Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025610.t1 | XP_013450132.1 | 94.1 | 874 | 51 | 1 | 1 | 873 | 1 | 874 | 0.00E+00 | 1578.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025610.t1 | A0A072UEC0 | 94.1 | 874 | 51 | 1 | 1 | 873 | 1 | 874 | 0.0e+00 | 1578.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene025610 | MS.gene034823 | PPI |
| MS.gene025610 | MS.gene007170 | PPI |
| MS.gene007170 | MS.gene025610 | PPI |
| MS.gene065719 | MS.gene025610 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025610.t1 | MTR_7g105340 | 94.050 | 874 | 51 | 1 | 1 | 873 | 1 | 874 | 0.0 | 1669 |
| MS.gene025610.t1 | MTR_7g105340 | 93.478 | 828 | 53 | 1 | 1 | 827 | 1 | 828 | 0.0 | 1569 |
| MS.gene025610.t1 | MTR_7g105340 | 94.003 | 767 | 45 | 1 | 1 | 766 | 1 | 767 | 0.0 | 1459 |
| MS.gene025610.t1 | MTR_7g105340 | 93.491 | 676 | 43 | 1 | 1 | 675 | 1 | 676 | 0.0 | 1277 |
| MS.gene025610.t1 | MTR_1g058390 | 65.746 | 905 | 272 | 11 | 1 | 873 | 1 | 899 | 0.0 | 1113 |
| MS.gene025610.t1 | MTR_1g058390 | 68.970 | 825 | 221 | 9 | 80 | 873 | 3 | 823 | 0.0 | 1094 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025610.t1 | AT3G11560 | 55.814 | 817 | 311 | 10 | 79 | 867 | 64 | 858 | 0.0 | 859 |
| MS.gene025610.t1 | AT3G11560 | 55.814 | 817 | 311 | 10 | 79 | 867 | 64 | 858 | 0.0 | 859 |
| MS.gene025610.t1 | AT3G11560 | 55.814 | 817 | 311 | 10 | 79 | 867 | 64 | 858 | 0.0 | 859 |
| MS.gene025610.t1 | AT5G06220 | 51.153 | 911 | 387 | 13 | 1 | 882 | 1 | 882 | 0.0 | 833 |
| MS.gene025610.t1 | AT5G06220 | 50.429 | 932 | 387 | 15 | 1 | 882 | 1 | 907 | 0.0 | 816 |
| MS.gene025610.t1 | AT5G06220 | 47.965 | 909 | 367 | 13 | 1 | 882 | 1 | 830 | 0.0 | 739 |
| MS.gene025610.t1 | AT3G11560 | 57.801 | 564 | 207 | 5 | 79 | 629 | 64 | 609 | 0.0 | 636 |
| MS.gene025610.t1 | AT3G11560 | 57.801 | 564 | 207 | 5 | 79 | 629 | 64 | 609 | 0.0 | 636 |
Find 185 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAAAGATTTAGCAATATT+TGG | 0.120640 | 7.3:-9192094 | MS.gene025610:CDS |
| GAACTATAGGCTTGGCTTAT+AGG | 0.191511 | 7.3:+9192713 | None:intergenic |
| CGGTGGATTTCACTGGATTC+TGG | 0.204838 | 7.3:+9187605 | None:intergenic |
| GTCCACTAGAGGTTGCTTTC+TGG | 0.209871 | 7.3:-9192607 | MS.gene025610:CDS |
| CTGAAGATATCCAACCTTTC+TGG | 0.225744 | 7.3:+9186213 | None:intergenic |
| TACTCAATAAATAGGATATT+TGG | 0.227087 | 7.3:-9186815 | MS.gene025610:intron |
| CTAGCTGCTTTCACATTAGA+AGG | 0.231471 | 7.3:+9191544 | None:intergenic |
| TGGGGAACTGCTTCAGCATT+TGG | 0.255544 | 7.3:+9191631 | None:intergenic |
