Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024264.t1 | XP_003624478.1 | 98.6 | 369 | 5 | 0 | 2 | 370 | 5 | 373 | 2.60E-207 | 731.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024264.t1 | Q9FMU6 | 79.2 | 365 | 66 | 3 | 8 | 363 | 3 | 366 | 7.9e-165 | 581.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024264.t1 | Q2HUK6 | 98.6 | 369 | 5 | 0 | 2 | 370 | 5 | 373 | 1.9e-207 | 731.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene024264 | MS.gene64914 | PPI |
| MS.gene024264 | MS.gene86518 | PPI |
| MS.gene72685 | MS.gene024264 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024264.t1 | MTR_7g083790 | 98.391 | 373 | 3 | 1 | 1 | 370 | 1 | 373 | 0.0 | 740 |
| MS.gene024264.t1 | MTR_8g099910 | 77.374 | 358 | 76 | 2 | 6 | 363 | 5 | 357 | 0.0 | 562 |
| MS.gene024264.t1 | MTR_6g033280 | 71.347 | 349 | 90 | 2 | 11 | 358 | 3 | 342 | 0.0 | 516 |
| MS.gene024264.t1 | MTR_4g094578 | 43.253 | 289 | 162 | 1 | 74 | 360 | 24 | 312 | 1.42e-87 | 267 |
| MS.gene024264.t1 | MTR_5g024770 | 46.643 | 283 | 129 | 1 | 71 | 353 | 13 | 273 | 1.82e-86 | 264 |
| MS.gene024264.t1 | MTR_6g034515 | 29.008 | 262 | 150 | 9 | 89 | 331 | 77 | 321 | 3.94e-16 | 79.3 |
| MS.gene024264.t1 | MTR_3g107510 | 26.786 | 224 | 155 | 5 | 44 | 264 | 86 | 303 | 7.40e-16 | 78.6 |
| MS.gene024264.t1 | MTR_2g436930 | 24.686 | 239 | 155 | 4 | 79 | 295 | 15 | 250 | 2.14e-13 | 70.9 |
| MS.gene024264.t1 | MTR_2g436930 | 26.263 | 198 | 119 | 7 | 75 | 249 | 125 | 318 | 5.78e-11 | 63.5 |
| MS.gene024264.t1 | MTR_8g027975 | 27.863 | 262 | 166 | 9 | 73 | 315 | 43 | 300 | 4.08e-13 | 70.1 |
| MS.gene024264.t1 | MTR_8g027975 | 24.737 | 190 | 119 | 5 | 86 | 251 | 160 | 349 | 4.80e-12 | 67.0 |
| MS.gene024264.t1 | MTR_8g076760 | 25.714 | 210 | 121 | 7 | 68 | 253 | 105 | 303 | 4.17e-13 | 69.7 |
| MS.gene024264.t1 | MTR_1g012030 | 27.322 | 183 | 129 | 3 | 82 | 264 | 142 | 320 | 4.44e-13 | 70.5 |
| MS.gene024264.t1 | MTR_5g009500 | 25.789 | 190 | 119 | 5 | 86 | 253 | 147 | 336 | 4.71e-13 | 70.1 |
| MS.gene024264.t1 | MTR_5g009500 | 27.984 | 243 | 149 | 9 | 71 | 295 | 28 | 262 | 3.90e-12 | 67.0 |
| MS.gene024264.t1 | MTR_4g119770 | 23.750 | 240 | 158 | 4 | 79 | 295 | 14 | 251 | 5.45e-13 | 68.9 |
| MS.gene024264.t1 | MTR_7g084400 | 30.493 | 223 | 142 | 6 | 75 | 293 | 210 | 423 | 7.81e-13 | 70.1 |
| MS.gene024264.t1 | MTR_4g119770 | 23.750 | 240 | 158 | 4 | 79 | 295 | 14 | 251 | 9.59e-13 | 68.9 |
| MS.gene024264.t1 | MTR_4g119770 | 24.390 | 205 | 126 | 7 | 75 | 255 | 126 | 325 | 5.04e-11 | 63.5 |
| MS.gene024264.t1 | MTR_8g096050 | 30.734 | 218 | 136 | 7 | 80 | 293 | 229 | 435 | 1.84e-12 | 68.9 |
| MS.gene024264.t1 | MTR_7g084400 | 30.729 | 192 | 126 | 4 | 75 | 262 | 204 | 392 | 3.36e-12 | 67.8 |
| MS.gene024264.t1 | MTR_3g098460 | 30.000 | 220 | 135 | 8 | 80 | 293 | 207 | 413 | 3.61e-12 | 67.8 |
| MS.gene024264.t1 | MTR_7g109135 | 30.000 | 190 | 114 | 7 | 89 | 264 | 34 | 218 | 3.61e-12 | 65.9 |
| MS.gene024264.t1 | MTR_7g109135 | 28.421 | 190 | 117 | 6 | 89 | 264 | 133 | 317 | 4.22e-12 | 67.0 |
| MS.gene024264.t1 | MTR_7g109135 | 28.421 | 190 | 117 | 6 | 89 | 264 | 55 | 239 | 5.89e-12 | 65.5 |
| MS.gene024264.t1 | MTR_4g114320 | 25.824 | 182 | 124 | 4 | 82 | 259 | 126 | 300 | 2.07e-11 | 65.1 |
| MS.gene024264.t1 | MTR_2g436930 | 26.263 | 198 | 119 | 7 | 75 | 249 | 35 | 228 | 3.17e-11 | 63.2 |
| MS.gene024264.t1 | MTR_1g087840 | 27.746 | 173 | 105 | 6 | 93 | 251 | 33 | 199 | 8.63e-11 | 62.8 |
| MS.gene024264.t1 | MTR_5g073040 | 25.874 | 286 | 184 | 7 | 80 | 350 | 41 | 313 | 8.71e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024264.t1 | AT5G14040 | 78.630 | 365 | 70 | 2 | 7 | 363 | 2 | 366 | 0.0 | 573 |
| MS.gene024264.t1 | AT3G48850 | 68.539 | 356 | 109 | 1 | 7 | 362 | 2 | 354 | 0.0 | 509 |
| MS.gene024264.t1 | AT2G17270 | 50.993 | 302 | 143 | 3 | 68 | 368 | 11 | 308 | 3.04e-107 | 317 |
| MS.gene024264.t1 | AT5G51050 | 29.474 | 285 | 168 | 12 | 80 | 348 | 225 | 492 | 5.90e-14 | 73.6 |
| MS.gene024264.t1 | AT5G66380 | 26.636 | 214 | 122 | 8 | 68 | 258 | 102 | 303 | 5.93e-14 | 72.4 |
| MS.gene024264.t1 | AT1G25380 | 27.895 | 190 | 121 | 6 | 89 | 266 | 131 | 316 | 2.78e-13 | 70.9 |
| MS.gene024264.t1 | AT1G25380 | 27.895 | 190 | 121 | 6 | 89 | 266 | 131 | 316 | 2.78e-13 | 70.9 |
| MS.gene024264.t1 | AT3G53940 | 28.729 | 181 | 114 | 6 | 80 | 251 | 182 | 356 | 8.15e-13 | 69.3 |
