Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026313.t1 | XP_013466773.1 | 94 | 233 | 14 | 0 | 1 | 233 | 1 | 233 | 4.30E-118 | 434.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026313.t1 | A0A072VHB3 | 94.0 | 233 | 14 | 0 | 1 | 233 | 1 | 233 | 3.1e-118 | 434.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene98743 | MS.gene026313 | PPI |
| MS.gene026313 | MS.gene032192 | PPI |
| MS.gene85263 | MS.gene026313 | PPI |
| MS.gene026313 | MS.gene051997 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026313.t1 | MTR_1g035700 | 93.991 | 233 | 14 | 0 | 1 | 233 | 1 | 233 | 4.07e-166 | 460 |
| MS.gene026313.t1 | MTR_1g035700 | 93.991 | 233 | 14 | 0 | 1 | 233 | 1 | 233 | 2.74e-165 | 460 |
| MS.gene026313.t1 | MTR_1g035700 | 91.250 | 240 | 14 | 1 | 1 | 233 | 1 | 240 | 2.38e-163 | 453 |
| MS.gene026313.t1 | MTR_4g074120 | 59.746 | 236 | 89 | 4 | 1 | 233 | 1 | 233 | 9.37e-93 | 273 |
| MS.gene026313.t1 | MTR_4g074120 | 59.746 | 236 | 89 | 4 | 1 | 233 | 1 | 233 | 4.84e-92 | 272 |
| MS.gene026313.t1 | MTR_2g099155 | 41.714 | 175 | 86 | 5 | 72 | 233 | 14 | 185 | 1.80e-32 | 119 |
| MS.gene026313.t1 | MTR_2g099155 | 41.714 | 175 | 86 | 5 | 72 | 233 | 14 | 185 | 2.12e-32 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026313.t1 | AT1G60670 | 48.515 | 202 | 79 | 9 | 37 | 232 | 1 | 183 | 8.34e-45 | 150 |
| MS.gene026313.t1 | AT1G60670 | 48.515 | 202 | 79 | 9 | 37 | 232 | 1 | 183 | 1.11e-44 | 149 |
| MS.gene026313.t1 | AT1G60670 | 48.515 | 202 | 79 | 9 | 37 | 232 | 1 | 183 | 2.33e-44 | 150 |
| MS.gene026313.t1 | AT1G60670 | 48.515 | 202 | 79 | 9 | 37 | 232 | 1 | 183 | 3.95e-44 | 149 |
| MS.gene026313.t1 | AT1G60670 | 47.236 | 199 | 81 | 7 | 37 | 232 | 1 | 178 | 5.64e-43 | 146 |
| MS.gene026313.t1 | AT1G10820 | 45.771 | 201 | 92 | 6 | 37 | 233 | 1 | 188 | 1.06e-39 | 138 |
| MS.gene026313.t1 | AT1G10820 | 54.110 | 146 | 63 | 3 | 88 | 233 | 21 | 162 | 1.17e-38 | 134 |
| MS.gene026313.t1 | AT3G07565 | 42.105 | 152 | 84 | 2 | 85 | 233 | 52 | 202 | 4.46e-35 | 126 |
| MS.gene026313.t1 | AT3G07565 | 41.830 | 153 | 84 | 3 | 85 | 233 | 52 | 203 | 2.95e-33 | 121 |
| MS.gene026313.t1 | AT3G07565 | 41.176 | 153 | 85 | 3 | 85 | 233 | 52 | 203 | 7.86e-33 | 120 |
| MS.gene026313.t1 | AT3G07565 | 41.322 | 121 | 68 | 1 | 85 | 202 | 52 | 172 | 7.92e-28 | 105 |
| MS.gene026313.t1 | AT1G68160 | 36.481 | 233 | 125 | 6 | 1 | 232 | 3 | 213 | 8.49e-21 | 89.0 |
Find 57 sgRNAs with CRISPR-Local