| AGAGAATTTCTTGTTCATTT+TGG | 0.258156 | 7.3:-9192668 | MS.gene025610:CDS |
| GCCAAGCCTATAGTTCTATT+AGG | 0.269402 | 7.3:-9192706 | MS.gene025610:CDS |
| CAATGCATCATGCTTTGTTT+TGG | 0.286376 | 7.3:-9196207 | MS.gene025610:CDS |
| CACTAGATGTTTGCTCTCAT+TGG | 0.292783 | 7.3:-9191606 | MS.gene025610:CDS |
| TACCTTATAAAATCTTCAAC+TGG | 0.295690 | 7.3:+9192001 | None:intergenic |
| CCAAAGCATACGAGTGGTTT+TGG | 0.298136 | 7.3:-9193124 | MS.gene025610:CDS |
| ATCCAGTTTACTTCGGCTTT+CGG | 0.304846 | 7.3:-9193192 | MS.gene025610:intron |
| TTTGAATAGCGATAATGTTT+TGG | 0.316425 | 7.3:-9196182 | MS.gene025610:CDS |
| TTTGGGTTCTTTATTGCTTT+AGG | 0.320137 | 7.3:-9192076 | MS.gene025610:CDS |
| AAGTGCCATCTTCTCTTTCT+CGG | 0.321573 | 7.3:+9186713 | None:intergenic |
| TCCACTAGAGGTTGCTTTCT+GGG | 0.322241 | 7.3:-9192606 | MS.gene025610:CDS |
| TTTGTCTCTCCCATCACTTT+GGG | 0.325358 | 7.3:+9194946 | None:intergenic |
| GTACAACTGATATGAACTTA+TGG | 0.328813 | 7.3:+9191838 | None:intergenic |
| TATTCTTCCTTTGCACCAAC+TGG | 0.337708 | 7.3:+9189351 | None:intergenic |
| TGGTAGTTTGATGGACTTGC+TGG | 0.341304 | 7.3:-9192747 | MS.gene025610:CDS |
| CTTTGCACCAACTGGATTGT+GGG | 0.344766 | 7.3:+9189359 | None:intergenic |
| GCAGCTAGATATTTGTCAAT+AGG | 0.350504 | 7.3:-9191529 | MS.gene025610:CDS |
| ATTCACTTGCAGCTTGCAAC+AGG | 0.352047 | 7.3:+9194975 | None:intergenic |
| CCAAGCCTATAGTTCTATTA+GGG | 0.356256 | 7.3:-9192705 | MS.gene025610:CDS |
| GAAAGCAGCCTATTCTGTTC+TGG | 0.356848 | 7.3:-9189872 | MS.gene025610:CDS |
| CAGATTCATCGGTAAATCTC+AGG | 0.359385 | 7.3:-9189157 | MS.gene025610:CDS |
| TTCCTACAGGTTACTGCTGT+TGG | 0.360472 | 7.3:-9186404 | MS.gene025610:intron |
| AAACAACATGCTACCTCCTT+TGG | 0.365873 | 7.3:+9194906 | None:intergenic |
| CCAAAACCACTCGTATGCTT+TGG | 0.369198 | 7.3:+9193124 | None:intergenic |
| TGTTACAGGTATCTTATTGT+AGG | 0.370082 | 7.3:-9191890 | MS.gene025610:intron |
| TCCATGAGCACCGAGATAAC+TGG | 0.375189 | 7.3:-9192767 | MS.gene025610:CDS |
| CCTTTGCACCAACTGGATTG+TGG | 0.378554 | 7.3:+9189358 | None:intergenic |
| CAGCTAGATATTTGTCAATA+GGG | 0.378918 | 7.3:-9191528 | MS.gene025610:intron |
| AGAAAGATTTAGCAATATTT+GGG | 0.379240 | 7.3:-9192093 | MS.gene025610:CDS |
| TGTTGGAGTGCATGGAAGTT+AGG | 0.384969 | 7.3:-9191410 | MS.gene025610:CDS |
| ACTTCGGCTTTCGGCTCTGC+TGG | 0.390183 | 7.3:-9193183 | MS.gene025610:CDS |
| GTTCTGTTAGCTCACTTCTC+AGG | 0.390193 | 7.3:+9187573 | None:intergenic |
| CGAGATAACTGGTAGTTTGA+TGG | 0.391634 | 7.3:-9192756 | MS.gene025610:CDS |
