Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024777.t1 | XP_003610850.1 | 96.7 | 539 | 17 | 1 | 1 | 538 | 1 | 539 | 1.60E-271 | 944.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024777.t1 | Q9LW77 | 77.1 | 407 | 88 | 2 | 1 | 403 | 1 | 406 | 1.1e-172 | 607.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024777.t1 | G7K6H0 | 96.7 | 539 | 17 | 1 | 1 | 538 | 1 | 539 | 1.2e-271 | 944.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31164 | MS.gene024777 | PPI |
| MS.gene052128 | MS.gene024777 | PPI |
| MS.gene30950 | MS.gene024777 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024777.t1 | MTR_5g007710 | 97.217 | 539 | 14 | 1 | 1 | 538 | 1 | 539 | 0.0 | 1092 |
| MS.gene024777.t1 | MTR_5g007710 | 98.276 | 406 | 7 | 0 | 1 | 406 | 1 | 406 | 0.0 | 830 |
| MS.gene024777.t1 | MTR_4g077800 | 72.608 | 533 | 111 | 5 | 1 | 526 | 1 | 505 | 0.0 | 757 |
| MS.gene024777.t1 | MTR_4g077800 | 75.198 | 504 | 101 | 5 | 1 | 497 | 1 | 487 | 0.0 | 747 |
| MS.gene024777.t1 | MTR_3g007760 | 27.226 | 393 | 217 | 12 | 29 | 379 | 57 | 422 | 1.19e-29 | 123 |
| MS.gene024777.t1 | MTR_3g007760 | 26.667 | 360 | 205 | 10 | 62 | 379 | 57 | 399 | 1.48e-27 | 117 |
| MS.gene024777.t1 | MTR_4g077703 | 43.529 | 85 | 34 | 2 | 411 | 490 | 25 | 100 | 4.43e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024777.t1 | AT3G16090 | 65.283 | 530 | 135 | 9 | 1 | 526 | 1 | 485 | 0.0 | 669 |
| MS.gene024777.t1 | AT1G65040 | 72.249 | 418 | 112 | 2 | 1 | 414 | 1 | 418 | 0.0 | 630 |
| MS.gene024777.t1 | AT1G65040 | 68.900 | 418 | 103 | 3 | 1 | 414 | 1 | 395 | 0.0 | 588 |
| MS.gene024777.t1 | AT1G65040 | 71.053 | 304 | 84 | 2 | 115 | 414 | 44 | 347 | 7.88e-157 | 453 |
| MS.gene024777.t1 | AT1G65040 | 68.182 | 286 | 65 | 2 | 119 | 401 | 1 | 263 | 8.54e-138 | 402 |
| MS.gene024777.t1 | AT1G65040 | 72.727 | 231 | 60 | 1 | 176 | 403 | 23 | 253 | 2.47e-121 | 357 |
| MS.gene024777.t1 | AT1G65040 | 73.568 | 227 | 57 | 1 | 180 | 403 | 1 | 227 | 9.78e-121 | 357 |
| MS.gene024777.t1 | AT4G25230 | 28.108 | 370 | 213 | 9 | 4 | 330 | 20 | 379 | 7.19e-28 | 118 |
| MS.gene024777.t1 | AT4G25230 | 28.108 | 370 | 213 | 9 | 4 | 330 | 20 | 379 | 7.19e-28 | 118 |
| MS.gene024777.t1 | AT4G25230 | 28.108 | 370 | 213 | 9 | 4 | 330 | 20 | 379 | 7.19e-28 | 118 |
| MS.gene024777.t1 | AT5G51450 | 27.299 | 348 | 201 | 9 | 25 | 330 | 42 | 379 | 2.11e-21 | 98.2 |
| MS.gene024777.t1 | AT5G51450 | 27.299 | 348 | 201 | 9 | 25 | 330 | 42 | 379 | 2.12e-21 | 98.6 |
| MS.gene024777.t1 | AT2G44581 | 41.250 | 80 | 40 | 3 | 265 | 338 | 44 | 122 | 5.55e-12 | 63.9 |
| MS.gene024777.t1 | AT5G01960 | 32.812 | 128 | 80 | 4 | 214 | 337 | 285 | 410 | 1.32e-11 | 67.0 |
Find 126 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTGAGACTTTGAGATATT+TGG | 0.085151 | 5.3:-2382870 | None:intergenic |
| TTTACCAGTGTTGATCTTAA+TGG | 0.174947 | 5.3:+2382696 | MS.gene024777:CDS |
| CACGGCATTGTTGTTAATTA+AGG | 0.194438 | 5.3:+2379689 | MS.gene024777:CDS |
| TAAAAGATACAATTCGAATA+TGG | 0.213863 | 5.3:-2379779 | None:intergenic |
| TACATGGCCCCTTTGAATTA+TGG | 0.214808 | 5.3:+2382828 | MS.gene024777:CDS |
| AGCTCTTCAGGGGTTGCTTC+TGG | 0.229501 | 5.3:-2381059 | None:intergenic |
| GGAGGAAAGGGTACATTTAT+TGG | 0.250478 | 5.3:-2382771 | None:intergenic |
| CTATGTCACTGACATACTTA+TGG | 0.261500 | 5.3:+2380531 | MS.gene024777:CDS |
| TTGCCTCTGCTTTCTGATAA+TGG | 0.303513 | 5.3:-2383109 | None:intergenic |
| TCTCGTATAGCTCCCGTATT+AGG | 0.318051 | 5.3:-2380959 | None:intergenic |
| GGGAGCTATACGAGACATTT+AGG | 0.322570 | 5.3:+2380967 | MS.gene024777:CDS |
| ACTCACGCATTGAGCTCTTC+AGG | 0.330562 | 5.3:-2381071 | None:intergenic |
| GCTTCTTCTTAACATGGGTT+TGG | 0.359369 | 5.3:+2379500 | MS.gene024777:CDS |
| AAGAAGCACCAAACTGATCT+TGG | 0.383609 | 5.3:-2379484 | None:intergenic |
| GAAAATGGAACAACTGTTGC+TGG | 0.384815 | 5.3:+2381325 | MS.gene024777:CDS |
| GCAATCATGGAGGGAGGTTA+TGG | 0.389288 | 5.3:+2379605 | MS.gene024777:CDS |
| GAAGGCAATGAACATGAAAA+AGG | 0.391922 | 5.3:-2381243 | None:intergenic |
| AGTTGATCTATCAGAAACTA+TGG | 0.394151 | 5.3:+2380924 | MS.gene024777:intron |
| GAATTCCCTTGCACCTAATA+CGG | 0.394661 | 5.3:+2380946 | MS.gene024777:CDS |
| ATATGCTGGTCTTAGTTTGA+TGG | 0.410943 | 5.3:+2379386 | MS.gene024777:CDS |
| AATTAAGGCTTTGCATTGGT+TGG | 0.413236 | 5.3:+2379704 | MS.gene024777:CDS |
| AAAAGATACAATTCGAATAT+GGG | 0.417391 | 5.3:-2379778 | None:intergenic |
| GTGTCCGCATATCAGTTTCT+TGG | 0.418930 | 5.3:-2381221 | None:intergenic |
| ACACCATTGCCGGATAAAAC+TGG | 0.424380 | 5.3:-2379449 | None:intergenic |
