Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51233.t1 | RHN81458.1 | 89 | 498 | 11 | 2 | 1 | 454 | 133 | 630 | 6.90E-154 | 553.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51233.t1 | Q5VRH9 | 59.8 | 495 | 155 | 3 | 1 | 452 | 114 | 607 | 3.5e-82 | 307.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51233.t1 | A0A396JZJ0 | 89.0 | 498 | 11 | 2 | 1 | 454 | 133 | 630 | 5.0e-154 | 553.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049283 | MS.gene51233 | 0.871833 | 5.06E-67 | -1.69E-46 |
MS.gene049499 | MS.gene51233 | 0.809293 | 2.03E-50 | -1.69E-46 |
MS.gene049983 | MS.gene51233 | 0.816318 | 5.88E-52 | -1.69E-46 |
MS.gene050379 | MS.gene51233 | 0.826577 | 2.51E-54 | -1.69E-46 |
MS.gene050646 | MS.gene51233 | 0.807601 | 4.67E-50 | -1.69E-46 |
MS.gene050945 | MS.gene51233 | 0.815554 | 8.71E-52 | -1.69E-46 |
MS.gene051959 | MS.gene51233 | 0.834418 | 3.03E-56 | -1.69E-46 |
MS.gene051960 | MS.gene51233 | 0.830673 | 2.57E-55 | -1.69E-46 |
MS.gene052016 | MS.gene51233 | 0.808881 | 2.49E-50 | -1.69E-46 |
MS.gene052118 | MS.gene51233 | 0.851817 | 6.93E-61 | -1.69E-46 |
MS.gene052533 | MS.gene51233 | 0.801291 | 9.65E-49 | -1.69E-46 |
MS.gene053963 | MS.gene51233 | 0.802752 | 4.83E-49 | -1.69E-46 |
MS.gene054892 | MS.gene51233 | 0.870866 | 1.06E-66 | -1.69E-46 |
MS.gene054893 | MS.gene51233 | 0.864799 | 9.38E-65 | -1.69E-46 |
MS.gene054957 | MS.gene51233 | 0.857836 | 1.24E-62 | -1.69E-46 |
MS.gene055229 | MS.gene51233 | 0.813121 | 3.00E-51 | -1.69E-46 |
MS.gene05686 | MS.gene51233 | 0.81255 | 4.01E-51 | -1.69E-46 |
MS.gene056973 | MS.gene51233 | 0.838632 | 2.56E-57 | -1.69E-46 |
MS.gene057102 | MS.gene51233 | 0.812171 | 4.85E-51 | -1.69E-46 |
MS.gene057174 | MS.gene51233 | 0.80821 | 3.46E-50 | -1.69E-46 |
MS.gene057622 | MS.gene51233 | 0.80418 | 2.45E-49 | -1.69E-46 |
MS.gene057919 | MS.gene51233 | 0.820224 | 7.68E-53 | -1.69E-46 |
MS.gene058279 | MS.gene51233 | 0.812701 | 3.71E-51 | -1.69E-46 |
MS.gene058592 | MS.gene51233 | 0.825711 | 4.04E-54 | -1.69E-46 |
MS.gene05952 | MS.gene51233 | 0.825032 | 5.85E-54 | -1.69E-46 |
MS.gene059686 | MS.gene51233 | 0.810535 | 1.10E-50 | -1.69E-46 |
MS.gene05985 | MS.gene51233 | -0.83978 | 1.29E-57 | -1.69E-46 |
MS.gene059901 | MS.gene51233 | -0.811128 | 8.17E-51 | -1.69E-46 |
MS.gene060413 | MS.gene51233 | 0.828003 | 1.14E-54 | -1.69E-46 |
MS.gene060522 | MS.gene51233 | 0.801917 | 7.18E-49 | -1.69E-46 |
MS.gene060933 | MS.gene51233 | 0.836503 | 9.01E-57 | -1.69E-46 |
MS.gene060935 | MS.gene51233 | 0.8107 | 1.01E-50 | -1.69E-46 |
MS.gene060937 | MS.gene51233 | 0.83469 | 2.59E-56 | -1.69E-46 |
MS.gene061188 | MS.gene51233 | 0.81111 | 8.25E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene51233 | MS.gene023937 | PPI |
MS.gene51233 | MS.gene85423 | PPI |
MS.gene51233 | MS.gene023939 | PPI |
MS.gene51233 | MS.gene058533 | PPI |
MS.gene51233 | MS.gene058531 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51233.t1 | MTR_1g094215 | 89.357 | 498 | 9 | 2 | 1 | 454 | 133 | 630 | 0.0 | 886 |
MS.gene51233.t1 | MTR_1g094215 | 88.143 | 447 | 9 | 2 | 52 | 454 | 1 | 447 | 0.0 | 782 |
MS.gene51233.t1 | MTR_4g063800 | 55.268 | 503 | 167 | 4 | 1 | 445 | 127 | 629 | 2.38e-180 | 520 |
MS.gene51233.t1 | MTR_4g485520 | 55.937 | 379 | 141 | 1 | 94 | 446 | 104 | 482 | 1.72e-144 | 422 |
MS.gene51233.t1 | MTR_4g485520 | 55.937 | 379 | 141 | 1 | 94 | 446 | 272 | 650 | 3.42e-142 | 422 |
MS.gene51233.t1 | MTR_7g059405 | 47.233 | 506 | 201 | 7 | 1 | 442 | 129 | 632 | 2.61e-136 | 406 |
MS.gene51233.t1 | MTR_7g078330 | 43.089 | 492 | 234 | 5 | 1 | 446 | 153 | 644 | 6.91e-126 | 379 |
MS.gene51233.t1 | MTR_5g083030 | 45.802 | 393 | 170 | 6 | 95 | 444 | 293 | 685 | 2.46e-105 | 328 |
MS.gene51233.t1 | MTR_2g018010 | 44.330 | 388 | 178 | 9 | 95 | 446 | 292 | 677 | 4.51e-87 | 281 |
MS.gene51233.t1 | MTR_7g053260 | 39.221 | 385 | 200 | 9 | 90 | 445 | 73 | 452 | 4.46e-82 | 261 |
MS.gene51233.t1 | MTR_3g466220 | 53.061 | 294 | 135 | 2 | 148 | 439 | 509 | 801 | 1.11e-78 | 261 |
MS.gene51233.t1 | MTR_3g466220 | 40.523 | 153 | 75 | 3 | 32 | 169 | 135 | 286 | 1.68e-28 | 119 |
MS.gene51233.t1 | MTR_3g466220 | 53.061 | 294 | 135 | 2 | 148 | 439 | 530 | 822 | 1.79e-78 | 260 |
MS.gene51233.t1 | MTR_3g466220 | 40.523 | 153 | 75 | 3 | 32 | 169 | 156 | 307 | 1.88e-28 | 119 |
MS.gene51233.t1 | MTR_1g093965 | 51.515 | 264 | 59 | 3 | 108 | 371 | 1 | 195 | 1.87e-77 | 240 |
MS.gene51233.t1 | MTR_7g116600 | 37.442 | 430 | 225 | 11 | 49 | 444 | 33 | 452 | 2.37e-76 | 246 |
MS.gene51233.t1 | MTR_1g093995 | 50.758 | 264 | 61 | 3 | 108 | 371 | 1 | 195 | 3.25e-75 | 234 |
MS.gene51233.t1 | MTR_2g026130 | 48.315 | 267 | 138 | 0 | 184 | 450 | 190 | 456 | 6.98e-70 | 229 |
MS.gene51233.t1 | MTR_3g103050 | 42.623 | 305 | 170 | 2 | 145 | 444 | 26 | 330 | 2.76e-67 | 219 |
MS.gene51233.t1 | MTR_7g097020 | 49.430 | 263 | 132 | 1 | 177 | 439 | 490 | 751 | 6.26e-67 | 228 |
MS.gene51233.t1 | MTR_7g097020 | 62.500 | 72 | 27 | 0 | 99 | 170 | 245 | 316 | 2.58e-25 | 109 |
MS.gene51233.t1 | MTR_1g069845 | 50.198 | 253 | 125 | 1 | 187 | 439 | 341 | 592 | 6.30e-66 | 222 |
MS.gene51233.t1 | MTR_1g069845 | 63.235 | 68 | 25 | 0 | 95 | 162 | 124 | 191 | 2.03e-24 | 106 |
MS.gene51233.t1 | MTR_4g107010 | 32.353 | 510 | 278 | 11 | 1 | 443 | 155 | 664 | 8.34e-66 | 225 |
MS.gene51233.t1 | MTR_1g018180 | 44.061 | 261 | 146 | 0 | 184 | 444 | 76 | 336 | 1.12e-65 | 214 |