| MS.gene024264.t1 | AT4G01100 | 25.794 | 252 | 157 | 8 | 71 | 295 | 32 | 280 | 1.38e-12 | 68.6 |
| MS.gene024264.t1 | AT1G79900 | 25.253 | 198 | 144 | 3 | 67 | 264 | 98 | 291 | 1.40e-12 | 68.2 |
| MS.gene024264.t1 | AT4G01100 | 26.778 | 239 | 157 | 8 | 71 | 295 | 32 | 266 | 1.97e-12 | 68.2 |
| MS.gene024264.t1 | AT5G48970 | 25.373 | 201 | 120 | 6 | 75 | 249 | 61 | 257 | 1.25e-11 | 65.1 |
| MS.gene024264.t1 | AT5G48970 | 25.373 | 201 | 120 | 6 | 75 | 249 | 132 | 328 | 1.32e-11 | 65.5 |
| MS.gene024264.t1 | AT5G48970 | 23.431 | 239 | 159 | 4 | 80 | 295 | 23 | 260 | 3.00e-11 | 64.3 |
| MS.gene024264.t1 | AT4G01100 | 25.571 | 219 | 149 | 6 | 88 | 295 | 1 | 216 | 3.65e-11 | 63.9 |
| MS.gene024264.t1 | AT4G32400 | 28.261 | 184 | 117 | 4 | 72 | 249 | 205 | 379 | 4.19e-11 | 64.3 |
| MS.gene024264.t1 | AT1G07030 | 27.374 | 179 | 120 | 4 | 74 | 249 | 36 | 207 | 8.43e-11 | 63.2 |
| MS.gene024264.t1 | AT2G47490 | 27.174 | 184 | 122 | 5 | 91 | 265 | 129 | 309 | 8.95e-11 | 62.8 |
Find 123 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCCGACTTGACAAATTT+TGG | 0.064803 | 7.4:-23283946 | None:intergenic |
| GCACAGGGTGCTTGCAAATT+TGG | 0.141897 | 7.4:+23283727 | MS.gene024264:CDS |
| CCTTTGCTGCACTCATTCTT+TGG | 0.207799 | 7.4:-23284958 | None:intergenic |
| GTAGATCAAGGTCTTGTATT+TGG | 0.240422 | 7.4:-23283806 | None:intergenic |
| GTGAATAACCGGTAGGGTTT+TGG | 0.271570 | 7.4:-23282341 | None:intergenic |
| CACAGGGTGCTTGCAAATTT+GGG | 0.272981 | 7.4:+23283728 | MS.gene024264:CDS |
| ACAAGGGATTAGTGCCTCTA+TGG | 0.295974 | 7.4:+23284100 | MS.gene024264:CDS |
| ATCACCAACTGTTGCTCCTT+TGG | 0.305945 | 7.4:-23285082 | None:intergenic |
| GTCAAGTCGGAAGGAGCTTT+GGG | 0.313946 | 7.4:+23283955 | MS.gene024264:CDS |
| CTGCACTCATTCTTTGGTTG+TGG | 0.319170 | 7.4:-23284952 | None:intergenic |
| ACCAAGACCTCTTGCAAAAC+CGG | 0.326720 | 7.4:-23283914 | None:intergenic |
| TGCACTCATTCTTTGGTTGT+GGG | 0.330467 | 7.4:-23284951 | None:intergenic |
| TTCTATGCTGCTTGTACTGC+TGG | 0.334701 | 7.4:+23282493 | MS.gene024264:CDS |
| GGCGCGGCGGCGGAAGGAGC+GGG | 0.336833 | 7.4:-23282382 | None:intergenic |
| CCGCCTTCACTCCGTGGAAC+TGG | 0.348054 | 7.4:+23282403 | MS.gene024264:CDS |
| TTGTATTTGGCTGCATACTC+AGG | 0.350724 | 7.4:-23283793 | None:intergenic |
| CCTTCTCCTAAGGAACCTTT+TGG | 0.363854 | 7.4:+23282445 | MS.gene024264:CDS |
| TGTCAAGTCGGAAGGAGCTT+TGG | 0.366299 | 7.4:+23283954 | MS.gene024264:CDS |
| TTTGCTGGTGGATACATTGC+TGG | 0.369619 | 7.4:+23285000 | MS.gene024264:CDS |
| CGGCGCGGCGGCGGAAGGAG+CGG | 0.370068 | 7.4:-23282383 | None:intergenic |
| GTTCAAGGAGCAGGGAGTTA+AGG | 0.373432 | 7.4:+23283663 | MS.gene024264:CDS |
| CGTTGCACTTTGCCCATTCG+AGG | 0.378339 | 7.4:+23283864 | MS.gene024264:CDS |
| TTCAAGGAGCAGGGAGTTAA+GGG | 0.378873 | 7.4:+23283664 | MS.gene024264:CDS |
| TCCTTTGCAATCTCTGCAAC+GGG | 0.381681 | 7.4:-23285443 | None:intergenic |
| CCTCTCCGTATTGTTATGAT+TGG | 0.392836 | 7.4:+23285249 | MS.gene024264:CDS |
| GCAATCTCTGCAACGGGAGC+AGG | 0.392961 | 7.4:-23285437 | None:intergenic |
| GTTATGATTGGAACACTTAC+CGG | 0.392999 | 7.4:+23285261 | MS.gene024264:CDS |
| GGCGGCGGAAGGAGCGGGAC+CGG | 0.404628 | 7.4:-23282377 | None:intergenic |
| ATGCAGGCTGTTGCGAAGTT+TGG | 0.417122 | 7.4:+23285198 | MS.gene024264:intron |
| CTGACGATCTGGTGAATAAC+CGG | 0.417433 | 7.4:-23282352 | None:intergenic |
| AAGTACAAGAGCATCTCATC+AGG | 0.418546 | 7.4:+23283628 | MS.gene024264:CDS |
| GATGCTTTCAAAGTCTTTGT+GGG | 0.421116 | 7.4:+23285303 | MS.gene024264:CDS |
| TTGCAAGAGGTCTTGGTGAT+GGG | 0.421210 | 7.4:+23283920 | MS.gene024264:CDS |
| TGATGCTTTCAAAGTCTTTG+TGG | 0.429250 | 7.4:+23285302 | MS.gene024264:CDS |
| ATTCACCAGATCGTCAGTTC+CGG | 0.433147 | 7.4:+23282358 | MS.gene024264:CDS |
| AAGACCTTGATCTACCTTGC+TGG | 0.435876 | 7.4:+23283814 | MS.gene024264:CDS |
| AAGTACTATTCTGATATTGC+TGG | 0.438339 | 7.4:+23283769 | MS.gene024264:CDS |
| GAGATGCTCTTGTACTTGGC+AGG | 0.444922 | 7.4:-23283622 | None:intergenic |
| TTTGCAAGAGGTCTTGGTGA+TGG | 0.446061 | 7.4:+23283919 | MS.gene024264:CDS |
| AACTGGATCCGGTAGATTCA+TGG | 0.446346 | 7.4:+23282420 | MS.gene024264:CDS |
| TCACTCCGTGGAACTGGATC+CGG | 0.455713 | 7.4:+23282409 | MS.gene024264:CDS |
| AAGAGCATCTCATCAGGGTT+TGG | 0.458213 | 7.4:+23283634 | MS.gene024264:CDS |
| GAGTGAAGGCGGCGCGGCGG+CGG | 0.460339 | 7.4:-23282392 | None:intergenic |
| CTCATTCTTTGGTTGTGGGA+TGG | 0.461022 | 7.4:-23284947 | None:intergenic |
| GAAGGCGGCGCGGCGGCGGA+AGG | 0.466553 | 7.4:-23282388 | None:intergenic |
