AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene023937

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene023937.t1 MTR_7g078330 96.890 643 19 1 1 643 1 642 0.0 1269
MS.gene023937.t1 MTR_4g063800 42.258 620 340 4 39 643 12 628 1.63e-167 494
MS.gene023937.t1 MTR_1g094215 42.003 619 347 4 30 643 9 620 1.87e-147 441
MS.gene023937.t1 MTR_7g059405 38.736 617 355 7 43 641 21 632 3.75e-127 389
MS.gene023937.t1 MTR_4g485520 39.005 623 332 12 54 643 41 648 1.26e-120 373
MS.gene023937.t1 MTR_1g094215 45.578 441 231 3 208 643 1 437 1.24e-113 348
MS.gene023937.t1 MTR_4g485520 48.031 381 187 3 272 643 102 480 1.20e-111 344
MS.gene023937.t1 MTR_5g083030 32.180 665 377 12 43 643 31 685 5.34e-94 305
MS.gene023937.t1 MTR_2g018010 34.831 623 372 17 53 643 55 675 2.91e-89 293
MS.gene023937.t1 MTR_7g053260 35.526 380 234 8 272 643 75 451 6.90e-66 224
MS.gene023937.t1 MTR_3g466220 48.921 278 141 1 365 642 529 805 2.83e-63 224
MS.gene023937.t1 MTR_3g466220 35.928 167 89 3 187 349 134 286 6.79e-25 110
MS.gene023937.t1 MTR_3g466220 48.921 278 141 1 365 642 550 826 3.00e-63 224
MS.gene023937.t1 MTR_3g466220 35.928 167 89 3 187 349 155 307 5.60e-25 110
MS.gene023937.t1 MTR_3g103050 39.286 308 168 3 355 643 23 330 2.16e-62 211
MS.gene023937.t1 MTR_1g069845 46.468 269 143 1 371 639 326 593 8.01e-62 216
MS.gene023937.t1 MTR_1g069845 26.598 485 272 12 203 639 62 510 8.43e-34 137
MS.gene023937.t1 MTR_1g018180 39.929 283 169 1 362 643 54 336 1.01e-61 209
MS.gene023937.t1 MTR_1g069845 46.642 268 142 1 371 638 447 713 3.12e-61 217
MS.gene023937.t1 MTR_1g069845 24.848 660 389 17 39 638 18 630 2.89e-36 145
MS.gene023937.t1 MTR_1g069845 46.642 268 142 1 371 638 443 709 4.90e-61 216
MS.gene023937.t1 MTR_1g069845 24.848 660 389 17 39 638 14 626 3.29e-36 145
MS.gene023937.t1 MTR_4g028960 31.111 585 364 13 86 643 93 665 6.34e-60 213
MS.gene023937.t1 MTR_7g116600 34.483 377 235 7 276 643 79 452 1.87e-59 206
MS.gene023937.t1 MTR_3g078160 26.935 620 416 14 52 642 46 657 3.69e-58 208
MS.gene023937.t1 MTR_3g078160 26.935 620 416 14 52 642 46 657 3.91e-58 208
MS.gene023937.t1 MTR_7g097020 44.068 295 156 2 352 638 458 751 1.12e-57 208
MS.gene023937.t1 MTR_7g097020 27.759 299 196 7 54 350 36 316 6.82e-22 101
MS.gene023937.t1 MTR_4g107010 26.527 622 417 14 52 642 52 664 5.02e-55 200
MS.gene023937.t1 MTR_2g026130 39.223 283 172 0 360 642 167 449 1.90e-52 187
MS.gene023937.t1 MTR_3g078160 28.457 499 325 11 52 526 46 536 3.19e-49 181
MS.gene023937.t1 MTR_8g080280 26.354 683 387 17 67 643 38 710 7.16e-48 180
MS.gene023937.t1 MTR_1g079450 33.333 378 239 7 272 639 60 434 9.91e-47 171
MS.gene023937.t1 MTR_3g085610 25.835 689 380 19 67 642 37 707 5.14e-45 172
MS.gene023937.t1 MTR_5g034440 26.772 635 408 15 46 641 48 664 3.49e-43 166
MS.gene023937.t1 MTR_2g011140 29.076 368 246 8 281 642 21 379 6.65e-34 134
MS.gene023937.t1 MTR_4g091880 30.263 380 236 10 275 642 5 367 1.91e-33 132
MS.gene023937.t1 MTR_4g091880 28.686 373 223 12 275 642 5 339 7.88e-32 127
MS.gene023937.t1 MTR_4g085720 31.347 386 238 11 275 642 14 390 4.74e-30 123
MS.gene023937.t1 MTR_1g093965 31.174 247 122 5 288 534 1 199 1.26e-27 110
MS.gene023937.t1 MTR_1g093965 38.679 106 45 1 485 570 90 195 4.65e-15 74.7
MS.gene023937.t1 MTR_8g077205 29.080 337 176 11 60 350 31 350 1.35e-27 119
MS.gene023937.t1 MTR_5g069340 33.333 282 183 4 366 642 32 313 3.01e-27 114
MS.gene023937.t1 MTR_5g048050 27.569 399 254 14 273 641 23 416 6.23e-27 114
MS.gene023937.t1 MTR_3g065080 25.217 345 229 8 241 568 9 341 1.23e-26 113
MS.gene023937.t1 MTR_3g106140 31.507 292 186 6 363 642 105 394 1.64e-26 114
MS.gene023937.t1 MTR_1g093995 30.769 247 123 5 288 534 1 199 2.63e-26 107
MS.gene023937.t1 MTR_1g093995 38.679 106 45 1 485 570 90 195 4.79e-15 74.7
MS.gene023937.t1 MTR_5g015210 26.178 382 239 8 275 636 67 425 4.70e-26 112
MS.gene023937.t1 MTR_6g071340 26.448 397 261 11 273 641 3 396 9.43e-26 110
MS.gene023937.t1 MTR_5g077510 23.858 394 267 13 273 641 33 418 1.04e-25 110
MS.gene023937.t1 MTR_7g106340 31.098 328 179 13 275 568 8 322 1.11e-24 107
MS.gene023937.t1 MTR_3g078340 29.310 290 188 6 361 642 206 486 1.92e-24 108
MS.gene023937.t1 MTR_1g056840 28.571 308 169 10 279 542 11 311 4.50e-23 102
MS.gene023937.t1 MTR_1g056880 27.184 412 242 15 279 640 11 414 4.52e-23 102
MS.gene023937.t1 MTR_6g008170 29.020 255 170 3 390 638 260 509 5.65e-23 103
MS.gene023937.t1 MTR_1g017770 25.330 379 251 8 275 636 45 408 9.55e-23 102
MS.gene023937.t1 MTR_1g056870 27.229 415 238 17 279 640 11 414 9.73e-23 102
MS.gene023937.t1 MTR_1g014420 29.779 272 177 6 383 642 144 413 2.68e-22 101
MS.gene023937.t1 MTR_8g077205 31.527 203 97 6 184 350 42 238 5.04e-22 101
MS.gene023937.t1 MTR_3g096370 27.321 377 226 12 271 615 6 366 1.06e-21 98.2
MS.gene023937.t1 MTR_7g117890 24.838 463 303 12 90 540 76 505 2.35e-20 96.7
MS.gene023937.t1 MTR_3g115670 26.409 337 173 8 275 537 30 365 6.93e-20 94.7
MS.gene023937.t1 MTR_3g095730 25.429 350 233 12 273 600 11 354 7.93e-20 92.8
MS.gene023937.t1 MTR_5g020570 38.393 112 60 1 267 378 265 367 1.77e-19 93.6
MS.gene023937.t1 MTR_5g020570 38.393 112 60 1 267 378 280 382 2.30e-19 93.2
MS.gene023937.t1 MTR_2g007630 33.061 245 111 8 288 530 1 194 2.80e-19 88.6
MS.gene023937.t1 MTR_1g056910 37.226 137 77 5 275 408 6 136 3.53e-19 90.9
MS.gene023937.t1 MTR_2g087350 29.643 280 180 9 275 542 6 280 1.01e-18 89.4
MS.gene023937.t1 MTR_8g092870 25.762 361 234 11 266 600 1 353 3.23e-18 87.8
MS.gene023937.t1 MTR_8g039560 26.389 288 194 7 364 634 4 290 5.05e-18 86.3
MS.gene023937.t1 MTR_8g027140 24.689 482 320 14 99 545 82 555 5.72e-18 89.0