MS.gene51233.t1 | MTR_1g079450 | 38.860 | 386 | 206 | 8 | 90 | 447 | 58 | 441 | 1.88e-65 | 217 |
MS.gene51233.t1 | MTR_1g069845 | 49.609 | 256 | 128 | 1 | 184 | 439 | 455 | 709 | 4.01e-65 | 223 |
MS.gene51233.t1 | MTR_1g069845 | 63.235 | 68 | 25 | 0 | 95 | 162 | 241 | 308 | 5.54e-24 | 105 |
MS.gene51233.t1 | MTR_1g069845 | 49.609 | 256 | 128 | 1 | 184 | 439 | 459 | 713 | 4.63e-65 | 223 |
MS.gene51233.t1 | MTR_1g069845 | 63.235 | 68 | 25 | 0 | 95 | 162 | 245 | 312 | 5.04e-24 | 105 |
MS.gene51233.t1 | MTR_1g094025 | 49.802 | 253 | 96 | 7 | 1 | 252 | 53 | 275 | 1.86e-63 | 207 |
MS.gene51233.t1 | MTR_1g094025 | 67.826 | 115 | 14 | 1 | 245 | 359 | 188 | 279 | 4.79e-37 | 137 |
MS.gene51233.t1 | MTR_3g078160 | 34.430 | 395 | 219 | 10 | 94 | 451 | 274 | 665 | 5.26e-62 | 213 |
MS.gene51233.t1 | MTR_3g078160 | 34.430 | 395 | 219 | 10 | 94 | 451 | 274 | 665 | 6.14e-62 | 213 |
MS.gene51233.t1 | MTR_4g028960 | 37.245 | 392 | 200 | 9 | 94 | 444 | 279 | 665 | 2.43e-60 | 209 |
MS.gene51233.t1 | MTR_3g078160 | 41.729 | 266 | 120 | 7 | 94 | 327 | 274 | 536 | 2.15e-50 | 179 |
MS.gene51233.t1 | MTR_4g091880 | 35.135 | 370 | 212 | 9 | 95 | 443 | 5 | 367 | 4.36e-47 | 167 |
MS.gene51233.t1 | MTR_5g034440 | 34.896 | 384 | 213 | 8 | 97 | 443 | 282 | 665 | 2.24e-46 | 171 |
MS.gene51233.t1 | MTR_4g091880 | 33.058 | 363 | 201 | 9 | 95 | 443 | 5 | 339 | 3.82e-44 | 158 |
MS.gene51233.t1 | MTR_2g011140 | 30.914 | 372 | 223 | 8 | 97 | 443 | 17 | 379 | 7.41e-43 | 155 |
MS.gene51233.t1 | MTR_3g078340 | 35.926 | 270 | 168 | 2 | 177 | 443 | 219 | 486 | 4.23e-39 | 148 |
MS.gene51233.t1 | MTR_3g085610 | 31.126 | 302 | 182 | 9 | 93 | 384 | 278 | 563 | 1.11e-34 | 137 |
MS.gene51233.t1 | MTR_3g085610 | 27.407 | 270 | 182 | 7 | 190 | 449 | 448 | 713 | 1.04e-17 | 86.3 |
MS.gene51233.t1 | MTR_4g085720 | 30.256 | 390 | 240 | 10 | 95 | 454 | 14 | 401 | 2.18e-33 | 130 |
MS.gene51233.t1 | MTR_5g015210 | 28.571 | 322 | 215 | 6 | 95 | 401 | 67 | 388 | 1.53e-32 | 129 |
MS.gene51233.t1 | MTR_8g080280 | 25.455 | 440 | 237 | 10 | 96 | 450 | 283 | 716 | 2.79e-32 | 130 |
MS.gene51233.t1 | MTR_2g007630 | 34.956 | 226 | 113 | 6 | 108 | 331 | 1 | 194 | 1.49e-30 | 119 |
MS.gene51233.t1 | MTR_1g017770 | 28.448 | 348 | 222 | 9 | 95 | 422 | 45 | 385 | 1.31e-29 | 120 |
MS.gene51233.t1 | MTR_5g069340 | 35.955 | 267 | 164 | 5 | 183 | 443 | 48 | 313 | 4.21e-29 | 117 |
MS.gene51233.t1 | MTR_6g008170 | 31.349 | 252 | 168 | 2 | 191 | 439 | 260 | 509 | 5.66e-29 | 119 |
MS.gene51233.t1 | MTR_3g065080 | 26.100 | 341 | 208 | 7 | 95 | 397 | 36 | 370 | 1.90e-28 | 117 |
MS.gene51233.t1 | MTR_3g095730 | 28.650 | 363 | 213 | 11 | 95 | 420 | 13 | 366 | 3.01e-28 | 116 |
MS.gene51233.t1 | MTR_5g048050 | 27.805 | 410 | 238 | 15 | 94 | 451 | 24 | 427 | 4.64e-27 | 113 |
MS.gene51233.t1 | MTR_1g056840 | 28.904 | 301 | 158 | 9 | 99 | 343 | 11 | 311 | 6.88e-27 | 112 |
MS.gene51233.t1 | MTR_8g092870 | 26.776 | 366 | 218 | 12 | 95 | 420 | 10 | 365 | 3.37e-26 | 110 |
MS.gene51233.t1 | MTR_3g106140 | 31.338 | 284 | 181 | 6 | 177 | 448 | 118 | 399 | 9.60e-26 | 110 |
MS.gene51233.t1 | MTR_1g014420 | 31.408 | 277 | 176 | 6 | 184 | 448 | 144 | 418 | 1.15e-25 | 109 |
MS.gene51233.t1 | MTR_6g071340 | 27.970 | 404 | 241 | 15 | 94 | 449 | 4 | 405 | 1.42e-25 | 108 |
MS.gene51233.t1 | MTR_1g056880 | 29.139 | 302 | 158 | 10 | 99 | 344 | 11 | 312 | 3.31e-25 | 107 |
MS.gene51233.t1 | MTR_2g087350 | 30.968 | 310 | 165 | 10 | 95 | 366 | 6 | 304 | 6.94e-25 | 106 |
MS.gene51233.t1 | MTR_8g077205 | 56.000 | 75 | 33 | 0 | 96 | 170 | 164 | 238 | 1.74e-24 | 107 |
MS.gene51233.t1 | MTR_8g077205 | 56.000 | 75 | 33 | 0 | 96 | 170 | 276 | 350 | 2.24e-24 | 107 |
MS.gene51233.t1 | MTR_7g106340 | 30.345 | 290 | 164 | 10 | 90 | 341 | 3 | 292 | 3.23e-24 | 104 |
MS.gene51233.t1 | MTR_5g077510 | 25.000 | 388 | 247 | 13 | 95 | 442 | 35 | 418 | 2.45e-23 | 102 |
MS.gene51233.t1 | MTR_1g056870 | 28.239 | 301 | 160 | 10 | 99 | 343 | 11 | 311 | 5.91e-23 | 101 |
MS.gene51233.t1 | MTR_5g020570 | 53.333 | 75 | 35 | 0 | 96 | 170 | 274 | 348 | 1.73e-22 | 101 |
MS.gene51233.t1 | MTR_5g020570 | 53.333 | 75 | 35 | 0 | 96 | 170 | 289 | 363 | 2.28e-22 | 100 |
MS.gene51233.t1 | MTR_1g094205 | 58.333 | 84 | 11 | 1 | 164 | 223 | 22 | 105 | 1.77e-20 | 86.7 |
MS.gene51233.t1 | MTR_5g079550 | 30.496 | 282 | 176 | 8 | 187 | 453 | 38 | 314 | 2.69e-19 | 89.7 |
MS.gene51233.t1 | MTR_3g096370 | 55.224 | 67 | 30 | 0 | 95 | 161 | 10 | 76 | 2.81e-19 | 89.7 |
MS.gene51233.t1 | MTR_3g115670 | 27.170 | 265 | 171 | 9 | 90 | 338 | 26 | 284 | 4.09e-19 | 90.9 |
MS.gene51233.t1 | MTR_8g039560 | 32.852 | 277 | 163 | 13 | 190 | 448 | 29 | 300 | 1.24e-18 | 87.0 |
MS.gene51233.t1 | MTR_6g004790 | 28.938 | 273 | 179 | 7 | 181 | 443 | 14 | 281 | 3.55e-17 | 82.8 |
MS.gene51233.t1 | MTR_3g067685 | 31.939 | 263 | 170 | 6 | 187 | 443 | 59 | 318 | 4.31e-17 | 83.2 |
MS.gene51233.t1 | MTR_7g117890 | 30.859 | 256 | 164 | 8 | 93 | 339 | 252 | 503 | 1.70e-16 | 82.8 |
MS.gene51233.t1 | MTR_1g056910 | 37.500 | 136 | 61 | 5 | 95 | 210 | 6 | 137 | 7.34e-16 | 79.7 |
MS.gene51233.t1 | MTR_1g090320 | 34.783 | 138 | 71 | 3 | 96 | 215 | 516 | 652 | 1.18e-15 | 80.5 |
MS.gene51233.t1 | MTR_1g090320 | 34.783 | 138 | 71 | 3 | 96 | 215 | 514 | 650 | 1.27e-15 | 80.1 |
MS.gene51233.t1 | MTR_4g051515 | 34.752 | 141 | 70 | 4 | 95 | 215 | 6 | 144 | 1.50e-14 | 75.5 |
MS.gene51233.t1 | MTR_8g103227 | 46.053 | 76 | 40 | 1 | 96 | 170 | 396 | 471 | 1.57e-14 | 76.6 |
