47e-29 | 120 |
MS.gene018546.t1 | AT1G05470 | 51.020 | 294 | 102 | 4 | 157 | 430 | 334 | 605 | 1.45e-94 | 298 |
MS.gene018546.t1 | AT1G05470 | 41.566 | 166 | 85 | 4 | 1 | 159 | 1 | 161 | 3.47e-29 | 120 |
MS.gene018546.t1 | AT5G65090 | 54.400 | 250 | 93 | 4 | 164 | 393 | 192 | 440 | 1.41e-91 | 285 |
MS.gene018546.t1 | AT5G65090 | 60.000 | 75 | 30 | 0 | 90 | 164 | 10 | 84 | 7.00e-23 | 101 |
MS.gene018546.t1 | AT5G65090 | 54.400 | 250 | 93 | 4 | 164 | 393 | 255 | 503 | 1.13e-90 | 285 |
MS.gene018546.t1 | AT5G65090 | 60.000 | 75 | 30 | 0 | 90 | 164 | 73 | 147 | 1.31e-22 | 100 |
MS.gene018546.t1 | AT5G65090 | 54.400 | 250 | 93 | 4 | 164 | 393 | 255 | 503 | 1.13e-90 | 285 |
MS.gene018546.t1 | AT5G65090 | 60.000 | 75 | 30 | 0 | 90 | 164 | 73 | 147 | 1.31e-22 | 100 |
MS.gene018546.t1 | AT3G63240 | 54.000 | 250 | 95 | 2 | 168 | 397 | 274 | 523 | 1.57e-88 | 280 |
MS.gene018546.t1 | AT3G63240 | 44.937 | 158 | 78 | 5 | 6 | 160 | 7 | 158 | 9.06e-30 | 122 |
MS.gene018546.t1 | AT3G63240 | 54.000 | 250 | 95 | 2 | 168 | 397 | 274 | 523 | 1.57e-88 | 280 |
MS.gene018546.t1 | AT3G63240 | 44.937 | 158 | 78 | 5 | 6 | 160 | 7 | 158 | 9.06e-30 | 122 |
MS.gene018546.t1 | AT5G04980 | 54.852 | 237 | 86 | 3 | 171 | 386 | 156 | 392 | 4.26e-87 | 271 |
MS.gene018546.t1 | AT5G04980 | 54.852 | 237 | 86 | 3 | 171 | 386 | 191 | 427 | 2.02e-86 | 271 |
MS.gene018546.t1 | AT5G04980 | 63.235 | 68 | 25 | 0 | 89 | 156 | 8 | 75 | 2.23e-19 | 90.5 |
MS.gene018546.t1 | AT5G04980 | 54.852 | 237 | 86 | 3 | 171 | 386 | 191 | 427 | 2.02e-86 | 271 |
MS.gene018546.t1 | AT5G04980 | 63.235 | 68 | 25 | 0 | 89 | 156 | 8 | 75 | 2.23e-19 | 90.5 |
MS.gene018546.t1 | AT5G04980 | 54.852 | 237 | 86 | 3 | 171 | 386 | 220 | 456 | 2.63e-86 | 271 |
MS.gene018546.t1 | AT5G04980 | 63.235 | 68 | 25 | 0 | 89 | 156 | 37 | 104 | 2.39e-19 | 90.5 |
MS.gene018546.t1 | AT1G34120 | 48.319 | 238 | 102 | 4 | 168 | 386 | 178 | 413 | 2.33e-74 | 240 |
MS.gene018546.t1 | AT4G18010 | 49.145 | 234 | 102 | 3 | 170 | 386 | 387 | 620 | 1.24e-73 | 243 |
MS.gene018546.t1 | AT4G18010 | 33.889 | 180 | 96 | 6 | 6 | 164 | 8 | 185 | 1.89e-23 | 103 |
MS.gene018546.t1 | AT1G34120 | 48.319 | 238 | 102 | 4 | 168 | 386 | 329 | 564 | 1.45e-72 | 239 |
MS.gene018546.t1 | AT1G34120 | 57.143 | 70 | 30 | 0 | 90 | 159 | 101 | 170 | 1.55e-20 | 94.7 |
MS.gene018546.t1 | AT1G34120 | 48.319 | 238 | 102 | 4 | 168 | 386 | 333 | 568 | 2.13e-72 | 239 |
MS.gene018546.t1 | AT1G34120 | 57.143 | 70 | 30 | 0 | 90 | 159 | 105 | 174 | 1.76e-20 | 94.7 |
MS.gene018546.t1 | AT1G34120 | 48.319 | 238 | 101 | 5 | 168 | 386 | 333 | 567 | 9.67e-71 | 234 |
MS.gene018546.t1 | AT1G34120 | 57.143 | 70 | 30 | 0 | 90 | 159 | 105 | 174 | 1.74e-20 | 94.7 |
MS.gene018546.t1 | AT1G71710 | 42.456 | 285 | 131 | 8 | 135 | 398 | 369 | 641 | 1.23e-67 | 228 |
MS.gene018546.t1 | AT1G71710 | 54.321 | 81 | 36 | 1 | 79 | 159 | 109 | 188 | 5.92e-22 | 99.4 |
MS.gene018546.t1 | AT1G71710 | 42.456 | 285 | 131 | 8 | 135 | 398 | 378 | 650 | 1.38e-67 | 228 |
MS.gene018546.t1 | AT1G71710 | 54.321 | 81 | 36 | 1 | 79 | 159 | 118 | 197 | 7.33e-22 | 99.0 |
MS.gene018546.t1 | AT4G18010 | 48.205 | 195 | 84 | 3 | 170 | 347 | 387 | 581 | 7.68e-57 | 197 |
MS.gene018546.t1 | AT4G18010 | 32.778 | 180 | 98 | 4 | 6 | 164 | 8 | 185 | 1.95e-23 | 103 |
MS.gene018546.t1 | AT1G34120 | 54.412 | 136 | 54 | 2 | 168 | 295 | 329 | 464 | 2.31e-43 | 159 |
MS.gene018546.t1 | AT1G34120 | 57.143 | 70 | 30 | 0 | 90 | 159 | 101 | 170 | 9.70e-21 | 94.7 |
MS.gene018546.t1 | AT1G65580 | 26.591 | 440 | 200 | 16 | 58 | 393 | 209 | 629 | 3.09e-37 | 145 |
MS.gene018546.t1 | AT1G65580 | 26.591 | 440 | 200 | 16 | 58 | 393 | 475 | 895 | 4.11e-37 | 145 |
MS.gene018546.t1 | AT1G05630 | 27.233 | 459 | 246 | 16 | 62 | 447 | 541 | 984 | 8.80e-36 | 141 |
MS.gene018546.t1 | AT1G05630 | 28.940 | 349 | 177 | 13 | 62 | 354 | 541 | 874 | 1.67e-33 | 134 |
MS.gene018546.t1 | AT2G43900 | 24.890 | 454 | 251 | 16 | 69 | 448 | 556 | 993 | 4.28e-33 | 133 |
MS.gene018546.t1 | AT2G43900 | 24.890 | 454 | 251 | 16 | 69 | 448 | 556 | 993 | 4.57e-33 | 133 |