| TCTTAGTTTGATGGCAACTT+TGG | 0.428785 | 5.3:+2379395 | MS.gene024777:CDS |
| TTCAACTTCCAAGATCAGTT+TGG | 0.429813 | 5.3:+2379476 | MS.gene024777:CDS |
| TATGTGGCAACTAACTAAAA+AGG | 0.431227 | 5.3:+2379536 | MS.gene024777:CDS |
| ATGTTCATTGCCTTCGATCA+TGG | 0.435620 | 5.3:+2381251 | MS.gene024777:CDS |
| TTGCCCTACTTGCAGAGCCT+TGG | 0.442641 | 5.3:+2381291 | MS.gene024777:CDS |
| ACCCCTCTCCATAATTCAAA+GGG | 0.443292 | 5.3:-2382836 | None:intergenic |
| ACACTGGTAAATTCAGCAAC+CGG | 0.445646 | 5.3:-2382684 | None:intergenic |
| GTTGAAAGATACACCATTGC+CGG | 0.449042 | 5.3:-2379459 | None:intergenic |
| TCTCAAATTTACAGACCTCC+TGG | 0.450252 | 5.3:+2382645 | MS.gene024777:intron |
| ATGGTTGGGAAGGAAGAAAA+TGG | 0.454733 | 5.3:-2382806 | None:intergenic |
| CAACCAAGGCTCTGCAAGTA+GGG | 0.460830 | 5.3:-2381294 | None:intergenic |
| TCTTCCTTCCCAACCATACA+TGG | 0.460959 | 5.3:+2382812 | MS.gene024777:CDS |
| GGTACATTTATTGGCCCACC+AGG | 0.464241 | 5.3:-2382762 | None:intergenic |
| CTCACGCATTGAGCTCTTCA+GGG | 0.465783 | 5.3:-2381070 | None:intergenic |
| TTTGGTGCTTCTTCTTAACA+TGG | 0.467442 | 5.3:+2379494 | MS.gene024777:CDS |
| AGGCAAGCTTAGCTCTTCTT+CGG | 0.472020 | 5.3:+2383126 | MS.gene024777:CDS |
| AAATATCTCAAAGTCTCAGC+TGG | 0.472616 | 5.3:+2382872 | MS.gene024777:CDS |
| TAATTCAAAGGGGCCATGTA+TGG | 0.472796 | 5.3:-2382825 | None:intergenic |
| GCCGTCATCAACACTTCTCT+TGG | 0.478127 | 5.3:-2383083 | None:intergenic |
| AATGTACCCTTTCCTCCAAC+GGG | 0.480269 | 5.3:+2382777 | MS.gene024777:CDS |
| CAAAGGGGCCATGTATGGTT+GGG | 0.485097 | 5.3:-2382820 | None:intergenic |
| TCAAAGGGGCCATGTATGGT+TGG | 0.502197 | 5.3:-2382821 | None:intergenic |
| TGGTTATTATGTGTGTTATG+TGG | 0.505143 | 5.3:+2379520 | MS.gene024777:CDS |
| TACCGTACAAAAGAAGTTGC+GGG | 0.505866 | 5.3:-2381699 | None:intergenic |
| AAGTGTCCCGTTGGAGGAAA+GGG | 0.509329 | 5.3:-2382783 | None:intergenic |
| GGGTAATCTTCGAGAGGCTG+AGG | 0.510249 | 5.3:+2379566 | MS.gene024777:CDS |
| CACTGGTAAATTCAGCAACC+GGG | 0.511841 | 5.3:-2382683 | None:intergenic |
| AGAGGCTTAATGAGCAATCA+TGG | 0.512252 | 5.3:+2379592 | MS.gene024777:CDS |
| CTCAGTTACATTCCTTGCGA+TGG | 0.515574 | 5.3:+2379665 | MS.gene024777:CDS |
| AAGCTGCAGCAGCAGCTGCT+TGG | 0.515752 | 5.3:-2381647 | None:intergenic |
| AAATGGAAGTGTCCCGTTGG+AGG | 0.517068 | 5.3:-2382789 | None:intergenic |
| CAAAATCAGTTTCATATCCC+TGG | 0.517693 | 5.3:+2382744 | MS.gene024777:CDS |
| TGCAACCCCACTGCTAAGCT+CGG | 0.519047 | 5.3:-2381592 | None:intergenic |
| GGGATAGGCACTGGAAGTAC+AGG | 0.519572 | 5.3:+2381564 | MS.gene024777:intron |
| TTGGTGCTTCTTCTTAACAT+GGG | 0.533149 | 5.3:+2379495 | MS.gene024777:CDS |
| AACCCCTCTCCATAATTCAA+AGG | 0.533374 | 5.3:-2382837 | None:intergenic |
| GAAGTGTCCCGTTGGAGGAA+AGG | 0.534440 | 5.3:-2382784 | None:intergenic |
| CTCAAATTTACAGACCTCCT+GGG | 0.535620 | 5.3:+2382646 | MS.gene024777:intron |
| TCGAGGTAAAATGTGAAGAC+TGG | 0.536892 | 5.3:-2380574 | None:intergenic |
| AAAGAAGAAGCACAGATACA+TGG | 0.542978 | 5.3:-2380623 | None:intergenic |
| GCATTTGATACAAACATGGC+AGG | 0.543519 | 5.3:+2379851 | MS.gene024777:CDS |
| GCCCCTTTGAATTATGGAGA+GGG | 0.543621 | 5.3:+2382834 | MS.gene024777:CDS |
| TACATTCCTTGCGATGGTCA+CGG | 0.545911 | 5.3:+2379671 | MS.gene024777:CDS |
| AATTCCCTTGCACCTAATAC+GGG | 0.549400 | 5.3:+2380947 | MS.gene024777:CDS |
| ACAACCAAGGCTCTGCAAGT+AGG | 0.549795 | 5.3:-2381295 | None:intergenic |
| TTCGAGAGGCTGAGGTTGAG+AGG | 0.554605 | 5.3:+2379574 | MS.gene024777:CDS |
| AAATGCTATCAAGAAGAAGA+AGG | 0.563718 | 5.3:-2379809 | None:intergenic |
| GGCCTCTACTGTTAAATGCA+TGG | 0.568487 | 5.3:-2379428 | None:intergenic |
| TCTTCTTCGGAGATTCAAGA+TGG | 0.568683 | 5.3:+2383139 | MS.gene024777:CDS |
| AATTCTACAACAACAGATTG+AGG | 0.573465 | 5.3:+2382908 | MS.gene024777:CDS |
| CCCCTTTGAATTATGGAGAG+GGG | 0.574251 | 5.3:+2382835 | MS.gene024777:CDS |
| ACTGTTGCTGGAGGTCAGCA+AGG | 0.579615 | 5.3:+2381337 | MS.gene024777:CDS |
| CAATCAGTTGGTCATCAACA+TGG | 0.579956 | 5.3:+2381364 | MS.gene024777:CDS |
| TAGCTCCCGTATTAGGTGCA+AGG | 0.580282 | 5.3:-2380952 | None:intergenic |
| AAATGTACCCTTTCCTCCAA+CGG | 0.580702 | 5.3:+2382776 | MS.gene024777:CDS |
| TGGGATAATGTGGTCACTGT+AGG | 0.584012 | 5.3:-2379759 | None:intergenic |
| AGCTCCCGTATTAGGTGCAA+GGG | 0.585630 | 5.3:-2380951 | None:intergenic |
| TGTTAATTAAGGCTTTGCAT+TGG | 0.586293 | 5.3:+2379700 | MS.gene024777:CDS |
| AATTCGAATATGGGATAATG+TGG | 0.586853 | 5.3:-2379769 | None:intergenic |
| CATACTTATGGAGGGACAGT+GGG | 0.587918 | 5.3:+2380543 | MS.gene024777:CDS |