| TGATGAGATGCTCTTGTACT+TGG | 0.466999 | 7.4:-23283626 | None:intergenic |
| ATCTTGCCAAAAGGTTCCTT+AGG | 0.467490 | 7.4:-23282451 | None:intergenic |
| GGAGCAGCACCACCGGTTGT+TGG | 0.480665 | 7.4:-23285416 | None:intergenic |
| TTCCTTTGCAATCTCTGCAA+CGG | 0.481654 | 7.4:-23285444 | None:intergenic |
| ATATTTGTTAGGCCAACAAC+CGG | 0.488505 | 7.4:+23285404 | MS.gene024264:intron |
| CGGGACCGGAACTGACGATC+TGG | 0.489410 | 7.4:-23282363 | None:intergenic |
| CAAGGGATTAGTGCCTCTAT+GGG | 0.492057 | 7.4:+23284101 | MS.gene024264:CDS |
| TTATGATTGCAGGCTGTACA+AGG | 0.497538 | 7.4:+23284083 | MS.gene024264:intron |
| CTCAACAATGGTCTCAAAAG+AGG | 0.497947 | 7.4:-23284908 | None:intergenic |
| ATTCATGGTTCCTTCTCCTA+AGG | 0.502454 | 7.4:+23282435 | MS.gene024264:CDS |
| ATATATTCCCCACTGGGCTC+CGG | 0.504355 | 7.4:-23285280 | None:intergenic |
| CCAAAGAATGAGTGCAGCAA+AGG | 0.506478 | 7.4:+23284958 | MS.gene024264:CDS |
| GTTGCGAAGTTTGGTGTGGT+TGG | 0.508050 | 7.4:+23285207 | MS.gene024264:CDS |
| ATGATTCCTTCATTTCTCTA+CGG | 0.518236 | 7.4:+23282310 | MS.gene024264:CDS |
| TTCTTCCACCAAAACCCTAC+CGG | 0.523169 | 7.4:+23282333 | MS.gene024264:CDS |
| AAAGAGACAAGGTTATCAGC+AGG | 0.524035 | 7.4:-23285048 | None:intergenic |
| GGATGGGTCCCTACACTACT+TGG | 0.525566 | 7.4:+23283697 | MS.gene024264:CDS |
| ATGAAGGAATCATGTTTCTA+CGG | 0.525899 | 7.4:-23282300 | None:intergenic |
| TACATCTCGATCTTGCCAAA+AGG | 0.527813 | 7.4:-23282460 | None:intergenic |
| CTTAGTCAAGTGTAATATGC+AGG | 0.531917 | 7.4:+23282564 | MS.gene024264:CDS |
| ACTACTTGGTTACAGTGCAC+AGG | 0.535110 | 7.4:+23283711 | MS.gene024264:CDS |
| GAAGAACCGTAGAGAAATGA+AGG | 0.537076 | 7.4:-23282316 | None:intergenic |
| GGACTTTAACAGCCTCGAAT+GGG | 0.537558 | 7.4:-23283876 | None:intergenic |
| TGTATTTGGCTGCATACTCA+GGG | 0.537672 | 7.4:-23283792 | None:intergenic |
| GTACAAGCAGCATAGAAAGC+AGG | 0.538163 | 7.4:-23282487 | None:intergenic |
| AAGCATCATATATTCCCCAC+TGG | 0.538260 | 7.4:-23285287 | None:intergenic |
| CCAAAAGGTTCCTTAGGAGA+AGG | 0.540117 | 7.4:-23282445 | None:intergenic |
| AACACTTACCGGAGCCCAGT+GGG | 0.541109 | 7.4:+23285272 | MS.gene024264:CDS |
| TATGCTGCTTGTACTGCTGG+TGG | 0.545880 | 7.4:+23282496 | MS.gene024264:CDS |
| CAAAGAATGAGTGCAGCAAA+GGG | 0.546393 | 7.4:+23284959 | MS.gene024264:CDS |
| AGAAGGAACCATGAATCTAC+CGG | 0.550949 | 7.4:-23282428 | None:intergenic |
| CACTGTAACCAAGTAGTGTA+GGG | 0.552514 | 7.4:-23283705 | None:intergenic |
| GGGAGCAGGAGCAGCACCAC+CGG | 0.555232 | 7.4:-23285423 | None:intergenic |
| CCAAAATTTGTCAAGTCGGA+AGG | 0.555895 | 7.4:+23283946 | MS.gene024264:CDS |
| CCAAGACCTCTTGCAAAACC+GGG | 0.555939 | 7.4:-23283913 | None:intergenic |
| CGGACTTTAACAGCCTCGAA+TGG | 0.556736 | 7.4:-23283877 | None:intergenic |
| TGCTGGTTCAGCATCTGCTG+AGG | 0.562706 | 7.4:+23283831 | MS.gene024264:CDS |
| TGCAGCAAAGGGCTGCAACT+TGG | 0.564769 | 7.4:+23284970 | MS.gene024264:CDS |
| GTCCGTGTTCAAACTCAGCC+CGG | 0.566951 | 7.4:+23283895 | MS.gene024264:CDS |
| CTTATAGATTTGCTCAACAA+TGG | 0.571646 | 7.4:-23284920 | None:intergenic |
| CTACTTGGTTACAGTGCACA+GGG | 0.573210 | 7.4:+23283712 | MS.gene024264:CDS |
| GCCGCGCCGCCTTCACTCCG+TGG | 0.578747 | 7.4:+23282397 | MS.gene024264:CDS |
| GTGTTCCAATCATAACAATA+CGG | 0.581864 | 7.4:-23285254 | None:intergenic |
| GATCCAGTTCCACGGAGTGA+AGG | 0.581952 | 7.4:-23282406 | None:intergenic |
| TGAACCAGCAAGGTAGATCA+AGG | 0.583686 | 7.4:-23283818 | None:intergenic |
| GCACTGTAACCAAGTAGTGT+AGG | 0.584711 | 7.4:-23283706 | None:intergenic |
| ATGCTTTCAAAGTCTTTGTG+GGG | 0.587996 | 7.4:+23285304 | MS.gene024264:CDS |
| AGCATCATATATTCCCCACT+GGG | 0.588188 | 7.4:-23285286 | None:intergenic |
| CGTTGTTCAGAAAAGAGACA+AGG | 0.592020 | 7.4:-23285059 | None:intergenic |
| GGAATCTGCCTTCCCCATAG+AGG | 0.592926 | 7.4:-23284114 | None:intergenic |
| CGATCTGGTGAATAACCGGT+AGG | 0.594124 | 7.4:-23282348 | None:intergenic |
| AATACGGAGAGGGAGACCTC+TGG | 0.599896 | 7.4:-23285238 | None:intergenic |
| GTGGTTGGTCTCTTCACCAG+AGG | 0.608443 | 7.4:+23285222 | MS.gene024264:CDS |
| GGCTGTTGCGAAGTTTGGTG+TGG | 0.612493 | 7.4:+23285203 | MS.gene024264:intron |
| GATTAGTGCCTCTATGGGGA+AGG | 0.612930 | 7.4:+23284106 | MS.gene024264:CDS |
| CCAGTTCCACGGAGTGAAGG+CGG | 0.613356 | 7.4:-23282403 | None:intergenic |
| AACGCCAAAGGAGCAACAGT+TGG | 0.613664 | 7.4:+23285078 | MS.gene024264:CDS |
| ACGGAGTGAAGGCGGCGCGG+CGG | 0.615971 | 7.4:-23282395 | None:intergenic |