| CAAAACCACTCGTATGCTTT+GGG | 0.394710 | 7.3:+9193125 | None:intergenic |
| ATGGCTTCAGTTATTCCAAT+TGG | 0.395677 | 7.3:-9186672 | MS.gene025610:CDS |
| TTTGTAGTGCTGGTGATTCC+AGG | 0.396360 | 7.3:+9191691 | None:intergenic |
| GGAGAAGACACTGTCATATC+AGG | 0.397707 | 7.3:-9195846 | MS.gene025610:intron |
| TTTAGCAAGCTAAAGGAAAC+AGG | 0.404652 | 7.3:-9186970 | MS.gene025610:CDS |
| AGAATGCTAATGTAGATAGA+AGG | 0.404722 | 7.3:-9189308 | MS.gene025610:CDS |
| TTTACAGGAGTTGGTGCCTA+TGG | 0.413970 | 7.3:-9187076 | MS.gene025610:intron |
| AGAAGCATTAAAACTCCAAT+TGG | 0.414850 | 7.3:+9186657 | None:intergenic |
| TCCTTCATTAATAAGTTTGA+AGG | 0.416263 | 7.3:-9193074 | MS.gene025610:CDS |
| GGTGGATTTCACTGGATTCT+GGG | 0.417123 | 7.3:+9187606 | None:intergenic |
| TATGCATCAAGTGCTAGTTC+TGG | 0.420338 | 7.3:-9189907 | MS.gene025610:CDS |
| ATCTTCCCTTGTTTAGTAGC+TGG | 0.428103 | 7.3:+9196248 | None:intergenic |
| TCCTACAGGTTACTGCTGTT+GGG | 0.428389 | 7.3:-9186403 | MS.gene025610:intron |
| TTCAAAGCGGTGGATTTCAC+TGG | 0.431856 | 7.3:+9187598 | None:intergenic |
| CTGGTGATTCCAGGATAAAA+AGG | 0.437758 | 7.3:+9191700 | None:intergenic |
| ACTCGCTCTCAAGACAATCT+TGG | 0.438442 | 7.3:-9195907 | MS.gene025610:CDS |
| AGAGCAAACATCTAGTGCTT+GGG | 0.439804 | 7.3:+9191612 | None:intergenic |
| AGCATCCCTAATAGAACTAT+AGG | 0.446449 | 7.3:+9192700 | None:intergenic |
| TGTTAGGCACAAGAAGTTGT+TGG | 0.446712 | 7.3:-9191427 | MS.gene025610:intron |
| GAACTTATGGATGAGAGCTC+AGG | 0.450166 | 7.3:+9191851 | None:intergenic |
| TATTTCCTTCCTTCTGAACC+TGG | 0.451158 | 7.3:+9187007 | None:intergenic |
| AAATGAGGGTGAAATTGAAT+AGG | 0.451529 | 7.3:-9196018 | MS.gene025610:CDS |
| CGTCTCTGAGCCCACATCAA+TGG | 0.459180 | 7.3:+9186161 | None:intergenic |
| CCCTTCAAACTTATTAATGA+AGG | 0.460147 | 7.3:+9193073 | None:intergenic |
| CAGAAAGGTTGGATATCTTC+AGG | 0.462414 | 7.3:-9186212 | MS.gene025610:CDS |
| GAGAACGCACCGCCATCTAT+AGG | 0.463601 | 7.3:-9184862 | MS.gene025610:CDS |
| CAAGAAGTTGTTGGAGTGCA+TGG | 0.465213 | 7.3:-9191418 | MS.gene025610:CDS |
| ACCAGTTATCTCGGTGCTCA+TGG | 0.466363 | 7.3:+9192766 | None:intergenic |
| GTGAGTTACCTTCCTATAGA+TGG | 0.467415 | 7.3:+9184850 | None:intergenic |
| ATCTTTATATGATGCTGCTA+GGG | 0.468878 | 7.3:-9195957 | MS.gene025610:CDS |
| TGTTGGGCATGCAGCCATGT+TGG | 0.470203 | 7.3:-9186387 | MS.gene025610:CDS |
| GTGTCTTCTCCCACGCAATT+CGG | 0.476768 | 7.3:+9195858 | None:intergenic |
| GATGTATCACTTCTTATGCT+TGG | 0.477847 | 7.3:-9192854 | MS.gene025610:CDS |