| GAAAGCAAAGAACAGTGAAA+CGG | 0.588487 | 5.3:-2379877 | None:intergenic |
| TACCATGCATTTAACAGTAG+AGG | 0.591610 | 5.3:+2379426 | MS.gene024777:CDS |
| TGGGTACACTAATTATCCCC+CGG | 0.598531 | 5.3:+2382665 | MS.gene024777:CDS |
| TGTCACTGACATACTTATGG+AGG | 0.600216 | 5.3:+2380534 | MS.gene024777:CDS |
| GTCAAACCGAGCTTAGCAGT+GGG | 0.600788 | 5.3:+2381586 | MS.gene024777:CDS |
| GGGGCCATGTATGGTTGGGA+AGG | 0.600879 | 5.3:-2382816 | None:intergenic |
| CAGCAAGGATCACAATCAGT+TGG | 0.603916 | 5.3:+2381352 | MS.gene024777:CDS |
| TTCTCCATTAAGATCAACAC+TGG | 0.606092 | 5.3:-2382700 | None:intergenic |
| GTCACTGACATACTTATGGA+GGG | 0.607377 | 5.3:+2380535 | MS.gene024777:CDS |
| TCACGCATTGAGCTCTTCAG+GGG | 0.610326 | 5.3:-2381069 | None:intergenic |
| AATCAGTTTCATATCCCTGG+TGG | 0.611448 | 5.3:+2382747 | MS.gene024777:CDS |
| GCAAGTCCCTAACAAGGTCG+AGG | 0.613179 | 5.3:-2380591 | None:intergenic |
| ACATACTTATGGAGGGACAG+TGG | 0.615041 | 5.3:+2380542 | MS.gene024777:CDS |
| TAATGTGGTCACTGTAGGAG+TGG | 0.615046 | 5.3:-2379754 | None:intergenic |
| GTCGCTCTAGCCATGATCGA+AGG | 0.616148 | 5.3:-2381261 | None:intergenic |
| GGCCCCTTTGAATTATGGAG+AGG | 0.617640 | 5.3:+2382833 | MS.gene024777:CDS |
| ATCAGTTTCATATCCCTGGT+GGG | 0.620386 | 5.3:+2382748 | MS.gene024777:CDS |
| ATGAGGTTGAAGACATATGC+TGG | 0.621421 | 5.3:+2379372 | MS.gene024777:CDS |
| GGTCAAACCGAGCTTAGCAG+TGG | 0.626933 | 5.3:+2381585 | MS.gene024777:CDS |
| GCCAAGAGAAGTGTTGATGA+CGG | 0.627322 | 5.3:+2383082 | MS.gene024777:CDS |
| TTGCAACTGATAATTTGAGT+CGG | 0.631698 | 5.3:+2381610 | MS.gene024777:CDS |
| TTGTGTAGAGGAACATGATG+AGG | 0.632219 | 5.3:+2379355 | None:intergenic |
| ACAATGCCGTGACCATCGCA+AGG | 0.632907 | 5.3:-2379677 | None:intergenic |
| AGAAAATGGAAGTGTCCCGT+TGG | 0.633336 | 5.3:-2382792 | None:intergenic |
| GTACCGTACAAAAGAAGTTG+CGG | 0.642566 | 5.3:-2381700 | None:intergenic |
| ATTCTTGGGTAATCTTCGAG+AGG | 0.645712 | 5.3:+2379560 | MS.gene024777:CDS |
| GCTTAATGAGCAATCATGGA+GGG | 0.653113 | 5.3:+2379596 | MS.gene024777:CDS |
| TGAAGCATTTGATACAAACA+TGG | 0.654649 | 5.3:+2379847 | MS.gene024777:CDS |
| ACTGGTAAATTCAGCAACCG+GGG | 0.673635 | 5.3:-2382682 | None:intergenic |
| AATGGAACAACTGTTGCTGG+AGG | 0.675922 | 5.3:+2381328 | MS.gene024777:CDS |
| AGTGCAGCAAGTCCCTAACA+AGG | 0.676461 | 5.3:-2380597 | None:intergenic |
| GGCTTAATGAGCAATCATGG+AGG | 0.679748 | 5.3:+2379595 | MS.gene024777:CDS |
| TAATGAGCAATCATGGAGGG+AGG | 0.688793 | 5.3:+2379599 | MS.gene024777:CDS |
| GCACCATTATCAGAAAGCAG+AGG | 0.712334 | 5.3:+2383106 | MS.gene024777:CDS |
| GTACATTTATTGGCCCACCA+GGG | 0.713685 | 5.3:-2382761 | None:intergenic |
| TCAAACCGAGCTTAGCAGTG+GGG | 0.718156 | 5.3:+2381587 | MS.gene024777:CDS |
| CCCCTCTCCATAATTCAAAG+GGG | 0.721782 | 5.3:-2382835 | None:intergenic |
| CTGGTAAATTCAGCAACCGG+GGG | 0.723020 | 5.3:-2382681 | None:intergenic |
| GCAGCCAAGAAACTGATATG+CGG | 0.738645 | 5.3:+2381217 | MS.gene024777:CDS |
| CGTACAAAAGAAGTTGCGGG+AGG | 0.739850 | 5.3:-2381696 | None:intergenic |
| ACAGAATCTGCAGAGCACAG+AGG | 0.760547 | 5.3:+2383060 | MS.gene024777:CDS |
| GGATAATTAGTGTACCCAGG+AGG | 0.762660 | 5.3:-2382660 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCTTATTCATTTTATTT+TGG | + | chr5.3:2380848-2380867 | MS.gene024777:intron | 10.0% |
| !! | AGTAGAAAATAAATAATCTT+AGG | - | chr5.3:2382313-2382332 | None:intergenic | 15.0% |
| !! | TGTGTAAATACAAATAAAAT+AGG | - | chr5.3:2380387-2380406 | None:intergenic | 15.0% |
| !! | TTCATAATTAAAAATGAACT+GGG | + | chr5.3:2380010-2380029 | MS.gene024777:intron | 15.0% |
| !! | TTTCATAATTAAAAATGAAC+TGG | + | chr5.3:2380009-2380028 | MS.gene024777:intron | 15.0% |
| !! | AAAAAATAAGCAAATCCAAT+AGG | - | chr5.3:2381750-2381769 | None:intergenic | 20.0% |
| !! | AAAAATAAGCAAATCCAATA+GGG | - | chr5.3:2381749-2381768 | None:intergenic | 20.0% |
| !! | AAAAGATACAATTCGAATAT+GGG | - | chr5.3:2379781-2379800 | None:intergenic | 20.0% |
| !! | AAAATGAAGTAAAATATGAG+AGG | - | chr5.3:2382229-2382248 | None:intergenic | 20.0% |
| !! | AAATAATACTATCAGCAATT+AGG | - | chr5.3:2380143-2380162 | None:intergenic | 20.0% |
| !! | AATAATACTATCAGCAATTA+GGG | - | chr5.3:2380142-2380161 | None:intergenic | 20.0% |
| !! | TAAAAGATACAATTCGAATA+TGG | - | chr5.3:2379782-2379801 | None:intergenic | 20.0% |
| !!! | AAGCATGTAATTTTAATCTT+AGG | + | chr5.3:2382278-2382297 | MS.gene024777:intron | 20.0% |
| !!! | AGCATGTAATTTTAATCTTA+GGG | + | chr5.3:2382279-2382298 | MS.gene024777:intron | 20.0% |
| !!! | ATGTATGAATTTTCACATAA+TGG | + | chr5.3:2379983-2380002 | MS.gene024777:intron | 20.0% |