MS.gene023937.t1 MTR_5g079550 29.197 274 177 7 379 642 31 297 6.90e-18 86.3
MS.gene023937.t1 MTR_8g103227 34.868 152 90 4 224 374 352 495 9.41e-18 88.2
MS.gene023937.t1 MTR_6g004790 27.660 282 189 7 371 642 5 281 2.78e-15 77.8
MS.gene023937.t1 MTR_1g100820 44.318 88 44 1 254 341 630 712 4.55e-15 79.3
MS.gene023937.t1 MTR_1g100820 44.318 88 44 1 254 341 632 714 4.60e-15 79.3
MS.gene023937.t1 MTR_1g094025 36.752 117 51 1 442 558 186 279 4.74e-15 76.6
MS.gene023937.t1 MTR_4g051515 35.616 146 87 4 275 417 6 147 6.41e-15 77.8
MS.gene023937.t1 MTR_5g032010 35.455 110 68 1 232 341 692 798 2.92e-14 76.6
MS.gene023937.t1 MTR_8g032570 27.737 274 191 7 371 641 224 493 4.82e-14 75.9
MS.gene023937.t1 MTR_8g032570 27.737 274 191 7 371 641 201 470 6.25e-14 75.5
MS.gene023937.t1 MTR_1g090320 46.479 71 37 1 276 345 514 584 6.41e-14 75.9
MS.gene023937.t1 MTR_1g090320 46.479 71 37 1 276 345 516 586 6.64e-14 75.9
MS.gene023937.t1 MTR_7g076220 28.571 259 177 6 379 634 167 420 3.41e-13 73.2
MS.gene023937.t1 MTR_7g077780 44.286 70 39 0 276 345 827 896 5.40e-13 72.8
MS.gene023937.t1 MTR_7g005940 42.169 83 44 2 263 341 580 662 6.22e-13 72.8
MS.gene023937.t1 MTR_7g005940 42.169 83 44 2 263 341 580 662 6.63e-13 72.8
MS.gene023937.t1 MTR_4g125930 42.169 83 46 2 259 341 476 556 7.47e-13 72.0
MS.gene023937.t1 MTR_4g125930 42.169 83 46 2 259 341 676 756 8.99e-13 72.0
MS.gene023937.t1 MTR_2g096850 47.761 67 35 0 275 341 589 655 3.31e-12 70.1
MS.gene023937.t1 MTR_3g096370 26.298 289 152 10 271 532 6 260 3.33e-12 68.2
MS.gene023937.t1 MTR_2g096850 47.761 67 35 0 275 341 740 806 3.39e-12 70.1
MS.gene023937.t1 MTR_7g007780 30.345 145 98 1 398 539 589 733 5.48e-12 69.7
MS.gene023937.t1 MTR_3g008270 39.394 99 42 4 258 341 700 795 5.63e-12 69.3
MS.gene023937.t1 MTR_3g067685 29.796 245 133 7 399 642 112 318 8.75e-12 67.8
MS.gene023937.t1 MTR_3g008280 45.455 66 35 1 276 341 732 796 8.91e-12 68.9
MS.gene023937.t1 MTR_3g008280 45.455 66 35 1 276 341 740 804 9.43e-12 68.9
MS.gene023937.t1 MTR_1g076400 24.189 339 221 7 234 540 220 554 2.74e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene023937.t1 AT5G42340 61.138 615 225 4 32 643 53 656 0.0 723
MS.gene023937.t1 AT3G46510 43.994 616 333 4 39 643 15 629 4.42e-169 498
MS.gene023937.t1 AT3G54850 39.482 618 352 5 33 643 20 622 1.17e-142 429
MS.gene023937.t1 AT2G28830 42.096 563 304 9 102 643 1 562 5.41e-136 410
MS.gene023937.t1 AT1G23030 37.520 621 367 9 29 643 4 609 9.39e-120 369
MS.gene023937.t1 AT1G71020 36.760 642 356 12 28 643 3 620 1.93e-112 351
MS.gene023937.t1 AT1G71020 44.792 384 203 3 269 643 89 472 1.80e-101 318
MS.gene023937.t1 AT1G29340 34.028 576 348 15 97 643 115 687 2.41e-78 264
MS.gene023937.t1 AT3G07360 37.795 381 221 9 276 643 75 452 2.61e-72 241
MS.gene023937.t1 AT2G23140 46.975 281 148 1 362 642 348 627 3.97e-67 231
MS.gene023937.t1 AT2G23140 51.220 82 40 0 269 350 35 116 1.46e-23 105
MS.gene023937.t1 AT2G23140 46.975 281 148 1 362 642 348 627 3.97e-67 231
MS.gene023937.t1 AT2G23140 51.220 82 40 0 269 350 35 116 1.46e-23 105
MS.gene023937.t1 AT2G23140 46.975 281 148 1 362 642 540 819 6.44e-66 232
MS.gene023937.t1 AT2G23140 51.220 82 40 0 269 350 227 308 1.66e-23 106
MS.gene023937.t1 AT2G23140 46.975 281 148 1 362 642 537 816 7.06e-66 232
MS.gene023937.t1 AT2G23140 51.220 82 40 0 269 350 224 305 1.73e-23 106
MS.gene023937.t1 AT2G23140 46.975 281 148 1 362 642 537 816 7.06e-66 232
MS.gene023937.t1 AT2G23140 51.220 82 40 0 269 350 224 305 1.73e-23 106
MS.gene023937.t1 AT5G01830 29.623 557 364 11 100 643 104 645 2.82e-62 219
MS.gene023937.t1 AT3G01400 39.789 284 169 2 362 643 57 340 1.23e-59 204
MS.gene023937.t1 AT5G67340 41.254 303 174 4 343 642 396 697 3.60e-58 208
MS.gene023937.t1 AT5G67340 27.649 387 246 9 275 640 240 613 2.86e-33 136
MS.gene023937.t1 AT5G67340 41.254 303 174 4 343 642 396 697 3.60e-58 208
MS.gene023937.t1 AT5G67340 27.649 387 246 9 275 640 240 613 2.86e-33 136
MS.gene023937.t1 AT3G54790 46.468 269 142 2 371 638 441 708 4.38e-56 203
MS.gene023937.t1 AT3G54790 33.146 178 97 4 186 358 123 283 5.25e-20 95.1
MS.gene023937.t1 AT3G54790 46.468 269 142 2 371 638 477 744 6.01e-56 203
MS.gene023937.t1 AT3G54790 33.146 178 97 4 186 358 159 319 5.87e-20 95.1
MS.gene023937.t1 AT3G54790 46.468 269 142 2 371 638 477 744 6.01e-56 203
MS.gene023937.t1 AT3G54790 33.146 178 97 4 186 358 159 319 5.87e-20 95.1
MS.gene023937.t1 AT1G27910 28.134 686 373 17 63 642 32 703 1.81e-55 202
MS.gene023937.t1 AT5G58680 39.033 269 163 1 376 643 71 339 8.61e-55 191
MS.gene023937.t1 AT4G16490 37.193 285 177 1 360 642 177 461 3.85e-47 173
MS.gene023937.t1 AT1G60190 28.183 589 388 17 80 641 82 662 2.02e-46 175
MS.gene023937.t1 AT3G07360 35.000 320 192 9 337 643 1 317 2.56e-45 164
MS.gene023937.t1 AT3G07360 35.000 320 192 9 337 643 1 317 2.56e-45 164
MS.gene023937.t1 AT3G07360 35.000 320 192 9 337 643 1 317 2.56e-45 164
MS.gene023937.t1 AT3G07360 35.000 320 192 9 337 643 1 317 2.56e-45 164
MS.gene023937.t1 AT3G07360 35.000 320 192 9 337 643 1 317 2.56e-45 164
MS.gene023937.t1 AT3G07360 35.000 320 192 9 337 643 1 317 2.56e-45 164
MS.gene023937.t1 AT3G07360 35.000 320 192 9 337 643 1 317 2.56e-45 164
MS.gene023937.t1 AT3G07360 35.000 320 192 9 337 643 1 317 2.56e-45 164
MS.gene023937.t1 AT3G07360 35.000 320 192 9 337 643 1 317 2.56e-45 164
MS.gene023937.t1 AT5G18320 31.771 384 240 8 275 643 72 448 4.06e-45 167
MS.gene023937.t1 AT1G24330 25.404 681 392 17 67 642 36 705 3.77e-44 169
MS.gene023937.t1 AT1G24330 25.404 681 392 17 67 642 36 705 3.77e-44 169
MS.gene023937.t1 AT1G67530 25.473 687 385 19 67 642 36 706 3.74e-41 160
MS.gene023937.t1 AT1G67530 25.473 687 385 19 67 642 36 706 3.74e-41 160