MS.gene018546.t1 | AT2G31830 | 28.312 | 385 | 188 | 14 | 89 | 402 | 579 | 946 | 1.13e-32 | 132 |
MS.gene018546.t1 | AT2G31830 | 28.312 | 385 | 188 | 14 | 89 | 402 | 579 | 946 | 1.19e-32 | 132 |
MS.gene018546.t1 | AT2G31830 | 29.467 | 319 | 158 | 11 | 89 | 354 | 579 | 883 | 1.72e-31 | 128 |
MS.gene018546.t1 | AT1G05630 | 31.308 | 214 | 122 | 8 | 62 | 263 | 541 | 741 | 5.76e-21 | 96.7 |
MS.gene018546.t1 | AT1G47510 | 26.923 | 312 | 163 | 13 | 89 | 376 | 53 | 323 | 7.02e-17 | 82.0 |
MS.gene018546.t1 | AT1G47510 | 31.373 | 204 | 102 | 10 | 197 | 376 | 72 | 261 | 1.95e-15 | 76.6 |
Find 92 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCATTGTTTGTTGTGTTTA+GGG | 0.163432 | 7.4:-10218348 | None:intergenic |
CCAGCTGACATATATGTTAT+TGG | 0.170567 | 7.4:+10217474 | MS.gene018546:CDS |
ACCTCAGATTATTCTGTTAC+AGG | 0.227155 | 7.4:+10216433 | MS.gene018546:CDS |
TTTCATTGTTTGTTGTGTTT+AGG | 0.238927 | 7.4:-10218349 | None:intergenic |
ACATGTGCAGTAACATTATT+TGG | 0.249799 | 7.4:+10219099 | MS.gene018546:intron |
CATTTAGTGGTACAATTTCT+TGG | 0.260400 | 7.4:-10218259 | None:intergenic |
CATGGGCTACCTTGGAAATA+AGG | 0.275680 | 7.4:+10218505 | MS.gene018546:CDS |
AAAGTCACCAAATGAAAATT+TGG | 0.280972 | 7.4:+10217422 | MS.gene018546:CDS |
TGTTTAGGGCTTGATGAATA+AGG | 0.282900 | 7.4:-10218334 | None:intergenic |
ACTAACATGGTTTCGATAAT+CGG | 0.290875 | 7.4:-10218450 | None:intergenic |
CGAAATTAGCTGTGAAGAAT+TGG | 0.311761 | 7.4:+10216380 | MS.gene018546:CDS |
TGCAGTAACATTATTTGGTT+GGG | 0.323446 | 7.4:+10219104 | MS.gene018546:intron |
TCGGGTTGGCACCGGCATCA+TGG | 0.329476 | 7.4:+10218487 | MS.gene018546:CDS |
CAATTCTTCACAGCTAATTT+CGG | 0.340578 | 7.4:-10216379 | None:intergenic |
AAATTACCAGAAAATTTATC+TGG | 0.355572 | 7.4:-10216609 | None:intergenic |
CTGCTTCGTTTGCACTCACT+TGG | 0.363285 | 7.4:+10218870 | MS.gene018546:CDS |
CTCTTATGTAGGATGTTTGT+GGG | 0.379291 | 7.4:+10217381 | MS.gene018546:intron |
AATCAGAAAATGTACGTTAG+AGG | 0.381947 | 7.4:+10219604 | MS.gene018546:CDS |
CAGCTGACATATATGTTATT+GGG | 0.381964 | 7.4:+10217475 | MS.gene018546:CDS |
GTTTGCACTCACTTGGCCTC+TGG | 0.396101 | 7.4:+10218877 | MS.gene018546:CDS |
TGCAAGTTTGAGCAACATAT+TGG | 0.398676 | 7.4:-10219313 | None:intergenic |
ACAGGTGTGATAGAATTCTA+TGG | 0.399028 | 7.4:+10219566 | MS.gene018546:intron |
GTTTAGGGCTTGATGAATAA+GGG | 0.405435 | 7.4:-10218333 | None:intergenic |
AGCACGTTCCCAGCATTTAG+TGG | 0.407177 | 7.4:-10218272 | None:intergenic |
AGGGCTAGCCACTTTGCTGC+GGG | 0.416097 | 7.4:-10218314 | None:intergenic |
TTTGTGGGGACGTGGAATGT+AGG | 0.418050 | 7.4:+10217396 | MS.gene018546:CDS |
CTAAATGCTGGGAACGTGCT+TGG | 0.423876 | 7.4:+10218275 | MS.gene018546:CDS |
CCATTTGCTTGTTTGCTACC+AGG | 0.431277 | 7.4:-10218397 | None:intergenic |
TAAATGCTGGGAACGTGCTT+GGG | 0.444324 | 7.4:+10218276 | MS.gene018546:CDS |
GAAATTGTACCACTAAATGC+TGG | 0.445434 | 7.4:+10218263 | MS.gene018546:CDS |
CGGGTTGGCACCGGCATCAT+GGG | 0.447268 | 7.4:+10218488 | MS.gene018546:CDS |
TTGTGGGGACGTGGAATGTA+GGG | 0.450793 | 7.4:+10217397 | MS.gene018546:CDS |
TGACGAGTTGCGTCGAAACT+TGG | 0.452102 | 7.4:+10218912 | MS.gene018546:CDS |
ACTCTTATGTAGGATGTTTG+TGG | 0.457552 | 7.4:+10217380 | MS.gene018546:intron |
TACAAATGGCGTGAAACGTT+CGG | 0.459480 | 7.4:+10217141 | MS.gene018546:CDS |
GTGCAGTAACATTATTTGGT+TGG | 0.462119 | 7.4:+10219103 | MS.gene018546:intron |
GCTGCAGCACAACAAGTAGA+TGG | 0.473238 | 7.4:-10219772 | None:intergenic |
TCACTAATCCTCTCAACCTT+AGG | 0.476045 | 7.4:+10217191 | MS.gene018546:CDS |
TTCATCAAGTATTTGTAAGT+AGG | 0.478887 | 7.4:-10219284 | None:intergenic |
TTGAATTATCGACTTGCCGC+TGG | 0.479201 | 7.4:+10219131 | MS.gene018546:CDS |
GGGACAAGATCTTGGGATAG+TGG | 0.487764 | 7.4:-10219719 | None:intergenic |
AGAGGATTAGTGATGAATGA+AGG | 0.488020 | 7.4:-10217181 | None:intergenic |
GTACGAGGATGTAGCTATCT+TGG | 0.489085 | 7.4:-10216587 | None:intergenic |
CTGGTCGAATATTTGAAGGT+TGG | 0.497523 | 7.4:+10219237 | MS.gene018546:CDS |
AATGCTGGTCGAATATTTGA+AGG | 0.500439 | 7.4:+10219233 | MS.gene018546:CDS |