| !!! | ATTCGAATTGTATCTTTTAT+GGG | + | chr5.3:2379783-2379802 | MS.gene024777:CDS | 20.0% |
| !!! | GTTTTAATACCAAGTAATTA+TGG | + | chr5.3:2382617-2382636 | MS.gene024777:intron | 20.0% |
| !!! | TATTCGAATTGTATCTTTTA+TGG | + | chr5.3:2379782-2379801 | MS.gene024777:CDS | 20.0% |
| ! | ACATACAGTAATATGATTCA+CGG | - | chr5.3:2380217-2380236 | None:intergenic | 25.0% |
| ! | AGATTTACTCATTTAACCAT+TGG | + | chr5.3:2380738-2380757 | MS.gene024777:intron | 25.0% |
| ! | ATAATACTATCAGCAATTAG+GGG | - | chr5.3:2380141-2380160 | None:intergenic | 25.0% |
| ! | ATTTCATTAGTTCCAAAAGA+AGG | - | chr5.3:2381969-2381988 | None:intergenic | 25.0% |
| ! | GATTTACTCATTTAACCATT+GGG | + | chr5.3:2380739-2380758 | MS.gene024777:intron | 25.0% |
| ! | TAAAAAAGATAACTAGTGGA+AGG | - | chr5.3:2380891-2380910 | None:intergenic | 25.0% |
| ! | TAAAAATAGTAATCGCAAAG+AGG | - | chr5.3:2379635-2379654 | None:intergenic | 25.0% |
| ! | TAGGTAAAAAAGATAACTAG+TGG | - | chr5.3:2380895-2380914 | None:intergenic | 25.0% |
| ! | TATCAATTTACGTAATACCT+AGG | + | chr5.3:2380304-2380323 | MS.gene024777:intron | 25.0% |
| ! | TGAAAATTCATACATCAACA+TGG | - | chr5.3:2379978-2379997 | None:intergenic | 25.0% |
| ! | TTACACATCTGTTTACTATT+CGG | + | chr5.3:2380400-2380419 | MS.gene024777:intron | 25.0% |
| ! | TTCTTTATACTTGAGTGTTT+GGG | + | chr5.3:2380430-2380449 | MS.gene024777:intron | 25.0% |
| ! | TTTCATTAGTTCCAAAAGAA+GGG | - | chr5.3:2381968-2381987 | None:intergenic | 25.0% |
| !! | TGCACTTAAAATCTAGTTTA+CGG | + | chr5.3:2380763-2380782 | MS.gene024777:intron | 25.0% |
| !! | TTGCTTTGTCAATTTAACTT+GGG | + | chr5.3:2381544-2381563 | MS.gene024777:intron | 25.0% |
| !!! | ACTAACTAAAAAGGTATTCT+TGG | + | chr5.3:2379545-2379564 | MS.gene024777:CDS | 25.0% |
| !!! | ACTGACAAGTTTTATGAATA+CGG | - | chr5.3:2381426-2381445 | None:intergenic | 25.0% |
| !!! | ATTGAATTGATGTCATTTTC+AGG | + | chr5.3:2381464-2381483 | MS.gene024777:intron | 25.0% |
| !!! | CAATATCAACAGTGTTTTTT+TGG | + | chr5.3:2380038-2380057 | MS.gene024777:intron | 25.0% |
| !!! | CTAACTAAAAAGGTATTCTT+GGG | + | chr5.3:2379546-2379565 | MS.gene024777:CDS | 25.0% |
| !!! | TAAAGCAAAGCAACATTTTT+TGG | + | chr5.3:2382524-2382543 | MS.gene024777:intron | 25.0% |
| !!! | TCTTTGCGATTACTATTTTT+AGG | + | chr5.3:2379634-2379653 | MS.gene024777:CDS | 25.0% |
| !!! | TTTGAATTGCATATTTTGAG+TGG | + | chr5.3:2382963-2382982 | MS.gene024777:intron | 25.0% |
| AAATGCTATCAAGAAGAAGA+AGG | - | chr5.3:2379812-2379831 | None:intergenic | 30.0% | |
| AATTCGAATATGGGATAATG+TGG | - | chr5.3:2379772-2379791 | None:intergenic | 30.0% | |
| AATTCTACAACAACAGATTG+AGG | + | chr5.3:2382908-2382927 | MS.gene024777:CDS | 30.0% | |
| ACGTAATTGACAATGATACT+TGG | + | chr5.3:2380786-2380805 | MS.gene024777:intron | 30.0% | |
| AGTTGATCTATCAGAAACTA+TGG | + | chr5.3:2380924-2380943 | MS.gene024777:intron | 30.0% | |
| ATACAGTAATATGATTCACG+GGG | - | chr5.3:2380215-2380234 | None:intergenic | 30.0% | |
| ATACTCTTCAGAATAGTTCT+CGG | + | chr5.3:2382192-2382211 | MS.gene024777:intron | 30.0% | |
| CATACAGTAATATGATTCAC+GGG | - | chr5.3:2380216-2380235 | None:intergenic | 30.0% | |
| CGTAATTGACAATGATACTT+GGG | + | chr5.3:2380787-2380806 | MS.gene024777:intron | 30.0% | |
| CTTCAAAAACTTTCTCGAAA+AGG | - | chr5.3:2382410-2382429 | None:intergenic | 30.0% | |
| CTTGCTTTGTCAATTTAACT+TGG | + | chr5.3:2381543-2381562 | MS.gene024777:intron | 30.0% | |
| GAGAAAAAGCCATAATTACT+TGG | - | chr5.3:2382629-2382648 | None:intergenic | 30.0% | |
| GTAAAATATGAGAGGAATTC+CGG | - | chr5.3:2382221-2382240 | None:intergenic | 30.0% | |
| GTAATTGACAATGATACTTG+GGG | + | chr5.3:2380788-2380807 | MS.gene024777:intron | 30.0% | |
| GTTCTTTATACTTGAGTGTT+TGG | + | chr5.3:2380429-2380448 | MS.gene024777:intron | 30.0% | |
| TAGGAGGAAAAGAAATAAGA+AGG | - | chr5.3:2379910-2379929 | None:intergenic | 30.0% | |
| TATGTGGCAACTAACTAAAA+AGG | + | chr5.3:2379536-2379555 | MS.gene024777:CDS | 30.0% | |
| TCAAAAATAGCCAATCCAAA+CGG | + | chr5.3:2381933-2381952 | MS.gene024777:intron | 30.0% | |
| TGCAGAATCTGTTTAAAAGT+GGG | - | chr5.3:2383031-2383050 | None:intergenic | 30.0% | |
| TGGTTATTATGTGTGTTATG+TGG | + | chr5.3:2379520-2379539 | MS.gene024777:CDS | 30.0% | |
| TGTTAATTAAGGCTTTGCAT+TGG | + | chr5.3:2379700-2379719 | MS.gene024777:CDS | 30.0% | |
| TTGCAACTGATAATTTGAGT+CGG | + | chr5.3:2381610-2381629 | MS.gene024777:CDS | 30.0% | |
| TTGCAGAATCTGTTTAAAAG+TGG | - | chr5.3:2383032-2383051 | None:intergenic | 30.0% | |
| ! | TAGATCAACTTCAAGTTAGT+AGG | - | chr5.3:2380914-2380933 | None:intergenic | 30.0% |
