AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene51233


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51233.t1 MTR_1g094215 89.357 498 9 2 1 454 133 630 0.0 886
MS.gene51233.t1 MTR_1g094215 88.143 447 9 2 52 454 1 447 0.0 782
MS.gene51233.t1 MTR_4g063800 55.268 503 167 4 1 445 127 629 2.38e-180 520
MS.gene51233.t1 MTR_4g485520 55.937 379 141 1 94 446 104 482 1.72e-144 422
MS.gene51233.t1 MTR_4g485520 55.937 379 141 1 94 446 272 650 3.42e-142 422
MS.gene51233.t1 MTR_7g059405 47.233 506 201 7 1 442 129 632 2.61e-136 406
MS.gene51233.t1 MTR_7g078330 43.089 492 234 5 1 446 153 644 6.91e-126 379
MS.gene51233.t1 MTR_5g083030 45.802 393 170 6 95 444 293 685 2.46e-105 328
MS.gene51233.t1 MTR_2g018010 44.330 388 178 9 95 446 292 677 4.51e-87 281
MS.gene51233.t1 MTR_7g053260 39.221 385 200 9 90 445 73 452 4.46e-82 261
MS.gene51233.t1 MTR_3g466220 53.061 294 135 2 148 439 509 801 1.11e-78 261
MS.gene51233.t1 MTR_3g466220 40.523 153 75 3 32 169 135 286 1.68e-28 119
MS.gene51233.t1 MTR_3g466220 53.061 294 135 2 148 439 530 822 1.79e-78 260
MS.gene51233.t1 MTR_3g466220 40.523 153 75 3 32 169 156 307 1.88e-28 119
MS.gene51233.t1 MTR_1g093965 51.515 264 59 3 108 371 1 195 1.87e-77 240
MS.gene51233.t1 MTR_7g116600 37.442 430 225 11 49 444 33 452 2.37e-76 246
MS.gene51233.t1 MTR_1g093995 50.758 264 61 3 108 371 1 195 3.25e-75 234
MS.gene51233.t1 MTR_2g026130 48.315 267 138 0 184 450 190 456 6.98e-70 229
MS.gene51233.t1 MTR_3g103050 42.623 305 170 2 145 444 26 330 2.76e-67 219
MS.gene51233.t1 MTR_7g097020 49.430 263 132 1 177 439 490 751 6.26e-67 228
MS.gene51233.t1 MTR_7g097020 62.500 72 27 0 99 170 245 316 2.58e-25 109
MS.gene51233.t1 MTR_1g069845 50.198 253 125 1 187 439 341 592 6.30e-66 222
MS.gene51233.t1 MTR_1g069845 63.235 68 25 0 95 162 124 191 2.03e-24 106
MS.gene51233.t1 MTR_4g107010 32.353 510 278 11 1 443 155 664 8.34e-66 225
MS.gene51233.t1 MTR_1g018180 44.061 261 146 0 184 444 76 336 1.12e-65 214
MS.gene51233.t1 MTR_1g079450 38.860 386 206 8 90 447 58 441 1.88e-65 217
MS.gene51233.t1 MTR_1g069845 49.609 256 128 1 184 439 455 709 4.01e-65 223
MS.gene51233.t1 MTR_1g069845 63.235 68 25 0 95 162 241 308 5.54e-24 105
MS.gene51233.t1 MTR_1g069845 49.609 256 128 1 184 439 459 713 4.63e-65 223
MS.gene51233.t1 MTR_1g069845 63.235 68 25 0 95 162 245 312 5.04e-24 105
MS.gene51233.t1 MTR_1g094025 49.802 253 96 7 1 252 53 275 1.86e-63 207
MS.gene51233.t1 MTR_1g094025 67.826 115 14 1 245 359 188 279 4.79e-37 137
MS.gene51233.t1 MTR_3g078160 34.430 395 219 10 94 451 274 665 5.26e-62 213
MS.gene51233.t1 MTR_3g078160 34.430 395 219 10 94 451 274 665 6.14e-62 213
MS.gene51233.t1 MTR_4g028960 37.245 392 200 9 94 444 279 665 2.43e-60 209
MS.gene51233.t1 MTR_3g078160 41.729 266 120 7 94 327 274 536 2.15e-50 179
MS.gene51233.t1 MTR_4g091880 35.135 370 212 9 95 443 5 367 4.36e-47 167
MS.gene51233.t1 MTR_5g034440 34.896 384 213 8 97 443 282 665 2.24e-46 171
MS.gene51233.t1 MTR_4g091880 33.058 363 201 9 95 443 5 339 3.82e-44 158
MS.gene51233.t1 MTR_2g011140 30.914 372 223 8 97 443 17 379 7.41e-43 155
MS.gene51233.t1 MTR_3g078340 35.926 270 168 2 177 443 219 486 4.23e-39 148
MS.gene51233.t1 MTR_3g085610 31.126 302 182 9 93 384 278 563 1.11e-34 137
MS.gene51233.t1 MTR_3g085610 27.407 270 182 7 190 449 448 713 1.04e-17 86.3
MS.gene51233.t1 MTR_4g085720 30.256 390 240 10 95 454 14 401 2.18e-33 130
MS.gene51233.t1 MTR_5g015210 28.571 322 215 6 95 401 67 388 1.53e-32 129
MS.gene51233.t1 MTR_8g080280 25.455 440 237 10 96 450 283 716 2.79e-32 130
MS.gene51233.t1 MTR_2g007630 34.956 226 113 6 108 331 1 194 1.49e-30 119
MS.gene51233.t1 MTR_1g017770 28.448 348 222 9 95 422 45 385 1.31e-29 120
MS.gene51233.t1 MTR_5g069340 35.955 267 164 5 183 443 48 313 4.21e-29 117
MS.gene51233.t1 MTR_6g008170 31.349 252 168 2 191 439 260 509 5.66e-29 119
MS.gene51233.t1 MTR_3g065080 26.100 341 208 7 95 397 36 370 1.90e-28 117
MS.gene51233.t1 MTR_3g095730 28.650 363 213 11 95 420 13 366 3.01e-28 116
MS.gene51233.t1 MTR_5g048050 27.805 410 238 15 94 451 24 427 4.64e-27 113
MS.gene51233.t1 MTR_1g056840 28.904 301 158 9 99 343 11 311 6.88e-27 112
MS.gene51233.t1 MTR_8g092870 26.776 366 218 12 95 420 10 365 3.37e-26 110
MS.gene51233.t1 MTR_3g106140 31.338 284 181 6 177 448 118 399 9.60e-26 110
MS.gene51233.t1 MTR_1g014420 31.408 277 176 6 184 448 144 418 1.15e-25 109