MS.gene51233.t1 | MTR_5g032010 | 44.286 | 70 | 39 | 0 | 92 | 161 | 729 | 798 | 7.46e-14 | 74.3 |
MS.gene51233.t1 | MTR_1g100820 | 50.000 | 66 | 33 | 0 | 96 | 161 | 649 | 714 | 9.76e-14 | 73.9 |
MS.gene51233.t1 | MTR_1g100820 | 50.000 | 66 | 33 | 0 | 96 | 161 | 647 | 712 | 1.01e-13 | 73.9 |
MS.gene51233.t1 | MTR_7g007780 | 32.022 | 178 | 116 | 2 | 198 | 370 | 588 | 765 | 2.29e-13 | 72.8 |
MS.gene51233.t1 | MTR_7g077780 | 45.714 | 70 | 38 | 0 | 96 | 165 | 827 | 896 | 6.39e-13 | 71.6 |
MS.gene51233.t1 | MTR_4g125930 | 36.752 | 117 | 60 | 3 | 58 | 161 | 641 | 756 | 1.49e-12 | 70.1 |
MS.gene51233.t1 | MTR_8g027140 | 28.745 | 247 | 168 | 6 | 99 | 339 | 263 | 507 | 1.69e-12 | 70.1 |
MS.gene51233.t1 | MTR_4g125930 | 36.752 | 117 | 60 | 3 | 58 | 161 | 441 | 556 | 1.98e-12 | 69.7 |
MS.gene51233.t1 | MTR_7g005940 | 43.056 | 72 | 38 | 2 | 92 | 161 | 592 | 662 | 2.13e-12 | 70.1 |
MS.gene51233.t1 | MTR_7g005940 | 43.056 | 72 | 38 | 2 | 92 | 161 | 592 | 662 | 2.35e-12 | 69.7 |
MS.gene51233.t1 | MTR_5g005940 | 31.548 | 168 | 113 | 2 | 183 | 348 | 209 | 376 | 2.74e-12 | 69.3 |
MS.gene51233.t1 | MTR_5g005940 | 31.548 | 168 | 113 | 2 | 183 | 348 | 209 | 376 | 2.85e-12 | 69.3 |
MS.gene51233.t1 | MTR_1g104870 | 30.952 | 168 | 114 | 2 | 183 | 348 | 212 | 379 | 3.16e-12 | 69.3 |
MS.gene51233.t1 | MTR_2g096850 | 42.857 | 84 | 46 | 2 | 82 | 164 | 728 | 810 | 1.21e-11 | 67.4 |
MS.gene51233.t1 | MTR_2g096850 | 42.857 | 84 | 46 | 2 | 82 | 164 | 577 | 659 | 1.24e-11 | 67.4 |
MS.gene51233.t1 | MTR_7g094910 | 29.688 | 192 | 133 | 2 | 183 | 372 | 199 | 390 | 1.31e-11 | 67.0 |
MS.gene51233.t1 | MTR_7g094900 | 29.688 | 192 | 133 | 2 | 183 | 372 | 218 | 409 | 1.36e-11 | 67.0 |
MS.gene51233.t1 | MTR_7g094910 | 29.688 | 192 | 133 | 2 | 183 | 372 | 199 | 390 | 1.43e-11 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51233.t1 | AT3G54850 | 66.870 | 492 | 118 | 2 | 1 | 447 | 134 | 625 | 0.0 | 630 |
MS.gene51233.t1 | AT3G46510 | 54.762 | 504 | 166 | 6 | 1 | 445 | 130 | 630 | 3.40e-179 | 516 |
MS.gene51233.t1 | AT2G28830 | 47.741 | 509 | 199 | 8 | 1 | 445 | 58 | 563 | 1.41e-150 | 441 |
MS.gene51233.t1 | AT1G23030 | 53.944 | 393 | 160 | 3 | 73 | 444 | 217 | 609 | 7.78e-135 | 401 |
MS.gene51233.t1 | AT1G71020 | 54.476 | 391 | 150 | 3 | 82 | 444 | 82 | 472 | 5.68e-133 | 392 |
MS.gene51233.t1 | AT1G71020 | 53.885 | 399 | 156 | 3 | 74 | 444 | 222 | 620 | 1.19e-130 | 391 |
MS.gene51233.t1 | AT5G42340 | 45.738 | 481 | 220 | 4 | 7 | 446 | 178 | 658 | 6.07e-126 | 380 |
MS.gene51233.t1 | AT3G07360 | 40.526 | 380 | 193 | 9 | 96 | 444 | 75 | 452 | 2.34e-82 | 261 |
MS.gene51233.t1 | AT2G23140 | 56.322 | 261 | 113 | 1 | 183 | 443 | 368 | 627 | 1.68e-81 | 264 |
MS.gene51233.t1 | AT2G23140 | 61.644 | 73 | 28 | 0 | 98 | 170 | 44 | 116 | 2.43e-27 | 115 |
MS.gene51233.t1 | AT2G23140 | 56.322 | 261 | 113 | 1 | 183 | 443 | 368 | 627 | 1.68e-81 | 264 |
MS.gene51233.t1 | AT2G23140 | 61.644 | 73 | 28 | 0 | 98 | 170 | 44 | 116 | 2.43e-27 | 115 |
MS.gene51233.t1 | AT2G23140 | 56.322 | 261 | 113 | 1 | 183 | 443 | 560 | 819 | 2.39e-80 | 265 |
MS.gene51233.t1 | AT2G23140 | 40.385 | 156 | 78 | 2 | 35 | 176 | 160 | 314 | 2.16e-28 | 119 |
MS.gene51233.t1 | AT2G23140 | 56.322 | 261 | 113 | 1 | 183 | 443 | 557 | 816 | 2.80e-80 | 265 |
MS.gene51233.t1 | AT2G23140 | 40.385 | 156 | 78 | 2 | 35 | 176 | 157 | 311 | 2.36e-28 | 119 |
MS.gene51233.t1 | AT2G23140 | 56.322 | 261 | 113 | 1 | 183 | 443 | 557 | 816 | 2.80e-80 | 265 |
MS.gene51233.t1 | AT2G23140 | 40.385 | 156 | 78 | 2 | 35 | 176 | 157 | 311 | 2.36e-28 | 119 |
MS.gene51233.t1 | AT1G29340 | 42.377 | 387 | 186 | 9 | 95 | 446 | 305 | 689 | 9.97e-74 | 246 |
MS.gene51233.t1 | AT3G01400 | 44.828 | 261 | 144 | 0 | 184 | 444 | 80 | 340 | 9.67e-68 | 220 |
MS.gene51233.t1 | AT5G01830 | 37.560 | 418 | 217 | 11 | 65 | 450 | 246 | 651 | 1.42e-64 | 220 |
MS.gene51233.t1 | AT5G67340 | 47.710 | 262 | 135 | 2 | 183 | 443 | 437 | 697 | 1.75e-63 | 218 |
MS.gene51233.t1 | AT5G67340 | 29.087 | 416 | 243 | 10 | 30 | 398 | 161 | 571 | 3.87e-41 | 156 |
MS.gene51233.t1 | AT5G67340 | 47.710 | 262 | 135 | 2 | 183 | 443 | 437 | 697 | 1.75e-63 | 218 |
MS.gene51233.t1 | AT5G67340 | 29.087 | 416 | 243 | 10 | 30 | 398 | 161 | 571 | 3.87e-41 | 156 |
MS.gene51233.t1 | AT4G16490 | 46.377 | 276 | 146 | 1 | 177 | 450 | 193 | 468 | 1.48e-60 | 205 |
MS.gene51233.t1 | AT5G58680 | 41.221 | 262 | 153 | 1 | 184 | 444 | 78 | 339 | 6.04e-60 | 200 |
MS.gene51233.t1 | AT3G54790 | 49.242 | 264 | 129 | 3 | 180 | 439 | 446 | 708 | 7.79e-59 | 206 |
MS.gene51233.t1 | AT3G54790 | 45.361 | 97 | 51 | 1 | 95 | 191 | 202 | 296 | 1.25e-22 | 101 |
MS.gene51233.t1 | AT3G54790 | 29.891 | 184 | 125 | 4 | 218 | 398 | 404 | 586 | 4.60e-13 | 72.0 |
MS.gene51233.t1 | AT3G54790 | 49.242 | 264 | 129 | 3 | 180 | 439 | 482 | 744 | 1.37e-58 | 205 |
MS.gene51233.t1 | AT3G54790 | 45.361 | 97 | 51 | 1 | 95 | 191 | 238 | 332 | 1.63e-22 | 101 |
MS.gene51233.t1 | AT3G54790 | 29.891 | 184 | 125 | 4 | 218 | 398 | 440 | 622 | 5.07e-13 | 71.6 |
MS.gene51233.t1 | AT3G54790 | 49.242 | 264 | 129 | 3 | 180 | 439 | 482 | 744 | 1.37e-58 | 205 |
MS.gene51233.t1 | AT3G54790 | 45.361 | 97 | 51 | 1 | 95 | 191 | 238 | 332 | 1.63e-22 | 101 |
MS.gene51233.t1 | AT3G54790 | 29.891 | 184 | 125 | 4 | 218 | 398 | 440 | 622 | 5.07e-13 | 71.6 |
MS.gene51233.t1 | AT5G18320 | 35.733 | 389 | 208 | 12 | 92 | 445 | 68 | 449 | 1.52e-53 | 186 |