Find 340 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCCAATGGGAAATTATTT+TGG | 0.109896 | 1.1:+20150354 | MS.gene026313:CDS |
| CTTCTTGTTGATTCTGTTCC+TGG | 0.126351 | 1.1:+20150483 | MS.gene026313:CDS |
| CACCTTGAAAGTAGATAAAT+TGG | 0.239951 | 1.1:-20154613 | None:intergenic |
| GGAATTCAAGCGTTGTTAAT+AGG | 0.287605 | 1.1:+20150415 | MS.gene026313:CDS |
| GGGTTGAATAATGATACTTC+TGG | 0.310719 | 1.1:+20150375 | MS.gene026313:CDS |
| TGTTGATGAACAGTATAAAT+TGG | 0.341813 | 1.1:+20150542 | MS.gene026313:CDS |
| ATATGAATTCATCTTTGAAT+TGG | 0.346328 | 1.1:+20150280 | MS.gene026313:CDS |
| TTCCAATTTATCTACTTTCA+AGG | 0.352868 | 1.1:+20154611 | MS.gene026313:CDS |
| TTCTGGGATGATGATGTATT+CGG | 0.353610 | 1.1:+20150392 | MS.gene026313:CDS |
| CACGAATACGTGGCCACACT+TGG | 0.381306 | 1.1:-20153802 | None:intergenic |
| CTGTTCGTGATGTTGCTTTG+AGG | 0.405905 | 1.1:+20152643 | MS.gene026313:CDS |
| TTGACATACCTCATGATACT+TGG | 0.412002 | 1.1:-20152594 | None:intergenic |
| TTTCCCATTGGAACCATCTC+AGG | 0.412066 | 1.1:-20150345 | None:intergenic |
| TGATCCCGTGAAGCGACTCT+TGG | 0.424126 | 1.1:+20154557 | MS.gene026313:CDS |
| AAGGGTGCTTCGTAAATGTT+TGG | 0.435779 | 1.1:-20155962 | None:intergenic |
| TCTGGGATGATGATGTATTC+GGG | 0.440187 | 1.1:+20150393 | MS.gene026313:CDS |
| TGGTAAAGAAGCTCAACAAT+AGG | 0.448131 | 1.1:+20153064 | MS.gene026313:CDS |
| CATGCAATATCATTTGAATC+TGG | 0.456790 | 1.1:+20150303 | MS.gene026313:CDS |
| ATTGAAGCATGATGCAGGTT+TGG | 0.461747 | 1.1:+20150506 | MS.gene026313:CDS |
| CAACGGATACCATATGATAA+TGG | 0.463701 | 1.1:+20153850 | MS.gene026313:CDS |
| GCCACACTTGGGGTTAGAAC+TGG | 0.480931 | 1.1:-20153790 | None:intergenic |
| GTGATGTTGCTTTGAGGTGT+AGG | 0.481867 | 1.1:+20152649 | MS.gene026313:CDS |
| TTCGTGTGTATCACAACCTA+TGG | 0.484014 | 1.1:+20153819 | MS.gene026313:CDS |
| TTATACTGACCATTATCATA+TGG | 0.485193 | 1.1:-20153859 | None:intergenic |
| GGTTGAATAATGATACTTCT+GGG | 0.485200 | 1.1:+20150376 | MS.gene026313:CDS |
| TGCTCCAAGAGTCGCTTCAC+GGG | 0.489073 | 1.1:-20154561 | None:intergenic |
| TGTTAGTAGCTTGCCTGAGA+TGG | 0.491391 | 1.1:+20150332 | MS.gene026313:CDS |
| AACCCAAAATAATTTCCCAT+TGG | 0.495621 | 1.1:-20150357 | None:intergenic |
| CCTGGATTGAAGCATGATGC+AGG | 0.497346 | 1.1:+20150501 | MS.gene026313:CDS |
| ACTGGCTGCATACACTGCTT+TGG | 0.504226 | 1.1:-20153772 | None:intergenic |
| TTCGTCTGTTATGAGTCAAC+GGG | 0.510025 | 1.1:+20150440 | MS.gene026313:CDS |
| TTGCTCCAAGAGTCGCTTCA+CGG | 0.512660 | 1.1:-20154562 | None:intergenic |