MS.gene51233.t1 MTR_6g071340 27.970 404 241 15 94 449 4 405 1.42e-25 108
MS.gene51233.t1 MTR_1g056880 29.139 302 158 10 99 344 11 312 3.31e-25 107
MS.gene51233.t1 MTR_2g087350 30.968 310 165 10 95 366 6 304 6.94e-25 106
MS.gene51233.t1 MTR_8g077205 56.000 75 33 0 96 170 164 238 1.74e-24 107
MS.gene51233.t1 MTR_8g077205 56.000 75 33 0 96 170 276 350 2.24e-24 107
MS.gene51233.t1 MTR_7g106340 30.345 290 164 10 90 341 3 292 3.23e-24 104
MS.gene51233.t1 MTR_5g077510 25.000 388 247 13 95 442 35 418 2.45e-23 102
MS.gene51233.t1 MTR_1g056870 28.239 301 160 10 99 343 11 311 5.91e-23 101
MS.gene51233.t1 MTR_5g020570 53.333 75 35 0 96 170 274 348 1.73e-22 101
MS.gene51233.t1 MTR_5g020570 53.333 75 35 0 96 170 289 363 2.28e-22 100
MS.gene51233.t1 MTR_1g094205 58.333 84 11 1 164 223 22 105 1.77e-20 86.7
MS.gene51233.t1 MTR_5g079550 30.496 282 176 8 187 453 38 314 2.69e-19 89.7
MS.gene51233.t1 MTR_3g096370 55.224 67 30 0 95 161 10 76 2.81e-19 89.7
MS.gene51233.t1 MTR_3g115670 27.170 265 171 9 90 338 26 284 4.09e-19 90.9
MS.gene51233.t1 MTR_8g039560 32.852 277 163 13 190 448 29 300 1.24e-18 87.0
MS.gene51233.t1 MTR_6g004790 28.938 273 179 7 181 443 14 281 3.55e-17 82.8
MS.gene51233.t1 MTR_3g067685 31.939 263 170 6 187 443 59 318 4.31e-17 83.2
MS.gene51233.t1 MTR_7g117890 30.859 256 164 8 93 339 252 503 1.70e-16 82.8
MS.gene51233.t1 MTR_1g056910 37.500 136 61 5 95 210 6 137 7.34e-16 79.7
MS.gene51233.t1 MTR_1g090320 34.783 138 71 3 96 215 516 652 1.18e-15 80.5
MS.gene51233.t1 MTR_1g090320 34.783 138 71 3 96 215 514 650 1.27e-15 80.1
MS.gene51233.t1 MTR_4g051515 34.752 141 70 4 95 215 6 144 1.50e-14 75.5
MS.gene51233.t1 MTR_8g103227 46.053 76 40 1 96 170 396 471 1.57e-14 76.6
MS.gene51233.t1 MTR_5g032010 44.286 70 39 0 92 161 729 798 7.46e-14 74.3
MS.gene51233.t1 MTR_1g100820 50.000 66 33 0 96 161 649 714 9.76e-14 73.9
MS.gene51233.t1 MTR_1g100820 50.000 66 33 0 96 161 647 712 1.01e-13 73.9
MS.gene51233.t1 MTR_7g007780 32.022 178 116 2 198 370 588 765 2.29e-13 72.8
MS.gene51233.t1 MTR_7g077780 45.714 70 38 0 96 165 827 896 6.39e-13 71.6
MS.gene51233.t1 MTR_4g125930 36.752 117 60 3 58 161 641 756 1.49e-12 70.1
MS.gene51233.t1 MTR_8g027140 28.745 247 168 6 99 339 263 507 1.69e-12 70.1
MS.gene51233.t1 MTR_4g125930 36.752 117 60 3 58 161 441 556 1.98e-12 69.7
MS.gene51233.t1 MTR_7g005940 43.056 72 38 2 92 161 592 662 2.13e-12 70.1
MS.gene51233.t1 MTR_7g005940 43.056 72 38 2 92 161 592 662 2.35e-12 69.7
MS.gene51233.t1 MTR_5g005940 31.548 168 113 2 183 348 209 376 2.74e-12 69.3
MS.gene51233.t1 MTR_5g005940 31.548 168 113 2 183 348 209 376 2.85e-12 69.3
MS.gene51233.t1 MTR_1g104870 30.952 168 114 2 183 348 212 379 3.16e-12 69.3
MS.gene51233.t1 MTR_2g096850 42.857 84 46 2 82 164 728 810 1.21e-11 67.4
MS.gene51233.t1 MTR_2g096850 42.857 84 46 2 82 164 577 659 1.24e-11 67.4
MS.gene51233.t1 MTR_7g094910 29.688 192 133 2 183 372 199 390 1.31e-11 67.0
MS.gene51233.t1 MTR_7g094900 29.688 192 133 2 183 372 218 409 1.36e-11 67.0
MS.gene51233.t1 MTR_7g094910 29.688 192 133 2 183 372 199 390 1.43e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51233.t1 AT3G54850 66.870 492 118 2 1 447 134 625 0.0 630
MS.gene51233.t1 AT3G46510 54.762 504 166 6 1 445 130 630 3.40e-179 516
MS.gene51233.t1 AT2G28830 47.741 509 199 8 1 445 58 563 1.41e-150 441
MS.gene51233.t1 AT1G23030 53.944 393 160 3 73 444 217 609 7.78e-135 401
MS.gene51233.t1 AT1G71020 54.476 391 150 3 82 444 82 472 5.68e-133 392
MS.gene51233.t1 AT1G71020 53.885 399 156 3 74 444 222 620 1.19e-130 391
MS.gene51233.t1 AT5G42340 45.738 481 220 4 7 446 178 658 6.07e-126 380
MS.gene51233.t1 AT3G07360 40.526 380 193 9 96 444 75 452 2.34e-82 261
MS.gene51233.t1 AT2G23140 56.322 261 113 1 183 443 368 627 1.68e-81 264
MS.gene51233.t1 AT2G23140 61.644 73 28 0 98 170 44 116 2.43e-27 115
MS.gene51233.t1 AT2G23140 56.322 261 113 1 183 443 368 627 1.68e-81 264
MS.gene51233.t1 AT2G23140 61.644 73 28 0 98 170 44 116 2.43e-27 115
MS.gene51233.t1 AT2G23140 56.322 261 113 1 183 443 560 819 2.39e-80 265
MS.gene51233.t1 AT2G23140 40.385 156 78 2 35 176 160 314 2.16e-28 119
MS.gene51233.t1 AT2G23140 56.322 261 113 1 183 443 557 816 2.80e-80 265
MS.gene51233.t1 AT2G23140 40.385 156 78 2 35 176 157 311 2.36e-28 119
MS.gene51233.t1 AT2G23140 56.322 261 113 1 183 443 557 816 2.80e-80 265
MS.gene51233.t1 AT2G23140 40.385 156 78 2 35 176 157 311 2.36e-28 119