MS.gene51233.t1 | AT1G60190 | 32.558 | 387 | 224 | 11 | 97 | 446 | 280 | 666 | 3.63e-48 | 176 |
MS.gene51233.t1 | AT1G27910 | 29.263 | 434 | 227 | 8 | 94 | 449 | 278 | 709 | 5.43e-48 | 176 |
MS.gene51233.t1 | AT3G07360 | 36.364 | 319 | 170 | 9 | 157 | 444 | 1 | 317 | 1.08e-47 | 167 |
MS.gene51233.t1 | AT3G07360 | 36.364 | 319 | 170 | 9 | 157 | 444 | 1 | 317 | 1.08e-47 | 167 |
MS.gene51233.t1 | AT3G07360 | 36.364 | 319 | 170 | 9 | 157 | 444 | 1 | 317 | 1.08e-47 | 167 |
MS.gene51233.t1 | AT3G07360 | 36.364 | 319 | 170 | 9 | 157 | 444 | 1 | 317 | 1.08e-47 | 167 |
MS.gene51233.t1 | AT3G07360 | 36.364 | 319 | 170 | 9 | 157 | 444 | 1 | 317 | 1.08e-47 | 167 |
MS.gene51233.t1 | AT3G07360 | 36.364 | 319 | 170 | 9 | 157 | 444 | 1 | 317 | 1.08e-47 | 167 |
MS.gene51233.t1 | AT3G07360 | 36.364 | 319 | 170 | 9 | 157 | 444 | 1 | 317 | 1.08e-47 | 167 |
MS.gene51233.t1 | AT3G07360 | 36.364 | 319 | 170 | 9 | 157 | 444 | 1 | 317 | 1.08e-47 | 167 |
MS.gene51233.t1 | AT3G07360 | 36.364 | 319 | 170 | 9 | 157 | 444 | 1 | 317 | 1.08e-47 | 167 |
MS.gene51233.t1 | AT4G21350 | 32.425 | 367 | 225 | 7 | 95 | 442 | 5 | 367 | 1.04e-45 | 163 |
MS.gene51233.t1 | AT5G18330 | 29.777 | 403 | 237 | 13 | 73 | 445 | 53 | 439 | 1.67e-39 | 148 |
MS.gene51233.t1 | AT5G65200 | 35.556 | 270 | 161 | 3 | 191 | 449 | 248 | 515 | 6.88e-37 | 142 |
MS.gene51233.t1 | AT1G10560 | 28.372 | 430 | 245 | 13 | 70 | 446 | 258 | 677 | 1.06e-36 | 143 |
MS.gene51233.t1 | AT5G62560 | 37.008 | 254 | 153 | 3 | 191 | 439 | 258 | 509 | 2.39e-36 | 141 |
MS.gene51233.t1 | AT1G49780 | 32.836 | 402 | 215 | 13 | 95 | 450 | 14 | 406 | 4.28e-35 | 135 |
MS.gene51233.t1 | AT5G18340 | 29.427 | 384 | 232 | 11 | 95 | 442 | 74 | 454 | 1.10e-33 | 132 |
MS.gene51233.t1 | AT3G19380 | 33.430 | 344 | 195 | 11 | 95 | 404 | 14 | 357 | 2.18e-33 | 130 |
MS.gene51233.t1 | AT5G65920 | 28.421 | 380 | 227 | 10 | 93 | 441 | 58 | 423 | 2.61e-33 | 130 |
MS.gene51233.t1 | AT5G65920 | 28.421 | 380 | 227 | 10 | 93 | 441 | 58 | 423 | 2.61e-33 | 130 |
MS.gene51233.t1 | AT5G40140 | 33.582 | 268 | 171 | 4 | 191 | 453 | 252 | 517 | 3.92e-32 | 129 |
MS.gene51233.t1 | AT5G40140 | 26.176 | 340 | 195 | 10 | 95 | 398 | 58 | 377 | 2.91e-19 | 90.9 |
MS.gene51233.t1 | AT3G49810 | 28.418 | 373 | 232 | 10 | 95 | 441 | 64 | 427 | 5.04e-31 | 124 |
MS.gene51233.t1 | AT4G31890 | 34.694 | 294 | 170 | 9 | 174 | 454 | 155 | 439 | 7.03e-31 | 125 |
MS.gene51233.t1 | AT4G31890 | 34.694 | 294 | 170 | 9 | 174 | 454 | 155 | 439 | 7.03e-31 | 125 |
MS.gene51233.t1 | AT4G31890 | 34.694 | 294 | 170 | 9 | 174 | 454 | 155 | 439 | 7.03e-31 | 125 |
MS.gene51233.t1 | AT1G24330 | 54.444 | 90 | 41 | 0 | 81 | 170 | 261 | 350 | 5.39e-30 | 124 |
MS.gene51233.t1 | AT1G24330 | 26.316 | 266 | 187 | 5 | 191 | 449 | 448 | 711 | 6.71e-19 | 90.1 |
MS.gene51233.t1 | AT1G24330 | 54.444 | 90 | 41 | 0 | 81 | 170 | 261 | 350 | 5.39e-30 | 124 |
MS.gene51233.t1 | AT1G24330 | 26.316 | 266 | 187 | 5 | 191 | 449 | 448 | 711 | 6.71e-19 | 90.1 |
MS.gene51233.t1 | AT3G47820 | 34.351 | 262 | 162 | 5 | 190 | 443 | 228 | 487 | 1.80e-29 | 121 |
MS.gene51233.t1 | AT1G67530 | 61.538 | 78 | 30 | 0 | 93 | 170 | 270 | 347 | 3.69e-29 | 121 |
MS.gene51233.t1 | AT1G67530 | 28.244 | 262 | 178 | 6 | 190 | 443 | 447 | 706 | 1.21e-20 | 95.5 |
MS.gene51233.t1 | AT1G67530 | 61.538 | 78 | 30 | 0 | 93 | 170 | 270 | 347 | 3.69e-29 | 121 |
MS.gene51233.t1 | AT1G67530 | 28.244 | 262 | 178 | 6 | 190 | 443 | 447 | 706 | 1.21e-20 | 95.5 |
MS.gene51233.t1 | AT1G67530 | 61.538 | 78 | 30 | 0 | 93 | 170 | 270 | 347 | 3.69e-29 | 121 |
MS.gene51233.t1 | AT1G67530 | 28.244 | 262 | 178 | 6 | 190 | 443 | 447 | 706 | 1.21e-20 | 95.5 |
MS.gene51233.t1 | AT1G67530 | 61.538 | 78 | 30 | 0 | 93 | 170 | 270 | 347 | 3.83e-29 | 120 |
MS.gene51233.t1 | AT2G35930 | 31.000 | 300 | 179 | 10 | 95 | 366 | 12 | 311 | 2.06e-28 | 116 |
MS.gene51233.t1 | AT4G12710 | 35.036 | 274 | 169 | 6 | 187 | 451 | 65 | 338 | 3.22e-28 | 115 |
MS.gene51233.t1 | AT1G66160 | 26.632 | 383 | 241 | 15 | 95 | 445 | 33 | 407 | 2.70e-27 | 113 |
MS.gene51233.t1 | AT5G37490 | 25.781 | 384 | 246 | 10 | 95 | 442 | 31 | 411 | 3.52e-27 | 113 |
MS.gene51233.t1 | AT2G25130 | 32.841 | 271 | 164 | 8 | 190 | 446 | 132 | 398 | 3.77e-24 | 105 |
MS.gene51233.t1 | AT5G64660 | 27.297 | 381 | 217 | 12 | 95 | 430 | 10 | 375 | 9.44e-24 | 103 |
MS.gene51233.t1 | AT5G09800 | 25.141 | 354 | 229 | 10 | 95 | 420 | 11 | 356 | 2.53e-22 | 99.0 |
MS.gene51233.t1 | AT1G08315 | 30.000 | 280 | 175 | 10 | 183 | 442 | 23 | 301 | 3.16e-22 | 97.4 |
MS.gene51233.t1 | AT3G52450 | 26.859 | 417 | 240 | 17 | 95 | 448 | 7 | 421 | 3.52e-22 | 99.0 |
MS.gene51233.t1 | AT3G18710 | 21.503 | 386 | 265 | 9 | 95 | 443 | 12 | 396 | 2.50e-20 | 93.2 |
MS.gene51233.t1 | AT3G03440 | 28.723 | 282 | 190 | 6 | 177 | 450 | 74 | 352 | 2.67e-19 | 90.1 |
MS.gene51233.t1 | AT1G66160 | 24.543 | 383 | 233 | 16 | 95 | 445 | 33 | 391 | 3.61e-18 | 86.7 |
MS.gene51233.t1 | AT4G36550 | 45.333 | 75 | 41 | 0 | 95 | 169 | 219 | 293 | 2.25e-16 | 82.4 |
MS.gene51233.t1 | AT5G14510 | 30.769 | 273 | 176 | 8 | 183 | 447 | 16 | 283 | 3.02e-16 | 80.1 |
MS.gene51233.t1 | AT3G61390 | 33.333 | 141 | 84 | 5 | 39 | 177 | 226 | 358 | 3.75e-15 | 77.0 |
MS.gene51233.t1 | AT3G61390 | 33.333 | 141 | 84 | 5 | 39 | 177 | 301 | 433 | 4.56e-15 | 77.4 |
MS.gene51233.t1 | AT2G45920 | 49.333 | 75 | 36 | 1 | 87 | 161 | 319 | 391 | 9.10e-15 | 76.3 |
MS.gene51233.t1 | AT3G11840 | 52.778 | 72 | 32 | 2 | 95 | 165 | 10 | 80 | 1.26e-14 | 76.3 |