| GCTCCCAAAATTTGTCAAGT+CGG | 0.621493 | 7.4:+23283942 | MS.gene024264:CDS |
| AGATGCTCTTGTACTTGGCA+GGG | 0.621873 | 7.4:-23283621 | None:intergenic |
| CAATCATAACAATACGGAGA+GGG | 0.625979 | 7.4:-23285248 | None:intergenic |
| TCAAGTCGGAAGGAGCTTTG+GGG | 0.630516 | 7.4:+23283956 | MS.gene024264:CDS |
| TTACACTTGACTAAGTCAAG+AGG | 0.631255 | 7.4:-23282556 | None:intergenic |
| TCCCGTTGCAGAGATTGCAA+AGG | 0.642017 | 7.4:+23285442 | MS.gene024264:CDS |
| CAGCAGATGCTGAACCAGCA+AGG | 0.642348 | 7.4:-23283828 | None:intergenic |
| ATCTACCGGATCCAGTTCCA+CGG | 0.647055 | 7.4:-23282414 | None:intergenic |
| GCTGGTGGAATACTTAGCTG+TGG | 0.647800 | 7.4:+23282511 | MS.gene024264:CDS |
| GATCTGGTGAATAACCGGTA+GGG | 0.649771 | 7.4:-23282347 | None:intergenic |
| TATGATTGCAGGCTGTACAA+GGG | 0.654041 | 7.4:+23284084 | MS.gene024264:intron |
| TCCACGGAGTGAAGGCGGCG+CGG | 0.654298 | 7.4:-23282398 | None:intergenic |
| TTTGTTAGGCCAACAACCGG+TGG | 0.658305 | 7.4:+23285407 | MS.gene024264:intron |
| AACCGGGCTGAGTTTGAACA+CGG | 0.669826 | 7.4:-23283897 | None:intergenic |
| AGTACAAGAGCATCTCATCA+GGG | 0.671144 | 7.4:+23283629 | MS.gene024264:CDS |
| GTAGTGTAGGGACCCATCCG+CGG | 0.692836 | 7.4:-23283693 | None:intergenic |
| GAACACTTACCGGAGCCCAG+TGG | 0.694776 | 7.4:+23285271 | MS.gene024264:CDS |
| AAGGGATTAGTGCCTCTATG+GGG | 0.721830 | 7.4:+23284102 | MS.gene024264:CDS |
| ACACTTACCGGAGCCCAGTG+GGG | 0.735878 | 7.4:+23285273 | MS.gene024264:CDS |
| CCAATCATAACAATACGGAG+AGG | 0.738908 | 7.4:-23285249 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTGTTATATTTGTT+AGG | + | chr7.4:23285393-23285412 | MS.gene024264:intron | 10.0% |
| !! | AAAATAACAAAAAAGGATTA+TGG | - | chr7.4:23284632-23284651 | None:intergenic | 15.0% |
| !! | ACTAAATATATTATGATTGC+AGG | + | chr7.4:23284073-23284092 | MS.gene024264:intron | 20.0% |
| !! | ACTAATAAAATCGAAATTCT+AGG | - | chr7.4:23282842-23282861 | None:intergenic | 20.0% |
| !! | GCTGTTAAAATTTATCATTT+AGG | + | chr7.4:23284377-23284396 | MS.gene024264:intron | 20.0% |
| !! | TGTGATGAAATATTCATATT+TGG | + | chr7.4:23282985-23283004 | MS.gene024264:intron | 20.0% |
| !! | TGTTGAAGATTATTCATATT+TGG | + | chr7.4:23283253-23283272 | MS.gene024264:intron | 20.0% |
| !! | TTTGTAATAAATAGCATTTG+CGG | - | chr7.4:23283426-23283445 | None:intergenic | 20.0% |
| !!! | TGATATATTTGTTCTAAAGT+GGG | + | chr7.4:23285354-23285373 | MS.gene024264:intron | 20.0% |
| !!! | TTTTAGAAAATTCATTCAAG+AGG | + | chr7.4:23284426-23284445 | MS.gene024264:intron | 20.0% |
| ! | AAGAAAACTGCAAAATTCAA+TGG | - | chr7.4:23282895-23282914 | None:intergenic | 25.0% |
| ! | AATAGGAAGATAACTTATGA+TGG | + | chr7.4:23284805-23284824 | MS.gene024264:intron | 25.0% |
| ! | CTAAAGACATTCAAAAGAAT+GGG | - | chr7.4:23284483-23284502 | None:intergenic | 25.0% |
| ! | TAGAAGATATATGAGTAAGT+AGG | - | chr7.4:23284668-23284687 | None:intergenic | 25.0% |
| ! | TCTAAAGACATTCAAAAGAA+TGG | - | chr7.4:23284484-23284503 | None:intergenic | 25.0% |
| ! | TGAATGTTGTTGAATTGTTA+TGG | + | chr7.4:23282716-23282735 | MS.gene024264:intron | 25.0% |
| ! | TGATTGTGATACTGTTATAT+TGG | + | chr7.4:23282748-23282767 | MS.gene024264:intron | 25.0% |
| !! | TTATATCCTTGACAAACTTT+TGG | - | chr7.4:23284455-23284474 | None:intergenic | 25.0% |
| !!! | GCGATTTATGTTTGATTTTA+AGG | + | chr7.4:23282641-23282660 | MS.gene024264:intron | 25.0% |
| !!! | GTGATATATTTGTTCTAAAG+TGG | + | chr7.4:23285353-23285372 | MS.gene024264:intron | 25.0% |
| !!! | GTTTTACATGTCTTATTATC+AGG | - | chr7.4:23284848-23284867 | None:intergenic | 25.0% |
| !!! | TTTGATTTTTGTTGATCTAG+TGG | + | chr7.4:23282926-23282945 | MS.gene024264:intron | 25.0% |
| AAGTACTATTCTGATATTGC+TGG | + | chr7.4:23283769-23283788 | MS.gene024264:CDS | 30.0% | |
| ACAGCAAAAATATCAACAGA+CGG | - | chr7.4:23284362-23284381 | None:intergenic | 30.0% | |
| ATGATTCCTTCATTTCTCTA+CGG | + | chr7.4:23282310-23282329 | MS.gene024264:CDS | 30.0% | |
| CAAAAAAATGATGTGCAAAC+TGG | - | chr7.4:23284253-23284272 | None:intergenic | 30.0% | |
| CAAAATCTCAACAGAGTAAA+TGG | - | chr7.4:23283206-23283225 | None:intergenic | 30.0% | |
| CTCATTGGTATGAATATTGA+TGG | + | chr7.4:23284719-23284738 | MS.gene024264:intron | 30.0% | |
| CTTCAAATGTAGAACTTACA+TGG | - | chr7.4:23284138-23284157 | None:intergenic | 30.0% | |
| GTGTTCCAATCATAACAATA+CGG | - | chr7.4:23285257-23285276 | None:intergenic | 30.0% | |