MS.gene51233.t1 AT1G29340 42.377 387 186 9 95 446 305 689 9.97e-74 246
MS.gene51233.t1 AT3G01400 44.828 261 144 0 184 444 80 340 9.67e-68 220
MS.gene51233.t1 AT5G01830 37.560 418 217 11 65 450 246 651 1.42e-64 220
MS.gene51233.t1 AT5G67340 47.710 262 135 2 183 443 437 697 1.75e-63 218
MS.gene51233.t1 AT5G67340 29.087 416 243 10 30 398 161 571 3.87e-41 156
MS.gene51233.t1 AT5G67340 47.710 262 135 2 183 443 437 697 1.75e-63 218
MS.gene51233.t1 AT5G67340 29.087 416 243 10 30 398 161 571 3.87e-41 156
MS.gene51233.t1 AT4G16490 46.377 276 146 1 177 450 193 468 1.48e-60 205
MS.gene51233.t1 AT5G58680 41.221 262 153 1 184 444 78 339 6.04e-60 200
MS.gene51233.t1 AT3G54790 49.242 264 129 3 180 439 446 708 7.79e-59 206
MS.gene51233.t1 AT3G54790 45.361 97 51 1 95 191 202 296 1.25e-22 101
MS.gene51233.t1 AT3G54790 29.891 184 125 4 218 398 404 586 4.60e-13 72.0
MS.gene51233.t1 AT3G54790 49.242 264 129 3 180 439 482 744 1.37e-58 205
MS.gene51233.t1 AT3G54790 45.361 97 51 1 95 191 238 332 1.63e-22 101
MS.gene51233.t1 AT3G54790 29.891 184 125 4 218 398 440 622 5.07e-13 71.6
MS.gene51233.t1 AT3G54790 49.242 264 129 3 180 439 482 744 1.37e-58 205
MS.gene51233.t1 AT3G54790 45.361 97 51 1 95 191 238 332 1.63e-22 101
MS.gene51233.t1 AT3G54790 29.891 184 125 4 218 398 440 622 5.07e-13 71.6
MS.gene51233.t1 AT5G18320 35.733 389 208 12 92 445 68 449 1.52e-53 186
MS.gene51233.t1 AT1G60190 32.558 387 224 11 97 446 280 666 3.63e-48 176
MS.gene51233.t1 AT1G27910 29.263 434 227 8 94 449 278 709 5.43e-48 176
MS.gene51233.t1 AT3G07360 36.364 319 170 9 157 444 1 317 1.08e-47 167
MS.gene51233.t1 AT3G07360 36.364 319 170 9 157 444 1 317 1.08e-47 167
MS.gene51233.t1 AT3G07360 36.364 319 170 9 157 444 1 317 1.08e-47 167
MS.gene51233.t1 AT3G07360 36.364 319 170 9 157 444 1 317 1.08e-47 167
MS.gene51233.t1 AT3G07360 36.364 319 170 9 157 444 1 317 1.08e-47 167
MS.gene51233.t1 AT3G07360 36.364 319 170 9 157 444 1 317 1.08e-47 167
MS.gene51233.t1 AT3G07360 36.364 319 170 9 157 444 1 317 1.08e-47 167
MS.gene51233.t1 AT3G07360 36.364 319 170 9 157 444 1 317 1.08e-47 167
MS.gene51233.t1 AT3G07360 36.364 319 170 9 157 444 1 317 1.08e-47 167
MS.gene51233.t1 AT4G21350 32.425 367 225 7 95 442 5 367 1.04e-45 163
MS.gene51233.t1 AT5G18330 29.777 403 237 13 73 445 53 439 1.67e-39 148
MS.gene51233.t1 AT5G65200 35.556 270 161 3 191 449 248 515 6.88e-37 142
MS.gene51233.t1 AT1G10560 28.372 430 245 13 70 446 258 677 1.06e-36 143
MS.gene51233.t1 AT5G62560 37.008 254 153 3 191 439 258 509 2.39e-36 141
MS.gene51233.t1 AT1G49780 32.836 402 215 13 95 450 14 406 4.28e-35 135
MS.gene51233.t1 AT5G18340 29.427 384 232 11 95 442 74 454 1.10e-33 132
MS.gene51233.t1 AT3G19380 33.430 344 195 11 95 404 14 357 2.18e-33 130
MS.gene51233.t1 AT5G65920 28.421 380 227 10 93 441 58 423 2.61e-33 130
MS.gene51233.t1 AT5G65920 28.421 380 227 10 93 441 58 423 2.61e-33 130
MS.gene51233.t1 AT5G40140 33.582 268 171 4 191 453 252 517 3.92e-32 129
MS.gene51233.t1 AT5G40140 26.176 340 195 10 95 398 58 377 2.91e-19 90.9
MS.gene51233.t1 AT3G49810 28.418 373 232 10 95 441 64 427 5.04e-31 124
MS.gene51233.t1 AT4G31890 34.694 294 170 9 174 454 155 439 7.03e-31 125
MS.gene51233.t1 AT4G31890 34.694 294 170 9 174 454 155 439 7.03e-31 125
MS.gene51233.t1 AT4G31890 34.694 294 170 9 174 454 155 439 7.03e-31 125
MS.gene51233.t1 AT1G24330 54.444 90 41 0 81 170 261 350 5.39e-30 124
MS.gene51233.t1 AT1G24330 26.316 266 187 5 191 449 448 711 6.71e-19 90.1
MS.gene51233.t1 AT1G24330 54.444 90 41 0 81 170 261 350 5.39e-30 124
MS.gene51233.t1 AT1G24330 26.316 266 187 5 191 449 448 711 6.71e-19 90.1
MS.gene51233.t1 AT3G47820 34.351 262 162 5 190 443 228 487 1.80e-29 121
MS.gene51233.t1 AT1G67530 61.538 78 30 0 93 170 270 347 3.69e-29 121
MS.gene51233.t1 AT1G67530 28.244 262 178 6 190 443 447 706 1.21e-20 95.5
MS.gene51233.t1 AT1G67530 61.538 78 30 0 93 170 270 347 3.69e-29 121
MS.gene51233.t1 AT1G67530 28.244 262 178 6 190 443 447 706 1.21e-20 95.5
MS.gene51233.t1 AT1G67530 61.538 78 30 0 93 170 270 347 3.69e-29 121
MS.gene51233.t1 AT1G67530 28.244 262 178 6 190 443 447 706 1.21e-20 95.5
MS.gene51233.t1 AT1G67530 61.538 78 30 0 93 170 270 347 3.83e-29 120
MS.gene51233.t1 AT2G35930 31.000 300 179 10 95 366 12 311 2.06e-28 116
MS.gene51233.t1 AT4G12710 35.036 274 169 6 187 451 65 338 3.22e-28 115
MS.gene51233.t1 AT1G66160 26.632 383 241 15 95 445 33 407 2.70e-27 113