MS.gene51233.t1 | AT1G01680 | 44.928 | 69 | 38 | 0 | 97 | 165 | 235 | 303 | 1.28e-14 | 74.7 |
MS.gene51233.t1 | AT3G60350 | 32.022 | 178 | 116 | 2 | 198 | 370 | 590 | 767 | 2.79e-14 | 75.9 |
MS.gene51233.t1 | AT3G60350 | 32.022 | 178 | 116 | 2 | 198 | 370 | 590 | 767 | 2.79e-14 | 75.9 |
MS.gene51233.t1 | AT1G01660 | 43.421 | 76 | 41 | 1 | 91 | 166 | 496 | 569 | 4.56e-14 | 74.7 |
MS.gene51233.t1 | AT1G01660 | 43.421 | 76 | 41 | 1 | 91 | 166 | 495 | 568 | 4.80e-14 | 74.7 |
MS.gene51233.t1 | AT2G44900 | 33.728 | 169 | 107 | 2 | 198 | 361 | 599 | 767 | 1.49e-13 | 73.6 |
MS.gene51233.t1 | AT2G44900 | 33.728 | 169 | 107 | 2 | 198 | 361 | 599 | 767 | 1.49e-13 | 73.6 |
MS.gene51233.t1 | AT1G20780 | 27.604 | 192 | 131 | 5 | 95 | 278 | 23 | 214 | 3.21e-13 | 72.4 |
MS.gene51233.t1 | AT1G20780 | 27.604 | 192 | 131 | 5 | 95 | 278 | 23 | 214 | 3.21e-13 | 72.4 |
MS.gene51233.t1 | AT1G20780 | 27.604 | 192 | 131 | 5 | 95 | 278 | 23 | 214 | 3.21e-13 | 72.4 |
MS.gene51233.t1 | AT1G56040 | 46.479 | 71 | 36 | 1 | 88 | 158 | 348 | 416 | 4.88e-13 | 71.2 |
MS.gene51233.t1 | AT5G65500 | 47.761 | 67 | 35 | 0 | 95 | 161 | 715 | 781 | 9.24e-13 | 70.9 |
MS.gene51233.t1 | AT5G65500 | 47.761 | 67 | 35 | 0 | 95 | 161 | 723 | 789 | 9.87e-13 | 70.9 |
MS.gene51233.t1 | AT1G56030 | 46.032 | 63 | 34 | 0 | 96 | 158 | 324 | 386 | 3.93e-12 | 68.2 |
MS.gene51233.t1 | AT2G45910 | 43.836 | 73 | 39 | 1 | 89 | 161 | 759 | 829 | 7.57e-12 | 68.2 |
MS.gene51233.t1 | AT2G45910 | 43.836 | 73 | 39 | 1 | 89 | 161 | 759 | 829 | 7.57e-12 | 68.2 |
MS.gene51233.t1 | AT5G57035 | 38.750 | 80 | 49 | 0 | 96 | 175 | 709 | 788 | 1.44e-11 | 67.4 |
MS.gene51233.t1 | AT1G76390 | 24.092 | 303 | 171 | 8 | 95 | 342 | 25 | 323 | 2.50e-11 | 66.6 |
MS.gene51233.t1 | AT1G76390 | 24.092 | 303 | 171 | 8 | 95 | 342 | 25 | 323 | 2.50e-11 | 66.6 |
MS.gene51233.t1 | AT3G49060 | 41.176 | 85 | 45 | 2 | 77 | 161 | 722 | 801 | 4.33e-11 | 65.9 |
MS.gene51233.t1 | AT3G49060 | 41.176 | 85 | 45 | 2 | 77 | 161 | 712 | 791 | 4.38e-11 | 65.9 |
MS.gene51233.t1 | AT3G49060 | 41.176 | 85 | 45 | 2 | 77 | 161 | 689 | 768 | 4.40e-11 | 65.9 |
MS.gene51233.t1 | AT3G20170 | 25.253 | 198 | 143 | 1 | 200 | 397 | 184 | 376 | 5.64e-11 | 64.7 |
MS.gene51233.t1 | AT5G50900 | 30.061 | 163 | 110 | 3 | 191 | 351 | 169 | 329 | 6.08e-11 | 65.1 |
Find 93 sgRNAs with CRISPR-Local
Find 128 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTATAACCTCAACTAAAAT+AGG | 0.132718 | 1.2:-74306016 | None:intergenic |
CTGCAACTCCCTTGCTTCTT+TGG | 0.167120 | 1.2:-74305327 | None:intergenic |
TGAAGAGTCTGATTGGTTTA+TGG | 0.249287 | 1.2:+74305280 | MS.gene51233:CDS |
TCCTTTGTTACTCTCGTTGA+TGG | 0.253869 | 1.2:-74305600 | None:intergenic |
TGCTGGTGAGCTCCGGTTGC+TGG | 0.264800 | 1.2:+74305451 | MS.gene51233:CDS |
TTCAAAACATCTACAATATC+TGG | 0.273503 | 1.2:-74305647 | None:intergenic |
CTTCAGGGATTATCAGAAAA+TGG | 0.310426 | 1.2:+74306148 | MS.gene51233:CDS |
AGCAAATTCTGTTTGAGCTT+TGG | 0.316577 | 1.2:-74304706 | None:intergenic |
CCTTTGCTAGTTTCAATTGC+AGG | 0.330384 | 1.2:-74306105 | None:intergenic |
TGGAGCAGAAGAAGCACTTC+AGG | 0.351787 | 1.2:+74306132 | MS.gene51233:CDS |
CGAAAATCATCTGGGATTAC+AGG | 0.356127 | 1.2:-74305010 | None:intergenic |
AGACTCTTCAAAACGTAGTT+AGG | 0.375832 | 1.2:-74305267 | None:intergenic |
TTCATCAGTTCGAGAGATAT+AGG | 0.393884 | 1.2:-74305037 | None:intergenic |
TGACCGGTTGAGACGATTAC+AGG | 0.398865 | 1.2:-74305064 | None:intergenic |
TGAAACATTCTCGTTCTCAT+AGG | 0.402456 | 1.2:-74304972 | None:intergenic |
GCTATAATGACAATCCTTGC+AGG | 0.409994 | 1.2:+74305950 | MS.gene51233:CDS |
CATTTCTCTTGGCCAGCAAC+CGG | 0.412479 | 1.2:-74305463 | None:intergenic |
CTCACGGTTGCGTGGTGATC+CGG | 0.413042 | 1.2:-74306041 | None:intergenic |
GTCCACTGAATTACACGAAT+TGG | 0.417527 | 1.2:+74304848 | MS.gene51233:CDS |
CAAAGTAACTTTATAAGAGC+CGG | 0.431128 | 1.2:-74305770 | None:intergenic |
TCCTTTGATACGATTTATGA+AGG | 0.431714 | 1.2:+74305895 | MS.gene51233:CDS |
GATAGAGCTAAGAGAAAAGC+TGG | 0.432820 | 1.2:+74306175 | MS.gene51233:CDS |
TTTAATCTATGTATTTATCA+AGG | 0.434426 | 1.2:+74305836 | MS.gene51233:CDS |
GATGAGAACAAAGTTGCAAT+AGG | 0.435327 | 1.2:+74305731 | MS.gene51233:CDS |
AGTTGCAGAACAAAGAAATC+TGG | 0.441575 | 1.2:+74305342 | MS.gene51233:CDS |
TCGGTTATCTGCATTTCTCT+TGG | 0.444128 | 1.2:-74305474 | None:intergenic |
ATAGGACACCGAAAATCATC+TGG | 0.444428 | 1.2:-74305019 | None:intergenic |
TTCTCATAGGTATCAACCTC+AGG | 0.450223 | 1.2:-74304959 | None:intergenic |
TGCTGATTTACAACTAGACT+TGG | 0.455398 | 1.2:+74304725 | MS.gene51233:CDS |
TTAGTTGAGGTTATACGAAC+CGG | 0.456126 | 1.2:+74306022 | MS.gene51233:CDS |
TTGCTGTCCTTCCTTCATGA+TGG | 0.458588 | 1.2:-74305973 | None:intergenic |
GTATAACCTCAACTAAAATA+GGG | 0.461180 | 1.2:-74306015 | None:intergenic |
TTCCTTCATGATGGCCTGCA+AGG | 0.462779 | 1.2:-74305964 | None:intergenic |
TCAAAACGTAGTTAGGAGTA+AGG | 0.468306 | 1.2:-74305260 | None:intergenic |
ACCGCATGCTCCTGAGTTCG+AGG | 0.468410 | 1.2:-74305557 | None:intergenic |
TTAGATCATTCATAGTCCTC+AGG | 0.469633 | 1.2:-74304818 | None:intergenic |
ACCTCAACTAAAATAGGGAT+TGG | 0.470796 | 1.2:-74306010 | None:intergenic |
TTCCACAGATCCTCGAACTC+AGG | 0.479457 | 1.2:+74305547 | MS.gene51233:CDS |
GAAGGATGCGGGCGGTGGGA+TGG | 0.485190 | 1.2:+74305913 | MS.gene51233:CDS |
CATGAAGGAAGGACAGCAAT+TGG | 0.491237 | 1.2:+74305977 | MS.gene51233:CDS |
GGGCGGCTGCTGGTGAGCTC+CGG | 0.491475 | 1.2:+74305444 | MS.gene51233:CDS |