| ! | TGAAGCATTTGATACAAACA+TGG | + | chr5.3:2379847-2379866 | MS.gene024777:CDS | 30.0% |
| ! | TTTTAGCAAACATGTGAACT+AGG | - | chr5.3:2382493-2382512 | None:intergenic | 30.0% |
| !! | ATTCTGAAGAGTATTACACA+AGG | - | chr5.3:2382186-2382205 | None:intergenic | 30.0% |
| !! | CTTTTCGAGAAAGTTTTTGA+AGG | + | chr5.3:2382408-2382427 | MS.gene024777:intron | 30.0% |
| !! | TTCTTATTTCTTTTCCTCCT+AGG | + | chr5.3:2379909-2379928 | MS.gene024777:intron | 30.0% |
| !! | TTGTCAATTTAACTTGGGAT+AGG | + | chr5.3:2381549-2381568 | MS.gene024777:intron | 30.0% |
| !! | TTTACCAGTGTTGATCTTAA+TGG | + | chr5.3:2382696-2382715 | MS.gene024777:CDS | 30.0% |
| !!! | AACAGTGTTTTTTTGGCATA+GGG | + | chr5.3:2380045-2380064 | MS.gene024777:intron | 30.0% |
| AAATATCTCAAAGTCTCAGC+TGG | + | chr5.3:2382872-2382891 | MS.gene024777:CDS | 35.0% | |
| AATCTGTTTAAAAGTGGGAG+AGG | - | chr5.3:2383026-2383045 | None:intergenic | 35.0% | |
| AGTTCCAAAAGAAGGGATAT+TGG | - | chr5.3:2381961-2381980 | None:intergenic | 35.0% | |
| AGTTCCAAACAAAGGGATAT+TGG | - | chr5.3:2382066-2382085 | None:intergenic | 35.0% | |
| ATAAATAATCTTAGGCCGTC+AGG | - | chr5.3:2382305-2382324 | None:intergenic | 35.0% | |
| ATACATCAACATGGCTTAGT+TGG | - | chr5.3:2379969-2379988 | None:intergenic | 35.0% | |
| ATCTGTTTAAAAGTGGGAGA+GGG | - | chr5.3:2383025-2383044 | None:intergenic | 35.0% | |
| CAAAAATAGCCAATCCAAAC+GGG | + | chr5.3:2381934-2381953 | MS.gene024777:intron | 35.0% | |
| CAAAATCAGTTTCATATCCC+TGG | + | chr5.3:2382744-2382763 | MS.gene024777:CDS | 35.0% | |
| CATAAGCAGTTCCAAACAAA+GGG | - | chr5.3:2382073-2382092 | None:intergenic | 35.0% | |
| CTATGTCACTGACATACTTA+TGG | + | chr5.3:2380531-2380550 | MS.gene024777:CDS | 35.0% | |
| CTTGTCAGTAATATGCAAGA+TGG | + | chr5.3:2381437-2381456 | MS.gene024777:intron | 35.0% | |
| GAAAGCAAAGAACAGTGAAA+CGG | - | chr5.3:2379880-2379899 | None:intergenic | 35.0% | |
| GAAGGCAATGAACATGAAAA+AGG | - | chr5.3:2381246-2381265 | None:intergenic | 35.0% | |
| GATAATCACTCACTGTATGT+AGG | + | chr5.3:2381399-2381418 | MS.gene024777:intron | 35.0% | |
| GTTCCAAAAGAAGGGATATT+GGG | - | chr5.3:2381960-2381979 | None:intergenic | 35.0% | |
| GTTCCAAACAAAGGGATATT+GGG | - | chr5.3:2382065-2382084 | None:intergenic | 35.0% | |
| TACATCAACATGGCTTAGTT+GGG | - | chr5.3:2379968-2379987 | None:intergenic | 35.0% | |
| TACCATGCATTTAACAGTAG+AGG | + | chr5.3:2379426-2379445 | MS.gene024777:CDS | 35.0% | |
| TCATAAGCAGTTCCAAACAA+AGG | - | chr5.3:2382074-2382093 | None:intergenic | 35.0% | |
| TGATCTAACTACCTAAAGCT+AGG | + | chr5.3:2382124-2382143 | MS.gene024777:intron | 35.0% | |
| TTCAACTTCCAAGATCAGTT+TGG | + | chr5.3:2379476-2379495 | MS.gene024777:CDS | 35.0% | |
| TTCTCCATTAAGATCAACAC+TGG | - | chr5.3:2382703-2382722 | None:intergenic | 35.0% | |
| TTTGTACTATGCATGCTATC+TGG | + | chr5.3:2380352-2380371 | MS.gene024777:intron | 35.0% | |
| ! | AAAGAAGAAGCACAGATACA+TGG | - | chr5.3:2380626-2380645 | None:intergenic | 35.0% |
| ! | AACAGTTGTTCCATTTTCTG+GGG | - | chr5.3:2381323-2381342 | None:intergenic | 35.0% |
| ! | AATTAAGGCTTTGCATTGGT+TGG | + | chr5.3:2379704-2379723 | MS.gene024777:CDS | 35.0% |
| ! | ATTTTACCTCGACCTTGTTA+GGG | + | chr5.3:2380585-2380604 | MS.gene024777:CDS | 35.0% |
| ! | CAACAGTTGTTCCATTTTCT+GGG | - | chr5.3:2381324-2381343 | None:intergenic | 35.0% |
| ! | CACGGCATTGTTGTTAATTA+AGG | + | chr5.3:2379689-2379708 | MS.gene024777:CDS | 35.0% |
| ! | TATACTCTATGCCTAGCTTT+AGG | - | chr5.3:2382138-2382157 | None:intergenic | 35.0% |
| ! | TCTTAGTTTGATGGCAACTT+TGG | + | chr5.3:2379395-2379414 | MS.gene024777:CDS | 35.0% |
| ! | TTGGTGCTTCTTCTTAACAT+GGG | + | chr5.3:2379495-2379514 | MS.gene024777:CDS | 35.0% |
| !! | AGATTTTAAGTGCAACCCAA+TGG | - | chr5.3:2380757-2380776 | None:intergenic | 35.0% |
| !! | AGCTGAGACTTTGAGATATT+TGG | - | chr5.3:2382873-2382892 | None:intergenic | 35.0% |
| !! | ATATGCTGGTCTTAGTTTGA+TGG | + | chr5.3:2379386-2379405 | MS.gene024777:CDS | 35.0% |
| !! | ATTTTAATCTTAGGGCCTGA+CGG | + | chr5.3:2382287-2382306 | MS.gene024777:intron | 35.0% |
| !! | TTTGGTGCTTCTTCTTAACA+TGG | + | chr5.3:2379494-2379513 | MS.gene024777:CDS | 35.0% |
| !!! | CAACAGTGTTTTTTTGGCAT+AGG | + | chr5.3:2380044-2380063 | MS.gene024777:intron | 35.0% |
| !!! | TGCGATTACTATTTTTAGGC+AGG | + | chr5.3:2379638-2379657 | MS.gene024777:CDS | 35.0% |
| AAATGTACCCTTTCCTCCAA+CGG | + | chr5.3:2382776-2382795 | MS.gene024777:CDS | 40.0% | |
| AACCCCTCTCCATAATTCAA+AGG | - | chr5.3:2382840-2382859 | None:intergenic | 40.0% | |