MS.gene51233.t1 AT5G37490 25.781 384 246 10 95 442 31 411 3.52e-27 113
MS.gene51233.t1 AT2G25130 32.841 271 164 8 190 446 132 398 3.77e-24 105
MS.gene51233.t1 AT5G64660 27.297 381 217 12 95 430 10 375 9.44e-24 103
MS.gene51233.t1 AT5G09800 25.141 354 229 10 95 420 11 356 2.53e-22 99.0
MS.gene51233.t1 AT1G08315 30.000 280 175 10 183 442 23 301 3.16e-22 97.4
MS.gene51233.t1 AT3G52450 26.859 417 240 17 95 448 7 421 3.52e-22 99.0
MS.gene51233.t1 AT3G18710 21.503 386 265 9 95 443 12 396 2.50e-20 93.2
MS.gene51233.t1 AT3G03440 28.723 282 190 6 177 450 74 352 2.67e-19 90.1
MS.gene51233.t1 AT1G66160 24.543 383 233 16 95 445 33 391 3.61e-18 86.7
MS.gene51233.t1 AT4G36550 45.333 75 41 0 95 169 219 293 2.25e-16 82.4
MS.gene51233.t1 AT5G14510 30.769 273 176 8 183 447 16 283 3.02e-16 80.1
MS.gene51233.t1 AT3G61390 33.333 141 84 5 39 177 226 358 3.75e-15 77.0
MS.gene51233.t1 AT3G61390 33.333 141 84 5 39 177 301 433 4.56e-15 77.4
MS.gene51233.t1 AT2G45920 49.333 75 36 1 87 161 319 391 9.10e-15 76.3
MS.gene51233.t1 AT3G11840 52.778 72 32 2 95 165 10 80 1.26e-14 76.3
MS.gene51233.t1 AT1G01680 44.928 69 38 0 97 165 235 303 1.28e-14 74.7
MS.gene51233.t1 AT3G60350 32.022 178 116 2 198 370 590 767 2.79e-14 75.9
MS.gene51233.t1 AT3G60350 32.022 178 116 2 198 370 590 767 2.79e-14 75.9
MS.gene51233.t1 AT1G01660 43.421 76 41 1 91 166 496 569 4.56e-14 74.7
MS.gene51233.t1 AT1G01660 43.421 76 41 1 91 166 495 568 4.80e-14 74.7
MS.gene51233.t1 AT2G44900 33.728 169 107 2 198 361 599 767 1.49e-13 73.6
MS.gene51233.t1 AT2G44900 33.728 169 107 2 198 361 599 767 1.49e-13 73.6
MS.gene51233.t1 AT1G20780 27.604 192 131 5 95 278 23 214 3.21e-13 72.4
MS.gene51233.t1 AT1G20780 27.604 192 131 5 95 278 23 214 3.21e-13 72.4
MS.gene51233.t1 AT1G20780 27.604 192 131 5 95 278 23 214 3.21e-13 72.4
MS.gene51233.t1 AT1G56040 46.479 71 36 1 88 158 348 416 4.88e-13 71.2
MS.gene51233.t1 AT5G65500 47.761 67 35 0 95 161 715 781 9.24e-13 70.9
MS.gene51233.t1 AT5G65500 47.761 67 35 0 95 161 723 789 9.87e-13 70.9
MS.gene51233.t1 AT1G56030 46.032 63 34 0 96 158 324 386 3.93e-12 68.2
MS.gene51233.t1 AT2G45910 43.836 73 39 1 89 161 759 829 7.57e-12 68.2
MS.gene51233.t1 AT2G45910 43.836 73 39 1 89 161 759 829 7.57e-12 68.2
MS.gene51233.t1 AT5G57035 38.750 80 49 0 96 175 709 788 1.44e-11 67.4
MS.gene51233.t1 AT1G76390 24.092 303 171 8 95 342 25 323 2.50e-11 66.6
MS.gene51233.t1 AT1G76390 24.092 303 171 8 95 342 25 323 2.50e-11 66.6
MS.gene51233.t1 AT3G49060 41.176 85 45 2 77 161 722 801 4.33e-11 65.9
MS.gene51233.t1 AT3G49060 41.176 85 45 2 77 161 712 791 4.38e-11 65.9
MS.gene51233.t1 AT3G49060 41.176 85 45 2 77 161 689 768 4.40e-11 65.9
MS.gene51233.t1 AT3G20170 25.253 198 143 1 200 397 184 376 5.64e-11 64.7
MS.gene51233.t1 AT5G50900 30.061 163 110 3 191 351 169 329 6.08e-11 65.1

Find 93 sgRNAs with CRISPR-Local

Find 128 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTATAACCTCAACTAAAAT+AGG 0.132718 1.2:-74306016 None:intergenic
CTGCAACTCCCTTGCTTCTT+TGG 0.167120 1.2:-74305327 None:intergenic
TGAAGAGTCTGATTGGTTTA+TGG 0.249287 1.2:+74305280 MS.gene51233:CDS
TCCTTTGTTACTCTCGTTGA+TGG 0.253869 1.2:-74305600 None:intergenic
TGCTGGTGAGCTCCGGTTGC+TGG 0.264800 1.2:+74305451 MS.gene51233:CDS
TTCAAAACATCTACAATATC+TGG 0.273503 1.2:-74305647 None:intergenic
CTTCAGGGATTATCAGAAAA+TGG 0.310426 1.2:+74306148 MS.gene51233:CDS
AGCAAATTCTGTTTGAGCTT+TGG 0.316577 1.2:-74304706 None:intergenic
CCTTTGCTAGTTTCAATTGC+AGG 0.330384 1.2:-74306105 None:intergenic
TGGAGCAGAAGAAGCACTTC+AGG 0.351787 1.2:+74306132 MS.gene51233:CDS
CGAAAATCATCTGGGATTAC+AGG 0.356127 1.2:-74305010 None:intergenic
AGACTCTTCAAAACGTAGTT+AGG 0.375832 1.2:-74305267 None:intergenic
TTCATCAGTTCGAGAGATAT+AGG 0.393884 1.2:-74305037 None:intergenic
TGACCGGTTGAGACGATTAC+AGG 0.398865 1.2:-74305064 None:intergenic
TGAAACATTCTCGTTCTCAT+AGG 0.402456 1.2:-74304972 None:intergenic
GCTATAATGACAATCCTTGC+AGG 0.409994 1.2:+74305950 MS.gene51233:CDS
CATTTCTCTTGGCCAGCAAC+CGG 0.412479 1.2:-74305463 None:intergenic
CTCACGGTTGCGTGGTGATC+CGG 0.413042 1.2:-74306041 None:intergenic
GTCCACTGAATTACACGAAT+TGG 0.417527 1.2:+74304848 MS.gene51233:CDS
CAAAGTAACTTTATAAGAGC+CGG 0.431128 1.2:-74305770 None:intergenic
TCCTTTGATACGATTTATGA+AGG 0.431714 1.2:+74305895 MS.gene51233:CDS
GATAGAGCTAAGAGAAAAGC+TGG 0.432820 1.2:+74306175 MS.gene51233:CDS