GGCGTGAAACGTTCGGTGCA+TGG | 0.505889 | 7.4:+10217148 | MS.gene018546:CDS |
TGGTTGAAGCATTCTACAAA+TGG | 0.512632 | 7.4:+10217127 | MS.gene018546:CDS |
CCTGGTAGCAAACAAGCAAA+TGG | 0.520209 | 7.4:+10218397 | MS.gene018546:CDS |
TCAAAAGCAACGCTTTAGCC+TGG | 0.520681 | 7.4:+10218379 | MS.gene018546:CDS |
ACCGGCATCATGGGCTACCT+TGG | 0.522568 | 7.4:+10218497 | MS.gene018546:CDS |
TAGTCAATTGAAAGTGTCTC+GGG | 0.522741 | 7.4:+10218469 | MS.gene018546:CDS |
CCAATAACATATATGTCAGC+TGG | 0.523558 | 7.4:-10217474 | None:intergenic |
TATAACGAACCTTATTTCCA+AGG | 0.527154 | 7.4:-10218514 | None:intergenic |
TTAGTCAATTGAAAGTGTCT+CGG | 0.528023 | 7.4:+10218468 | MS.gene018546:CDS |
GTAGGATGTTTGTGGGGACG+TGG | 0.528198 | 7.4:+10217388 | MS.gene018546:intron |
CTACTACAAGAATCTTGAAA+CGG | 0.529886 | 7.4:-10219857 | None:intergenic |
CTAAGGATGGAGCAGAATGC+TGG | 0.532553 | 7.4:+10219218 | MS.gene018546:intron |
AATGTAGCAGAATTTGTGAA+TGG | 0.533693 | 7.4:-10219748 | None:intergenic |
TGCTCAAACTTGCAAATCAA+AGG | 0.537586 | 7.4:+10219322 | MS.gene018546:CDS |
GCAGTAACATTATTTGGTTG+GGG | 0.544614 | 7.4:+10219105 | MS.gene018546:intron |
AAAGTGTCTCGGGTTGGCAC+CGG | 0.545675 | 7.4:+10218479 | MS.gene018546:CDS |
TCCAAGGTAGCCCATGATGC+CGG | 0.561325 | 7.4:-10218498 | None:intergenic |
AAACGAAGCAGAATGTGGTT+TGG | 0.562582 | 7.4:-10218858 | None:intergenic |
AGCATTTACCTAAGGTTGAG+AGG | 0.566487 | 7.4:-10217199 | None:intergenic |
ATAGAGAATACACTGGCCTA+TGG | 0.566815 | 7.4:-10219645 | None:intergenic |
AAGGGCTAGCCACTTTGCTG+CGG | 0.577787 | 7.4:-10218315 | None:intergenic |
TGTGGGGACGTGGAATGTAG+GGG | 0.581088 | 7.4:+10217398 | MS.gene018546:CDS |
ACTCATGTTCTAGTATGCCA+AGG | 0.581273 | 7.4:-10218975 | None:intergenic |
AGAATTCTATGGAAAGGAGA+AGG | 0.582288 | 7.4:+10219577 | MS.gene018546:CDS |
AGTCAAAATTCTCTGACCAT+AGG | 0.590762 | 7.4:+10219629 | MS.gene018546:CDS |
TGTGATAGAATTCTATGGAA+AGG | 0.592001 | 7.4:+10219571 | MS.gene018546:CDS |
CAGTAACATTATTTGGTTGG+GGG | 0.598927 | 7.4:+10219106 | MS.gene018546:intron |
ACAGTGGCCCCGCAGCAAAG+TGG | 0.601199 | 7.4:+10218306 | MS.gene018546:CDS |
AAATTGTACCACTAAATGCT+GGG | 0.602264 | 7.4:+10218264 | MS.gene018546:CDS |
GTGGGGACGTGGAATGTAGG+GGG | 0.604727 | 7.4:+10217399 | MS.gene018546:CDS |
ATATTTGAAGGTTGGAACGA+AGG | 0.607113 | 7.4:+10219245 | MS.gene018546:CDS |
CTCATGTTCTAGTATGCCAA+GGG | 0.607226 | 7.4:-10218974 | None:intergenic |
ACACTTTCAATTGACTAACA+TGG | 0.611634 | 7.4:-10218463 | None:intergenic |
CAATTGAAAGTGTCTCGGGT+TGG | 0.613575 | 7.4:+10218473 | MS.gene018546:CDS |
GTAGCAAACAAGCAAATGGT+TGG | 0.614177 | 7.4:+10218401 | MS.gene018546:CDS |
CAGAAAATTTATCTGGTACG+AGG | 0.626787 | 7.4:-10216602 | None:intergenic |
GTCACCACATTTCTCTCCAG+AGG | 0.633659 | 7.4:-10218893 | None:intergenic |
GGGCTAGCCACTTTGCTGCG+GGG | 0.635408 | 7.4:-10218313 | None:intergenic |
AGTGCAAACGAAGCAGAATG+TGG | 0.656443 | 7.4:-10218863 | None:intergenic |
ACCTGTAACAGAATAATCTG+AGG | 0.659074 | 7.4:-10216434 | None:intergenic |
ATGAATTTCATCGTAACCAG+CGG | 0.666776 | 7.4:-10219147 | None:intergenic |
TTGGCCTCTGGAGAGAAATG+TGG | 0.675287 | 7.4:+10218889 | MS.gene018546:CDS |
AACTCGTGTTACTAGCAACA+AGG | 0.677771 | 7.4:+10219815 | MS.gene018546:CDS |
TCTTATGTAGGATGTTTGTG+GGG | 0.688950 | 7.4:+10217382 | MS.gene018546:intron |
GCGTCGAAACTTGGACATCG+CGG | 0.722714 | 7.4:+10218921 | MS.gene018546:CDS |
GTGCTTGGGTCTGAGAACAG+TGG | 0.725376 | 7.4:+10218290 | MS.gene018546:CDS |
GCTGTGAATAGAGAATACAC+TGG | 0.824587 | 7.4:-10219652 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATAAAAAGTTTGTAAT+TGG | + | chr7.4:10216809-10216828 | MS.gene018546:intron | 10.0% |
!!! | ATTACAAACTTTTTATTTTT+TGG | - | chr7.4:10216809-10216828 | None:intergenic | 10.0% |
!!! | TTACAAACTTTTTATTTTTT+GGG | - | chr7.4:10216808-10216827 | None:intergenic | 10.0% |
!! | AAATCTAATTTATGTTGTAT+TGG | + | chr7.4:10218214-10218233 | MS.gene018546:intron | 15.0% |
!! | AAATTTCGTTAAATATTCTT+AGG | + | chr7.4:10217641-10217660 | MS.gene018546:intron | 15.0% |
!! | ATCATATAAAAATAAGAAGT+TGG | - | chr7.4:10218138-10218157 | None:intergenic | 15.0% |