MS.gene023937.t1 AT1G67530 25.473 687 385 19 67 642 36 706 3.74e-41 160
MS.gene023937.t1 AT4G21350 33.243 367 235 7 275 638 5 364 1.37e-40 152
MS.gene023937.t1 AT1G10560 26.125 578 384 15 100 641 103 673 2.65e-40 157
MS.gene023937.t1 AT3G19380 30.570 386 239 10 262 625 1 379 1.57e-37 145
MS.gene023937.t1 AT1G49780 29.412 408 252 10 262 642 1 399 5.87e-35 137
MS.gene023937.t1 AT1G67530 30.149 335 184 8 67 366 36 355 6.30e-35 139
MS.gene023937.t1 AT5G18330 28.212 397 241 13 275 643 65 445 1.19e-30 125
MS.gene023937.t1 AT5G18340 30.931 333 206 12 270 585 69 394 1.38e-28 119
MS.gene023937.t1 AT5G62560 31.890 254 166 3 390 638 258 509 2.81e-27 117
MS.gene023937.t1 AT5G40140 29.964 277 186 4 371 642 233 506 2.20e-26 114
MS.gene023937.t1 AT5G65920 27.346 373 246 9 275 636 60 418 1.96e-25 110
MS.gene023937.t1 AT5G65920 27.346 373 246 9 275 636 60 418 1.96e-25 110
MS.gene023937.t1 AT1G66160 27.848 395 242 15 273 643 31 406 4.51e-25 108
MS.gene023937.t1 AT5G65200 29.492 295 192 5 359 642 220 509 2.59e-24 107
MS.gene023937.t1 AT2G35930 27.597 308 202 10 275 567 12 313 1.06e-23 104
MS.gene023937.t1 AT4G31890 30.741 270 170 7 386 642 163 428 1.45e-23 105
MS.gene023937.t1 AT4G31890 30.741 270 170 7 386 642 163 428 1.45e-23 105
MS.gene023937.t1 AT4G31890 30.741 270 170 7 386 642 163 428 1.45e-23 105
MS.gene023937.t1 AT5G37490 25.000 396 261 13 271 641 27 411 1.14e-21 98.6
MS.gene023937.t1 AT4G12710 32.117 274 175 8 379 642 58 330 3.20e-21 97.1
MS.gene023937.t1 AT3G49810 25.203 369 259 7 275 636 64 422 3.82e-21 97.4
MS.gene023937.t1 AT1G76390 28.571 315 189 8 275 555 25 337 4.90e-21 98.6
MS.gene023937.t1 AT1G76390 28.571 315 189 8 275 555 25 337 4.90e-21 98.6
MS.gene023937.t1 AT3G52450 41.860 129 68 4 275 401 7 130 1.29e-20 95.5
MS.gene023937.t1 AT1G20780 28.750 320 182 10 275 555 23 335 1.48e-20 97.1
MS.gene023937.t1 AT1G20780 28.750 320 182 10 275 555 23 335 1.48e-20 97.1
MS.gene023937.t1 AT1G20780 28.750 320 182 10 275 555 23 335 1.48e-20 97.1
MS.gene023937.t1 AT3G47820 33.480 227 141 4 424 642 263 487 3.23e-20 95.1
MS.gene023937.t1 AT5G09800 24.638 345 230 10 275 600 11 344 2.03e-19 91.7
MS.gene023937.t1 AT3G18710 27.077 325 204 13 267 568 1 315 3.86e-19 90.9
MS.gene023937.t1 AT2G25130 28.464 267 173 7 390 642 133 395 5.30e-19 90.9
MS.gene023937.t1 AT4G36550 26.207 290 188 7 60 347 26 291 7.01e-19 91.7
MS.gene023937.t1 AT5G14510 31.930 285 179 9 366 642 2 279 2.40e-18 87.0
MS.gene023937.t1 AT5G64660 25.172 290 178 8 273 556 8 264 1.24e-17 86.3
MS.gene023937.t1 AT1G08315 24.667 300 205 9 362 641 3 301 7.46e-17 82.8
MS.gene023937.t1 AT2G45920 50.000 66 33 0 276 341 326 391 3.17e-16 81.6
MS.gene023937.t1 AT1G01680 50.000 72 35 1 278 348 236 307 4.28e-16 80.1
MS.gene023937.t1 AT3G03440 28.788 264 179 4 386 642 84 345 9.88e-16 80.1
MS.gene023937.t1 AT3G61390 50.000 66 33 0 276 341 279 344 3.23e-15 78.2
MS.gene023937.t1 AT3G61390 50.000 66 33 0 276 341 354 419 5.40e-15 78.2
MS.gene023937.t1 AT3G11840 51.389 72 33 2 275 345 10 80 8.22e-15 77.8
MS.gene023937.t1 AT1G56040 53.846 65 30 0 276 340 354 418 1.22e-14 77.0
MS.gene023937.t1 AT3G60350 34.307 137 87 1 406 539 599 735 2.06e-14 77.4
MS.gene023937.t1 AT3G60350 34.307 137 87 1 406 539 599 735 2.06e-14 77.4
MS.gene023937.t1 AT1G01660 34.058 138 66 3 222 346 443 568 2.66e-14 76.6
MS.gene023937.t1 AT2G45910 44.304 79 44 0 267 345 755 833 2.69e-14 77.0
MS.gene023937.t1 AT2G45910 44.304 79 44 0 267 345 755 833 2.69e-14 77.0
MS.gene023937.t1 AT1G01660 34.058 138 66 3 222 346 444 569 2.73e-14 76.6
MS.gene023937.t1 AT2G44900 32.432 148 96 2 396 539 597 744 5.89e-14 75.9
MS.gene023937.t1 AT2G44900 32.432 148 96 2 396 539 597 744 5.89e-14 75.9
MS.gene023937.t1 AT1G66160 24.557 395 239 16 273 643 31 390 1.05e-13 73.9
MS.gene023937.t1 AT5G65500 35.036 137 72 3 212 341 663 789 1.32e-13 74.7
MS.gene023937.t1 AT5G65500 35.036 137 72 3 212 341 655 781 1.32e-13 74.7
MS.gene023937.t1 AT1G56030 46.154 65 35 0 276 340 324 388 9.58e-13 70.9
MS.gene023937.t1 AT5G51270 42.857 70 39 1 276 345 736 804 1.82e-12 71.2
MS.gene023937.t1 AT5G51270 42.857 70 39 1 276 345 736 804 1.82e-12 71.2
MS.gene023937.t1 AT2G19410 40.476 84 49 1 264 347 700 782 4.41e-12 69.7
MS.gene023937.t1 AT2G19410 40.476 84 49 1 264 347 714 796 5.06e-12 69.7
MS.gene023937.t1 AT5G57035 45.455 66 36 0 276 341 709 774 5.20e-12 69.7
MS.gene023937.t1 AT2G19410 42.308 78 44 1 264 341 735 811 5.31e-12 69.7
MS.gene023937.t1 AT2G45720 26.336 262 185 4 379 638 162 417 2.07e-11 67.4
MS.gene023937.t1 AT2G45720 26.336 262 185 4 379 638 162 417 2.07e-11 67.4
MS.gene023937.t1 AT2G45720 26.336 262 185 4 379 638 162 417 2.07e-11 67.4
MS.gene023937.t1 AT2G45720 26.336 262 185 4 379 638 162 417 2.07e-11 67.4
MS.gene023937.t1 AT2G45720 26.336 262 185 4 379 638 162 417 2.07e-11 67.4
MS.gene023937.t1 AT5G61560 31.667 120 65 3 225 341 683 788 2.38e-11 67.4
MS.gene023937.t1 AT3G49060 45.455 66 36 0 276 341 726 791 2.38e-11 67.4
MS.gene023937.t1 AT3G49060 45.455 66 36 0 276 341 736 801 2.43e-11 67.4
MS.gene023937.t1 AT5G61560 31.667 120 65 3 225 341 685 790 2.48e-11 67.4
MS.gene023937.t1 AT5G61560 31.667 120 65 3 225 341 685 790 2.48e-11 67.4
MS.gene023937.t1 AT5G61560 31.667 120 65 3 225 341 704 809 2.49e-11 67.4
MS.gene023937.t1 AT5G61560 31.667 120 65 3 225 341 704 809 2.49e-11 67.4
MS.gene023937.t1 AT3G49060 45.455 66 36 0 276 341 703 768 2.64e-11 67.4
MS.gene023937.t1 AT5G50900 28.488 172 121 1 371 540 149 320 3.86e-11 66.6
MS.gene023937.t1 AT1G68940 25.641 234 148 6 266 491 288 503 4.11e-11 67.0
MS.gene023937.t1 AT1G68940 25.641 234 148 6 266 491 235 450 4.75e-11 66.6