| TAAAACTCATAAGTAGAAGC+AGG | - | chr7.4:23284411-23284430 | None:intergenic | 30.0% | |
| TAGGATTGGAATTGTTTAGT+TGG | + | chr7.4:23283543-23283562 | MS.gene024264:intron | 30.0% | |
| TGAGAAATGATGAAACTCAT+TGG | + | chr7.4:23284704-23284723 | MS.gene024264:intron | 30.0% | |
| TGTCATTATGTGTTACGAAT+AGG | + | chr7.4:23284788-23284807 | MS.gene024264:intron | 30.0% | |
| TGTGTTCAGTATTGTTAAAC+TGG | + | chr7.4:23283505-23283524 | MS.gene024264:intron | 30.0% | |
| ! | AGATTCAGCAATTTAAGACT+AGG | - | chr7.4:23283464-23283483 | None:intergenic | 30.0% |
| ! | ATAACTTATGATGGAACCTA+AGG | + | chr7.4:23284814-23284833 | MS.gene024264:intron | 30.0% |
| ! | ATGAAGGAATCATGTTTCTA+CGG | - | chr7.4:23282303-23282322 | None:intergenic | 30.0% |
| ! | CTTATAGATTTGCTCAACAA+TGG | - | chr7.4:23284923-23284942 | None:intergenic | 30.0% |
| ! | TAACTTATGATGGAACCTAA+GGG | + | chr7.4:23284815-23284834 | MS.gene024264:intron | 30.0% |
| ! | TAGATCTGAGAAATGCTTTT+AGG | + | chr7.4:23282687-23282706 | MS.gene024264:intron | 30.0% |
| !! | AGTCTGTTGATATTTTGAGT+AGG | + | chr7.4:23282955-23282974 | MS.gene024264:intron | 30.0% |
| !! | CTTGTTGTATGTTAAGTTGA+AGG | + | chr7.4:23282798-23282817 | MS.gene024264:intron | 30.0% |
| !! | GGTGTTTATTTGATTTGTGA+TGG | + | chr7.4:23282662-23282681 | MS.gene024264:intron | 30.0% |
| !!! | TTGTCGTTTTTAATTACCAC+AGG | - | chr7.4:23283131-23283150 | None:intergenic | 30.0% |
| ATCTATGCTAGGAATTAGGA+TGG | + | chr7.4:23284044-23284063 | MS.gene024264:intron | 35.0% | |
| ATGCTTTCAAAGTCTTTGTG+GGG | + | chr7.4:23285304-23285323 | MS.gene024264:CDS | 35.0% | |
| ATGGCAGCTAGAATAACAAA+AGG | - | chr7.4:23283187-23283206 | None:intergenic | 35.0% | |
| CAATCATAACAATACGGAGA+GGG | - | chr7.4:23285251-23285270 | None:intergenic | 35.0% | |
| CTTAGTCAAGTGTAATATGC+AGG | + | chr7.4:23282564-23282583 | MS.gene024264:CDS | 35.0% | |
| CTTGATCTATGCTAGGAATT+AGG | + | chr7.4:23284040-23284059 | MS.gene024264:intron | 35.0% | |
| GATGCTTTCAAAGTCTTTGT+GGG | + | chr7.4:23285303-23285322 | MS.gene024264:CDS | 35.0% | |
| GTTATGATTGGAACACTTAC+CGG | + | chr7.4:23285261-23285280 | MS.gene024264:CDS | 35.0% | |
| TCTATGCTAGGAATTAGGAT+GGG | + | chr7.4:23284045-23284064 | MS.gene024264:intron | 35.0% | |
| TGATGCTTTCAAAGTCTTTG+TGG | + | chr7.4:23285302-23285321 | MS.gene024264:CDS | 35.0% | |
| TGTTAAACTGGTTGTGTTGT+TGG | + | chr7.4:23283517-23283536 | MS.gene024264:intron | 35.0% | |
| TTACACTTGACTAAGTCAAG+AGG | - | chr7.4:23282559-23282578 | None:intergenic | 35.0% | |
| ! | AACTTATGATGGAACCTAAG+GGG | + | chr7.4:23284816-23284835 | MS.gene024264:intron | 35.0% |
| ! | ATATTTGTTAGGCCAACAAC+CGG | + | chr7.4:23285404-23285423 | MS.gene024264:intron | 35.0% |
| ! | GCTTTTCTTCTTCGTTTTCT+TGG | + | chr7.4:23282591-23282610 | MS.gene024264:intron | 35.0% |
| ! | GTAGATCAAGGTCTTGTATT+TGG | - | chr7.4:23283809-23283828 | None:intergenic | 35.0% |
| !! | AATTGACTTGAAGTCCAACA+AGG | - | chr7.4:23284324-23284343 | None:intergenic | 35.0% |
| !! | CTTCCGACTTGACAAATTTT+GGG | - | chr7.4:23283948-23283967 | None:intergenic | 35.0% |
| AAAGAGACAAGGTTATCAGC+AGG | - | chr7.4:23285051-23285070 | None:intergenic | 40.0% | |
| AAGCATCATATATTCCCCAC+TGG | - | chr7.4:23285290-23285309 | None:intergenic | 40.0% | |
| AAGTTGAAGGATCGCTTGAT+TGG | + | chr7.4:23282811-23282830 | MS.gene024264:intron | 40.0% | |
| ACTGCAATATCCTTGTTGAC+TGG | + | chr7.4:23284175-23284194 | MS.gene024264:intron | 40.0% | |
| AGAAGGAACCATGAATCTAC+CGG | - | chr7.4:23282431-23282450 | None:intergenic | 40.0% | |
| AGCATCATATATTCCCCACT+GGG | - | chr7.4:23285289-23285308 | None:intergenic | 40.0% | |
| AGGAAGCCAAAAGTTTGTCA+AGG | + | chr7.4:23284446-23284465 | MS.gene024264:intron | 40.0% | |
| ATCTTGCCAAAAGGTTCCTT+AGG | - | chr7.4:23282454-23282473 | None:intergenic | 40.0% | |
| ATTCATGGTTCCTTCTCCTA+AGG | + | chr7.4:23282435-23282454 | MS.gene024264:CDS | 40.0% | |
| CAAAGAATGAGTGCAGCAAA+GGG | + | chr7.4:23284959-23284978 | MS.gene024264:CDS | 40.0% | |
| CACTGTAACCAAGTAGTGTA+GGG | - | chr7.4:23283708-23283727 | None:intergenic | 40.0% | |
| CCAAAATTTGTCAAGTCGGA+AGG | + | chr7.4:23283946-23283965 | MS.gene024264:CDS | 40.0% | |
| CCAATCATAACAATACGGAG+AGG | - | chr7.4:23285252-23285271 | None:intergenic | 40.0% | |
| CCTCTCCGTATTGTTATGAT+TGG | + | chr7.4:23285249-23285268 | MS.gene024264:CDS | 40.0% | |
| CGTTGTTCAGAAAAGAGACA+AGG | - | chr7.4:23285062-23285081 | None:intergenic | 40.0% | |