| AATCAGTTTCATATCCCTGG+TGG | + | chr5.3:2382747-2382766 | MS.gene024777:CDS | 40.0% | |
| AATTCCCTTGCACCTAATAC+GGG | + | chr5.3:2380947-2380966 | MS.gene024777:CDS | 40.0% | |
| ACACTGGTAAATTCAGCAAC+CGG | - | chr5.3:2382687-2382706 | None:intergenic | 40.0% | |
| ACCCCTCTCCATAATTCAAA+GGG | - | chr5.3:2382839-2382858 | None:intergenic | 40.0% | |
| AGAGGCTTAATGAGCAATCA+TGG | + | chr5.3:2379592-2379611 | MS.gene024777:CDS | 40.0% | |
| AGTATGAGCAACTCATCAGT+AGG | - | chr5.3:2379937-2379956 | None:intergenic | 40.0% | |
| ATCAGTTTCATATCCCTGGT+GGG | + | chr5.3:2382748-2382767 | MS.gene024777:CDS | 40.0% | |
| ATGAAATCTGTGCTATGCTG+TGG | + | chr5.3:2382090-2382109 | MS.gene024777:intron | 40.0% | |
| ATGAGGTTGAAGACATATGC+TGG | + | chr5.3:2379372-2379391 | MS.gene024777:CDS | 40.0% | |
| ATGGTTGGGAAGGAAGAAAA+TGG | - | chr5.3:2382809-2382828 | None:intergenic | 40.0% | |
| ATGTTCATTGCCTTCGATCA+TGG | + | chr5.3:2381251-2381270 | MS.gene024777:CDS | 40.0% | |
| ATTCTTGGGTAATCTTCGAG+AGG | + | chr5.3:2379560-2379579 | MS.gene024777:CDS | 40.0% | |
| CAATCAGTTGGTCATCAACA+TGG | + | chr5.3:2381364-2381383 | MS.gene024777:CDS | 40.0% | |
| CGTAATACCTAGGCAGATTA+TGG | + | chr5.3:2380314-2380333 | MS.gene024777:intron | 40.0% | |
| CTCAAATTTACAGACCTCCT+GGG | + | chr5.3:2382646-2382665 | MS.gene024777:intron | 40.0% | |
| GAAAATGGAACAACTGTTGC+TGG | + | chr5.3:2381325-2381344 | MS.gene024777:CDS | 40.0% | |
| GAATTCCCTTGCACCTAATA+CGG | + | chr5.3:2380946-2380965 | MS.gene024777:CDS | 40.0% | |
| GCATTTGATACAAACATGGC+AGG | + | chr5.3:2379851-2379870 | MS.gene024777:CDS | 40.0% | |
| GCTTAATGAGCAATCATGGA+GGG | + | chr5.3:2379596-2379615 | MS.gene024777:CDS | 40.0% | |
| GCTTCTTCTTAACATGGGTT+TGG | + | chr5.3:2379500-2379519 | MS.gene024777:CDS | 40.0% | |
| GTACCGTACAAAAGAAGTTG+CGG | - | chr5.3:2381703-2381722 | None:intergenic | 40.0% | |
| GTCACTGACATACTTATGGA+GGG | + | chr5.3:2380535-2380554 | MS.gene024777:CDS | 40.0% | |
| GTTGAAAGATACACCATTGC+CGG | - | chr5.3:2379462-2379481 | None:intergenic | 40.0% | |
| TAATTCAAAGGGGCCATGTA+TGG | - | chr5.3:2382828-2382847 | None:intergenic | 40.0% | |
| TACATGGCCCCTTTGAATTA+TGG | + | chr5.3:2382828-2382847 | MS.gene024777:CDS | 40.0% | |
| TACCGTACAAAAGAAGTTGC+GGG | - | chr5.3:2381702-2381721 | None:intergenic | 40.0% | |
| TACGGTACGGTGTTTATGTT+CGG | + | chr5.3:2381715-2381734 | MS.gene024777:intron | 40.0% | |
| TAGCAAACATGTGAACTAGG+CGG | - | chr5.3:2382490-2382509 | None:intergenic | 40.0% | |
| TAGTACAAATGCTTTCCCTG+TGG | - | chr5.3:2380341-2380360 | None:intergenic | 40.0% | |
| TCGAGGTAAAATGTGAAGAC+TGG | - | chr5.3:2380577-2380596 | None:intergenic | 40.0% | |
| TCTCAAATTTACAGACCTCC+TGG | + | chr5.3:2382645-2382664 | MS.gene024777:intron | 40.0% | |
| TCTGTTTAAAAGTGGGAGAG+GGG | - | chr5.3:2383024-2383043 | None:intergenic | 40.0% | |
| TCTTCTTCGGAGATTCAAGA+TGG | + | chr5.3:2383139-2383158 | MS.gene024777:CDS | 40.0% | |
| TGTCACTGACATACTTATGG+AGG | + | chr5.3:2380534-2380553 | MS.gene024777:CDS | 40.0% | |
| TTGAAGGATTGAGTATGCTC+TGG | + | chr5.3:2382424-2382443 | MS.gene024777:intron | 40.0% | |
| TTGCCTCTGCTTTCTGATAA+TGG | - | chr5.3:2383112-2383131 | None:intergenic | 40.0% | |
| ! | ACAGTTGTTCCATTTTCTGG+GGG | - | chr5.3:2381322-2381341 | None:intergenic | 40.0% |
| ! | CATTTTACCTCGACCTTGTT+AGG | + | chr5.3:2380584-2380603 | MS.gene024777:CDS | 40.0% |
| ! | GCAACAGTTGTTCCATTTTC+TGG | - | chr5.3:2381325-2381344 | None:intergenic | 40.0% |
| ! | GCAACTTCTTTTGTACGGTA+CGG | + | chr5.3:2381702-2381721 | MS.gene024777:intron | 40.0% |
| ! | GGAGGAAAGGGTACATTTAT+TGG | - | chr5.3:2382774-2382793 | None:intergenic | 40.0% |
| !! | AAGAAGCACCAAACTGATCT+TGG | - | chr5.3:2379487-2379506 | None:intergenic | 40.0% |
| !! | AAGCTCTCTGTTTCTATCTC+AGG | + | chr5.3:2380458-2380477 | MS.gene024777:intron | 40.0% |
| !! | ATTTAACTTGGGATAGGCAC+TGG | + | chr5.3:2381555-2381574 | MS.gene024777:intron | 40.0% |
| !! | CTGATTTTGTGCTTGTTGAC+TGG | - | chr5.3:2382733-2382752 | None:intergenic | 40.0% |
| AATGGAACAACTGTTGCTGG+AGG | + | chr5.3:2381328-2381347 | MS.gene024777:CDS | 45.0% | |
| AATGTACCCTTTCCTCCAAC+GGG | + | chr5.3:2382777-2382796 | MS.gene024777:CDS | 45.0% | |
| ACACCATTGCCGGATAAAAC+TGG | - | chr5.3:2379452-2379471 | None:intergenic | 45.0% | |
| ACATACTTATGGAGGGACAG+TGG | + | chr5.3:2380542-2380561 | MS.gene024777:CDS | 45.0% | |
| ACTGGTAAATTCAGCAACCG+GGG | - | chr5.3:2382685-2382704 | None:intergenic | 45.0% | |
| AGGCATAGAGTATAGCACCA+AGG | + | chr5.3:2382144-2382163 | MS.gene024777:intron | 45.0% | |