!! | CTATCTAAGTAATTAATATT+TGG | + | chr7.4:10217084-10217103 | MS.gene018546:intron | 15.0% |
!! | TCTTTATTACTATAAATCAA+TGG | + | chr7.4:10219049-10219068 | MS.gene018546:intron | 15.0% |
!! | TTAAATAATCATTGAAATCA+AGG | - | chr7.4:10217772-10217791 | None:intergenic | 15.0% |
!! | TTAATTGATCCATATATAAA+AGG | - | chr7.4:10217623-10217642 | None:intergenic | 15.0% |
!!! | ATCTTTTAATTAATGTTTCT+TGG | + | chr7.4:10219506-10219525 | MS.gene018546:intron | 15.0% |
!!! | ATTTTAATTAAGATTGTGAT+TGG | + | chr7.4:10216468-10216487 | MS.gene018546:intron | 15.0% |
!!! | TAATTTGTTCTTTGTTAATT+TGG | + | chr7.4:10219075-10219094 | MS.gene018546:intron | 15.0% |
!!! | TACTGTAATTTTTTTCTTTT+GGG | + | chr7.4:10217058-10217077 | MS.gene018546:intron | 15.0% |
!!! | TATTTTTTTGGAAGAAATAT+TGG | + | chr7.4:10216739-10216758 | MS.gene018546:intron | 15.0% |
!!! | TTACTGTAATTTTTTTCTTT+TGG | + | chr7.4:10217057-10217076 | MS.gene018546:intron | 15.0% |
!!! | TTTATTTTATTTTTAGCAAG+AGG | + | chr7.4:10217325-10217344 | MS.gene018546:intron | 15.0% |
!! | AAAATTTGGACTTGAAAAAT+TGG | + | chr7.4:10217436-10217455 | MS.gene018546:CDS | 20.0% |
!! | AAATTACCAGAAAATTTATC+TGG | - | chr7.4:10216612-10216631 | None:intergenic | 20.0% |
!! | AATTGAATTAACTCTTATGT+AGG | + | chr7.4:10217370-10217389 | MS.gene018546:intron | 20.0% |
!! | ACCACATATATTATATGATA+TGG | - | chr7.4:10218620-10218639 | None:intergenic | 20.0% |
!! | ACTAAAAAACAATAACTTGA+AGG | + | chr7.4:10219175-10219194 | MS.gene018546:CDS | 20.0% |
!! | ATCCATATATAAAAGGTAAT+AGG | - | chr7.4:10217616-10217635 | None:intergenic | 20.0% |
!! | CATATATTAGAATCAAAGAT+TGG | + | chr7.4:10216956-10216975 | MS.gene018546:intron | 20.0% |
!! | TACACCTATTTATATTCAAA+TGG | - | chr7.4:10217736-10217755 | None:intergenic | 20.0% |
!! | TCCATATCATATAATATATG+TGG | + | chr7.4:10218616-10218635 | MS.gene018546:intron | 20.0% |
!! | TGAATTCATGTATAAAATGT+TGG | + | chr7.4:10219533-10219552 | MS.gene018546:intron | 20.0% |
!! | TGCTACTATTAAACAAAAAA+TGG | - | chr7.4:10216986-10217005 | None:intergenic | 20.0% |
!!! | AAATCATAAAACAAAGTGTT+GGG | - | chr7.4:10216636-10216655 | None:intergenic | 20.0% |
!!! | AAATTGTGTTGATAGTATAT+AGG | + | chr7.4:10218581-10218600 | MS.gene018546:intron | 20.0% |
!!! | AATTTGGAATCATTATTCAT+AGG | - | chr7.4:10219005-10219024 | None:intergenic | 20.0% |
!!! | AATTTTTTTGCACATGTTAA+AGG | - | chr7.4:10217991-10218010 | None:intergenic | 20.0% |
!!! | ACACATAAACATGTTTTAAT+CGG | + | chr7.4:10218024-10218043 | MS.gene018546:intron | 20.0% |
!!! | ATGTTTTTGTTTAATCTTTG+TGG | + | chr7.4:10216519-10216538 | MS.gene018546:intron | 20.0% |
!!! | CTTTAGAACAAAAAATACTA+TGG | - | chr7.4:10216919-10216938 | None:intergenic | 20.0% |
!!! | TGTTTTTGTTTAATCTTTGT+GGG | + | chr7.4:10216520-10216539 | MS.gene018546:intron | 20.0% |
!!! | TTTCGGAGTAATTATTTTTT+TGG | + | chr7.4:10216727-10216746 | MS.gene018546:intron | 20.0% |
! | AAAGTCACCAAATGAAAATT+TGG | + | chr7.4:10217422-10217441 | MS.gene018546:CDS | 25.0% |
! | AATAGAGTCAAAAAAATCCA+AGG | + | chr7.4:10216253-10216272 | MS.gene018546:CDS | 25.0% |
! | ACCTATTTATATTCAAATGG+TGG | - | chr7.4:10217733-10217752 | None:intergenic | 25.0% |
! | ACTTCAAAAAATAGGTATGA+TGG | - | chr7.4:10217226-10217245 | None:intergenic | 25.0% |
! | ATAAAATACTACAGACAAAG+TGG | - | chr7.4:10217568-10217587 | None:intergenic | 25.0% |
! | ATATCTTAATGCTCTTACTT+AGG | - | chr7.4:10217960-10217979 | None:intergenic | 25.0% |
! | ATGTCCTATACTATTGTATA+TGG | + | chr7.4:10218651-10218670 | MS.gene018546:intron | 25.0% |
! | ATGTTTAGCTAAAATAAGCT+AGG | - | chr7.4:10217288-10217307 | None:intergenic | 25.0% |
! | CAAATCATAAAACAAAGTGT+TGG | - | chr7.4:10216637-10216656 | None:intergenic | 25.0% |
! | CATATATAAAAGGTAATAGG+TGG | - | chr7.4:10217613-10217632 | None:intergenic | 25.0% |
! | CTTCAAAAAATAGGTATGAT+GGG | - | chr7.4:10217225-10217244 | None:intergenic | 25.0% |
! | TGTCCTATACTATTGTATAT+GGG | + | chr7.4:10218652-10218671 | MS.gene018546:intron | 25.0% |