MS.gene023937.t1 AT4G25160 41.026 78 43 2 264 341 757 831 4.76e-11 66.6
MS.gene023937.t1 AT1G68940 25.641 234 148 6 266 491 288 503 5.00e-11 66.6

Find 113 sgRNAs with CRISPR-Local

Find 198 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACATAATTTCAAGTGTTAT+TGG 0.211508 7.4:+27925393 None:intergenic
CAAACACATGTTGCCTCTTA+TGG 0.212487 7.4:-27926888 MS.gene023937:CDS
CCAAACATGGAATTTCTTCT+TGG 0.230264 7.4:+27924649 None:intergenic
AGCTTTACTTCAATTGTTAA+AGG 0.235604 7.4:-27924139 MS.gene023937:CDS
GCTGCACATTCCTTATTCTT+TGG 0.276074 7.4:+27923985 None:intergenic
ATAATAGAAGTGTTGGAAAA+TGG 0.285128 7.4:-27924381 MS.gene023937:CDS
CCAAGAAGAAATTCCATGTT+TGG 0.295569 7.4:-27924649 MS.gene023937:CDS
TGTAATAAATTTACCAAAGC+TGG 0.326531 7.4:+27924264 None:intergenic
TTGGTAAATTTATTACAAAA+TGG 0.326549 7.4:-27924258 MS.gene023937:CDS
GCTTGGAAGAAGCACTTCTT+TGG 0.328604 7.4:-27925439 MS.gene023937:CDS
CTTCTTCCAAGCATCTTATT+AGG 0.336614 7.4:+27925450 None:intergenic
TTCCTCGAAACGGCGTTGTT+TGG 0.340973 7.4:-27926838 MS.gene023937:CDS
TTACAAAATGGAACAGTTAG+AGG 0.342439 7.4:-27924246 MS.gene023937:CDS
AGAAGGGACTCCAAAGAATA+AGG 0.346244 7.4:-27923995 MS.gene023937:CDS
CCAACCTCATGCCTCCCTTC+AGG 0.349557 7.4:+27924057 None:intergenic
TTCAGCAATTAAATTTCTTA+AGG 0.357358 7.4:+27924743 None:intergenic
CGAAGAAAAGCGCATCTCTA+AGG 0.359752 7.4:+27926807 None:intergenic
GGTGTGCCTTGTGATGAATT+AGG 0.367708 7.4:-27926488 MS.gene023937:CDS
GTCAAATGGGATTCCAGCTT+TGG 0.381074 7.4:-27924277 MS.gene023937:CDS
GTGTGCCTTGTGATGAATTA+GGG 0.381169 7.4:-27926487 MS.gene023937:CDS
TCCGAAGACAAGGCAGCCTT+TGG 0.394785 7.4:-27924793 MS.gene023937:CDS
ATTGAATCGGTGGTTCAATT+CGG 0.409503 7.4:-27926962 MS.gene023937:CDS
AACCAAACAACGCCGTTTCG+AGG 0.411594 7.4:+27926836 None:intergenic
AAATTTCTTAAGGCACAGTT+TGG 0.411871 7.4:+27924753 None:intergenic
TGGCCACTTGCAATAATAAC+AGG 0.415456 7.4:+27925366 None:intergenic
ACTTTGGCAGCACTTCAGTT+TGG 0.417472 7.4:-27923922 MS.gene023937:CDS
TCCAAAGGCTGCCTTGTCTT+CGG 0.419783 7.4:+27924792 None:intergenic
ACAACGCCGTTTCGAGGAAC+AGG 0.427957 7.4:+27926842 None:intergenic
GAGGTTGTAGGAGTGTCAAA+TGG 0.430268 7.4:-27924291 MS.gene023937:CDS
GATGAAAATAAAGAGGTTGT+AGG 0.431054 7.4:-27924303 MS.gene023937:CDS
TAGCTCTCTCTTTATTTGCA+TGG 0.433322 7.4:+27924181 None:intergenic
ATTGTTAAAGGACAGAAACT+TGG 0.435496 7.4:-27924127 MS.gene023937:CDS
GCCATGCCTAATAAGATGCT+TGG 0.439094 7.4:-27925456 MS.gene023937:CDS
TCCAACACTTCTATTATAGC+TGG 0.443786 7.4:+27924387 None:intergenic
CTTGTTGAGTTTACTAGAGA+AGG 0.448455 7.4:-27924012 MS.gene023937:CDS
TTCTGATGAAGTAAAAGAAC+AGG 0.452149 7.4:-27926462 MS.gene023937:intron
TAAGAAATTTAATTGCTGAA+TGG 0.452536 7.4:-27924740 MS.gene023937:CDS
CAATGGTGTGGTGGTGGTGG+AGG 0.458616 7.4:-27926999 MS.gene023937:CDS
ATGCAATGGTGTGGTGGTGG+TGG 0.460589 7.4:-27927002 MS.gene023937:CDS
AACCTTGTTAGAGAAAGAAA+AGG 0.469867 7.4:-27925579 MS.gene023937:CDS
CCACCGATTCAATGAGTCCT+TGG 0.474954 7.4:+27926972 None:intergenic
TCCAGCTATAATAGAAGTGT+TGG 0.478569 7.4:-27924388 MS.gene023937:CDS
GAAACGGCGTTGTTTGGTTG+AGG 0.484598 7.4:-27926832 MS.gene023937:CDS
CCTTTCGATAATGGCACTAT+CGG 0.487902 7.4:+27925665 None:intergenic
GAGGTAGAAACATTGGCTGT+TGG 0.489533 7.4:-27925603 MS.gene023937:CDS
AAAGAGAGAGCTATAAAAGC+TGG 0.489962 7.4:-27924171 MS.gene023937:CDS
AGGCTGCCTTGTCTTCGGAC+AGG 0.490475 7.4:+27924797 None:intergenic
TATGATAGGATTTGTACTAA+TGG 0.494085 7.4:+27924507 None:intergenic
AGCTAATGCACGTGCAACTC+AGG 0.495077 7.4:-27925773 MS.gene023937:CDS
TGTTATTATTGCAAGTGGCC+AGG 0.495390 7.4:-27925364 MS.gene023937:intron
TCCAAGCATCTTATTAGGCA+TGG 0.497480 7.4:+27925455 None:intergenic
AGGTTGTAGGAGTGTCAAAT+GGG 0.498394 7.4:-27924290 MS.gene023937:CDS
CTACTTGTGTTAACTCCTGA+AGG 0.498929 7.4:-27924072 MS.gene023937:CDS
TTGATTGAGATTAAAGAAAG+TGG 0.499336 7.4:-27923886 MS.gene023937:CDS
TCACGAAGGTCTTCCATAAG+AGG 0.499928 7.4:+27926875 None:intergenic
ACCTTCTTAACAGATTCAAA+AGG 0.513046 7.4:-27925524 MS.gene023937:CDS
AATGATTGATGAAAATAAAG+AGG 0.519990 7.4:-27924310 MS.gene023937:CDS
AACAGATTCAAAAGGACTGC+AGG 0.520736 7.4:-27925516 MS.gene023937:CDS
AGAGCTAGCAATGGATATGA+TGG 0.525717 7.4:-27925718 MS.gene023937:CDS
ATTCAAAAGGACTGCAGGCA+TGG 0.529095 7.4:-27925511 MS.gene023937:CDS
TCCATCAAAGACATATGAAA+GGG 0.529147 7.4:-27924856 MS.gene023937:intron
CATCATCCTGTTCCTCGAAA+CGG 0.531583 7.4:-27926848 MS.gene023937:CDS
TTGTTGAGTTTACTAGAGAA+GGG 0.533693 7.4:-27924011 MS.gene023937:CDS
TTCCATCAAAGACATATGAA+AGG 0.536197 7.4:-27924857 MS.gene023937:intron
GATCCAAGGACTCATTGAAT+CGG 0.548729 7.4:-27926975 MS.gene023937:CDS
TACAAAATGGAACAGTTAGA+GGG 0.549728 7.4:-27924245 MS.gene023937:CDS
CAACTTAGAACATCAAAGAA+AGG 0.556469 7.4:-27924607 MS.gene023937:CDS
GTTCTAAGTTGATCGACGAT+AGG 0.558574 7.4:+27924619 None:intergenic
TTAGGCATGGGAAGGTGAGA+TGG 0.558729 7.4:-27926561 MS.gene023937:intron
AGAATGCAATGGTGTGGTGG+TGG 0.564838 7.4:-27927005 MS.gene023937:CDS
TTGTTAAAGGACAGAAACTT+GGG 0.566313 7.4:-27924126 MS.gene023937:CDS
ACCTTGTTAGAGAAAGAAAA+GGG 0.568955 7.4:-27925578 MS.gene023937:CDS
GATCCTGTTATTATTGCAAG+TGG 0.569659 7.4:-27925369 MS.gene023937:CDS
GGATCTTGAGGTAGAAACAT+TGG 0.571196 7.4:-27925610 MS.gene023937:CDS
AATGGAAGGAACAGAAGAGA+GGG 0.575343 7.4:-27927080 MS.gene023937:CDS
GGTTATGATCAAATTTCAGA+AGG 0.576249 7.4:-27926540 MS.gene023937:CDS
CCTGAAGGGAGGCATGAGGT+TGG 0.577701 7.4:-27924057 MS.gene023937:CDS
TTGTTGAAATTGTGTAGCCA+AGG 0.579205 7.4:-27926776 MS.gene023937:CDS
GATAGGATTTGTACTAATGG+TGG 0.579251 7.4:+27924510 None:intergenic
TCACAGTGTTGAGGATCTTG+AGG 0.580007 7.4:-27925622 MS.gene023937:CDS
ACGTGCAACTCAGGAGGGCA+AGG 0.580025 7.4:-27925764 MS.gene023937:CDS
AAGGCACACCATCAAAAGCT+TGG 0.581211 7.4:+27926501 None:intergenic