| CACAAGGCTCTCATATGAAC+AGG | - | chr5.3:2382170-2382189 | None:intergenic | 45.0% | |
| CACTGGTAAATTCAGCAACC+GGG | - | chr5.3:2382686-2382705 | None:intergenic | 45.0% | |
| CAGCAAGGATCACAATCAGT+TGG | + | chr5.3:2381352-2381371 | MS.gene024777:CDS | 45.0% | |
| CATACTTATGGAGGGACAGT+GGG | + | chr5.3:2380543-2380562 | MS.gene024777:CDS | 45.0% | |
| CCCCTCTCCATAATTCAAAG+GGG | - | chr5.3:2382838-2382857 | None:intergenic | 45.0% | |
| CCCCTTTGAATTATGGAGAG+GGG | + | chr5.3:2382835-2382854 | MS.gene024777:CDS | 45.0% | |
| CTCAGTTACATTCCTTGCGA+TGG | + | chr5.3:2379665-2379684 | MS.gene024777:CDS | 45.0% | |
| GCACCATTATCAGAAAGCAG+AGG | + | chr5.3:2383106-2383125 | MS.gene024777:CDS | 45.0% | |
| GCAGCCAAGAAACTGATATG+CGG | + | chr5.3:2381217-2381236 | MS.gene024777:CDS | 45.0% | |
| GCCCCTTTGAATTATGGAGA+GGG | + | chr5.3:2382834-2382853 | MS.gene024777:CDS | 45.0% | |
| GGATAATTAGTGTACCCAGG+AGG | - | chr5.3:2382663-2382682 | None:intergenic | 45.0% | |
| GGCCTCTACTGTTAAATGCA+TGG | - | chr5.3:2379431-2379450 | None:intergenic | 45.0% | |
| GGCTTAATGAGCAATCATGG+AGG | + | chr5.3:2379595-2379614 | MS.gene024777:CDS | 45.0% | |
| GGGAGCTATACGAGACATTT+AGG | + | chr5.3:2380967-2380986 | MS.gene024777:CDS | 45.0% | |
| GGGGTCTAACATGTAATGTC+TGG | - | chr5.3:2380196-2380215 | None:intergenic | 45.0% | |
| GTACATTTATTGGCCCACCA+GGG | - | chr5.3:2382764-2382783 | None:intergenic | 45.0% | |
| GTGTCCGCATATCAGTTTCT+TGG | - | chr5.3:2381224-2381243 | None:intergenic | 45.0% | |
| TAATGAGCAATCATGGAGGG+AGG | + | chr5.3:2379599-2379618 | MS.gene024777:CDS | 45.0% | |
| TAATGTGGTCACTGTAGGAG+TGG | - | chr5.3:2379757-2379776 | None:intergenic | 45.0% | |
| TACATTCCTTGCGATGGTCA+CGG | + | chr5.3:2379671-2379690 | MS.gene024777:CDS | 45.0% | |
| TAGGCAGATTATGGACCACA+GGG | + | chr5.3:2380323-2380342 | MS.gene024777:intron | 45.0% | |
| TCAGAATAGTTCTCGGTCTC+CGG | + | chr5.3:2382199-2382218 | MS.gene024777:intron | 45.0% | |
| TCTCGTATAGCTCCCGTATT+AGG | - | chr5.3:2380962-2380981 | None:intergenic | 45.0% | |
| TCTTCCTTCCCAACCATACA+TGG | + | chr5.3:2382812-2382831 | MS.gene024777:CDS | 45.0% | |
| TGGGATAATGTGGTCACTGT+AGG | - | chr5.3:2379762-2379781 | None:intergenic | 45.0% | |
| TGGGTACACTAATTATCCCC+CGG | + | chr5.3:2382665-2382684 | MS.gene024777:CDS | 45.0% | |
| TTGGTTGTACCCCCAGAAAA+TGG | + | chr5.3:2381310-2381329 | MS.gene024777:CDS | 45.0% | |
| ! | AGGCAAGCTTAGCTCTTCTT+CGG | + | chr5.3:2383126-2383145 | MS.gene024777:CDS | 45.0% |
| ! | CTCCCGCAACTTCTTTTGTA+CGG | + | chr5.3:2381697-2381716 | MS.gene024777:CDS | 45.0% |
| !! | AGAAAATGGAAGTGTCCCGT+TGG | - | chr5.3:2382795-2382814 | None:intergenic | 45.0% |
| !! | ATTTTCTGGGGGTACAACCA+AGG | - | chr5.3:2381311-2381330 | None:intergenic | 45.0% |
| !! | CAGTAGAGGCCAGTTTTATC+CGG | + | chr5.3:2379440-2379459 | MS.gene024777:CDS | 45.0% |
| !! | GCCAAGAGAAGTGTTGATGA+CGG | + | chr5.3:2383082-2383101 | MS.gene024777:CDS | 45.0% |
| !!! | AATTTTACATATTTTTTAAA+TGG | + | chr5.3:2381146-2381165 | MS.gene024777:intron | 5.0% |
| AAAGGGATATTGGGCCCGTT+TGG | - | chr5.3:2382056-2382075 | None:intergenic | 50.0% | |
| AAGTGTCCCGTTGGAGGAAA+GGG | - | chr5.3:2382786-2382805 | None:intergenic | 50.0% | |
| AATCTGTGCTATGCTGTGGC+TGG | + | chr5.3:2382094-2382113 | MS.gene024777:intron | 50.0% | |
| ACAACCAAGGCTCTGCAAGT+AGG | - | chr5.3:2381298-2381317 | None:intergenic | 50.0% | |
| ACAGAATCTGCAGAGCACAG+AGG | + | chr5.3:2383060-2383079 | MS.gene024777:CDS | 50.0% | |
| ACTCACGCATTGAGCTCTTC+AGG | - | chr5.3:2381074-2381093 | None:intergenic | 50.0% | |
| AGCTCCCGTATTAGGTGCAA+GGG | - | chr5.3:2380954-2380973 | None:intergenic | 50.0% | |
| AGTGCAGCAAGTCCCTAACA+AGG | - | chr5.3:2380600-2380619 | None:intergenic | 50.0% | |
| CAAAGGGGCCATGTATGGTT+GGG | - | chr5.3:2382823-2382842 | None:intergenic | 50.0% | |
| CAACCAAGGCTCTGCAAGTA+GGG | - | chr5.3:2381297-2381316 | None:intergenic | 50.0% | |
| CAACTCATCAGTAGGAGCCT+AGG | - | chr5.3:2379929-2379948 | None:intergenic | 50.0% | |
| CGGTGTTTATGTTCGGTCGT+TGG | + | chr5.3:2381722-2381741 | MS.gene024777:intron | 50.0% | |
| CGTACAAAAGAAGTTGCGGG+AGG | - | chr5.3:2381699-2381718 | None:intergenic | 50.0% | |
| CTAGGCAGATTATGGACCAC+AGG | + | chr5.3:2380322-2380341 | MS.gene024777:intron | 50.0% | |
| CTCACGCATTGAGCTCTTCA+GGG | - | chr5.3:2381073-2381092 | None:intergenic | 50.0% | |
| CTGGTAAATTCAGCAACCGG+GGG | - | chr5.3:2382684-2382703 | None:intergenic | 50.0% | |
| CTGTGGTCCATAATCTGCCT+AGG | - | chr5.3:2380324-2380343 | None:intergenic | 50.0% | |