! | TTATAAAAATCATACCAAGC+AGG | - | chr7.4:10219362-10219381 | None:intergenic | 25.0% |
! | TTCATCAAGTATTTGTAAGT+AGG | - | chr7.4:10219287-10219306 | None:intergenic | 25.0% |
!! | CACATGTTACTTCAAAAAAT+AGG | - | chr7.4:10217234-10217253 | None:intergenic | 25.0% |
!! | CACCTATTACCTTTTATATA+TGG | + | chr7.4:10217611-10217630 | MS.gene018546:intron | 25.0% |
!! | GCAAATACTTTATGCAATTT+TGG | + | chr7.4:10217804-10217823 | MS.gene018546:intron | 25.0% |
!! | TTCAAGTCCAAATTTTCATT+TGG | - | chr7.4:10217432-10217451 | None:intergenic | 25.0% |
!!! | AAGAGCATTAAGATATTTGA+AGG | + | chr7.4:10217964-10217983 | MS.gene018546:intron | 25.0% |
!!! | AGAATTTGTGAATGGTTTTA+AGG | - | chr7.4:10219743-10219762 | None:intergenic | 25.0% |
!!! | AGTCAAAAAGTACTCTAATT+TGG | - | chr7.4:10218170-10218189 | None:intergenic | 25.0% |
!!! | ATTAGAGTACTTTTTGACTT+TGG | + | chr7.4:10218171-10218190 | MS.gene018546:intron | 25.0% |
!!! | CTATTTTTTGAAGTAACATG+TGG | + | chr7.4:10217232-10217251 | MS.gene018546:intron | 25.0% |
!!! | GAATTTGTGAATGGTTTTAA+GGG | - | chr7.4:10219742-10219761 | None:intergenic | 25.0% |
!!! | TTCATTGTTTGTTGTGTTTA+GGG | - | chr7.4:10218351-10218370 | None:intergenic | 25.0% |
!!! | TTTCATTGTTTGTTGTGTTT+AGG | - | chr7.4:10218352-10218371 | None:intergenic | 25.0% |
AAATTGTACCACTAAATGCT+GGG | + | chr7.4:10218264-10218283 | MS.gene018546:CDS | 30.0% | |
AATCAGAAAATGTACGTTAG+AGG | + | chr7.4:10219604-10219623 | MS.gene018546:CDS | 30.0% | |
AATGTAGCAGAATTTGTGAA+TGG | - | chr7.4:10219751-10219770 | None:intergenic | 30.0% | |
AATTTGTGTTGTATGCTAAC+AGG | + | chr7.4:10218807-10218826 | MS.gene018546:intron | 30.0% | |
ACACTTTCAATTGACTAACA+TGG | - | chr7.4:10218466-10218485 | None:intergenic | 30.0% | |
ACATGTGCAGTAACATTATT+TGG | + | chr7.4:10219099-10219118 | MS.gene018546:intron | 30.0% | |
ACTAACATGGTTTCGATAAT+CGG | - | chr7.4:10218453-10218472 | None:intergenic | 30.0% | |
ATGTGACACTTAATATGTGA+CGG | + | chr7.4:10219450-10219469 | MS.gene018546:intron | 30.0% | |
ATTTGTGTTGTATGCTAACA+GGG | + | chr7.4:10218808-10218827 | MS.gene018546:intron | 30.0% | |
CAATTCTTCACAGCTAATTT+CGG | - | chr7.4:10216382-10216401 | None:intergenic | 30.0% | |
CAGCTGACATATATGTTATT+GGG | + | chr7.4:10217475-10217494 | MS.gene018546:CDS | 30.0% | |
CATAATGTGAATATTCGCAA+TGG | - | chr7.4:10219420-10219439 | None:intergenic | 30.0% | |
CATTTAGTGGTACAATTTCT+TGG | - | chr7.4:10218262-10218281 | None:intergenic | 30.0% | |
GAACAGTGAATCCTTAATTT+CGG | + | chr7.4:10216680-10216699 | MS.gene018546:intron | 30.0% | |
GCCACCATTTGAATATAAAT+AGG | + | chr7.4:10217729-10217748 | MS.gene018546:intron | 30.0% | |
GTCCTATACTATTGTATATG+GGG | + | chr7.4:10218653-10218672 | MS.gene018546:intron | 30.0% | |
TAAACTTGTGTTATCAAGCT+CGG | - | chr7.4:10217934-10217953 | None:intergenic | 30.0% | |
TACTAGAAAAAGATCAGCTA+AGG | + | chr7.4:10219201-10219220 | MS.gene018546:intron | 30.0% | |
TATCATCTATGTCTCCTATT+TGG | + | chr7.4:10217535-10217554 | MS.gene018546:intron | 30.0% | |
TCCTATACTATTGTATATGG+GGG | + | chr7.4:10218654-10218673 | MS.gene018546:intron | 30.0% | |
TGCAGTAACATTATTTGGTT+GGG | + | chr7.4:10219104-10219123 | MS.gene018546:intron | 30.0% | |
TGTGATAGAATTCTATGGAA+AGG | + | chr7.4:10219571-10219590 | MS.gene018546:CDS | 30.0% | |
! | AACATCTGTCTTGATGATTA+TGG | + | chr7.4:10217679-10217698 | MS.gene018546:intron | 30.0% |
! | AATGTTGGTTGAAATGAAAC+AGG | + | chr7.4:10219548-10219567 | MS.gene018546:intron | 30.0% |
! | TATAACGAACCTTATTTCCA+AGG | - | chr7.4:10218517-10218536 | None:intergenic | 30.0% |
! | TATTGCTTCAGATTTTGCTA+TGG | + | chr7.4:10218704-10218723 | MS.gene018546:intron | 30.0% |
!! | TTAGTCAATTGAAAGTGTCT+CGG | + | chr7.4:10218468-10218487 | MS.gene018546:CDS | 30.0% |
!! | TTGGTTTTCATCATTGAGTT+TGG | + | chr7.4:10216487-10216506 | MS.gene018546:intron | 30.0% |
!!! | TAAAGCGTTGCTTTTGATTT+GGG | - | chr7.4:10218376-10218395 | None:intergenic | 30.0% |
AAACTTGTGTTATCAAGCTC+GGG | - | chr7.4:10217933-10217952 | None:intergenic | 35.0% | |
AAAGTGGTAGATAGCCAAAT+AGG | - | chr7.4:10217552-10217571 | None:intergenic | 35.0% | |