TTTAATCTATGTATTTATCA+AGG 0.434426 1.2:+74305836 MS.gene51233:CDS
GATGAGAACAAAGTTGCAAT+AGG 0.435327 1.2:+74305731 MS.gene51233:CDS
AGTTGCAGAACAAAGAAATC+TGG 0.441575 1.2:+74305342 MS.gene51233:CDS
TCGGTTATCTGCATTTCTCT+TGG 0.444128 1.2:-74305474 None:intergenic
ATAGGACACCGAAAATCATC+TGG 0.444428 1.2:-74305019 None:intergenic
TTCTCATAGGTATCAACCTC+AGG 0.450223 1.2:-74304959 None:intergenic
TGCTGATTTACAACTAGACT+TGG 0.455398 1.2:+74304725 MS.gene51233:CDS
TTAGTTGAGGTTATACGAAC+CGG 0.456126 1.2:+74306022 MS.gene51233:CDS
TTGCTGTCCTTCCTTCATGA+TGG 0.458588 1.2:-74305973 None:intergenic
GTATAACCTCAACTAAAATA+GGG 0.461180 1.2:-74306015 None:intergenic
TTCCTTCATGATGGCCTGCA+AGG 0.462779 1.2:-74305964 None:intergenic
TCAAAACGTAGTTAGGAGTA+AGG 0.468306 1.2:-74305260 None:intergenic
ACCGCATGCTCCTGAGTTCG+AGG 0.468410 1.2:-74305557 None:intergenic
TTAGATCATTCATAGTCCTC+AGG 0.469633 1.2:-74304818 None:intergenic
ACCTCAACTAAAATAGGGAT+TGG 0.470796 1.2:-74306010 None:intergenic
TTCCACAGATCCTCGAACTC+AGG 0.479457 1.2:+74305547 MS.gene51233:CDS
GAAGGATGCGGGCGGTGGGA+TGG 0.485190 1.2:+74305913 MS.gene51233:CDS
CATGAAGGAAGGACAGCAAT+TGG 0.491237 1.2:+74305977 MS.gene51233:CDS
GGGCGGCTGCTGGTGAGCTC+CGG 0.491475 1.2:+74305444 MS.gene51233:CDS
AAAGTTGCAATAGGTGCAGC+AGG 0.503040 1.2:+74305740 MS.gene51233:CDS
TTTATGAAGGATGCGGGCGG+TGG 0.504174 1.2:+74305908 MS.gene51233:CDS
AAGCGGTATTGCTCCTGCTT+CGG 0.508786 1.2:-74305507 None:intergenic
CGAGTATGTATTGCCGAAGC+AGG 0.513878 1.2:+74305494 MS.gene51233:CDS
GATACGATTTATGAAGGATG+CGG 0.516210 1.2:+74305901 MS.gene51233:CDS
GATCCTGTAATCGTCTCAAC+CGG 0.519344 1.2:+74305061 MS.gene51233:CDS
TGTAATCGTCTCAACCGGTC+AGG 0.519349 1.2:+74305066 MS.gene51233:CDS
AAAGCTAGAGCTGTTAAAGC+CGG 0.526299 1.2:+74305863 MS.gene51233:CDS
GAACAGCAAAGGGCGGCTGC+TGG 0.530588 1.2:+74305434 MS.gene51233:intron
CTTATAAAGTTACTTTGTGA+AGG 0.532116 1.2:+74305776 MS.gene51233:CDS
AGGAAGGACAGCAATTGGTC+AGG 0.536014 1.2:+74305982 MS.gene51233:CDS
AGGTGCAGCAGGAGCCATCC+CGG 0.539324 1.2:+74305751 MS.gene51233:CDS
GAACTGTTGCAGCGAATCGA+AGG 0.545611 1.2:+74306208 MS.gene51233:CDS
ATACGATTTATGAAGGATGC+GGG 0.548943 1.2:+74305902 MS.gene51233:CDS
AAAGTAACTTTATAAGAGCC+GGG 0.549044 1.2:-74305769 None:intergenic
CTCCTGAGTTCGAGGATCTG+TGG 0.551751 1.2:-74305549 None:intergenic
CTGCTTCGGCAATACATACT+CGG 0.554371 1.2:-74305493 None:intergenic
GGAGCAGAAGAAGCACTTCA+GGG 0.556560 1.2:+74306133 MS.gene51233:CDS
AAGCTAGAGCTGTTAAAGCC+GGG 0.558896 1.2:+74305864 MS.gene51233:CDS
CAAAACGTAGTTAGGAGTAA+GGG 0.565631 1.2:-74305259 None:intergenic
TTATGAAGGATGCGGGCGGT+GGG 0.567221 1.2:+74305909 MS.gene51233:CDS
AACTGTTGCAGCGAATCGAA+GGG 0.569767 1.2:+74306209 MS.gene51233:CDS
GACCAATTCGTGTAATTCAG+TGG 0.570216 1.2:-74304850 None:intergenic
ATCCTTGCAGGCCATCATGA+AGG 0.571335 1.2:+74305962 MS.gene51233:CDS
TCCTTCATAAATCGTATCAA+AGG 0.578982 1.2:-74305896 None:intergenic
TATCAAAGGAGCAACTATCC+CGG 0.586650 1.2:-74305882 None:intergenic
TTGAAACTAGCAAAGGAACA+TGG 0.590002 1.2:+74306112 MS.gene51233:CDS
AACTAAAATAGGGATTGGCT+CGG 0.594552 1.2:-74306005 None:intergenic
TCTCAGAGAAGTTGCACCTG+AGG 0.594729 1.2:+74304802 MS.gene51233:CDS
GACAACAAGTCTACGAGAAG+CGG 0.596931 1.2:-74305524 None:intergenic
TAACTTTATAAGAGCCGGGA+TGG 0.597754 1.2:-74305765 None:intergenic
AGAATGTTTCAATTAAGCAC+CGG 0.604626 1.2:+74304984 MS.gene51233:CDS
GCAGCATTCTCACGGTTGCG+TGG 0.609043 1.2:-74306049 None:intergenic
GTTGAACTACCAAAGAAGCA+AGG 0.609236 1.2:+74305318 MS.gene51233:CDS
CATCTGGGATTACAGGAGAC+CGG 0.612294 1.2:-74305003 None:intergenic
TCCTCGAACTCAGGAGCATG+CGG 0.612420 1.2:+74305556 MS.gene51233:CDS
TTGCAGGCCATCATGAAGGA+AGG 0.615941 1.2:+74305966 MS.gene51233:CDS
GGTTTATGGTGTGATAGCAA+TGG 0.620008 1.2:+74305294 MS.gene51233:CDS
GATTGGGGATAATACCTGAC+CGG 0.621034 1.2:-74305080 None:intergenic
TTGAACTACCAAAGAAGCAA+GGG 0.622309 1.2:+74305319 MS.gene51233:CDS
CCTGCAATTGAAACTAGCAA+AGG 0.625998 1.2:+74306105 MS.gene51233:CDS
TCCATCAACGAGAGTAACAA+AGG 0.627518 1.2:+74305599 MS.gene51233:CDS
AAACAGCAGCAGCATTCTCA+CGG 0.633676 1.2:-74306057 None:intergenic
TAGGACACCGAAAATCATCT+GGG 0.636004 1.2:-74305018 None:intergenic
CTTTGTGAAGGTACTCCAAG+AGG 0.641917 1.2:+74305788 MS.gene51233:CDS
CATGGAGGCGAGAGAAAACG+CGG 0.648697 1.2:+74305679 MS.gene51233:CDS
GTTGCAGCGAATCGAAGGGG+AGG 0.677232 1.2:+74306213 MS.gene51233:CDS
TGATATTGAACAGCAAAGGG+CGG 0.681387 1.2:+74305427 MS.gene51233:intron