| CTCAACAATGGTCTCAAAAG+AGG | - | chr7.4:23284911-23284930 | None:intergenic | 40.0% | |
| GAAGAACCGTAGAGAAATGA+AGG | - | chr7.4:23282319-23282338 | None:intergenic | 40.0% | |
| GCTCCCAAAATTTGTCAAGT+CGG | + | chr7.4:23283942-23283961 | MS.gene024264:CDS | 40.0% | |
| TACATCTCGATCTTGCCAAA+AGG | - | chr7.4:23282463-23282482 | None:intergenic | 40.0% | |
| TAGTTATGAAACACAGCCAC+CGG | + | chr7.4:23283077-23283096 | MS.gene024264:intron | 40.0% | |
| TATGATTGCAGGCTGTACAA+GGG | + | chr7.4:23284084-23284103 | MS.gene024264:intron | 40.0% | |
| TCCAACAAGGTAGTGTAACA+TGG | - | chr7.4:23284311-23284330 | None:intergenic | 40.0% | |
| TGATGAGATGCTCTTGTACT+TGG | - | chr7.4:23283629-23283648 | None:intergenic | 40.0% | |
| TGCACTCATTCTTTGGTTGT+GGG | - | chr7.4:23284954-23284973 | None:intergenic | 40.0% | |
| TGTATTTGGCTGCATACTCA+GGG | - | chr7.4:23283795-23283814 | None:intergenic | 40.0% | |
| TGTTATCTACCGTTTGATGC+AGG | + | chr7.4:23285182-23285201 | MS.gene024264:intron | 40.0% | |
| TGTTGCTCTTGATCTATGCT+AGG | + | chr7.4:23284033-23284052 | MS.gene024264:intron | 40.0% | |
| TTATCAGGTTTCAACCCCTT+AGG | - | chr7.4:23284833-23284852 | None:intergenic | 40.0% | |
| TTATGATTGCAGGCTGTACA+AGG | + | chr7.4:23284083-23284102 | MS.gene024264:intron | 40.0% | |
| TTCCTTTGCAATCTCTGCAA+CGG | - | chr7.4:23285447-23285466 | None:intergenic | 40.0% | |
| TTGTATTTGGCTGCATACTC+AGG | - | chr7.4:23283796-23283815 | None:intergenic | 40.0% | |
| ! | CTTCTTCGTTTTCTTGGATC+TGG | + | chr7.4:23282597-23282616 | MS.gene024264:intron | 40.0% |
| ! | TCTTTTCTGAACAACGCCAA+AGG | + | chr7.4:23285066-23285085 | MS.gene024264:CDS | 40.0% |
| ! | TTCAAAGTGTCCAGTCAACA+AGG | - | chr7.4:23284188-23284207 | None:intergenic | 40.0% |
| !! | AAGTACAAGAGCATCTCATC+AGG | + | chr7.4:23283628-23283647 | MS.gene024264:CDS | 40.0% |
| !! | AGTACAAGAGCATCTCATCA+GGG | + | chr7.4:23283629-23283648 | MS.gene024264:CDS | 40.0% |
| !! | CCTTCCGACTTGACAAATTT+TGG | - | chr7.4:23283949-23283968 | None:intergenic | 40.0% |
| !! | TGTGTTGTTGGTGTTAGGAT+TGG | + | chr7.4:23283529-23283548 | MS.gene024264:intron | 40.0% |
| !!! | AGGGTTTGGAGTTTTGTTCA+AGG | + | chr7.4:23283648-23283667 | MS.gene024264:CDS | 40.0% |
| AACTGGATCCGGTAGATTCA+TGG | + | chr7.4:23282420-23282439 | MS.gene024264:CDS | 45.0% | |
| AAGACCTTGATCTACCTTGC+TGG | + | chr7.4:23283814-23283833 | MS.gene024264:CDS | 45.0% | |
| ACCAAGACCTCTTGCAAAAC+CGG | - | chr7.4:23283917-23283936 | None:intergenic | 45.0% | |
| ACTACTTGGTTACAGTGCAC+AGG | + | chr7.4:23283711-23283730 | MS.gene024264:CDS | 45.0% | |
| AGATGCTCTTGTACTTGGCA+GGG | - | chr7.4:23283624-23283643 | None:intergenic | 45.0% | |
| ATCACCAACTGTTGCTCCTT+TGG | - | chr7.4:23285085-23285104 | None:intergenic | 45.0% | |
| ATTCACCAGATCGTCAGTTC+CGG | + | chr7.4:23282358-23282377 | MS.gene024264:CDS | 45.0% | |
| CATTGACACATCAACACCTG+TGG | + | chr7.4:23283112-23283131 | MS.gene024264:intron | 45.0% | |
| CCAAAAGGTTCCTTAGGAGA+AGG | - | chr7.4:23282448-23282467 | None:intergenic | 45.0% | |
| CCAAAGAATGAGTGCAGCAA+AGG | + | chr7.4:23284958-23284977 | MS.gene024264:CDS | 45.0% | |
| CCTTTGCTGCACTCATTCTT+TGG | - | chr7.4:23284961-23284980 | None:intergenic | 45.0% | |
| CTACTTGGTTACAGTGCACA+GGG | + | chr7.4:23283712-23283731 | MS.gene024264:CDS | 45.0% | |
| CTCATTCTTTGGTTGTGGGA+TGG | - | chr7.4:23284950-23284969 | None:intergenic | 45.0% | |
| CTGACGATCTGGTGAATAAC+CGG | - | chr7.4:23282355-23282374 | None:intergenic | 45.0% | |
| CTGCACTCATTCTTTGGTTG+TGG | - | chr7.4:23284955-23284974 | None:intergenic | 45.0% | |
| GATCTGGTGAATAACCGGTA+GGG | - | chr7.4:23282350-23282369 | None:intergenic | 45.0% | |
| GCACTGTAACCAAGTAGTGT+AGG | - | chr7.4:23283709-23283728 | None:intergenic | 45.0% | |
| GCCATGTTACACTACCTTGT+TGG | + | chr7.4:23284307-23284326 | MS.gene024264:intron | 45.0% | |
| GGACTTTAACAGCCTCGAAT+GGG | - | chr7.4:23283879-23283898 | None:intergenic | 45.0% | |
| GTACAAGCAGCATAGAAAGC+AGG | - | chr7.4:23282490-23282509 | None:intergenic | 45.0% | |
| GTTACTTCCGTTACCATCTG+AGG | + | chr7.4:23284223-23284242 | MS.gene024264:intron | 45.0% | |
| TCCTTTGCAATCTCTGCAAC+GGG | - | chr7.4:23285446-23285465 | None:intergenic | 45.0% | |
| TGAACCAGCAAGGTAGATCA+AGG | - | chr7.4:23283821-23283840 | None:intergenic | 45.0% | |
| TGGAATGCCTCAGATGGTAA+CGG | - | chr7.4:23284233-23284252 | None:intergenic | 45.0% | |
| TTCAAGGAGCAGGGAGTTAA+GGG | + | chr7.4:23283664-23283683 | MS.gene024264:CDS | 45.0% | |