AATGCTGGTCGAATATTTGA+AGG | + | chr7.4:10219233-10219252 | MS.gene018546:CDS | 35.0% | |
ACAGGTGTGATAGAATTCTA+TGG | + | chr7.4:10219566-10219585 | MS.gene018546:intron | 35.0% | |
ACCTCAGATTATTCTGTTAC+AGG | + | chr7.4:10216433-10216452 | MS.gene018546:CDS | 35.0% | |
ACCTGTAACAGAATAATCTG+AGG | - | chr7.4:10216437-10216456 | None:intergenic | 35.0% | |
ACTCTTATGTAGGATGTTTG+TGG | + | chr7.4:10217380-10217399 | MS.gene018546:intron | 35.0% | |
AGAAAAAGATCAGCTAAGGA+TGG | + | chr7.4:10219205-10219224 | MS.gene018546:intron | 35.0% | |
AGAATTCTATGGAAAGGAGA+AGG | + | chr7.4:10219577-10219596 | MS.gene018546:CDS | 35.0% | |
AGTCAAAATTCTCTGACCAT+AGG | + | chr7.4:10219629-10219648 | MS.gene018546:CDS | 35.0% | |
ATATTTGAAGGTTGGAACGA+AGG | + | chr7.4:10219245-10219264 | MS.gene018546:CDS | 35.0% | |
ATGAATTTCATCGTAACCAG+CGG | - | chr7.4:10219150-10219169 | None:intergenic | 35.0% | |
CAGAAAATTTATCTGGTACG+AGG | - | chr7.4:10216605-10216624 | None:intergenic | 35.0% | |
CAGTAACATTATTTGGTTGG+GGG | + | chr7.4:10219106-10219125 | MS.gene018546:intron | 35.0% | |
CCAATAACATATATGTCAGC+TGG | - | chr7.4:10217477-10217496 | None:intergenic | 35.0% | |
CCAGCTGACATATATGTTAT+TGG | + | chr7.4:10217474-10217493 | MS.gene018546:CDS | 35.0% | |
CCTATACTATTGTATATGGG+GGG | + | chr7.4:10218655-10218674 | MS.gene018546:intron | 35.0% | |
CGAAATTAGCTGTGAAGAAT+TGG | + | chr7.4:10216380-10216399 | MS.gene018546:CDS | 35.0% | |
CTCTTATGTAGGATGTTTGT+GGG | + | chr7.4:10217381-10217400 | MS.gene018546:intron | 35.0% | |
GAAATTGTACCACTAAATGC+TGG | + | chr7.4:10218263-10218282 | MS.gene018546:CDS | 35.0% | |
GCAGTAACATTATTTGGTTG+GGG | + | chr7.4:10219105-10219124 | MS.gene018546:intron | 35.0% | |
GTGACATTTCAAGATGAAGT+AGG | + | chr7.4:10218731-10218750 | MS.gene018546:intron | 35.0% | |
GTGCAGTAACATTATTTGGT+TGG | + | chr7.4:10219103-10219122 | MS.gene018546:intron | 35.0% | |
TCTTATGTAGGATGTTTGTG+GGG | + | chr7.4:10217382-10217401 | MS.gene018546:intron | 35.0% | |
TGATTATGGCTTATCTACGA+CGG | + | chr7.4:10217693-10217712 | MS.gene018546:intron | 35.0% | |
TGCAAGTTTGAGCAACATAT+TGG | - | chr7.4:10219316-10219335 | None:intergenic | 35.0% | |
TGCTCAAACTTGCAAATCAA+AGG | + | chr7.4:10219322-10219341 | MS.gene018546:CDS | 35.0% | |
! | ACTAAATTTTCTCACTCCCT+TGG | + | chr7.4:10218958-10218977 | MS.gene018546:CDS | 35.0% |
! | AGAGGATTAGTGATGAATGA+AGG | - | chr7.4:10217184-10217203 | None:intergenic | 35.0% |
! | CTCGTACCAGATAAATTTTC+TGG | + | chr7.4:10216603-10216622 | MS.gene018546:CDS | 35.0% |
! | GTTTAGGGCTTGATGAATAA+GGG | - | chr7.4:10218336-10218355 | None:intergenic | 35.0% |
! | TAGAGTGCTAAGCTTGTATT+TGG | + | chr7.4:10216773-10216792 | MS.gene018546:intron | 35.0% |
! | TATGCTTGGATCTAGTGTTT+TGG | + | chr7.4:10216704-10216723 | MS.gene018546:intron | 35.0% |
! | TCGTTATAAGTCAGACGTTT+TGG | + | chr7.4:10218529-10218548 | MS.gene018546:intron | 35.0% |
! | TGGTTGAAGCATTCTACAAA+TGG | + | chr7.4:10217127-10217146 | MS.gene018546:CDS | 35.0% |
! | TGTTTAGGGCTTGATGAATA+AGG | - | chr7.4:10218337-10218356 | None:intergenic | 35.0% |
! | TTAATTTTGTGCTGCAGTCA+TGG | + | chr7.4:10216356-10216375 | MS.gene018546:intron | 35.0% |
!! | TAGTCAATTGAAAGTGTCTC+GGG | + | chr7.4:10218469-10218488 | MS.gene018546:CDS | 35.0% |
!!! | AGAGTACTTTTTGACTTTGG+AGG | + | chr7.4:10218174-10218193 | MS.gene018546:intron | 35.0% |
!!! | CTAAAGCGTTGCTTTTGATT+TGG | - | chr7.4:10218377-10218396 | None:intergenic | 35.0% |
!!! | GTTTTAAGGGACAAGATCTT+GGG | - | chr7.4:10219729-10219748 | None:intergenic | 35.0% |
!!! | TGGATCTAGTGTTTTGGTTT+CGG | + | chr7.4:10216710-10216729 | MS.gene018546:intron | 35.0% |
!!! | TGGTCCTTGTTTTCAAAGAA+GGG | + | chr7.4:10217104-10217123 | MS.gene018546:intron | 35.0% |
!!! | TTGGTCCTTGTTTTCAAAGA+AGG | + | chr7.4:10217103-10217122 | MS.gene018546:intron | 35.0% |
AAACGAAGCAGAATGTGGTT+TGG | - | chr7.4:10218861-10218880 | None:intergenic | 40.0% | |
ACTCATGTTCTAGTATGCCA+AGG | - | chr7.4:10218978-10218997 | None:intergenic | 40.0% | |