GTTGGAAAATGGAAGTATTG+TGG 0.585943 7.4:-27924370 MS.gene023937:CDS
AACAGGTGACTTTCAATGGA+AGG 0.586665 7.4:-27927094 None:intergenic
ACAAAACCTGTCCGAAGACA+AGG 0.586908 7.4:-27924803 MS.gene023937:CDS
GGAAGGAACAGAAGAGAGGG+AGG 0.596520 7.4:-27927077 MS.gene023937:CDS
TTCGAGGAACAGGATGATGA+AGG 0.600018 7.4:+27926852 None:intergenic
GTTGGAGCTTCACAGTGTTG+AGG 0.602329 7.4:-27925631 MS.gene023937:CDS
TAATGCACGTGCAACTCAGG+AGG 0.604700 7.4:-27925770 MS.gene023937:CDS
CCAAGGACTCATTGAATCGG+TGG 0.611282 7.4:-27926972 MS.gene023937:CDS
TGTGTTTGAAACGACGAGCG+AGG 0.614739 7.4:+27926903 None:intergenic
TACTTGTGTTAACTCCTGAA+GGG 0.615594 7.4:-27924071 MS.gene023937:CDS
AAAGGGAAAGCATAGAGAAG+TGG 0.617041 7.4:-27924839 MS.gene023937:CDS
CCGATAGTGCCATTATCGAA+AGG 0.622407 7.4:-27925665 MS.gene023937:CDS
CAATGGAAGGAACAGAAGAG+AGG 0.623216 7.4:-27927081 MS.gene023937:CDS
AGAAGAATGCAATGGTGTGG+TGG 0.641470 7.4:-27927008 MS.gene023937:CDS
ACAAGACATAGAGCTAGCAA+TGG 0.643295 7.4:-27925727 MS.gene023937:CDS
AATGCACGTGCAACTCAGGA+GGG 0.649570 7.4:-27925769 MS.gene023937:CDS
GTGGTGGTGGAGGAGATCCA+AGG 0.649832 7.4:-27926989 MS.gene023937:CDS
AGAACCAGAATCAAGCAACC+CGG 0.656438 7.4:-27927047 MS.gene023937:CDS
AACTCCTGAAGGGAGGCATG+AGG 0.660040 7.4:-27924061 MS.gene023937:CDS
ATCATCATCAAAGATAACAT+CGG 0.668304 7.4:+27925482 None:intergenic
AATGAAGAAGAAGAATGCAA+TGG 0.671502 7.4:-27927016 MS.gene023937:CDS
GCTAATTGAAGATGTTCCAA+AGG 0.672940 7.4:+27924777 None:intergenic
GAAATCCCTAATTCATCACA+AGG 0.673692 7.4:+27926482 None:intergenic
TTGTGTTAACTCCTGAAGGG+AGG 0.688054 7.4:-27924068 MS.gene023937:CDS
CAGGATGATGAAGGTCACGA+AGG 0.693076 7.4:+27926861 None:intergenic
ATTGGACACAGAAACTCATG+AGG 0.705096 7.4:+27925411 None:intergenic
GTGGTACAAATAGAGCACAA+AGG 0.710749 7.4:-27923867 MS.gene023937:CDS
CTTAGAACATCAAAGAAAGG+CGG 0.713277 7.4:-27924604 MS.gene023937:CDS
GCTAGCAATGGATATGATGG+TGG 0.719121 7.4:-27925715 MS.gene023937:CDS
AGAAGAAGAATGCAATGGTG+TGG 0.735055 7.4:-27927011 MS.gene023937:CDS
GCGAATACAGAAGAACACAA+AGG 0.740376 7.4:-27926940 MS.gene023937:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAACTTATATCAAAAGA+AGG - chr7.4:27926495-27926514 MS.gene023937:CDS 15.0%
!! TCAATATATAATTATGTGTA+TGG - chr7.4:27924548-27924567 MS.gene023937:CDS 15.0%
!! TGAAATAATGTTATATACTT+TGG - chr7.4:27925102-27925121 MS.gene023937:intron 15.0%
!! TTCGTATTATAAATTTGATT+CGG - chr7.4:27925739-27925758 MS.gene023937:CDS 15.0%
!! TTGGTAAATTTATTACAAAA+TGG - chr7.4:27926654-27926673 MS.gene023937:intron 15.0%
!! AATGATTGATGAAAATAAAG+AGG - chr7.4:27926602-27926621 MS.gene023937:intron 20.0%
!! ACTAGTCATATTTATGAAAA+TGG - chr7.4:27925637-27925656 MS.gene023937:CDS 20.0%
!! CTATATAATAATGCTAACAA+AGG - chr7.4:27925995-27926014 MS.gene023937:intron 20.0%
!! TAAGAAATTTAATTGCTGAA+TGG - chr7.4:27926172-27926191 MS.gene023937:intron 20.0%
!! TATTGAATAAATGGTGTATT+TGG + chr7.4:27924846-27924865 None:intergenic 20.0%
!! TGCTTTAATAATTACACATT+TGG - chr7.4:27924886-27924905 MS.gene023937:intron 20.0%
!! TTCAGCAATTAAATTTCTTA+AGG + chr7.4:27926172-27926191 None:intergenic 20.0%
!! TTGTAGGTTTATTGAATAAA+TGG + chr7.4:27924855-27924874 None:intergenic 20.0%
!!! AAAAGTGTAATTATTAAGAG+CGG + chr7.4:27924752-27924771 None:intergenic 20.0%
!!! AAGTAATTCATCTTTTACTT+TGG - chr7.4:27926974-27926993 MS.gene023937:CDS 20.0%
!!! AATTGAATAACTGAAGTATT+TGG - chr7.4:27924807-27924826 MS.gene023937:CDS 20.0%
!!! ATTGAATAACTGAAGTATTT+TGG - chr7.4:27924808-27924827 MS.gene023937:CDS 20.0%
!!! CAATTTTAGATCTCATAAAA+AGG - chr7.4:27927078-27927097 MS.gene023937:CDS 20.0%
!!! TCTATGATTTCTCTTTTTTA+AGG - chr7.4:27924249-27924268 MS.gene023937:CDS 20.0%
!!! TGATTATGTTTTGATGAATA+GGG - chr7.4:27924299-27924318 MS.gene023937:CDS 20.0%
!!! TGTTCTTTTATTTTTGAATC+TGG + chr7.4:27926432-27926451 None:intergenic 20.0%
!!! TTGATTATGTTTTGATGAAT+AGG - chr7.4:27924298-27924317 MS.gene023937:CDS 20.0%
! AGCTTTACTTCAATTGTTAA+AGG - chr7.4:27926773-27926792 MS.gene023937:CDS 25.0%
! ATCATCATCAAAGATAACAT+CGG + chr7.4:27925433-27925452 None:intergenic 25.0%
! ATTTCTCACTCTTAATCTAA+CGG - chr7.4:27925873-27925892 MS.gene023937:intron 25.0%
! TATGATAGGATTTGTACTAA+TGG + chr7.4:27926408-27926427 None:intergenic 25.0%
! TATTGAATAACTGGTGTATT+TGG + chr7.4:27924982-27925001 None:intergenic 25.0%
! TGTAATAAATTTACCAAAGC+TGG + chr7.4:27926651-27926670 None:intergenic 25.0%
! TTGATTGAGATTAAAGAAAG+TGG - chr7.4:27927026-27927045 MS.gene023937:CDS 25.0%
! TTGTAGGTTTATTGAATAAC+TGG + chr7.4:27924991-27925010 None:intergenic 25.0%
!! GACATAATTTCAAGTGTTAT+TGG + chr7.4:27925522-27925541 None:intergenic 25.0%
!! GCTCTTAATAATTACACTTT+TGG - chr7.4:27924751-27924770 MS.gene023937:CDS 25.0%
!! TTGTTGCTTATAATAGTGAT+CGG - chr7.4:27925018-27925037 MS.gene023937:intron 25.0%
!! TTTTTGAATCTGGATATGAT+AGG + chr7.4:27926422-27926441 None:intergenic 25.0%
!!! AACTTTCTTTTGATAACATG+CGG + chr7.4:27926344-27926363 None:intergenic 25.0%
!!! AAGCAACAAATCATTTTTGT+AGG + chr7.4:27924871-27924890 None:intergenic 25.0%
!!! AAGTTTGTTTGTTATTTACG+AGG + chr7.4:27924174-27924193 None:intergenic 25.0%
!!! ATAATAGAAGTGTTGGAAAA+TGG - chr7.4:27926531-27926550 MS.gene023937:CDS 25.0%
!!! TCTTTTTTTTCTTGCGTTTT+AGG - chr7.4:27924333-27924352 MS.gene023937:CDS 25.0%
AAATTTCTTAAGGCACAGTT+TGG + chr7.4:27926162-27926181 None:intergenic 30.0%
AACCTTGTTAGAGAAAGAAA+AGG - chr7.4:27925333-27925352 MS.gene023937:intron 30.0%
AATGAAGAAGAAGAATGCAA+TGG - chr7.4:27923896-27923915 MS.gene023937:CDS 30.0%
AATGCATGTATTTGTGAATG+CGG + chr7.4:27924616-27924635 None:intergenic 30.0%
ACCTTCTTAACAGATTCAAA+AGG - chr7.4:27925388-27925407 MS.gene023937:CDS 30.0%