| TTCTTCCACCAAAACCCTAC+CGG | + | chr7.4:23282333-23282352 | MS.gene024264:CDS | 45.0% | |
| TTTGCAAGAGGTCTTGGTGA+TGG | + | chr7.4:23283919-23283938 | MS.gene024264:CDS | 45.0% | |
| ! | AAGGGATTAGTGCCTCTATG+GGG | + | chr7.4:23284102-23284121 | MS.gene024264:CDS | 45.0% |
| ! | ACAAGGGATTAGTGCCTCTA+TGG | + | chr7.4:23284100-23284119 | MS.gene024264:CDS | 45.0% |
| ! | CAAGGGATTAGTGCCTCTAT+GGG | + | chr7.4:23284101-23284120 | MS.gene024264:CDS | 45.0% |
| ! | CACAGGGTGCTTGCAAATTT+GGG | + | chr7.4:23283728-23283747 | MS.gene024264:CDS | 45.0% |
| ! | CCTTCTCCTAAGGAACCTTT+TGG | + | chr7.4:23282445-23282464 | MS.gene024264:CDS | 45.0% |
| ! | CTGGTTGTGTTGTTGGTGTT+AGG | + | chr7.4:23283524-23283543 | MS.gene024264:intron | 45.0% |
| ! | GTGAATAACCGGTAGGGTTT+TGG | - | chr7.4:23282344-23282363 | None:intergenic | 45.0% |
| ! | TTCTATGCTGCTTGTACTGC+TGG | + | chr7.4:23282493-23282512 | MS.gene024264:CDS | 45.0% |
| ! | TTGCAAGAGGTCTTGGTGAT+GGG | + | chr7.4:23283920-23283939 | MS.gene024264:CDS | 45.0% |
| ! | TTTGCTGGTGGATACATTGC+TGG | + | chr7.4:23285000-23285019 | MS.gene024264:CDS | 45.0% |
| !! | AAGAGCATCTCATCAGGGTT+TGG | + | chr7.4:23283634-23283653 | MS.gene024264:CDS | 45.0% |
| !! | AATAACCGGTAGGGTTTTGG+TGG | - | chr7.4:23282341-23282360 | None:intergenic | 45.0% |
| !!! | CAACTTGGTGTCAGTTTTGC+TGG | + | chr7.4:23284985-23285004 | MS.gene024264:CDS | 45.0% |
| !!! | GGAGTTTTGTTCAAGGAGCA+GGG | + | chr7.4:23283655-23283674 | MS.gene024264:CDS | 45.0% |
| !!! | TGGAGTTTTGTTCAAGGAGC+AGG | + | chr7.4:23283654-23283673 | MS.gene024264:CDS | 45.0% |
| !! | AAAAAAAAAAATAACAAAAA+AGG | - | chr7.4:23284639-23284658 | None:intergenic | 5.0% |
| !! | AATATAACAAAAAATTTATT+AGG | - | chr7.4:23285389-23285408 | None:intergenic | 5.0% |
| AACCGGGCTGAGTTTGAACA+CGG | - | chr7.4:23283900-23283919 | None:intergenic | 50.0% | |
| AACGCCAAAGGAGCAACAGT+TGG | + | chr7.4:23285078-23285097 | MS.gene024264:CDS | 50.0% | |
| ATATATTCCCCACTGGGCTC+CGG | - | chr7.4:23285283-23285302 | None:intergenic | 50.0% | |
| ATCTACCGGATCCAGTTCCA+CGG | - | chr7.4:23282417-23282436 | None:intergenic | 50.0% | |
| ATGCAGGCTGTTGCGAAGTT+TGG | + | chr7.4:23285198-23285217 | MS.gene024264:intron | 50.0% | |
| CCAAGACCTCTTGCAAAACC+GGG | - | chr7.4:23283916-23283935 | None:intergenic | 50.0% | |
| CGATCTGGTGAATAACCGGT+AGG | - | chr7.4:23282351-23282370 | None:intergenic | 50.0% | |
| CGGACTTTAACAGCCTCGAA+TGG | - | chr7.4:23283880-23283899 | None:intergenic | 50.0% | |
| GAGATGCTCTTGTACTTGGC+AGG | - | chr7.4:23283625-23283644 | None:intergenic | 50.0% | |
| GATTAGTGCCTCTATGGGGA+AGG | + | chr7.4:23284106-23284125 | MS.gene024264:CDS | 50.0% | |
| GCAAACTGGAATGCCTCAGA+TGG | - | chr7.4:23284239-23284258 | None:intergenic | 50.0% | |
| GCTGGTGGAATACTTAGCTG+TGG | + | chr7.4:23282511-23282530 | MS.gene024264:CDS | 50.0% | |
| GTCAAGTCGGAAGGAGCTTT+GGG | + | chr7.4:23283955-23283974 | MS.gene024264:CDS | 50.0% | |
| GTTCAAGGAGCAGGGAGTTA+AGG | + | chr7.4:23283663-23283682 | MS.gene024264:CDS | 50.0% | |
| TCAAGTCGGAAGGAGCTTTG+GGG | + | chr7.4:23283956-23283975 | MS.gene024264:CDS | 50.0% | |
| TCCCGTTGCAGAGATTGCAA+AGG | + | chr7.4:23285442-23285461 | MS.gene024264:CDS | 50.0% | |
| TCGCAACAGCCTGCATCAAA+CGG | - | chr7.4:23285194-23285213 | None:intergenic | 50.0% | |
| TGTCAAGTCGGAAGGAGCTT+TGG | + | chr7.4:23283954-23283973 | MS.gene024264:CDS | 50.0% | |
| TTTGTTAGGCCAACAACCGG+TGG | + | chr7.4:23285407-23285426 | MS.gene024264:intron | 50.0% | |
| ! | GCACAGGGTGCTTGCAAATT+TGG | + | chr7.4:23283727-23283746 | MS.gene024264:CDS | 50.0% |
| ! | TATGCTGCTTGTACTGCTGG+TGG | + | chr7.4:23282496-23282515 | MS.gene024264:CDS | 50.0% |
| !! | GGAGTTAAGGGCTTTTTCCG+CGG | + | chr7.4:23283676-23283695 | MS.gene024264:CDS | 50.0% |
| !! | GTTGCGAAGTTTGGTGTGGT+TGG | + | chr7.4:23285207-23285226 | MS.gene024264:CDS | 50.0% |
| !! | TAAGGGCTTTTTCCGCGGAT+GGG | + | chr7.4:23283681-23283700 | MS.gene024264:CDS | 50.0% |
| !! | TTAAGGGCTTTTTCCGCGGA+TGG | + | chr7.4:23283680-23283699 | MS.gene024264:CDS | 50.0% |
| !!! | CTTGGTGTCAGTTTTGCTGG+TGG | + | chr7.4:23284988-23285007 | MS.gene024264:CDS | 50.0% |
| AACACTTACCGGAGCCCAGT+GGG | + | chr7.4:23285272-23285291 | MS.gene024264:CDS | 55.0% | |
| AATACGGAGAGGGAGACCTC+TGG | - | chr7.4:23285241-23285260 | None:intergenic | 55.0% | |