AGCATTTACCTAAGGTTGAG+AGG | - | chr7.4:10217202-10217221 | None:intergenic | 40.0% | |
CCCCCCATATACAATAGTAT+AGG | - | chr7.4:10218658-10218677 | None:intergenic | 40.0% | |
CTCATGTTCTAGTATGCCAA+GGG | - | chr7.4:10218977-10218996 | None:intergenic | 40.0% | |
CTGGTCGAATATTTGAAGGT+TGG | + | chr7.4:10219237-10219256 | MS.gene018546:CDS | 40.0% | |
GATGAAGTAGGACTATGTAC+TGG | + | chr7.4:10218743-10218762 | MS.gene018546:intron | 40.0% | |
GCTGTGAATAGAGAATACAC+TGG | - | chr7.4:10219655-10219674 | None:intergenic | 40.0% | |
GTAGCAAACAAGCAAATGGT+TGG | + | chr7.4:10218401-10218420 | MS.gene018546:CDS | 40.0% | |
GTATATGGGGGGCTATAAAA+TGG | + | chr7.4:10218666-10218685 | MS.gene018546:intron | 40.0% | |
TACAAATGGCGTGAAACGTT+CGG | + | chr7.4:10217141-10217160 | MS.gene018546:CDS | 40.0% | |
TCACTAATCCTCTCAACCTT+AGG | + | chr7.4:10217191-10217210 | MS.gene018546:CDS | 40.0% | |
TCCAAGCATAGCCGAAATTA+AGG | - | chr7.4:10216694-10216713 | None:intergenic | 40.0% | |
TCCTTAATTTCGGCTATGCT+TGG | + | chr7.4:10216690-10216709 | MS.gene018546:intron | 40.0% | |
! | AACTCGTGTTACTAGCAACA+AGG | + | chr7.4:10219815-10219834 | MS.gene018546:CDS | 40.0% |
! | ACCACCCTTCTTTGAAAACA+AGG | - | chr7.4:10217111-10217130 | None:intergenic | 40.0% |
! | ATAGAGAATACACTGGCCTA+TGG | - | chr7.4:10219648-10219667 | None:intergenic | 40.0% |
! | TGGCTTGTCTTTGATCTCTT+AGG | + | chr7.4:10218234-10218253 | MS.gene018546:intron | 40.0% |
! | TGGTATTTTCTTGTGCGTGT+GGG | + | chr7.4:10218421-10218440 | MS.gene018546:CDS | 40.0% |
! | TTGGTATTTTCTTGTGCGTG+TGG | + | chr7.4:10218420-10218439 | MS.gene018546:CDS | 40.0% |
!! | AAGGTAATAGGTGGACTAAG+TGG | - | chr7.4:10217604-10217623 | None:intergenic | 40.0% |
!! | ATGATGGGAGCATTTACCTA+AGG | - | chr7.4:10217210-10217229 | None:intergenic | 40.0% |
!!! | GGTTTTAAGGGACAAGATCT+TGG | - | chr7.4:10219730-10219749 | None:intergenic | 40.0% |
!!! | TCCTTGTTTTCAAAGAAGGG+TGG | + | chr7.4:10217107-10217126 | MS.gene018546:intron | 40.0% |
AATCTTTGTGGGACTCACTC+AGG | + | chr7.4:10216531-10216550 | MS.gene018546:intron | 45.0% | |
AGTGCAAACGAAGCAGAATG+TGG | - | chr7.4:10218866-10218885 | None:intergenic | 45.0% | |
ATCTTTGTGGGACTCACTCA+GGG | + | chr7.4:10216532-10216551 | MS.gene018546:intron | 45.0% | |
CCTGGTAGCAAACAAGCAAA+TGG | + | chr7.4:10218397-10218416 | MS.gene018546:CDS | 45.0% | |
GCAAGAGAATGTGCATACCT+TGG | - | chr7.4:10216273-10216292 | None:intergenic | 45.0% | |
GTACGAGGATGTAGCTATCT+TGG | - | chr7.4:10216590-10216609 | None:intergenic | 45.0% | |
TAAATGCTGGGAACGTGCTT+GGG | + | chr7.4:10218276-10218295 | MS.gene018546:CDS | 45.0% | |
TCAAAAGCAACGCTTTAGCC+TGG | + | chr7.4:10218379-10218398 | MS.gene018546:CDS | 45.0% | |
! | CATGGGCTACCTTGGAAATA+AGG | + | chr7.4:10218505-10218524 | MS.gene018546:CDS | 45.0% |
! | CCATTTGCTTGTTTGCTACC+AGG | - | chr7.4:10218400-10218419 | None:intergenic | 45.0% |
!! | CAATTGAAAGTGTCTCGGGT+TGG | + | chr7.4:10218473-10218492 | MS.gene018546:CDS | 45.0% |
!! | TTGAATTATCGACTTGCCGC+TGG | + | chr7.4:10219131-10219150 | MS.gene018546:CDS | 45.0% |
!! | ATATTAAATAATTAGAAATT+TGG | - | chr7.4:10219021-10219040 | None:intergenic | 5.0% |
!!! | ATATTATTAACTTAAATTTT+AGG | - | chr7.4:10217262-10217281 | None:intergenic | 5.0% |
AAAAACGACGCACTCCTGCT+TGG | + | chr7.4:10219345-10219364 | MS.gene018546:CDS | 50.0% | |
AGCACGTTCCCAGCATTTAG+TGG | - | chr7.4:10218275-10218294 | None:intergenic | 50.0% | |
CTAAATGCTGGGAACGTGCT+TGG | + | chr7.4:10218275-10218294 | MS.gene018546:CDS | 50.0% | |
CTAAGGATGGAGCAGAATGC+TGG | + | chr7.4:10219218-10219237 | MS.gene018546:intron | 50.0% | |
CTGCTTCGTTTGCACTCACT+TGG | + | chr7.4:10218870-10218889 | MS.gene018546:CDS | 50.0% | |
GCTGCAGCACAACAAGTAGA+TGG | - | chr7.4:10219775-10219794 | None:intergenic | 50.0% | |
GGGACAAGATCTTGGGATAG+TGG | - | chr7.4:10219722-10219741 | None:intergenic | 50.0% | |
GTCACCACATTTCTCTCCAG+AGG | - | chr7.4:10218896-10218915 | None:intergenic | 50.0% | |
TGACGAGTTGCGTCGAAACT+TGG | + | chr7.4:10218912-10218931 | MS.gene018546:CDS | 50.0% | |