AAAGGAACTATAGTAAACGC+AGG 0.682325 1.2:+74305617 MS.gene51233:CDS
CGTGCTCGCAGAAAATCCTG+AGG 0.685860 1.2:+74304943 MS.gene51233:CDS
ACTGTTGCAGCGAATCGAAG+GGG 0.696214 1.2:+74306210 MS.gene51233:CDS
CGATTTATGAAGGATGCGGG+CGG 0.720329 1.2:+74305905 MS.gene51233:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATCTATGTATTTATCA+AGG + chr1.2:74305836-74305855 MS.gene51233:CDS 15.0%
!!! ATTGTAGATGTTTTGAAAAA+CGG + chr1.2:74305653-74305672 MS.gene51233:CDS 20.0%
! GTATAACCTCAACTAAAATA+GGG - chr1.2:74306018-74306037 None:intergenic 25.0%
! TAATGATATTGAACAGCAAA+GGG + chr1.2:74305424-74305443 MS.gene51233:intron 25.0%
! TTCAAAACATCTACAATATC+TGG - chr1.2:74305650-74305669 None:intergenic 25.0%
! TTTCATATGTCTGCAAAATA+AGG - chr1.2:74305164-74305183 None:intergenic 25.0%
!! CTTATAAAGTTACTTTGTGA+AGG + chr1.2:74305776-74305795 MS.gene51233:CDS 25.0%
AAAGATCCTGCATTCAAAAA+TGG + chr1.2:74305181-74305200 MS.gene51233:CDS 30.0%
AAAGTAACTTTATAAGAGCC+GGG - chr1.2:74305772-74305791 None:intergenic 30.0%
AGAATGTTTCAATTAAGCAC+CGG + chr1.2:74304984-74305003 MS.gene51233:CDS 30.0%
ATATGTCTGCAAAATAAGGT+AGG - chr1.2:74305160-74305179 None:intergenic 30.0%
CAAAGTAACTTTATAAGAGC+CGG - chr1.2:74305773-74305792 None:intergenic 30.0%
CGTATAACCTCAACTAAAAT+AGG - chr1.2:74306019-74306038 None:intergenic 30.0%
GTAATGATATTGAACAGCAA+AGG + chr1.2:74305423-74305442 MS.gene51233:intron 30.0%
TCCTTCATAAATCGTATCAA+AGG - chr1.2:74305899-74305918 None:intergenic 30.0%
TCCTTTGATACGATTTATGA+AGG + chr1.2:74305895-74305914 MS.gene51233:CDS 30.0%
! AACTGCTATCAAAGCTTTAT+TGG + chr1.2:74305388-74305407 MS.gene51233:intron 30.0%
! AGTCTTTCAGTTTCTAAGAA+GGG - chr1.2:74304922-74304941 None:intergenic 30.0%
AAAGGAACTATAGTAAACGC+AGG + chr1.2:74305617-74305636 MS.gene51233:CDS 35.0%
ACCTCAACTAAAATAGGGAT+TGG - chr1.2:74306013-74306032 None:intergenic 35.0%
AGACTCTTCAAAACGTAGTT+AGG - chr1.2:74305270-74305289 None:intergenic 35.0%
AGCAAATTCTGTTTGAGCTT+TGG - chr1.2:74304709-74304728 None:intergenic 35.0%
AGTTGCAGAACAAAGAAATC+TGG + chr1.2:74305342-74305361 MS.gene51233:CDS 35.0%
ATACGATTTATGAAGGATGC+GGG + chr1.2:74305902-74305921 MS.gene51233:CDS 35.0%
ATGTTTCGCACAAAAAGGAT+TGG - chr1.2:74305100-74305119 None:intergenic 35.0%
ATTCAAAAATGGCTTGATGC+TGG + chr1.2:74305192-74305211 MS.gene51233:CDS 35.0%
CAAAACGTAGTTAGGAGTAA+GGG - chr1.2:74305262-74305281 None:intergenic 35.0%
CTTCAGGGATTATCAGAAAA+TGG + chr1.2:74306148-74306167 MS.gene51233:CDS 35.0%
GAACAATGTTTCGCACAAAA+AGG - chr1.2:74305105-74305124 None:intergenic 35.0%
GAATTGGTCATAACAAGCAA+CGG + chr1.2:74304864-74304883 MS.gene51233:intron 35.0%
GATACGATTTATGAAGGATG+CGG + chr1.2:74305901-74305920 MS.gene51233:CDS 35.0%
GATGAGAACAAAGTTGCAAT+AGG + chr1.2:74305731-74305750 MS.gene51233:CDS 35.0%
TCAAAACGTAGTTAGGAGTA+AGG - chr1.2:74305263-74305282 None:intergenic 35.0%
TGAAACATTCTCGTTCTCAT+AGG - chr1.2:74304975-74304994 None:intergenic 35.0%
TGTTTCGCACAAAAAGGATT+GGG - chr1.2:74305099-74305118 None:intergenic 35.0%
TTAGATCATTCATAGTCCTC+AGG - chr1.2:74304821-74304840 None:intergenic 35.0%
TTAGTTGAGGTTATACGAAC+CGG + chr1.2:74306022-74306041 MS.gene51233:CDS 35.0%
TTCATCAGTTCGAGAGATAT+AGG - chr1.2:74305040-74305059 None:intergenic 35.0%
TTGAAACTAGCAAAGGAACA+TGG + chr1.2:74306112-74306131 MS.gene51233:CDS 35.0%
TTGAACTACCAAAGAAGCAA+GGG + chr1.2:74305319-74305338 MS.gene51233:CDS 35.0%
! CAGTCTTTCAGTTTCTAAGA+AGG - chr1.2:74304923-74304942 None:intergenic 35.0%
! CTGTAATCCCAGATGATTTT+CGG + chr1.2:74305011-74305030 MS.gene51233:CDS 35.0%
!! AAAGTGTCTGCTGTGTTTTA+GGG - chr1.2:74305230-74305249 None:intergenic 35.0%
!! AACTAAAATAGGGATTGGCT+CGG - chr1.2:74306008-74306027 None:intergenic 35.0%
!! TGAAGAGTCTGATTGGTTTA+TGG + chr1.2:74305280-74305299 MS.gene51233:CDS 35.0%
!! TGCTGATTTACAACTAGACT+TGG + chr1.2:74304725-74304744 MS.gene51233:CDS 35.0%
!! TTTTGAGTATAGCAGGATCA+GGG - chr1.2:74304779-74304798 None:intergenic 35.0%
!!! AAAAGTGTCTGCTGTGTTTT+AGG - chr1.2:74305231-74305250 None:intergenic 35.0%
!!! ATCAAGCCATTTTTGAATGC+AGG - chr1.2:74305190-74305209 None:intergenic 35.0%
!!! TACGTTTTGAAGAGTCTGAT+TGG + chr1.2:74305273-74305292 MS.gene51233:CDS 35.0%
!!! TGTTTTGAAAAACGGAAGCA+TGG + chr1.2:74305661-74305680 MS.gene51233:CDS 35.0%
AAAGCTAGAGCTGTTAAAGC+CGG + chr1.2:74305863-74305882 MS.gene51233:CDS 40.0%
ATAACAAGCAACGGAGAACT+AGG + chr1.2:74304873-74304892 MS.gene51233:intron 40.0%