| CAGCAGATGCTGAACCAGCA+AGG | - | chr7.4:23283831-23283850 | None:intergenic | 55.0% | |
| CGTTGCACTTTGCCCATTCG+AGG | + | chr7.4:23283864-23283883 | MS.gene024264:CDS | 55.0% | |
| GATCCAGTTCCACGGAGTGA+AGG | - | chr7.4:23282409-23282428 | None:intergenic | 55.0% | |
| GGAATCTGCCTTCCCCATAG+AGG | - | chr7.4:23284117-23284136 | None:intergenic | 55.0% | |
| GGATGGGTCCCTACACTACT+TGG | + | chr7.4:23283697-23283716 | MS.gene024264:CDS | 55.0% | |
| GTCAATGACCGTGTCGTGAC+CGG | - | chr7.4:23283099-23283118 | None:intergenic | 55.0% | |
| GTCCGTGTTCAAACTCAGCC+CGG | + | chr7.4:23283895-23283914 | MS.gene024264:CDS | 55.0% | |
| TCACTCCGTGGAACTGGATC+CGG | + | chr7.4:23282409-23282428 | MS.gene024264:CDS | 55.0% | |
| TGCAGCAAAGGGCTGCAACT+TGG | + | chr7.4:23284970-23284989 | MS.gene024264:CDS | 55.0% | |
| ! | ACTCAGCCCGGTTTTGCAAG+AGG | + | chr7.4:23283907-23283926 | MS.gene024264:CDS | 55.0% |
| ! | CCCGGTTTTGCAAGAGGTCT+TGG | + | chr7.4:23283913-23283932 | MS.gene024264:CDS | 55.0% |
| ! | GGCTGTTGCGAAGTTTGGTG+TGG | + | chr7.4:23285203-23285222 | MS.gene024264:intron | 55.0% |
| !! | GTGGTTGGTCTCTTCACCAG+AGG | + | chr7.4:23285222-23285241 | MS.gene024264:CDS | 55.0% |
| !! | TGCTGGTTCAGCATCTGCTG+AGG | + | chr7.4:23283831-23283850 | MS.gene024264:CDS | 55.0% |
| AATGACCGTGTCGTGACCGG+TGG | - | chr7.4:23283096-23283115 | None:intergenic | 60.0% | |
| ACACTTACCGGAGCCCAGTG+GGG | + | chr7.4:23285273-23285292 | MS.gene024264:CDS | 60.0% | |
| CCAGTTCCACGGAGTGAAGG+CGG | - | chr7.4:23282406-23282425 | None:intergenic | 60.0% | |
| GAACACTTACCGGAGCCCAG+TGG | + | chr7.4:23285271-23285290 | MS.gene024264:CDS | 60.0% | |
| GCAATCTCTGCAACGGGAGC+AGG | - | chr7.4:23285440-23285459 | None:intergenic | 60.0% | |
| GTAGTGTAGGGACCCATCCG+CGG | - | chr7.4:23283696-23283715 | None:intergenic | 60.0% | |
| CACAGCCACCGGTCACGACA+CGG | + | chr7.4:23283088-23283107 | MS.gene024264:intron | 65.0% | |
| CCGCCTTCACTCCGTGGAAC+TGG | + | chr7.4:23282403-23282422 | MS.gene024264:CDS | 65.0% | |
| CGGGACCGGAACTGACGATC+TGG | - | chr7.4:23282366-23282385 | None:intergenic | 65.0% | |
| ! | GGAGCAGCACCACCGGTTGT+TGG | - | chr7.4:23285419-23285438 | None:intergenic | 65.0% |
| GGGAGCAGGAGCAGCACCAC+CGG | - | chr7.4:23285426-23285445 | None:intergenic | 70.0% | |
| TCCACGGAGTGAAGGCGGCG+CGG | - | chr7.4:23282401-23282420 | None:intergenic | 70.0% | |
| ACGGAGTGAAGGCGGCGCGG+CGG | - | chr7.4:23282398-23282417 | None:intergenic | 75.0% | |
| ! | GAGTGAAGGCGGCGCGGCGG+CGG | - | chr7.4:23282395-23282414 | None:intergenic | 80.0% |
| ! | GCCGCGCCGCCTTCACTCCG+TGG | + | chr7.4:23282397-23282416 | MS.gene024264:CDS | 80.0% |
| ! | GGCGGCGGAAGGAGCGGGAC+CGG | - | chr7.4:23282380-23282399 | None:intergenic | 80.0% |
| ! | CGGCGCGGCGGCGGAAGGAG+CGG | - | chr7.4:23282386-23282405 | None:intergenic | 85.0% |
| ! | GAAGGCGGCGCGGCGGCGGA+AGG | - | chr7.4:23282391-23282410 | None:intergenic | 85.0% |
| ! | GGCGCGGCGGCGGAAGGAGC+GGG | - | chr7.4:23282385-23282404 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 23282274 | 23285469 | 23282274 | ID=MS.gene024264 |
| chr7.4 | mRNA | 23282274 | 23285469 | 23282274 | ID=MS.gene024264.t1;Parent=MS.gene024264 |
| chr7.4 | exon | 23282274 | 23282585 | 23282274 | ID=MS.gene024264.t1.exon1;Parent=MS.gene024264.t1 |
| chr7.4 | CDS | 23282274 | 23282585 | 23282274 | ID=cds.MS.gene024264.t1;Parent=MS.gene024264.t1 |
| chr7.4 | exon | 23283616 | 23283977 | 23283616 | ID=MS.gene024264.t1.exon2;Parent=MS.gene024264.t1 |
| chr7.4 | CDS | 23283616 | 23283977 | 23283616 | ID=cds.MS.gene024264.t1;Parent=MS.gene024264.t1 |
| chr7.4 | exon | 23284095 | 23284138 | 23284095 | ID=MS.gene024264.t1.exon3;Parent=MS.gene024264.t1 |
| chr7.4 | CDS | 23284095 | 23284138 | 23284095 | ID=cds.MS.gene024264.t1;Parent=MS.gene024264.t1 |
| chr7.4 | exon | 23284890 | 23285104 | 23284890 | ID=MS.gene024264.t1.exon4;Parent=MS.gene024264.t1 |
| chr7.4 | CDS | 23284890 | 23285104 | 23284890 | ID=cds.MS.gene024264.t1;Parent=MS.gene024264.t1 |
| chr7.4 | exon | 23285204 | 23285328 | 23285204 | ID=MS.gene024264.t1.exon5;Parent=MS.gene024264.t1 |
| chr7.4 | CDS | 23285204 | 23285328 | 23285204 | ID=cds.MS.gene024264.t1;Parent=MS.gene024264.t1 |
| chr7.4 | exon | 23285415 | 23285469 | 23285415 | ID=MS.gene024264.t1.exon6;Parent=MS.gene024264.t1 |
| chr7.4 | CDS | 23285415 | 23285469 | 23285415 | ID=cds.MS.gene024264.t1;Parent=MS.gene024264.t1 |
| Gene Sequence |
| Protein sequence |