| GAGAGCAAACATCTAGTGCT+TGG | 0.480605 | 7.3:+9191611 | None:intergenic |
| TTATTTGTATCTTCTGATGA+CGG | 0.481320 | 7.3:-9196100 | MS.gene025610:CDS |
| ATGAAGGAAGCCACTACAGC+TGG | 0.483272 | 7.3:+9193089 | None:intergenic |
| ATTGACACTGGTGCTGCAAT+GGG | 0.484090 | 7.3:-9186771 | MS.gene025610:CDS |
| TAAGAAGTATGTACCAGCTC+TGG | 0.489958 | 7.3:-9186357 | MS.gene025610:intron |
| CAACTGTCTACATCAAATGA+AGG | 0.490623 | 7.3:-9187638 | MS.gene025610:CDS |
| TTATTGATAAGGAGAGAATA+TGG | 0.495546 | 7.3:-9192553 | MS.gene025610:CDS |
| ACTGTCCCGCGGTTCAGAGA+TGG | 0.495607 | 7.3:+9184942 | None:intergenic |
| GACTTATGCACCAGAAAGGT+TGG | 0.496812 | 7.3:-9186223 | MS.gene025610:CDS |
| CCCTAATAGAACTATAGGCT+TGG | 0.500485 | 7.3:+9192705 | None:intergenic |
| TATAGTTCTATTAGGGATGC+TGG | 0.503156 | 7.3:-9192698 | MS.gene025610:CDS |
| TATTGACACTGGTGCTGCAA+TGG | 0.505462 | 7.3:-9186772 | MS.gene025610:CDS |
| GGAACTGCTTCAGCATTTGG+AGG | 0.506054 | 7.3:+9191634 | None:intergenic |
| GCAGGTGGTTTGTGAAGAGT+TGG | 0.506174 | 7.3:-9191731 | MS.gene025610:intron |
| ATTGCTGTAATCATTAAAGT+TGG | 0.509471 | 7.3:-9192821 | MS.gene025610:CDS |
| GTCGAAGATGATTTCTGTGA+CGG | 0.509789 | 7.3:-9195989 | MS.gene025610:CDS |
| CACTACAGCTGGAACTTGCT+TGG | 0.509911 | 7.3:+9193100 | None:intergenic |
| GAAACCGTTTGATAAAAGAA+AGG | 0.510199 | 7.3:+9192039 | None:intergenic |
| TTCTCAGGTGTTCAAAGCGG+TGG | 0.510621 | 7.3:+9187588 | None:intergenic |
| TGTAATCATTAAAGTTGGTC+CGG | 0.511469 | 7.3:-9192816 | MS.gene025610:CDS |
| CTGTCCCGCGGTTCAGAGAT+GGG | 0.511700 | 7.3:+9184943 | None:intergenic |
| GTTCAGAAAGGACTTTGTAC+AGG | 0.515507 | 7.3:-9189133 | MS.gene025610:intron |
| AATCTTTATATGATGCTGCT+AGG | 0.516424 | 7.3:-9195958 | MS.gene025610:CDS |
| TTGCTCTGAAAGATGCCTCC+AGG | 0.517749 | 7.3:+9189815 | None:intergenic |
| ATACAGACCTTGAGAAAATG+AGG | 0.517878 | 7.3:-9196033 | MS.gene025610:CDS |
| TGGTTTGTGAAGAGTTGGAT+TGG | 0.520806 | 7.3:-9191726 | MS.gene025610:CDS |
| CATCGACTTATGCACCAGAA+AGG | 0.521547 | 7.3:-9186227 | MS.gene025610:CDS |
| AGATTCATCGGTAAATCTCA+GGG | 0.524988 | 7.3:-9189156 | MS.gene025610:CDS |
| GAGTCGACGACGGCGAGAGC+GGG | 0.525315 | 7.3:+9184919 | None:intergenic |
| TTTGCACCAACTGGATTGTG+GGG | 0.526998 | 7.3:+9189360 | None:intergenic |
| CAAGCAAGTTCCAGCTGTAG+TGG | 0.528171 | 7.3:-9193099 | MS.gene025610:CDS |
| CTTCTTAATAGCAGCCAACA+TGG | 0.528491 | 7.3:+9186373 | None:intergenic |
| TACATCAAATGAAGGTATTG+TGG | 0.532439 | 7.3:-9187630 | MS.gene025610:CDS |
| TCGAAGATGATTTCTGTGAC+GGG | 0.533820 | 7.3:-9195988 | MS.gene025610:CDS |