ATAGGACACCGAAAATCATC+TGG - chr1.2:74305022-74305041 None:intergenic 40.0%
CCTGCAATTGAAACTAGCAA+AGG + chr1.2:74306105-74306124 MS.gene51233:CDS 40.0%
GACCAATTCGTGTAATTCAG+TGG - chr1.2:74304853-74304872 None:intergenic 40.0%
GATAGAGCTAAGAGAAAAGC+TGG + chr1.2:74306175-74306194 MS.gene51233:CDS 40.0%
GCTATAATGACAATCCTTGC+AGG + chr1.2:74305950-74305969 MS.gene51233:CDS 40.0%
GGTTTATGGTGTGATAGCAA+TGG + chr1.2:74305294-74305313 MS.gene51233:CDS 40.0%
GTCCACTGAATTACACGAAT+TGG + chr1.2:74304848-74304867 MS.gene51233:CDS 40.0%
GTTGAACTACCAAAGAAGCA+AGG + chr1.2:74305318-74305337 MS.gene51233:CDS 40.0%
GTTTCGCACAAAAAGGATTG+GGG - chr1.2:74305098-74305117 None:intergenic 40.0%
TAACTTTATAAGAGCCGGGA+TGG - chr1.2:74305768-74305787 None:intergenic 40.0%
TAGGACACCGAAAATCATCT+GGG - chr1.2:74305021-74305040 None:intergenic 40.0%
TATCAAAGGAGCAACTATCC+CGG - chr1.2:74305885-74305904 None:intergenic 40.0%
TCCATCAACGAGAGTAACAA+AGG + chr1.2:74305599-74305618 MS.gene51233:CDS 40.0%
TCCTTTGTTACTCTCGTTGA+TGG - chr1.2:74305603-74305622 None:intergenic 40.0%
TCGGTTATCTGCATTTCTCT+TGG - chr1.2:74305477-74305496 None:intergenic 40.0%
TGATATTGAACAGCAAAGGG+CGG + chr1.2:74305427-74305446 MS.gene51233:intron 40.0%
TGTGCGAAACATTGTTCTGA+TGG + chr1.2:74305108-74305127 MS.gene51233:intron 40.0%
TTCTCATAGGTATCAACCTC+AGG - chr1.2:74304962-74304981 None:intergenic 40.0%
! CCTTTGCTAGTTTCAATTGC+AGG - chr1.2:74306108-74306127 None:intergenic 40.0%
! CGAAAATCATCTGGGATTAC+AGG - chr1.2:74305013-74305032 None:intergenic 40.0%
! GTTTCTAAGAAGGGATGAGA+CGG - chr1.2:74304913-74304932 None:intergenic 40.0%
! TTTGAAAAACGGAAGCATGG+AGG + chr1.2:74305664-74305683 MS.gene51233:CDS 40.0%
!! CTTTTGAGTATAGCAGGATC+AGG - chr1.2:74304780-74304799 None:intergenic 40.0%
!! GAGAGTCTTTTGAGTATAGC+AGG - chr1.2:74304786-74304805 None:intergenic 40.0%
!! TGTTTTGTGGTTGGTATGCA+CGG + chr1.2:74306075-74306094 MS.gene51233:CDS 40.0%
!!! GCCAATCCCTATTTTAGTTG+AGG + chr1.2:74306009-74306028 MS.gene51233:CDS 40.0%
AAACAGCAGCAGCATTCTCA+CGG - chr1.2:74306060-74306079 None:intergenic 45.0%
AAAGTTGCAATAGGTGCAGC+AGG + chr1.2:74305740-74305759 MS.gene51233:CDS 45.0%
AACTGTTGCAGCGAATCGAA+GGG + chr1.2:74306209-74306228 MS.gene51233:CDS 45.0%
AAGCTAGAGCTGTTAAAGCC+GGG + chr1.2:74305864-74305883 MS.gene51233:CDS 45.0%
CATGAAGGAAGGACAGCAAT+TGG + chr1.2:74305977-74305996 MS.gene51233:CDS 45.0%
CTGCTTCGGCAATACATACT+CGG - chr1.2:74305496-74305515 None:intergenic 45.0%
GACAACAAGTCTACGAGAAG+CGG - chr1.2:74305527-74305546 None:intergenic 45.0%
GATCCTGTAATCGTCTCAAC+CGG + chr1.2:74305061-74305080 MS.gene51233:CDS 45.0%
GATTGGGGATAATACCTGAC+CGG - chr1.2:74305083-74305102 None:intergenic 45.0%
TTGCTGTCCTTCCTTCATGA+TGG - chr1.2:74305976-74305995 None:intergenic 45.0%
!! CTTTGTGAAGGTACTCCAAG+AGG + chr1.2:74305788-74305807 MS.gene51233:CDS 45.0%
!! GTTTTGTGGTTGGTATGCAC+GGG + chr1.2:74306076-74306095 MS.gene51233:CDS 45.0%
!!! AGAATGCTGCTGCTGTTTTG+TGG + chr1.2:74306062-74306081 MS.gene51233:CDS 45.0%
!!! GCTGCATCTTTTTTGCCTCT+TGG - chr1.2:74305806-74305825 None:intergenic 45.0%
AAGCGGTATTGCTCCTGCTT+CGG - chr1.2:74305510-74305529 None:intergenic 50.0%
ACTGTTGCAGCGAATCGAAG+GGG + chr1.2:74306210-74306229 MS.gene51233:CDS 50.0%
AGGAAGGACAGCAATTGGTC+AGG + chr1.2:74305982-74306001 MS.gene51233:CDS 50.0%
ATCCTTGCAGGCCATCATGA+AGG + chr1.2:74305962-74305981 MS.gene51233:CDS 50.0%
CATTTCTCTTGGCCAGCAAC+CGG - chr1.2:74305466-74305485 None:intergenic 50.0%
CGAGTATGTATTGCCGAAGC+AGG + chr1.2:74305494-74305513 MS.gene51233:CDS 50.0%
CGATTTATGAAGGATGCGGG+CGG + chr1.2:74305905-74305924 MS.gene51233:CDS 50.0%
CTGCAACTCCCTTGCTTCTT+TGG - chr1.2:74305330-74305349 None:intergenic 50.0%
GAACTGTTGCAGCGAATCGA+AGG + chr1.2:74306208-74306227 MS.gene51233:CDS 50.0%
TCTCAGAGAAGTTGCACCTG+AGG + chr1.2:74304802-74304821 MS.gene51233:CDS 50.0%
TGACCGGTTGAGACGATTAC+AGG - chr1.2:74305067-74305086 None:intergenic 50.0%
TGTAATCGTCTCAACCGGTC+AGG + chr1.2:74305066-74305085 MS.gene51233:CDS 50.0%
TTCCACAGATCCTCGAACTC+AGG + chr1.2:74305547-74305566 MS.gene51233:CDS 50.0%
TTCCTTCATGATGGCCTGCA+AGG - chr1.2:74305967-74305986 None:intergenic 50.0%
TTGCAGGCCATCATGAAGGA+AGG + chr1.2:74305966-74305985 MS.gene51233:CDS 50.0%
! CATCTGGGATTACAGGAGAC+CGG - chr1.2:74305006-74305025 None:intergenic 50.0%
!! GGAGCAGAAGAAGCACTTCA+GGG + chr1.2:74306133-74306152 MS.gene51233:CDS 50.0%