ACCTTGTTAGAGAAAGAAAA+GGG - chr7.4:27925334-27925353 MS.gene023937:intron 30.0%
ATTGTTAAAGGACAGAAACT+TGG - chr7.4:27926785-27926804 MS.gene023937:CDS 30.0%
CAACTTAGAACATCAAAGAA+AGG - chr7.4:27926305-27926324 MS.gene023937:intron 30.0%
GATGAAAATAAAGAGGTTGT+AGG - chr7.4:27926609-27926628 MS.gene023937:intron 30.0%
GGTTATGATCAAATTTCAGA+AGG - chr7.4:27924372-27924391 MS.gene023937:CDS 30.0%
TACAAAATGGAACAGTTAGA+GGG - chr7.4:27926667-27926686 MS.gene023937:intron 30.0%
TCCATCAAAGACATATGAAA+GGG - chr7.4:27926056-27926075 MS.gene023937:intron 30.0%
TTACAAAATGGAACAGTTAG+AGG - chr7.4:27926666-27926685 MS.gene023937:intron 30.0%
TTCCATCAAAGACATATGAA+AGG - chr7.4:27926055-27926074 MS.gene023937:intron 30.0%
TTCTGATGAAGTAAAAGAAC+AGG - chr7.4:27924450-27924469 MS.gene023937:CDS 30.0%
TTGTTAAAGGACAGAAACTT+GGG - chr7.4:27926786-27926805 MS.gene023937:CDS 30.0%
TTGTTGAGTTTACTAGAGAA+GGG - chr7.4:27926901-27926920 MS.gene023937:CDS 30.0%
TTTCACATTTAAGCCTAAGT+TGG - chr7.4:27925608-27925627 MS.gene023937:CDS 30.0%
! AAATTAAGCCAAGCTTTTGA+TGG - chr7.4:27924403-27924422 MS.gene023937:CDS 30.0%
! ATCTGGAATGAAGAAAACTT+AGG - chr7.4:27925964-27925983 MS.gene023937:intron 30.0%
! TCCTTTTGAATCTGTTAAGA+AGG + chr7.4:27925392-27925411 None:intergenic 30.0%
! TCTTCTTCATTCTCATTTTC+CGG + chr7.4:27923887-27923906 None:intergenic 30.0%
! TGACATGAAGAACAGATTTT+TGG + chr7.4:27926222-27926241 None:intergenic 30.0%
! TTATGAAAATGGATTCGATG+CGG - chr7.4:27925648-27925667 MS.gene023937:CDS 30.0%
!! TGGAATTTCTTCTTGGTTTT+CGG + chr7.4:27926259-27926278 None:intergenic 30.0%
!! TTCTGAAATCCAATCATCTA+CGG - chr7.4:27925815-27925834 MS.gene023937:intron 30.0%
!!! ATGGAACCCTTATTTTATTC+CGG - chr7.4:27924567-27924586 MS.gene023937:CDS 30.0%
AAAGAGAGAGCTATAAAAGC+TGG - chr7.4:27926741-27926760 MS.gene023937:intron 35.0%
ACCTTGCCGGAATAAAATAA+GGG + chr7.4:27924576-27924595 None:intergenic 35.0%
ACTACTAGCAACATAGTGAT+CGG + chr7.4:27925057-27925076 None:intergenic 35.0%
ACTGTTGCATACATATTGGA+CGG - chr7.4:27925703-27925722 MS.gene023937:CDS 35.0%
ATTGAATCGGTGGTTCAATT+CGG - chr7.4:27923950-27923969 MS.gene023937:CDS 35.0%
CACAAATACATGCATTCACA+TGG - chr7.4:27924620-27924639 MS.gene023937:CDS 35.0%
CCAAACATGGAATTTCTTCT+TGG + chr7.4:27926266-27926285 None:intergenic 35.0%
CCAAGAAGAAATTCCATGTT+TGG - chr7.4:27926263-27926282 MS.gene023937:intron 35.0%
CTTAGAACATCAAAGAAAGG+CGG - chr7.4:27926308-27926327 MS.gene023937:intron 35.0%
CTTCATTCCAGATTCTCTAA+AGG + chr7.4:27925957-27925976 None:intergenic 35.0%
CTTCTTCCAAGCATCTTATT+AGG + chr7.4:27925465-27925484 None:intergenic 35.0%
CTTGTTGAGTTTACTAGAGA+AGG - chr7.4:27926900-27926919 MS.gene023937:CDS 35.0%
GAAATCCCTAATTCATCACA+AGG + chr7.4:27924433-27924452 None:intergenic 35.0%
GAACTTAATTCGTGATTACC+TGG + chr7.4:27925569-27925588 None:intergenic 35.0%
GACTAGTATCTTTCCAACTT+AGG + chr7.4:27925624-27925643 None:intergenic 35.0%
GATAGGATTTGTACTAATGG+TGG + chr7.4:27926405-27926424 None:intergenic 35.0%
GATCCTGTTATTATTGCAAG+TGG - chr7.4:27925543-27925562 MS.gene023937:CDS 35.0%
GCTAATTGAAGATGTTCCAA+AGG + chr7.4:27926138-27926157 None:intergenic 35.0%
TACTTGTGTTAACTCCTGAA+GGG - chr7.4:27926841-27926860 MS.gene023937:CDS 35.0%
TCCAACACTTCTATTATAGC+TGG + chr7.4:27926528-27926547 None:intergenic 35.0%
TCCAATCTTTATCCAACAGT+CGG - chr7.4:27925782-27925801 MS.gene023937:intron 35.0%
TCCCTTTCATATGTCTTTGA+TGG + chr7.4:27926060-27926079 None:intergenic 35.0%
TGCTTATAATAGTGATCGGA+TGG - chr7.4:27925022-27925041 MS.gene023937:intron 35.0%
TTGTTGAAATTGTGTAGCCA+AGG - chr7.4:27924136-27924155 MS.gene023937:CDS 35.0%
! CTTCTTCATTCTCATTTTCC+GGG + chr7.4:27923886-27923905 None:intergenic 35.0%
! GATAGGTTTTCAACCAAACA+TGG + chr7.4:27926279-27926298 None:intergenic 35.0%
! TAGCTCTCTCTTTATTTGCA+TGG + chr7.4:27926734-27926753 None:intergenic 35.0%
! TCCAGCTATAATAGAAGTGT+TGG - chr7.4:27926524-27926543 MS.gene023937:CDS 35.0%
! TCCCTTTTCTTTCTCTAACA+AGG + chr7.4:27925338-27925357 None:intergenic 35.0%
! TTTTGCAAGCCTTTCGATAA+TGG + chr7.4:27925259-27925278 None:intergenic 35.0%
!! AGAATTTTAGTCGCCGAAAA+CGG - chr7.4:27926372-27926391 MS.gene023937:intron 35.0%
!! ATCTGCTTGTTTTCTACATC+TGG + chr7.4:27924659-27924678 None:intergenic 35.0%
!! ATTTCTTCTTGGTTTTCGGT+TGG + chr7.4:27926255-27926274 None:intergenic 35.0%
!! ATTTTGGCCTTTAGAGAATC+TGG - chr7.4:27925947-27925966 MS.gene023937:intron 35.0%
!! GTTGGAAAATGGAAGTATTG+TGG - chr7.4:27926542-27926561 MS.gene023937:CDS 35.0%
!! TTTTCTTGCGTTTTAGGCAT+GGG - chr7.4:27924339-27924358 MS.gene023937:CDS 35.0%
!! TTTTTCTTGCGTTTTAGGCA+TGG - chr7.4:27924338-27924357 MS.gene023937:CDS 35.0%
AACAGATTCAAAAGGACTGC+AGG - chr7.4:27925396-27925415 MS.gene023937:CDS 40.0%
ACAAGACATAGAGCTAGCAA+TGG - chr7.4:27925185-27925204 MS.gene023937:intron 40.0%
AGAAGAAGAATGCAATGGTG+TGG - chr7.4:27923901-27923920 MS.gene023937:CDS 40.0%
AGAAGGGACTCCAAAGAATA+AGG - chr7.4:27926917-27926936 MS.gene023937:CDS 40.0%
AGAGCTAGCAATGGATATGA+TGG - chr7.4:27925194-27925213 MS.gene023937:intron 40.0%
AGGCCAAAATCCACAAACTT+CGG + chr7.4:27925937-27925956 None:intergenic 40.0%
ATTGGACACAGAAACTCATG+AGG + chr7.4:27925504-27925523 None:intergenic 40.0%
CAAACACATGTTGCCTCTTA+TGG - chr7.4:27924024-27924043 MS.gene023937:CDS 40.0%
CACCTTGCCGGAATAAAATA+AGG + chr7.4:27924577-27924596 None:intergenic 40.0%
CATTCGTGCAATTTGCACAT+TGG + chr7.4:27924698-27924717 None:intergenic 40.0%
CGAAAGGCTTGCAAAAAAGT+TGG - chr7.4:27925263-27925282 MS.gene023937:intron 40.0%
CTACTTGTGTTAACTCCTGA+AGG - chr7.4:27926840-27926859 MS.gene023937:CDS 40.0%
CTCGACTGTTGCATACATAT+TGG - chr7.4:27925699-27925718 MS.gene023937:CDS 40.0%