| AGATCTCTCAACTGTTCTGT+TGG | 0.543636 | 7.3:+9190262 | None:intergenic |
| AACTTATGGATGAGAGCTCA+GGG | 0.545972 | 7.3:+9191852 | None:intergenic |
| CCACAATCCAGTTGGTGCAA+AGG | 0.547222 | 7.3:-9189358 | MS.gene025610:CDS |
| TGATGCTGGCGTTGTTCAGA+TGG | 0.550365 | 7.3:-9187031 | MS.gene025610:CDS |
| ACCCAGAAAGCAACCTCTAG+TGG | 0.553565 | 7.3:+9192605 | None:intergenic |
| GACAACATCAGAAAGTATAG+AGG | 0.554519 | 7.3:-9192522 | MS.gene025610:intron |
| TGGCGTTGTTCAGATGGTCC+AGG | 0.554568 | 7.3:-9187025 | MS.gene025610:CDS |
| TTCACTCAGGGAGTTGATGT+TGG | 0.557165 | 7.3:-9189384 | MS.gene025610:intron |
| CATCAAACTACCAGTTATCT+CGG | 0.557345 | 7.3:+9192757 | None:intergenic |
| TGTATTGATCCAGTTTACTT+CGG | 0.557422 | 7.3:-9193199 | MS.gene025610:intron |
| GTTGATTGTTACCTTAACGT+TGG | 0.557832 | 7.3:+9196538 | None:intergenic |
| TAGCTGCTTTCACATTAGAA+GGG | 0.557977 | 7.3:+9191545 | None:intergenic |
| AACTGAAGCCATGTCAGTCA+AGG | 0.564859 | 7.3:+9186683 | None:intergenic |
| TCAGATGGTCCAGGTTCAGA+AGG | 0.566222 | 7.3:-9187016 | MS.gene025610:CDS |
| GCTTTATAAAACACAGTACA+TGG | 0.567908 | 7.3:-9191576 | MS.gene025610:CDS |
| GCAAATGTCAACCATTGATG+TGG | 0.568036 | 7.3:-9186172 | MS.gene025610:CDS |
| GGTGCGTTCTCTGACGGAGA+TGG | 0.568756 | 7.3:+9184874 | None:intergenic |
| TTAACGTTGGAAAATTGTTG+TGG | 0.570822 | 7.3:+9196551 | None:intergenic |
| CCTTCATTAATAAGTTTGAA+GGG | 0.571071 | 7.3:-9193073 | MS.gene025610:intron |
| GGAAGAAGTTGTGCTAAGAC+TGG | 0.571430 | 7.3:-9189950 | MS.gene025610:CDS |
| TAAATCTCAGGGGTTCAGAA+AGG | 0.571531 | 7.3:-9189145 | MS.gene025610:CDS |
| GCTAACAGAACTTGAGAGAC+GGG | 0.571989 | 7.3:-9187561 | MS.gene025610:CDS |
| GCATTGCCAGCTACTAAACA+AGG | 0.572396 | 7.3:-9196254 | MS.gene025610:CDS |
| ATGTCAATGTGTTTGTCCAA+AGG | 0.574451 | 7.3:-9194922 | MS.gene025610:CDS |
| CAGAAGGTACATACCAGAGC+TGG | 0.576986 | 7.3:+9186344 | None:intergenic |
| GGTGAAATTGAATAGGCCAT+TGG | 0.580172 | 7.3:-9196011 | MS.gene025610:CDS |
| AATAAATAGGATATTTGGCA+AGG | 0.581964 | 7.3:-9186810 | MS.gene025610:intron |
| GATGGCGGTGCGTTCTCTGA+CGG | 0.582396 | 7.3:+9184868 | None:intergenic |
| TCAACGCAATGCAGACTCAA+AGG | 0.582414 | 7.3:-9196287 | MS.gene025610:CDS |
| ATTGACCGAGAAAGAGAAGA+TGG | 0.583848 | 7.3:-9186718 | MS.gene025610:CDS |
| ATATTATAGACCTAAAAGAA+AGG | 0.586547 | 7.3:-9196134 | MS.gene025610:CDS |
| CTTTCTGGTGCATAAGTCGA+TGG | 0.589378 | 7.3:+9186228 | None:intergenic |
| AGCTAACAGAACTTGAGAGA+CGG | 0.590083 | 7.3:-9187562 | MS.gene025610:CDS |