AAAGTTGCAATAGGTGCAGC+AGG | 0.503040 | 1.2:+74305740 | MS.gene51233:CDS |
TTTATGAAGGATGCGGGCGG+TGG | 0.504174 | 1.2:+74305908 | MS.gene51233:CDS |
AAGCGGTATTGCTCCTGCTT+CGG | 0.508786 | 1.2:-74305507 | None:intergenic |
CGAGTATGTATTGCCGAAGC+AGG | 0.513878 | 1.2:+74305494 | MS.gene51233:CDS |
GATACGATTTATGAAGGATG+CGG | 0.516210 | 1.2:+74305901 | MS.gene51233:CDS |
GATCCTGTAATCGTCTCAAC+CGG | 0.519344 | 1.2:+74305061 | MS.gene51233:CDS |
TGTAATCGTCTCAACCGGTC+AGG | 0.519349 | 1.2:+74305066 | MS.gene51233:CDS |
AAAGCTAGAGCTGTTAAAGC+CGG | 0.526299 | 1.2:+74305863 | MS.gene51233:CDS |
GAACAGCAAAGGGCGGCTGC+TGG | 0.530588 | 1.2:+74305434 | MS.gene51233:intron |
CTTATAAAGTTACTTTGTGA+AGG | 0.532116 | 1.2:+74305776 | MS.gene51233:CDS |
AGGAAGGACAGCAATTGGTC+AGG | 0.536014 | 1.2:+74305982 | MS.gene51233:CDS |
AGGTGCAGCAGGAGCCATCC+CGG | 0.539324 | 1.2:+74305751 | MS.gene51233:CDS |
GAACTGTTGCAGCGAATCGA+AGG | 0.545611 | 1.2:+74306208 | MS.gene51233:CDS |
ATACGATTTATGAAGGATGC+GGG | 0.548943 | 1.2:+74305902 | MS.gene51233:CDS |
AAAGTAACTTTATAAGAGCC+GGG | 0.549044 | 1.2:-74305769 | None:intergenic |
CTCCTGAGTTCGAGGATCTG+TGG | 0.551751 | 1.2:-74305549 | None:intergenic |
CTGCTTCGGCAATACATACT+CGG | 0.554371 | 1.2:-74305493 | None:intergenic |
GGAGCAGAAGAAGCACTTCA+GGG | 0.556560 | 1.2:+74306133 | MS.gene51233:CDS |
AAGCTAGAGCTGTTAAAGCC+GGG | 0.558896 | 1.2:+74305864 | MS.gene51233:CDS |
CAAAACGTAGTTAGGAGTAA+GGG | 0.565631 | 1.2:-74305259 | None:intergenic |
TTATGAAGGATGCGGGCGGT+GGG | 0.567221 | 1.2:+74305909 | MS.gene51233:CDS |
AACTGTTGCAGCGAATCGAA+GGG | 0.569767 | 1.2:+74306209 | MS.gene51233:CDS |
GACCAATTCGTGTAATTCAG+TGG | 0.570216 | 1.2:-74304850 | None:intergenic |
ATCCTTGCAGGCCATCATGA+AGG | 0.571335 | 1.2:+74305962 | MS.gene51233:CDS |
TCCTTCATAAATCGTATCAA+AGG | 0.578982 | 1.2:-74305896 | None:intergenic |
TATCAAAGGAGCAACTATCC+CGG | 0.586650 | 1.2:-74305882 | None:intergenic |
TTGAAACTAGCAAAGGAACA+TGG | 0.590002 | 1.2:+74306112 | MS.gene51233:CDS |
AACTAAAATAGGGATTGGCT+CGG | 0.594552 | 1.2:-74306005 | None:intergenic |
TCTCAGAGAAGTTGCACCTG+AGG | 0.594729 | 1.2:+74304802 | MS.gene51233:CDS |
GACAACAAGTCTACGAGAAG+CGG | 0.596931 | 1.2:-74305524 | None:intergenic |
TAACTTTATAAGAGCCGGGA+TGG | 0.597754 | 1.2:-74305765 | None:intergenic |
AGAATGTTTCAATTAAGCAC+CGG | 0.604626 | 1.2:+74304984 | MS.gene51233:CDS |
GCAGCATTCTCACGGTTGCG+TGG | 0.609043 | 1.2:-74306049 | None:intergenic |
GTTGAACTACCAAAGAAGCA+AGG | 0.609236 | 1.2:+74305318 | MS.gene51233:CDS |
CATCTGGGATTACAGGAGAC+CGG | 0.612294 | 1.2:-74305003 | None:intergenic |
TCCTCGAACTCAGGAGCATG+CGG | 0.612420 | 1.2:+74305556 | MS.gene51233:CDS |
TTGCAGGCCATCATGAAGGA+AGG | 0.615941 | 1.2:+74305966 | MS.gene51233:CDS |
GGTTTATGGTGTGATAGCAA+TGG | 0.620008 | 1.2:+74305294 | MS.gene51233:CDS |
GATTGGGGATAATACCTGAC+CGG | 0.621034 | 1.2:-74305080 | None:intergenic |
TTGAACTACCAAAGAAGCAA+GGG | 0.622309 | 1.2:+74305319 | MS.gene51233:CDS |
CCTGCAATTGAAACTAGCAA+AGG | 0.625998 | 1.2:+74306105 | MS.gene51233:CDS |
TCCATCAACGAGAGTAACAA+AGG | 0.627518 | 1.2:+74305599 | MS.gene51233:CDS |
AAACAGCAGCAGCATTCTCA+CGG | 0.633676 | 1.2:-74306057 | None:intergenic |
TAGGACACCGAAAATCATCT+GGG | 0.636004 | 1.2:-74305018 | None:intergenic |
CTTTGTGAAGGTACTCCAAG+AGG | 0.641917 | 1.2:+74305788 | MS.gene51233:CDS |
CATGGAGGCGAGAGAAAACG+CGG | 0.648697 | 1.2:+74305679 | MS.gene51233:CDS |
GTTGCAGCGAATCGAAGGGG+AGG | 0.677232 | 1.2:+74306213 | MS.gene51233:CDS |
TGATATTGAACAGCAAAGGG+CGG | 0.681387 | 1.2:+74305427 | MS.gene51233:intron |
AAAGGAACTATAGTAAACGC+AGG | 0.682325 | 1.2:+74305617 | MS.gene51233:CDS |
CGTGCTCGCAGAAAATCCTG+AGG | 0.685860 | 1.2:+74304943 | MS.gene51233:CDS |
ACTGTTGCAGCGAATCGAAG+GGG | 0.696214 | 1.2:+74306210 | MS.gene51233:CDS |
CGATTTATGAAGGATGCGGG+CGG | 0.720329 | 1.2:+74305905 | MS.gene51233:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTAATCTATGTATTTATCA+AGG | + | chr1.2:74305836-74305855 | MS.gene51233:CDS | 15.0% |
!!! | ATTGTAGATGTTTTGAAAAA+CGG | + | chr1.2:74305653-74305672 | MS.gene51233:CDS | 20.0% |
! | GTATAACCTCAACTAAAATA+GGG | - | chr1.2:74306018-74306037 | None:intergenic | 25.0% |
! | TAATGATATTGAACAGCAAA+GGG | + | chr1.2:74305424-74305443 | MS.gene51233:intron | 25.0% |
! | TTCAAAACATCTACAATATC+TGG | - | chr1.2:74305650-74305669 | None:intergenic | 25.0% |
! | TTTCATATGTCTGCAAAATA+AGG | - | chr1.2:74305164-74305183 | None:intergenic | 25.0% |
!! | CTTATAAAGTTACTTTGTGA+AGG | + | chr1.2:74305776-74305795 | MS.gene51233:CDS | 25.0% |
AAAGATCCTGCATTCAAAAA+TGG | + | chr1.2:74305181-74305200 | MS.gene51233:CDS | 30.0% | |
AAAGTAACTTTATAAGAGCC+GGG | - | chr1.2:74305772-74305791 | None:intergenic | 30.0% | |
AGAATGTTTCAATTAAGCAC+CGG | + | chr1.2:74304984-74305003 | MS.gene51233:CDS | 30.0% | |
ATATGTCTGCAAAATAAGGT+AGG | - | chr1.2:74305160-74305179 | None:intergenic | 30.0% | |
CAAAGTAACTTTATAAGAGC+CGG | - | chr1.2:74305773-74305792 | None:intergenic | 30.0% | |
CGTATAACCTCAACTAAAAT+AGG | - | chr1.2:74306019-74306038 | None:intergenic | 30.0% | |
GTAATGATATTGAACAGCAA+AGG | + | chr1.2:74305423-74305442 | MS.gene51233:intron | 30.0% | |
TCCTTCATAAATCGTATCAA+AGG | - | chr1.2:74305899-74305918 | None:intergenic | 30.0% | |
TCCTTTGATACGATTTATGA+AGG | + | chr1.2:74305895-74305914 | MS.gene51233:CDS | 30.0% | |
! | AACTGCTATCAAAGCTTTAT+TGG | + | chr1.2:74305388-74305407 | MS.gene51233:intron | 30.0% |