TTGTGGGGACGTGGAATGTA+GGG | + | chr7.4:10217397-10217416 | MS.gene018546:CDS | 50.0% | |
TTTGTGGGGACGTGGAATGT+AGG | + | chr7.4:10217396-10217415 | MS.gene018546:CDS | 50.0% | |
! | TTGGCCTCTGGAGAGAAATG+TGG | + | chr7.4:10218889-10218908 | MS.gene018546:CDS | 50.0% |
!! | GGACTATGTACTGGCTACAG+TGG | + | chr7.4:10218752-10218771 | MS.gene018546:intron | 50.0% |
GCGTCGAAACTTGGACATCG+CGG | + | chr7.4:10218921-10218940 | MS.gene018546:CDS | 55.0% | |
GTAGGATGTTTGTGGGGACG+TGG | + | chr7.4:10217388-10217407 | MS.gene018546:intron | 55.0% | |
GTGCTTGGGTCTGAGAACAG+TGG | + | chr7.4:10218290-10218309 | MS.gene018546:CDS | 55.0% | |
GTTTGCACTCACTTGGCCTC+TGG | + | chr7.4:10218877-10218896 | MS.gene018546:CDS | 55.0% | |
TCCAAGGTAGCCCATGATGC+CGG | - | chr7.4:10218501-10218520 | None:intergenic | 55.0% | |
TGTGGGGACGTGGAATGTAG+GGG | + | chr7.4:10217398-10217417 | MS.gene018546:CDS | 55.0% | |
!! | AAAGTGTCTCGGGTTGGCAC+CGG | + | chr7.4:10218479-10218498 | MS.gene018546:CDS | 55.0% |
!! | AAGGGCTAGCCACTTTGCTG+CGG | - | chr7.4:10218318-10218337 | None:intergenic | 55.0% |
GTGGGGACGTGGAATGTAGG+GGG | + | chr7.4:10217399-10217418 | MS.gene018546:CDS | 60.0% | |
! | ACCGGCATCATGGGCTACCT+TGG | + | chr7.4:10218497-10218516 | MS.gene018546:CDS | 60.0% |
!! | AGGGCTAGCCACTTTGCTGC+GGG | - | chr7.4:10218317-10218336 | None:intergenic | 60.0% |
!! | GGCGTGAAACGTTCGGTGCA+TGG | + | chr7.4:10217148-10217167 | MS.gene018546:CDS | 60.0% |
ACAGTGGCCCCGCAGCAAAG+TGG | + | chr7.4:10218306-10218325 | MS.gene018546:CDS | 65.0% | |
!! | CGGGTTGGCACCGGCATCAT+GGG | + | chr7.4:10218488-10218507 | MS.gene018546:CDS | 65.0% |
!! | GGGCTAGCCACTTTGCTGCG+GGG | - | chr7.4:10218316-10218335 | None:intergenic | 65.0% |
!! | TCGGGTTGGCACCGGCATCA+TGG | + | chr7.4:10218487-10218506 | MS.gene018546:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 10216248 | 10219876 | 10216248 | ID=MS.gene018546 |
chr7.4 | mRNA | 10216248 | 10219876 | 10216248 | ID=MS.gene018546.t1;Parent=MS.gene018546 |
chr7.4 | exon | 10216248 | 10216274 | 10216248 | ID=MS.gene018546.t1.exon1;Parent=MS.gene018546.t1 |
chr7.4 | CDS | 10216248 | 10216274 | 10216248 | ID=cds.MS.gene018546.t1;Parent=MS.gene018546.t1 |
chr7.4 | exon | 10216373 | 10216454 | 10216373 | ID=MS.gene018546.t1.exon2;Parent=MS.gene018546.t1 |
chr7.4 | CDS | 10216373 | 10216454 | 10216373 | ID=cds.MS.gene018546.t1;Parent=MS.gene018546.t1 |
chr7.4 | exon | 10216553 | 10216624 | 10216553 | ID=MS.gene018546.t1.exon3;Parent=MS.gene018546.t1 |
chr7.4 | CDS | 10216553 | 10216624 | 10216553 | ID=cds.MS.gene018546.t1;Parent=MS.gene018546.t1 |
chr7.4 | exon | 10217122 | 10217212 | 10217122 | ID=MS.gene018546.t1.exon4;Parent=MS.gene018546.t1 |
chr7.4 | CDS | 10217122 | 10217212 | 10217122 | ID=cds.MS.gene018546.t1;Parent=MS.gene018546.t1 |
chr7.4 | exon | 10217392 | 10217496 | 10217392 | ID=MS.gene018546.t1.exon5;Parent=MS.gene018546.t1 |
chr7.4 | CDS | 10217392 | 10217496 | 10217392 | ID=cds.MS.gene018546.t1;Parent=MS.gene018546.t1 |
chr7.4 | exon | 10218256 | 10218526 | 10218256 | ID=MS.gene018546.t1.exon6;Parent=MS.gene018546.t1 |
chr7.4 | CDS | 10218256 | 10218526 | 10218256 | ID=cds.MS.gene018546.t1;Parent=MS.gene018546.t1 |
chr7.4 | exon | 10218829 | 10218995 | 10218829 | ID=MS.gene018546.t1.exon7;Parent=MS.gene018546.t1 |
chr7.4 | CDS | 10218829 | 10218995 | 10218829 | ID=cds.MS.gene018546.t1;Parent=MS.gene018546.t1 |
chr7.4 | exon | 10219109 | 10219196 | 10219109 | ID=MS.gene018546.t1.exon8;Parent=MS.gene018546.t1 |
chr7.4 | CDS | 10219109 | 10219196 | 10219109 | ID=cds.MS.gene018546.t1;Parent=MS.gene018546.t1 |
chr7.4 | exon | 10219230 | 10219366 | 10219230 | ID=MS.gene018546.t1.exon9;Parent=MS.gene018546.t1 |
chr7.4 | CDS | 10219230 | 10219366 | 10219230 | ID=cds.MS.gene018546.t1;Parent=MS.gene018546.t1 |
chr7.4 | exon | 10219570 | 10219876 | 10219570 | ID=MS.gene018546.t1.exon10;Parent=MS.gene018546.t1 |
chr7.4 | CDS | 10219570 | 10219876 | 10219570 | ID=cds.MS.gene018546.t1;Parent=MS.gene018546.t1 |
Gene Sequence |
Protein sequence |