| ATGGTCCAGGTTCAGAAGGA+AGG | 0.591065 | 7.3:-9187012 | MS.gene025610:CDS |
| GTGGCGTAGTTTAACCGCCA+TGG | 0.593483 | 7.3:+9196570 | None:intergenic |
| CGTTCTCTGACGGAGATGGT+AGG | 0.594905 | 7.3:+9184878 | None:intergenic |
| TGGTGTAGACCGAATTGCGT+GGG | 0.595867 | 7.3:-9195867 | MS.gene025610:CDS |
| ACCTTATAAAATCTTCAACT+GGG | 0.598080 | 7.3:+9192002 | None:intergenic |
| TAAGAGAACCTTGACTGACA+TGG | 0.599111 | 7.3:-9186691 | MS.gene025610:CDS |
| GAGTTGGTGCCTATGGATGA+TGG | 0.604756 | 7.3:-9187069 | MS.gene025610:CDS |
| CAGAAATCATCTTCGACCAA+TGG | 0.604894 | 7.3:+9195995 | None:intergenic |
| TGACGGCGTAAGTGTTAATG+AGG | 0.608382 | 7.3:-9196083 | MS.gene025610:CDS |
| AGTGTTAATGAGGACTCTGA+TGG | 0.610361 | 7.3:-9196073 | MS.gene025610:CDS |
| CAAATGTCAACCATTGATGT+GGG | 0.611615 | 7.3:-9186171 | MS.gene025610:CDS |
| TTGCTTTAGGCAGAAGTACA+CGG | 0.611878 | 7.3:-9192063 | MS.gene025610:CDS |
| GAGCAAACATCTAGTGCTTG+GGG | 0.617768 | 7.3:+9191613 | None:intergenic |
| GGTAGGCGGTGCTGTAACGT+TGG | 0.618309 | 7.3:+9184895 | None:intergenic |
| CCTCGAGCTGCATTGTGCAG+AGG | 0.622898 | 7.3:-9192644 | MS.gene025610:CDS |
| TGCAGAGGTAAAATTGAGCA+AGG | 0.625726 | 7.3:-9192629 | MS.gene025610:CDS |
| TTCACTTGCAGCTTGCAACA+GGG | 0.628085 | 7.3:+9194976 | None:intergenic |
| GCTCGATATAGTGATGATGC+TGG | 0.631943 | 7.3:-9187045 | MS.gene025610:CDS |
| GTGCATAAAAGTAAACAAGA+AGG | 0.632247 | 7.3:-9191658 | MS.gene025610:CDS |
| TTCATATCAGTTGTACGTGG+AGG | 0.632966 | 7.3:-9191831 | MS.gene025610:intron |
| TTGGTGTAGACCGAATTGCG+TGG | 0.633827 | 7.3:-9195868 | MS.gene025610:CDS |
| TCAATGTGTTTGTCCAAAGG+AGG | 0.638020 | 7.3:-9194919 | MS.gene025610:intron |
| ACGTGCTTATAAATCAGTGA+AGG | 0.639142 | 7.3:-9187531 | MS.gene025610:CDS |
| ACGCACCGCCATCTATAGGA+AGG | 0.641563 | 7.3:-9184858 | MS.gene025610:intron |
| TATCGAGCACCATCATCCAT+AGG | 0.642680 | 7.3:+9187060 | None:intergenic |
| GTTGGTCCCCACAATCCAGT+TGG | 0.643343 | 7.3:-9189366 | MS.gene025610:CDS |
| TGAGTCGACGACGGCGAGAG+CGG | 0.644113 | 7.3:+9184918 | None:intergenic |
| CACTTCTCAGGTGTTCAAAG+CGG | 0.649116 | 7.3:+9187585 | None:intergenic |
| TACAGACCTTGAGAAAATGA+GGG | 0.650005 | 7.3:-9196032 | MS.gene025610:CDS |
| CCTCTGCACAATGCAGCTCG+AGG | 0.651114 | 7.3:+9192644 | None:intergenic |
| GCGAGAGCGGGACTGTCCCG+CGG | 0.657569 | 7.3:+9184931 | None:intergenic |
| AATTGAGCAAGGTCCACTAG+AGG | 0.658397 | 7.3:-9192618 | MS.gene025610:CDS |
| CAACTTCTAGCTATTGACAC+TGG | 0.659417 | 7.3:-9186783 | MS.gene025610:CDS |