! | AGTCTTTCAGTTTCTAAGAA+GGG | - | chr1.2:74304922-74304941 | None:intergenic | 30.0% |
AAAGGAACTATAGTAAACGC+AGG | + | chr1.2:74305617-74305636 | MS.gene51233:CDS | 35.0% | |
ACCTCAACTAAAATAGGGAT+TGG | - | chr1.2:74306013-74306032 | None:intergenic | 35.0% | |
AGACTCTTCAAAACGTAGTT+AGG | - | chr1.2:74305270-74305289 | None:intergenic | 35.0% | |
AGCAAATTCTGTTTGAGCTT+TGG | - | chr1.2:74304709-74304728 | None:intergenic | 35.0% | |
AGTTGCAGAACAAAGAAATC+TGG | + | chr1.2:74305342-74305361 | MS.gene51233:CDS | 35.0% | |
ATACGATTTATGAAGGATGC+GGG | + | chr1.2:74305902-74305921 | MS.gene51233:CDS | 35.0% | |
ATGTTTCGCACAAAAAGGAT+TGG | - | chr1.2:74305100-74305119 | None:intergenic | 35.0% | |
ATTCAAAAATGGCTTGATGC+TGG | + | chr1.2:74305192-74305211 | MS.gene51233:CDS | 35.0% | |
CAAAACGTAGTTAGGAGTAA+GGG | - | chr1.2:74305262-74305281 | None:intergenic | 35.0% | |
CTTCAGGGATTATCAGAAAA+TGG | + | chr1.2:74306148-74306167 | MS.gene51233:CDS | 35.0% | |
GAACAATGTTTCGCACAAAA+AGG | - | chr1.2:74305105-74305124 | None:intergenic | 35.0% | |
GAATTGGTCATAACAAGCAA+CGG | + | chr1.2:74304864-74304883 | MS.gene51233:intron | 35.0% | |
GATACGATTTATGAAGGATG+CGG | + | chr1.2:74305901-74305920 | MS.gene51233:CDS | 35.0% | |
GATGAGAACAAAGTTGCAAT+AGG | + | chr1.2:74305731-74305750 | MS.gene51233:CDS | 35.0% | |
TCAAAACGTAGTTAGGAGTA+AGG | - | chr1.2:74305263-74305282 | None:intergenic | 35.0% | |
TGAAACATTCTCGTTCTCAT+AGG | - | chr1.2:74304975-74304994 | None:intergenic | 35.0% | |
TGTTTCGCACAAAAAGGATT+GGG | - | chr1.2:74305099-74305118 | None:intergenic | 35.0% | |
TTAGATCATTCATAGTCCTC+AGG | - | chr1.2:74304821-74304840 | None:intergenic | 35.0% | |
TTAGTTGAGGTTATACGAAC+CGG | + | chr1.2:74306022-74306041 | MS.gene51233:CDS | 35.0% | |
TTCATCAGTTCGAGAGATAT+AGG | - | chr1.2:74305040-74305059 | None:intergenic | 35.0% | |
TTGAAACTAGCAAAGGAACA+TGG | + | chr1.2:74306112-74306131 | MS.gene51233:CDS | 35.0% | |
TTGAACTACCAAAGAAGCAA+GGG | + | chr1.2:74305319-74305338 | MS.gene51233:CDS | 35.0% | |
! | CAGTCTTTCAGTTTCTAAGA+AGG | - | chr1.2:74304923-74304942 | None:intergenic | 35.0% |
! | CTGTAATCCCAGATGATTTT+CGG | + | chr1.2:74305011-74305030 | MS.gene51233:CDS | 35.0% |
!! | AAAGTGTCTGCTGTGTTTTA+GGG | - | chr1.2:74305230-74305249 | None:intergenic | 35.0% |
!! | AACTAAAATAGGGATTGGCT+CGG | - | chr1.2:74306008-74306027 | None:intergenic | 35.0% |
!! | TGAAGAGTCTGATTGGTTTA+TGG | + | chr1.2:74305280-74305299 | MS.gene51233:CDS | 35.0% |
!! | TGCTGATTTACAACTAGACT+TGG | + | chr1.2:74304725-74304744 | MS.gene51233:CDS | 35.0% |
!! | TTTTGAGTATAGCAGGATCA+GGG | - | chr1.2:74304779-74304798 | None:intergenic | 35.0% |
!!! | AAAAGTGTCTGCTGTGTTTT+AGG | - | chr1.2:74305231-74305250 | None:intergenic | 35.0% |
!!! | ATCAAGCCATTTTTGAATGC+AGG | - | chr1.2:74305190-74305209 | None:intergenic | 35.0% |
!!! | TACGTTTTGAAGAGTCTGAT+TGG | + | chr1.2:74305273-74305292 | MS.gene51233:CDS | 35.0% |
!!! | TGTTTTGAAAAACGGAAGCA+TGG | + | chr1.2:74305661-74305680 | MS.gene51233:CDS | 35.0% |
AAAGCTAGAGCTGTTAAAGC+CGG | + | chr1.2:74305863-74305882 | MS.gene51233:CDS | 40.0% | |
ATAACAAGCAACGGAGAACT+AGG | + | chr1.2:74304873-74304892 | MS.gene51233:intron | 40.0% | |
ATAGGACACCGAAAATCATC+TGG | - | chr1.2:74305022-74305041 | None:intergenic | 40.0% | |
CCTGCAATTGAAACTAGCAA+AGG | + | chr1.2:74306105-74306124 | MS.gene51233:CDS | 40.0% | |
GACCAATTCGTGTAATTCAG+TGG | - | chr1.2:74304853-74304872 | None:intergenic | 40.0% | |
GATAGAGCTAAGAGAAAAGC+TGG | + | chr1.2:74306175-74306194 | MS.gene51233:CDS | 40.0% | |
GCTATAATGACAATCCTTGC+AGG | + | chr1.2:74305950-74305969 | MS.gene51233:CDS | 40.0% | |
GGTTTATGGTGTGATAGCAA+TGG | + | chr1.2:74305294-74305313 | MS.gene51233:CDS | 40.0% | |
GTCCACTGAATTACACGAAT+TGG | + | chr1.2:74304848-74304867 | MS.gene51233:CDS | 40.0% | |
GTTGAACTACCAAAGAAGCA+AGG | + | chr1.2:74305318-74305337 | MS.gene51233:CDS | 40.0% | |
GTTTCGCACAAAAAGGATTG+GGG | - | chr1.2:74305098-74305117 | None:intergenic | 40.0% | |
TAACTTTATAAGAGCCGGGA+TGG | - | chr1.2:74305768-74305787 | None:intergenic | 40.0% | |
TAGGACACCGAAAATCATCT+GGG | - | chr1.2:74305021-74305040 | None:intergenic | 40.0% | |
TATCAAAGGAGCAACTATCC+CGG | - | chr1.2:74305885-74305904 | None:intergenic | 40.0% | |
TCCATCAACGAGAGTAACAA+AGG | + | chr1.2:74305599-74305618 | MS.gene51233:CDS | 40.0% | |
TCCTTTGTTACTCTCGTTGA+TGG | - | chr1.2:74305603-74305622 | None:intergenic | 40.0% | |
TCGGTTATCTGCATTTCTCT+TGG | - | chr1.2:74305477-74305496 | None:intergenic | 40.0% | |
TGATATTGAACAGCAAAGGG+CGG | + | chr1.2:74305427-74305446 | MS.gene51233:intron | 40.0% | |
TGTGCGAAACATTGTTCTGA+TGG | + | chr1.2:74305108-74305127 | MS.gene51233:intron | 40.0% | |
TTCTCATAGGTATCAACCTC+AGG | - | chr1.2:74304962-74304981 | None:intergenic | 40.0% | |
! | CCTTTGCTAGTTTCAATTGC+AGG | - | chr1.2:74306108-74306127 | None:intergenic | 40.0% |
! | CGAAAATCATCTGGGATTAC+AGG | - | chr1.2:74305013-74305032 | None:intergenic | 40.0% |
! | GTTTCTAAGAAGGGATGAGA+CGG | - | chr1.2:74304913-74304932 | None:intergenic | 40.0% |
! | TTTGAAAAACGGAAGCATGG+AGG | + | chr1.2:74305664-74305683 | MS.gene51233:CDS | 40.0% |
!! | CTTTTGAGTATAGCAGGATC+AGG | - | chr1.2:74304780-74304799 | None:intergenic | 40.0% |
!! | GAGAGTCTTTTGAGTATAGC+AGG | - | chr1.2:74304786-74304805 | None:intergenic | 40.0% |
!! | TGTTTTGTGGTTGGTATGCA+CGG | + | chr1.2:74306075-74306094 | MS.gene51233:CDS | 40.0% |