GATCCAAGGACTCATTGAAT+CGG - chr7.4:27923937-27923956 MS.gene023937:CDS 40.0%
GCGAATACAGAAGAACACAA+AGG - chr7.4:27923972-27923991 MS.gene023937:CDS 40.0%
GCTGCACATTCCTTATTCTT+TGG + chr7.4:27926930-27926949 None:intergenic 40.0%
GGATCTTGAGGTAGAAACAT+TGG - chr7.4:27925302-27925321 MS.gene023937:intron 40.0%
GTGGTACAAATAGAGCACAA+AGG - chr7.4:27927045-27927064 MS.gene023937:CDS 40.0%
GTGTGCCTTGTGATGAATTA+GGG - chr7.4:27924425-27924444 MS.gene023937:CDS 40.0%
TCCAAGCATCTTATTAGGCA+TGG + chr7.4:27925460-27925479 None:intergenic 40.0%
TCCGACTGTTGGATAAAGAT+TGG + chr7.4:27925786-27925805 None:intergenic 40.0%
TGGCCACTTGCAATAATAAC+AGG + chr7.4:27925549-27925568 None:intergenic 40.0%
TGTTATTATTGCAAGTGGCC+AGG - chr7.4:27925548-27925567 MS.gene023937:CDS 40.0%
TTTGTGAATGCGGTGTATTG+CGG + chr7.4:27924606-27924625 None:intergenic 40.0%
! AAAGGGAAAGCATAGAGAAG+TGG - chr7.4:27926073-27926092 MS.gene023937:intron 40.0%
! ATTTGCACATTGGTGGTTGT+TGG + chr7.4:27924688-27924707 None:intergenic 40.0%
! CCTTTCGATAATGGCACTAT+CGG + chr7.4:27925250-27925269 None:intergenic 40.0%
!! AGGTTGTAGGAGTGTCAAAT+GGG - chr7.4:27926622-27926641 MS.gene023937:intron 40.0%
!! GTTCTAAGTTGATCGACGAT+AGG + chr7.4:27926296-27926315 None:intergenic 40.0%
!!! ACCCTTATTTTATTCCGGCA+AGG - chr7.4:27924572-27924591 MS.gene023937:CDS 40.0%
AAGGCACACCATCAAAAGCT+TGG + chr7.4:27924414-27924433 None:intergenic 45.0%
ACAAAACCTGTCCGAAGACA+AGG - chr7.4:27926109-27926128 MS.gene023937:intron 45.0%
ACATCATAGTGCAGCTGTAG+AGG - chr7.4:27925910-27925929 MS.gene023937:intron 45.0%
ACTTTGGCAGCACTTCAGTT+TGG - chr7.4:27926990-27927009 MS.gene023937:CDS 45.0%
AGAACCAGAATCAAGCAACC+CGG - chr7.4:27923865-27923884 MS.gene023937:CDS 45.0%
AGAAGAATGCAATGGTGTGG+TGG - chr7.4:27923904-27923923 MS.gene023937:CDS 45.0%
ATTCAAAAGGACTGCAGGCA+TGG - chr7.4:27925401-27925420 MS.gene023937:CDS 45.0%
CATCATCCTGTTCCTCGAAA+CGG - chr7.4:27924064-27924083 MS.gene023937:CDS 45.0%
GCATTCACATGGTCAATCGT+TGG - chr7.4:27924631-27924650 MS.gene023937:CDS 45.0%
GCCATGCCTAATAAGATGCT+TGG - chr7.4:27925456-27925475 MS.gene023937:CDS 45.0%
GCTAGCAATGGATATGATGG+TGG - chr7.4:27925197-27925216 MS.gene023937:intron 45.0%
GGTGTGCCTTGTGATGAATT+AGG - chr7.4:27924424-27924443 MS.gene023937:CDS 45.0%
GTCAAATGGGATTCCAGCTT+TGG - chr7.4:27926635-27926654 MS.gene023937:intron 45.0%
GTGCAAATTGCACGAATGCA+CGG - chr7.4:27924700-27924719 MS.gene023937:CDS 45.0%
TCACGAAGGTCTTCCATAAG+AGG + chr7.4:27924040-27924059 None:intergenic 45.0%
TCGTGCAATTTGCACATTGG+TGG + chr7.4:27924695-27924714 None:intergenic 45.0%
TTCGAGGAACAGGATGATGA+AGG + chr7.4:27924063-27924082 None:intergenic 45.0%
TTGTGTTAACTCCTGAAGGG+AGG - chr7.4:27926844-27926863 MS.gene023937:CDS 45.0%
! AGATGCGCTTTTCTTCGCTA+AGG - chr7.4:27924111-27924130 MS.gene023937:CDS 45.0%
! CCGATAGTGCCATTATCGAA+AGG - chr7.4:27925247-27925266 MS.gene023937:intron 45.0%
! CGAAGAAAAGCGCATCTCTA+AGG + chr7.4:27924108-27924127 None:intergenic 45.0%
! CGAGGTGAATTTTGCTTCCT+TGG + chr7.4:27924156-27924175 None:intergenic 45.0%
! GAGGTAGAAACATTGGCTGT+TGG - chr7.4:27925309-27925328 MS.gene023937:intron 45.0%
! GGACCGAAGTTTGTGGATTT+TGG - chr7.4:27925931-27925950 MS.gene023937:intron 45.0%
! TCACAGTGTTGAGGATCTTG+AGG - chr7.4:27925290-27925309 MS.gene023937:intron 45.0%
! TGGTGGTATTCCTCCGTTTT+CGG + chr7.4:27926388-27926407 None:intergenic 45.0%
! TTTTCCGGGTTGCTTGATTC+TGG + chr7.4:27923872-27923891 None:intergenic 45.0%
!! ATTTTAGTCGCCGAAAACGG+AGG - chr7.4:27926375-27926394 MS.gene023937:intron 45.0%
!! CTTCGGACAGGTTTTGTGAT+TGG + chr7.4:27926106-27926125 None:intergenic 45.0%
!! GAGGTTGTAGGAGTGTCAAA+TGG - chr7.4:27926621-27926640 MS.gene023937:intron 45.0%
!! GCTTGGAAGAAGCACTTCTT+TGG - chr7.4:27925473-27925492 MS.gene023937:CDS 45.0%
!! TTCTTGGTTTTCGGTTGGAG+TGG + chr7.4:27926250-27926269 None:intergenic 45.0%
AACCAAACAACGCCGTTTCG+AGG + chr7.4:27924079-27924098 None:intergenic 50.0%
AATCCACAGAGTCCGACTGT+TGG + chr7.4:27925797-27925816 None:intergenic 50.0%
AATGCACGTGCAACTCAGGA+GGG - chr7.4:27925143-27925162 MS.gene023937:intron 50.0%
AGAATGCAATGGTGTGGTGG+TGG - chr7.4:27923907-27923926 MS.gene023937:CDS 50.0%
AGCTAATGCACGTGCAACTC+AGG - chr7.4:27925139-27925158 MS.gene023937:intron 50.0%
CAACTGCAGCCGTAGATGAT+TGG + chr7.4:27925827-27925846 None:intergenic 50.0%
CAGGATGATGAAGGTCACGA+AGG + chr7.4:27924054-27924073 None:intergenic 50.0%
CATCTACGGCTGCAGTTGTA+GGG - chr7.4:27925829-27925848 MS.gene023937:intron 50.0%
CCAAGGACTCATTGAATCGG+TGG - chr7.4:27923940-27923959 MS.gene023937:CDS 50.0%
CTGTAGAGGACCGAAGTTTG+TGG - chr7.4:27925924-27925943 MS.gene023937:intron 50.0%
GAAACGGCGTTGTTTGGTTG+AGG - chr7.4:27924080-27924099 MS.gene023937:CDS 50.0%
GTTGGAGCTTCACAGTGTTG+AGG - chr7.4:27925281-27925300 MS.gene023937:intron 50.0%
TAATGCACGTGCAACTCAGG+AGG - chr7.4:27925142-27925161 MS.gene023937:intron 50.0%
TATCCAACAGTCGGACTCTG+TGG - chr7.4:27925791-27925810 MS.gene023937:intron 50.0%
TCATCTACGGCTGCAGTTGT+AGG - chr7.4:27925828-27925847 MS.gene023937:intron 50.0%
TCCAAAGGCTGCCTTGTCTT+CGG + chr7.4:27926123-27926142 None:intergenic 50.0%
TTAGGCATGGGAAGGTGAGA+TGG - chr7.4:27924351-27924370 MS.gene023937:CDS 50.0%
TTCCTCGAAACGGCGTTGTT+TGG - chr7.4:27924074-27924093 MS.gene023937:CDS 50.0%
! TGTGTTTGAAACGACGAGCG+AGG + chr7.4:27924012-27924031 None:intergenic 50.0%
!! CCACCGATTCAATGAGTCCT+TGG + chr7.4:27923943-27923962 None:intergenic 50.0%
!! CTTGCGTTTTAGGCATGGGA+AGG - chr7.4:27924343-27924362 MS.gene023937:CDS 50.0%
ACAACGCCGTTTCGAGGAAC+AGG + chr7.4:27924073-27924092 None:intergenic 55.0%
GGAAGGAACAGAAGAGAGGG+AGG - chr7.4:27923835-27923854 MS.gene023937:CDS 55.0%
TCCGAAGACAAGGCAGCCTT+TGG - chr7.4:27926119-27926138 MS.gene023937:intron 55.0%