| AACAGCCCAAAGCATACGAG+TGG | 0.660241 | 7.3:-9193130 | MS.gene025610:CDS |
| TTATAAATCAGTGAAGGACG+AGG | 0.670981 | 7.3:-9187525 | MS.gene025610:intron |
| TCTCTGACGGAGATGGTAGG+CGG | 0.681491 | 7.3:+9184881 | None:intergenic |
| AGTTACCTTCCTATAGATGG+CGG | 0.684661 | 7.3:+9184853 | None:intergenic |
| CATTGCCAGCTACTAAACAA+GGG | 0.690003 | 7.3:-9196253 | MS.gene025610:CDS |
| TCTGGGTAAACATTTCTCAG+AGG | 0.692174 | 7.3:-9192589 | MS.gene025610:CDS |
| TAACGTTGGTGAGTCGACGA+CGG | 0.695210 | 7.3:+9184909 | None:intergenic |
| GTGATGCAGAGATAAGACAT+TGG | 0.698821 | 7.3:-9190294 | MS.gene025610:intron |
| GATTCATCGGTAAATCTCAG+GGG | 0.699816 | 7.3:-9189155 | MS.gene025610:CDS |
| AAGTTCATATCAGTTGTACG+TGG | 0.710127 | 7.3:-9191834 | MS.gene025610:CDS |
| AAAAGAAGCTGAATTCCTGG+AGG | 0.737248 | 7.3:-9189830 | MS.gene025610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 9184666 | 9196590 | 9184666 | ID=MS.gene025610 |
| chr7.3 | mRNA | 9184666 | 9196590 | 9184666 | ID=MS.gene025610.t1;Parent=MS.gene025610 |
| chr7.3 | exon | 9196550 | 9196590 | 9196550 | ID=MS.gene025610.t1.exon1;Parent=MS.gene025610.t1 |
| chr7.3 | CDS | 9196550 | 9196590 | 9196550 | ID=cds.MS.gene025610.t1;Parent=MS.gene025610.t1 |
| chr7.3 | exon | 9195847 | 9196336 | 9195847 | ID=MS.gene025610.t1.exon2;Parent=MS.gene025610.t1 |
| chr7.3 | CDS | 9195847 | 9196336 | 9195847 | ID=cds.MS.gene025610.t1;Parent=MS.gene025610.t1 |
| chr7.3 | exon | 9194920 | 9195011 | 9194920 | ID=MS.gene025610.t1.exon3;Parent=MS.gene025610.t1 |
| chr7.3 | CDS | 9194920 | 9195011 | 9194920 | ID=cds.MS.gene025610.t1;Parent=MS.gene025610.t1 |
| chr7.3 | exon | 9193074 | 9193208 | 9193074 | ID=MS.gene025610.t1.exon4;Parent=MS.gene025610.t1 |
| chr7.3 | CDS | 9193074 | 9193208 | 9193074 | ID=cds.MS.gene025610.t1;Parent=MS.gene025610.t1 |
| chr7.3 | exon | 9192523 | 9192916 | 9192523 | ID=MS.gene025610.t1.exon5;Parent=MS.gene025610.t1 |
| chr7.3 | CDS | 9192523 | 9192916 | 9192523 | ID=cds.MS.gene025610.t1;Parent=MS.gene025610.t1 |
| chr7.3 | exon | 9192004 | 9192122 | 9192004 | ID=MS.gene025610.t1.exon6;Parent=MS.gene025610.t1 |
| chr7.3 | CDS | 9192004 | 9192122 | 9192004 | ID=cds.MS.gene025610.t1;Parent=MS.gene025610.t1 |
| chr7.3 | exon | 9191832 | 9191904 | 9191832 | ID=MS.gene025610.t1.exon7;Parent=MS.gene025610.t1 |
| chr7.3 | CDS | 9191832 | 9191904 | 9191832 | ID=cds.MS.gene025610.t1;Parent=MS.gene025610.t1 |
| chr7.3 | exon | 9191529 | 9191749 | 9191529 | ID=MS.gene025610.t1.exon8;Parent=MS.gene025610.t1 |