!!! | GCCAATCCCTATTTTAGTTG+AGG | + | chr1.2:74306009-74306028 | MS.gene51233:CDS | 40.0% |
AAACAGCAGCAGCATTCTCA+CGG | - | chr1.2:74306060-74306079 | None:intergenic | 45.0% | |
AAAGTTGCAATAGGTGCAGC+AGG | + | chr1.2:74305740-74305759 | MS.gene51233:CDS | 45.0% | |
AACTGTTGCAGCGAATCGAA+GGG | + | chr1.2:74306209-74306228 | MS.gene51233:CDS | 45.0% | |
AAGCTAGAGCTGTTAAAGCC+GGG | + | chr1.2:74305864-74305883 | MS.gene51233:CDS | 45.0% | |
CATGAAGGAAGGACAGCAAT+TGG | + | chr1.2:74305977-74305996 | MS.gene51233:CDS | 45.0% | |
CTGCTTCGGCAATACATACT+CGG | - | chr1.2:74305496-74305515 | None:intergenic | 45.0% | |
GACAACAAGTCTACGAGAAG+CGG | - | chr1.2:74305527-74305546 | None:intergenic | 45.0% | |
GATCCTGTAATCGTCTCAAC+CGG | + | chr1.2:74305061-74305080 | MS.gene51233:CDS | 45.0% | |
GATTGGGGATAATACCTGAC+CGG | - | chr1.2:74305083-74305102 | None:intergenic | 45.0% | |
TTGCTGTCCTTCCTTCATGA+TGG | - | chr1.2:74305976-74305995 | None:intergenic | 45.0% | |
!! | CTTTGTGAAGGTACTCCAAG+AGG | + | chr1.2:74305788-74305807 | MS.gene51233:CDS | 45.0% |
!! | GTTTTGTGGTTGGTATGCAC+GGG | + | chr1.2:74306076-74306095 | MS.gene51233:CDS | 45.0% |
!!! | AGAATGCTGCTGCTGTTTTG+TGG | + | chr1.2:74306062-74306081 | MS.gene51233:CDS | 45.0% |
!!! | GCTGCATCTTTTTTGCCTCT+TGG | - | chr1.2:74305806-74305825 | None:intergenic | 45.0% |
AAGCGGTATTGCTCCTGCTT+CGG | - | chr1.2:74305510-74305529 | None:intergenic | 50.0% | |
ACTGTTGCAGCGAATCGAAG+GGG | + | chr1.2:74306210-74306229 | MS.gene51233:CDS | 50.0% | |
AGGAAGGACAGCAATTGGTC+AGG | + | chr1.2:74305982-74306001 | MS.gene51233:CDS | 50.0% | |
ATCCTTGCAGGCCATCATGA+AGG | + | chr1.2:74305962-74305981 | MS.gene51233:CDS | 50.0% | |
CATTTCTCTTGGCCAGCAAC+CGG | - | chr1.2:74305466-74305485 | None:intergenic | 50.0% | |
CGAGTATGTATTGCCGAAGC+AGG | + | chr1.2:74305494-74305513 | MS.gene51233:CDS | 50.0% | |
CGATTTATGAAGGATGCGGG+CGG | + | chr1.2:74305905-74305924 | MS.gene51233:CDS | 50.0% | |
CTGCAACTCCCTTGCTTCTT+TGG | - | chr1.2:74305330-74305349 | None:intergenic | 50.0% | |
GAACTGTTGCAGCGAATCGA+AGG | + | chr1.2:74306208-74306227 | MS.gene51233:CDS | 50.0% | |
TCTCAGAGAAGTTGCACCTG+AGG | + | chr1.2:74304802-74304821 | MS.gene51233:CDS | 50.0% | |
TGACCGGTTGAGACGATTAC+AGG | - | chr1.2:74305067-74305086 | None:intergenic | 50.0% | |
TGTAATCGTCTCAACCGGTC+AGG | + | chr1.2:74305066-74305085 | MS.gene51233:CDS | 50.0% | |
TTCCACAGATCCTCGAACTC+AGG | + | chr1.2:74305547-74305566 | MS.gene51233:CDS | 50.0% | |
TTCCTTCATGATGGCCTGCA+AGG | - | chr1.2:74305967-74305986 | None:intergenic | 50.0% | |
TTGCAGGCCATCATGAAGGA+AGG | + | chr1.2:74305966-74305985 | MS.gene51233:CDS | 50.0% | |
! | CATCTGGGATTACAGGAGAC+CGG | - | chr1.2:74305006-74305025 | None:intergenic | 50.0% |
!! | GGAGCAGAAGAAGCACTTCA+GGG | + | chr1.2:74306133-74306152 | MS.gene51233:CDS | 50.0% |
!! | TGGAGCAGAAGAAGCACTTC+AGG | + | chr1.2:74306132-74306151 | MS.gene51233:CDS | 50.0% |
!!! | TGCTGCTGCTGTTTTGTGGT+TGG | + | chr1.2:74306066-74306085 | MS.gene51233:CDS | 50.0% |
!!! | TGTCTGCTGTGTTTTAGGGC+AGG | - | chr1.2:74305226-74305245 | None:intergenic | 50.0% |
CATGGAGGCGAGAGAAAACG+CGG | + | chr1.2:74305679-74305698 | MS.gene51233:CDS | 55.0% | |
CGTGCTCGCAGAAAATCCTG+AGG | + | chr1.2:74304943-74304962 | MS.gene51233:CDS | 55.0% | |
CTCCTGAGTTCGAGGATCTG+TGG | - | chr1.2:74305552-74305571 | None:intergenic | 55.0% | |
TTATGAAGGATGCGGGCGGT+GGG | + | chr1.2:74305909-74305928 | MS.gene51233:CDS | 55.0% | |
TTTATGAAGGATGCGGGCGG+TGG | + | chr1.2:74305908-74305927 | MS.gene51233:CDS | 55.0% | |
! | TCCTCGAACTCAGGAGCATG+CGG | + | chr1.2:74305556-74305575 | MS.gene51233:CDS | 55.0% |
ACCGCATGCTCCTGAGTTCG+AGG | - | chr1.2:74305560-74305579 | None:intergenic | 60.0% | |
CTCACGGTTGCGTGGTGATC+CGG | - | chr1.2:74306044-74306063 | None:intergenic | 60.0% | |
GCAGCATTCTCACGGTTGCG+TGG | - | chr1.2:74306052-74306071 | None:intergenic | 60.0% | |
GTTGCAGCGAATCGAAGGGG+AGG | + | chr1.2:74306213-74306232 | MS.gene51233:CDS | 60.0% | |
AGGTGCAGCAGGAGCCATCC+CGG | + | chr1.2:74305751-74305770 | MS.gene51233:CDS | 65.0% | |
GAACAGCAAAGGGCGGCTGC+TGG | + | chr1.2:74305434-74305453 | MS.gene51233:intron | 65.0% | |
TGCTGGTGAGCTCCGGTTGC+TGG | + | chr1.2:74305451-74305470 | MS.gene51233:CDS | 65.0% | |
GAAGGATGCGGGCGGTGGGA+TGG | + | chr1.2:74305913-74305932 | MS.gene51233:CDS | 70.0% | |
GGGCGGCTGCTGGTGAGCTC+CGG | + | chr1.2:74305444-74305463 | MS.gene51233:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 74304675 | 74306255 | 74304675 | ID=MS.gene51233 |
chr1.2 | mRNA | 74304675 | 74306255 | 74304675 | ID=MS.gene51233.t1;Parent=MS.gene51233 |
chr1.2 | exon | 74304675 | 74304869 | 74304675 | ID=MS.gene51233.t1.exon1;Parent=MS.gene51233.t1 |
chr1.2 | CDS | 74304675 | 74304869 | 74304675 | ID=cds.MS.gene51233.t1;Parent=MS.gene51233.t1 |
chr1.2 | exon | 74304929 | 74305087 | 74304929 | ID=MS.gene51233.t1.exon2;Parent=MS.gene51233.t1 |
chr1.2 | CDS | 74304929 | 74305087 | 74304929 | ID=cds.MS.gene51233.t1;Parent=MS.gene51233.t1 |
chr1.2 | exon | 74305174 | 74305368 | 74305174 | ID=MS.gene51233.t1.exon3;Parent=MS.gene51233.t1 |
chr1.2 | CDS | 74305174 | 74305368 | 74305174 | ID=cds.MS.gene51233.t1;Parent=MS.gene51233.t1 |
chr1.2 | exon | 74305440 | 74306255 | 74305440 | ID=MS.gene51233.t1.exon4;Parent=MS.gene51233.t1 |
chr1.2 | CDS | 74305440 | 74306255 | 74305440 | ID=cds.MS.gene51233.t1;Parent=MS.gene51233.t1 |
Gene Sequence |
Protein sequence |