TTGCGGCGAATACACCTTGC+CGG + chr7.4:27924589-27924608 None:intergenic 55.0%
! AACTCCTGAAGGGAGGCATG+AGG - chr7.4:27926851-27926870 MS.gene023937:CDS 55.0%
!! ATGCAATGGTGTGGTGGTGG+TGG - chr7.4:27923910-27923929 MS.gene023937:CDS 55.0%
ACGTGCAACTCAGGAGGGCA+AGG - chr7.4:27925148-27925167 MS.gene023937:intron 60.0%
AGGCTGCCTTGTCTTCGGAC+AGG + chr7.4:27926118-27926137 None:intergenic 60.0%
CCAACCTCATGCCTCCCTTC+AGG + chr7.4:27926858-27926877 None:intergenic 60.0%
! CCTGAAGGGAGGCATGAGGT+TGG - chr7.4:27926855-27926874 MS.gene023937:CDS 60.0%
!! CAATGGTGTGGTGGTGGTGG+AGG - chr7.4:27923913-27923932 MS.gene023937:CDS 60.0%
!! GTGGTGGTGGAGGAGATCCA+AGG - chr7.4:27923923-27923942 MS.gene023937:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 27923833 27927101 27923833 ID=MS.gene023937
chr7.4 mRNA 27923833 27927101 27923833 ID=MS.gene023937.t1;Parent=MS.gene023937
chr7.4 exon 27926760 27927101 27926760 ID=MS.gene023937.t1.exon1;Parent=MS.gene023937.t1
chr7.4 CDS 27926760 27927101 27926760 ID=cds.MS.gene023937.t1;Parent=MS.gene023937.t1
chr7.4 exon 27926463 27926579 27926463 ID=MS.gene023937.t1.exon2;Parent=MS.gene023937.t1
chr7.4 CDS 27926463 27926579 27926463 ID=cds.MS.gene023937.t1;Parent=MS.gene023937.t1
chr7.4 exon 27925365 27925799 27925365 ID=MS.gene023937.t1.exon3;Parent=MS.gene023937.t1
chr7.4 CDS 27925365 27925799 27925365 ID=cds.MS.gene023937.t1;Parent=MS.gene023937.t1
chr7.4 exon 27923833 27924868 27923833 ID=MS.gene023937.t1.exon4;Parent=MS.gene023937.t1
chr7.4 CDS 27923833 27924868 27923833 ID=cds.MS.gene023937.t1;Parent=MS.gene023937.t1
Gene Sequence

>MS.gene023937

ATGGAAGGAACAGAAGAGAGGGAGGAAAATGTAGAACCAGAATCAAGCAACCCGGAAAATGAGAATGAAGAAGAAGAATGCAATGGTGTGGTGGTGGTGGAGGAGATCCAAGGACTCATTGAATCGGTGGTTCAATTCGGCGAATACAGAAGAACACAAAGGAAAGAATCACACAACCTCGCTCGTCGTTTCAAACACATGTTGCCTCTTATGGAAGACCTTCGTGACCTTCATCATCCTGTTCCTCGAAACGGCGTTGTTTGGTTGAGGAACCTTAGAGATGCGCTTTTCTTCGCTAAGGATTTGTTGAAATTGTGTAGCCAAGGAAGCAAAATTCACCTCGTAAATAACAAACAAACTTTTTCTCATTTTTATGTTTTTTTTCTTTTTCTAATGAAATAATACAAATCATCAAATCTATGATTTCTCTTTTTTAAGGATAAGAAATAATTATCATTTTTGTATTTGATTATGTTTTGATGAATAGGGTATTGATGTTTTCTTTTTTTTCTTGCGTTTTAGGCATGGGAAGGTGAGATGGTTATGATCAAATTTCAGAAGGTTTATGAAAAATTAAGCCAAGCTTTTGATGGTGTGCCTTGTGATGAATTAGGGATTTCTGATGAAGTAAAAGAACAGGTATTTGTAAATTGTAATACATTTTATGTTTTATTTTCATTTAGTTTAATAATCACTATGATTCTGCAAAGATTGTTCAATATATAATTATGTGTATGGAACCCTTATTTTATTCCGGCAAGGTGTATTCGCCGCAATACACCGCATTCACAAATACATGCATTCACATGGTCAATCGTTGGATCCAGATGTAGAAAACAAGCAGATTTTGATCCAACAACCACCAATGTGCAAATTGCACGAATGCACGGAATTTGTGACTATATCAAATGCAAATCCGCTCTTAATAATTACACTTTTGGTCACTGTTATAAGCAAAAAATCAGTTTTAGATTAATTGAATAACTGAAGTATTTGGTCTATAATATATACCAAATACACCATTTATTCAATAAACCTACAAAAATGATTTGTTGCTTTAATAATTACACATTTGGTCACTGTTATAAGCAAAAAATCATTTTTAGATTAATTGAATAACTGAAGTATTTTGGTCTATAATATAGACCAAATACACCAGTTATTCAATAAACCTACAAAAATGATTTGTTGCTTATAATAGTGATCGGATGGAGCAATTATCCGATCACTATGTTGCTAGTAGTCTTCGATCATATATAATATACATATTGAAATAATGTTATATACTTTGGCTTAATTCAGCTTGAGCTAATGCACGTGCAACTCAGGAGGGCAAGGAGAAGAACTGATACACAAGACATAGAGCTAGCAATGGATATGATGGTGGTGTTCTCTGATGAAGATGATCGTAATGCCGATAGTGCCATTATCGAAAGGCTTGCAAAAAAGTTGGAGCTTCACAGTGTTGAGGATCTTGAGGTAGAAACATTGGCTGTTGGAAACCTTGTTAGAGAAAGAAAAGGGAAACAAAGTGAGAGTACAAAAAAAATAATTGACCTTCTTAACAGATTCAAAAGGACTGCAGGCATGGAAGAAACCGATGTTATCTTTGATGATGATCATGCCATGCCTAATAAGATGCTTGGAAGAAGCACTTCTTTGGTCATTCCTCATGAGTTTCTGTGTCCAATAACACTTGAAATTATGTCTGATCCTGTTATTATTGCAAGTGGCCAGGTAATCACGAATTAAGTTCTGTAAAAGAATTTTAATTTTTTCACATTTAAGCCTAAGTTGGAAAGATACTAGTCATATTTATGAAAATGGATTCGATGCGGTCAATAATTTCTACTATAATCAATAGATCTCGACTGTTGCATACATATTGGACGGTTCATATTATGAATTCGTATTATAAATTTGATTCGGTGAAGTTCAAATATGAATCGTCCAATCTTTATCCAACAGTCGGACTCTGTGGATTCTGAAATCCAATCATCTACGGCTGCAGTTGTAGGGACTATTAGATTTAGAATGAGAATTTCTCACTCTTAATCTAACGGTCGCGACATATGCAACATCATAGTGCAGCTGTAGAGGACCGAAGTTTGTGGATTTTGGCCTTTAGAGAATCTGGAATGAAGAAAACTTAGGTTTTATCTCTATATAATAATGCTAACAAAGGTTTTGTTTCTCTTTTTCTTGTCATTGTGTGTGTTTGTTTCCATCAAAGACATATGAAAGGGAAAGCATAGAGAAGTGGTTCAAATCCAATCACAAAACCTGTCCGAAGACAAGGCAGCCTTTGGAACATCTTCAATTAGCACCAAACTGTGCCTTAAGAAATTTAATTGCTGAATGGTGTGAGAACAACAATTTCAAACTTCCAAAAATCTGTTCTTCATGTCAAGAAACCACTCCAACCGAAAACCAAGAAGAAATTCCATGTTTGGTTGAAAACCTATCGTCGATCAACTTAGAACATCAAAGAAAGGCGGTCGAGAGAATCCGCATGTTATCAAAAGAAAGTTCAGAGAACAGAATTTTAGTCGCCGAAAACGGAGGAATACCACCATTAGTACAAATCCTATCATATCCAGATTCAAAAATAAAAGAACATGCTGTTACAGCACTTTTGAACTTATCAATTGATGAAGCTAACAAAAAACTTATATCAAAAGAAGGTGCTATTCCAGCTATAATAGAAGTGTTGGAAAATGGAAGTATTGTGGCTAAAGAAAACTCTGCAGCAGCTTTATTTAGCTTATCAATGATTGATGAAAATAAAGAGGTTGTAGGAGTGTCAAATGGGATTCCAGCTTTGGTAAATTTATTACAAAATGGAACAGTTAGAGGGAAAAAAGATGCTGCTACAGCACTTTTTAGCTTATCATTAAACCATGCAAATAAAGAGAGAGCTATAAAAGCTGGAATTGTGACAGCTTTACTTCAATTGTTAAAGGACAGAAACTTGGGAATGATTGATGAAGCACTTTCTATTTTGTTGCTACTTGTGTTAACTCCTGAAGGGAGGCATGAGGTTGGACAATTATCATTTATTGAAACTCTTGTTGAGTTTACTAGAGAAGGGACTCCAAAGAATAAGGAATGTGCAGCTTCTGTTCTTCTTGAGTTGTGTTCAAGTAATTCATCTTTTACTTTGGCAGCACTTCAGTTTGGAGTTTATGAGCATTTGATTGAGATTAAAGAAAGTGGTACAAATAGAGCACAAAGGAAAGCAAATGCAATTTTAGATCTCATAAAAAGGA
Protein sequence

>MS.gene023937.t1

MEGTEEREENVEPESSNPENENEEEECNGVVVVEEIQGLIESVVQFGEYRRTQRKESHNLARRFKHMLPLMEDLRDLHHPVPRNGVVWLRNLRDALFFAKDLLKLCSQGSKIHLAWEGEMVMIKFQKVYEKLSQAFDGVPCDELGISDEVKEQLELMHVQLRRARRRTDTQDIELAMDMMVVFSDEDDRNADSAIIERLAKKLELHSVEDLEVETLAVGNLVRERKGKQSESTKKIIDLLNRFKRTAGMEETDVIFDDDHAMPNKMLGRSTSLVIPHEFLCPITLEIMSDPVIIASGQTYERESIEKWFKSNHKTCPKTRQPLEHLQLAPNCALRNLIAEWCENNNFKLPKICSSCQETTPTENQEEIPCLVENLSSINLEHQRKAVERIRMLSKESSENRILVAENGGIPPLVQILSYPDSKIKEHAVTALLNLSIDEANKKLISKEGAIPAIIEVLENGSIVAKENSAAALFSLSMIDENKEVVGVSNGIPALVNLLQNGTVRGKKDAATALFSLSLNHANKERAIKAGIVTALLQLLKDRNLGMIDEALSILLLLVLTPEGRHEVGQLSFIETLVEFTREGTPKNKECAASVLLELCSSNSSFTLAALQFGVYEHLIEIKESGTNRAQRKANAILDLIKR