| GATATTGGGCCCGTTTGGAT+TGG | - | chr5.3:2381946-2381965 | None:intergenic | 50.0% | |
| GCAATCATGGAGGGAGGTTA+TGG | + | chr5.3:2379605-2379624 | MS.gene024777:CDS | 50.0% | |
| GCCGTCATCAACACTTCTCT+TGG | - | chr5.3:2383086-2383105 | None:intergenic | 50.0% | |
| GCTCTCATATGAACAGGCCT+TGG | - | chr5.3:2382164-2382183 | None:intergenic | 50.0% | |
| GGCCCCTTTGAATTATGGAG+AGG | + | chr5.3:2382833-2382852 | MS.gene024777:CDS | 50.0% | |
| GGGCCCAATATCCCTTTGTT+TGG | + | chr5.3:2382059-2382078 | MS.gene024777:intron | 50.0% | |
| GGGGGATAATTAGTGTACCC+AGG | - | chr5.3:2382666-2382685 | None:intergenic | 50.0% | |
| GGTACATTTATTGGCCCACC+AGG | - | chr5.3:2382765-2382784 | None:intergenic | 50.0% | |
| GTCAAACCGAGCTTAGCAGT+GGG | + | chr5.3:2381586-2381605 | MS.gene024777:CDS | 50.0% | |
| TAGCTCCCGTATTAGGTGCA+AGG | - | chr5.3:2380955-2380974 | None:intergenic | 50.0% | |
| TCAAACCGAGCTTAGCAGTG+GGG | + | chr5.3:2381587-2381606 | MS.gene024777:CDS | 50.0% | |
| TCAAAGGGGCCATGTATGGT+TGG | - | chr5.3:2382824-2382843 | None:intergenic | 50.0% | |
| TCACGCATTGAGCTCTTCAG+GGG | - | chr5.3:2381072-2381091 | None:intergenic | 50.0% | |
| ! | GGGCCCAATATCCCTTCTTT+TGG | + | chr5.3:2381954-2381973 | MS.gene024777:intron | 50.0% |
| !! | AAATGGAAGTGTCCCGTTGG+AGG | - | chr5.3:2382792-2382811 | None:intergenic | 50.0% |
| !! | AGGCCAGTTTTATCCGGCAA+TGG | + | chr5.3:2379446-2379465 | MS.gene024777:CDS | 50.0% |
| ACAATGCCGTGACCATCGCA+AGG | - | chr5.3:2379680-2379699 | None:intergenic | 55.0% | |
| ACTGTTGCTGGAGGTCAGCA+AGG | + | chr5.3:2381337-2381356 | MS.gene024777:CDS | 55.0% | |
| AGCTCTTCAGGGGTTGCTTC+TGG | - | chr5.3:2381062-2381081 | None:intergenic | 55.0% | |
| CTCATCAGTAGGAGCCTAGG+AGG | - | chr5.3:2379926-2379945 | None:intergenic | 55.0% | |
| GAAGGGATATTGGGCCCGTT+TGG | - | chr5.3:2381951-2381970 | None:intergenic | 55.0% | |
| GCAAGTCCCTAACAAGGTCG+AGG | - | chr5.3:2380594-2380613 | None:intergenic | 55.0% | |
| GGGTAATCTTCGAGAGGCTG+AGG | + | chr5.3:2379566-2379585 | MS.gene024777:CDS | 55.0% | |
| GGTCAAACCGAGCTTAGCAG+TGG | + | chr5.3:2381585-2381604 | MS.gene024777:CDS | 55.0% | |
| GTCGCTCTAGCCATGATCGA+AGG | - | chr5.3:2381264-2381283 | None:intergenic | 55.0% | |
| GTTCGGTCGTTGGACCCTAT+TGG | + | chr5.3:2381732-2381751 | MS.gene024777:intron | 55.0% | |
| TGCAACCCCACTGCTAAGCT+CGG | - | chr5.3:2381595-2381614 | None:intergenic | 55.0% | |
| TTCGAGAGGCTGAGGTTGAG+AGG | + | chr5.3:2379574-2379593 | MS.gene024777:CDS | 55.0% | |
| TTGCCCTACTTGCAGAGCCT+TGG | + | chr5.3:2381291-2381310 | MS.gene024777:CDS | 55.0% | |
| ! | GAAGTGTCCCGTTGGAGGAA+AGG | - | chr5.3:2382787-2382806 | None:intergenic | 55.0% |
| !! | GGGATAGGCACTGGAAGTAC+AGG | + | chr5.3:2381564-2381583 | MS.gene024777:intron | 55.0% |
| AAGCTGCAGCAGCAGCTGCT+TGG | - | chr5.3:2381650-2381669 | None:intergenic | 60.0% | |
| GGGGCCATGTATGGTTGGGA+AGG | - | chr5.3:2382819-2382838 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 2379369 | 2383171 | 2379369 | ID=MS.gene024777 |
| chr5.3 | mRNA | 2379369 | 2383171 | 2379369 | ID=MS.gene024777.t1;Parent=MS.gene024777 |
| chr5.3 | exon | 2379369 | 2379901 | 2379369 | ID=MS.gene024777.t1.exon1;Parent=MS.gene024777.t1 |
| chr5.3 | CDS | 2379369 | 2379901 | 2379369 | ID=cds.MS.gene024777.t1;Parent=MS.gene024777.t1 |
| chr5.3 | exon | 2380480 | 2380656 | 2380480 | ID=MS.gene024777.t1.exon2;Parent=MS.gene024777.t1 |
| chr5.3 | CDS | 2380480 | 2380656 | 2380480 | ID=cds.MS.gene024777.t1;Parent=MS.gene024777.t1 |
| chr5.3 | exon | 2380938 | 2381087 | 2380938 | ID=MS.gene024777.t1.exon3;Parent=MS.gene024777.t1 |
| chr5.3 | CDS | 2380938 | 2381087 | 2380938 | ID=cds.MS.gene024777.t1;Parent=MS.gene024777.t1 |
| chr5.3 | exon | 2381177 | 2381385 | 2381177 | ID=MS.gene024777.t1.exon4;Parent=MS.gene024777.t1 |
| chr5.3 | CDS | 2381177 | 2381385 | 2381177 | ID=cds.MS.gene024777.t1;Parent=MS.gene024777.t1 |
| chr5.3 | exon | 2381571 | 2381718 | 2381571 | ID=MS.gene024777.t1.exon5;Parent=MS.gene024777.t1 |
| chr5.3 | CDS | 2381571 | 2381718 | 2381571 | ID=cds.MS.gene024777.t1;Parent=MS.gene024777.t1 |
| chr5.3 | exon | 2382659 | 2382929 | 2382659 | ID=MS.gene024777.t1.exon6;Parent=MS.gene024777.t1 |
| chr5.3 | CDS | 2382659 | 2382929 | 2382659 | ID=cds.MS.gene024777.t1;Parent=MS.gene024777.t1 |
| chr5.3 | exon | 2383043 | 2383171 | 2383043 | ID=MS.gene024777.t1.exon7;Parent=MS.gene024777.t1 |
| chr5.3 | CDS | 2383043 | 2383171 | 2383043 | ID=cds.MS.gene024777.t1;Parent=MS.gene024777.t1 |
| Gene Sequence |
| Protein sequence |