!! TGGAGCAGAAGAAGCACTTC+AGG + chr1.2:74306132-74306151 MS.gene51233:CDS 50.0%
!!! TGCTGCTGCTGTTTTGTGGT+TGG + chr1.2:74306066-74306085 MS.gene51233:CDS 50.0%
!!! TGTCTGCTGTGTTTTAGGGC+AGG - chr1.2:74305226-74305245 None:intergenic 50.0%
CATGGAGGCGAGAGAAAACG+CGG + chr1.2:74305679-74305698 MS.gene51233:CDS 55.0%
CGTGCTCGCAGAAAATCCTG+AGG + chr1.2:74304943-74304962 MS.gene51233:CDS 55.0%
CTCCTGAGTTCGAGGATCTG+TGG - chr1.2:74305552-74305571 None:intergenic 55.0%
TTATGAAGGATGCGGGCGGT+GGG + chr1.2:74305909-74305928 MS.gene51233:CDS 55.0%
TTTATGAAGGATGCGGGCGG+TGG + chr1.2:74305908-74305927 MS.gene51233:CDS 55.0%
! TCCTCGAACTCAGGAGCATG+CGG + chr1.2:74305556-74305575 MS.gene51233:CDS 55.0%
ACCGCATGCTCCTGAGTTCG+AGG - chr1.2:74305560-74305579 None:intergenic 60.0%
CTCACGGTTGCGTGGTGATC+CGG - chr1.2:74306044-74306063 None:intergenic 60.0%
GCAGCATTCTCACGGTTGCG+TGG - chr1.2:74306052-74306071 None:intergenic 60.0%
GTTGCAGCGAATCGAAGGGG+AGG + chr1.2:74306213-74306232 MS.gene51233:CDS 60.0%
AGGTGCAGCAGGAGCCATCC+CGG + chr1.2:74305751-74305770 MS.gene51233:CDS 65.0%
GAACAGCAAAGGGCGGCTGC+TGG + chr1.2:74305434-74305453 MS.gene51233:intron 65.0%
TGCTGGTGAGCTCCGGTTGC+TGG + chr1.2:74305451-74305470 MS.gene51233:CDS 65.0%
GAAGGATGCGGGCGGTGGGA+TGG + chr1.2:74305913-74305932 MS.gene51233:CDS 70.0%
GGGCGGCTGCTGGTGAGCTC+CGG + chr1.2:74305444-74305463 MS.gene51233:CDS 75.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 74304675 74306255 74304675 ID=MS.gene51233
chr1.2 mRNA 74304675 74306255 74304675 ID=MS.gene51233.t1;Parent=MS.gene51233
chr1.2 exon 74304675 74304869 74304675 ID=MS.gene51233.t1.exon1;Parent=MS.gene51233.t1
chr1.2 CDS 74304675 74304869 74304675 ID=cds.MS.gene51233.t1;Parent=MS.gene51233.t1
chr1.2 exon 74304929 74305087 74304929 ID=MS.gene51233.t1.exon2;Parent=MS.gene51233.t1
chr1.2 CDS 74304929 74305087 74304929 ID=cds.MS.gene51233.t1;Parent=MS.gene51233.t1
chr1.2 exon 74305174 74305368 74305174 ID=MS.gene51233.t1.exon3;Parent=MS.gene51233.t1
chr1.2 CDS 74305174 74305368 74305174 ID=cds.MS.gene51233.t1;Parent=MS.gene51233.t1
chr1.2 exon 74305440 74306255 74305440 ID=MS.gene51233.t1.exon4;Parent=MS.gene51233.t1
chr1.2 CDS 74305440 74306255 74305440 ID=cds.MS.gene51233.t1;Parent=MS.gene51233.t1
Gene Sequence

>MS.gene51233

ATTGAACTAGTGCACGCTCAGTTCAAAAGAGCCAAAGCTCAAACAGAATTTGCTGATTTACAACTAGACTTGGATATAGCAGTAGCACAGAAAGATAAAGACCCTGATCCTGCTATACTCAAAAGACTCTCAGAGAAGTTGCACCTGAGGACTATGAATGATCTAAAGAAAGAGTCCACTGAATTACACGAATTGGTCATAACAAGCAACGGAGAACTAGGAGACAGTTTTGAAACCGTCTCATCCCTTCTTAGAAACTGAAAGACTGCGTGCTCGCAGAAAATCCTGAGGTTGATACCTATGAGAACGAGAATGTTTCAATTAAGCACCGGTCTCCTGTAATCCCAGATGATTTTCGGTGTCCTATATCTCTCGAACTGATGAAAGATCCTGTAATCGTCTCAACCGGTCAGGTATTATCCCCAATCCTTTTTGTGCGAAACATTGTTCTGATGGTGTCAGTTATGATTATTGATGAAATTCCTACCTTATTTTGCAGACATATGAAAGATCCTGCATTCAAAAATGGCTTGATGCTGGTCACAGAACCTGCCCTAAAACACAGCAGACACTTTTGCATACAGCCCTTACTCCTAACTACGTTTTGAAGAGTCTGATTGGTTTATGGTGTGATAGCAATGGTGTTGAACTACCAAAGAAGCAAGGGAGTTGCAGAACAAAGAAATCTGGAACAGTCTTTCAGATTGTGACAGAACTGCTATCAAAGCTTTATTGGATAAGCTAACAAGTAATGATATTGAACAGCAAAGGGCGGCTGCTGGTGAGCTCCGGTTGCTGGCCAAGAGAAATGCAGATAACCGAGTATGTATTGCCGAAGCAGGAGCAATACCGCTTCTCGTAGACTTGTTGTCTTCCACAGATCCTCGAACTCAGGAGCATGCGGTTACAGCACTTCTGAATCTTTCCATCAACGAGAGTAACAAAGGAACTATAGTAAACGCAGGAGCTATACCAGATATTGTAGATGTTTTGAAAAACGGAAGCATGGAGGCGAGAGAAAACGCGGCTGCGACTCTCTTTAGTTTATCAGTTCTTGATGAGAACAAAGTTGCAATAGGTGCAGCAGGAGCCATCCCGGCTCTTATAAAGTTACTTTGTGAAGGTACTCCAAGAGGCAAAAAAGATGCAGCTACTGCTATATTTAATCTATGTATTTATCAAGGAAACAAAGCTAGAGCTGTTAAAGCCGGGATAGTTGCTCCTTTGATACGATTTATGAAGGATGCGGGCGGTGGGATGGTTGACGAAGCACTAGCTATAATGACAATCCTTGCAGGCCATCATGAAGGAAGGACAGCAATTGGTCAGGCCGAGCCAATCCCTATTTTAGTTGAGGTTATACGAACCGGATCACCACGCAACCGTGAGAATGCTGCTGCTGTTTTGTGGTTGGTATGCACGGGAGATCTCCTGCAATTGAAACTAGCAAAGGAACATGGAGCAGAAGAAGCACTTCAGGGATTATCAGAAAATGGAACTGATAGAGCTAAGAGAAAAGCTGGAAGTATGTTAGAACTGTTGCAGCGAATCGAAGGGGAGGATAGTTTGCAAAATACCTAG

Protein sequence

>MS.gene51233.t1

IELVHAQFKRAKAQTEFADLQLDLDIAVAQKDKDPDPAILKRLSEKLHLRTMNDLKKESTELHELKLKDCVLAENPEVDTYENENVSIKHRSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHRTCPKTQQTLLHTALTPNYVLKSLIGLWCDSNGVELPKKQGSCRTKKSGTQRAAAGELRLLAKRNADNRVCIAEAGAIPLLVDLLSSTDPRTQEHAVTALLNLSINESNKGTIVNAGAIPDIVDVLKNGSMEARENAAATLFSLSVLDENKVAIGAAGAIPALIKLLCEGTPRGKKDAATAIFNLCIYQGNKARAVKAGIVAPLIRFMKDAGGGMVDEALAIMTILAGHHEGRTAIGQAEPIPILVEVIRTGSPRNRENAAAVLWLVCTGDLLQLKLAKEHGAEEALQGLSENGTDRAKRKAGSMLELLQRIEGEDSLQNT