| chr7.3 | CDS | 9191529 | 9191749 | 9191529 | ID=cds.MS.gene025610.t1;Parent=MS.gene025610.t1 |
| chr7.3 | exon | 9191402 | 9191443 | 9191402 | ID=MS.gene025610.t1.exon9;Parent=MS.gene025610.t1 |
| chr7.3 | CDS | 9191402 | 9191443 | 9191402 | ID=cds.MS.gene025610.t1;Parent=MS.gene025610.t1 |
| chr7.3 | exon | 9190220 | 9190307 | 9190220 | ID=MS.gene025610.t1.exon10;Parent=MS.gene025610.t1 |
| chr7.3 | CDS | 9190220 | 9190307 | 9190220 | ID=cds.MS.gene025610.t1;Parent=MS.gene025610.t1 |
| chr7.3 | exon | 9189795 | 9189986 | 9189795 | ID=MS.gene025610.t1.exon11;Parent=MS.gene025610.t1 |
| chr7.3 | CDS | 9189795 | 9189986 | 9189795 | ID=cds.MS.gene025610.t1;Parent=MS.gene025610.t1 |
| chr7.3 | exon | 9189303 | 9189397 | 9189303 | ID=MS.gene025610.t1.exon12;Parent=MS.gene025610.t1 |
| chr7.3 | CDS | 9189303 | 9189397 | 9189303 | ID=cds.MS.gene025610.t1;Parent=MS.gene025610.t1 |
| chr7.3 | exon | 9189134 | 9189176 | 9189134 | ID=MS.gene025610.t1.exon13;Parent=MS.gene025610.t1 |
| chr7.3 | CDS | 9189134 | 9189176 | 9189134 | ID=cds.MS.gene025610.t1;Parent=MS.gene025610.t1 |
| chr7.3 | exon | 9187526 | 9187672 | 9187526 | ID=MS.gene025610.t1.exon14;Parent=MS.gene025610.t1 |
| chr7.3 | CDS | 9187526 | 9187672 | 9187526 | ID=cds.MS.gene025610.t1;Parent=MS.gene025610.t1 |
| chr7.3 | exon | 9186966 | 9187091 | 9186966 | ID=MS.gene025610.t1.exon15;Parent=MS.gene025610.t1 |
| chr7.3 | CDS | 9186966 | 9187091 | 9186966 | ID=cds.MS.gene025610.t1;Parent=MS.gene025610.t1 |
| chr7.3 | exon | 9186653 | 9186823 | 9186653 | ID=MS.gene025610.t1.exon16;Parent=MS.gene025610.t1 |
| chr7.3 | CDS | 9186653 | 9186823 | 9186653 | ID=cds.MS.gene025610.t1;Parent=MS.gene025610.t1 |
| chr7.3 | exon | 9186358 | 9186417 | 9186358 | ID=MS.gene025610.t1.exon17;Parent=MS.gene025610.t1 |
| chr7.3 | CDS | 9186358 | 9186417 | 9186358 | ID=cds.MS.gene025610.t1;Parent=MS.gene025610.t1 |
| chr7.3 | exon | 9186159 | 9186253 | 9186159 | ID=MS.gene025610.t1.exon18;Parent=MS.gene025610.t1 |
| chr7.3 | CDS | 9186159 | 9186253 | 9186159 | ID=cds.MS.gene025610.t1;Parent=MS.gene025610.t1 |
| chr7.3 | exon | 9184859 | 9184972 | 9184859 | ID=MS.gene025610.t1.exon19;Parent=MS.gene025610.t1 |
| chr7.3 | CDS | 9184859 | 9184972 | 9184859 | ID=cds.MS.gene025610.t1;Parent=MS.gene025610.t1 |
| chr7.3 | exon | 9184666 | 9184696 | 9184666 | ID=MS.gene025610.t1.exon20;Parent=MS.gene025610.t1 |
| chr7.3 | CDS | 9184666 | 9184696 | 9184666 | ID=cds.MS.gene025610.t1;Parent=MS.gene025610.t1 |
| Gene Sequence |
| Protein sequence |