| ACGAATACGTGGCCACACTT+GGG | 0.513683 | 1.1:-20153801 | None:intergenic |
| TGCTTTGGTGATGAAACCAT+TGG | 0.521864 | 1.1:-20153757 | None:intergenic |
| CCTGCATCATGCTTCAATCC+AGG | 0.527886 | 1.1:-20150501 | None:intergenic |
| CTTGCCTGAGATGGTTCCAA+TGG | 0.539348 | 1.1:+20150341 | MS.gene026313:CDS |
| AAACATTTACGAAGCACCCT+TGG | 0.540323 | 1.1:+20155964 | MS.gene026313:CDS |
| ATCCGTTGACTTCTGTCCAT+AGG | 0.549951 | 1.1:-20153835 | None:intergenic |
| AGTCAACGGGAATATGTGTC+TGG | 0.557263 | 1.1:+20150453 | MS.gene026313:CDS |
| AACAGTATAAATTGGAGGAG+GGG | 0.559930 | 1.1:+20150550 | MS.gene026313:CDS |
| TCTTCTTCAGGATAAGCCAA+TGG | 0.562507 | 1.1:+20153741 | MS.gene026313:intron |
| CGAATACGTGGCCACACTTG+GGG | 0.565432 | 1.1:-20153800 | None:intergenic |
| TGAACAGTATAAATTGGAGG+AGG | 0.569871 | 1.1:+20150548 | MS.gene026313:CDS |
| TTGCCTGAGATGGTTCCAAT+GGG | 0.573001 | 1.1:+20150342 | MS.gene026313:CDS |
| GTTCGTCTGTTATGAGTCAA+CGG | 0.597007 | 1.1:+20150439 | MS.gene026313:CDS |
| TGATGAACAGTATAAATTGG+AGG | 0.605084 | 1.1:+20150545 | MS.gene026313:CDS |
| GAACAGTATAAATTGGAGGA+GGG | 0.605834 | 1.1:+20150549 | MS.gene026313:CDS |
| ATGCAGGTTTGGCTGCTGAG+TGG | 0.614045 | 1.1:+20150517 | MS.gene026313:CDS |
| ATGTTGCTTTGAGGTGTAGG+TGG | 0.619616 | 1.1:+20152652 | MS.gene026313:CDS |
| AAAGAAGCTCAACAATAGGA+AGG | 0.622268 | 1.1:+20153068 | MS.gene026313:CDS |
| GCCAGTTCTAACCCCAAGTG+TGG | 0.637597 | 1.1:+20153789 | MS.gene026313:CDS |
| GCAATATCATTTGAATCTGG+TGG | 0.655444 | 1.1:+20150306 | MS.gene026313:CDS |
| TTGTGATACACACGAATACG+TGG | 0.661179 | 1.1:-20153812 | None:intergenic |
| AAGGAAATCAGAAGAGCACA+TGG | 0.666279 | 1.1:+20153044 | MS.gene026313:CDS |
| CTGGGATGATGATGTATTCG+GGG | 0.667463 | 1.1:+20150394 | MS.gene026313:CDS |
| CTGATGAGCCAAGTATCATG+AGG | 0.671779 | 1.1:+20152586 | MS.gene026313:CDS |
| AACCTATGGACAGAAGTCAA+CGG | 0.697598 | 1.1:+20153833 | MS.gene026313:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTAATAAAATAATATT+AGG | - | chr1.1:20152720-20152739 | None:intergenic | 0.0% |
| !! | TAAAAATGTATTTATATGTA+TGG | - | chr1.1:20150980-20150999 | None:intergenic | 10.0% |
| !!! | ATACATATAAATACATTTTT+AGG | + | chr1.1:20150979-20150998 | MS.gene026313:intron | 10.0% |
| !!! | TGATAAAAAACATTTTATAA+AGG | - | chr1.1:20155016-20155035 | None:intergenic | 10.0% |
| !! | ATAAGAAAATAATAACTTCA+TGG | - | chr1.1:20151594-20151613 | None:intergenic | 15.0% |
| !! | ATGAATAATCATACTTTATT+AGG | - | chr1.1:20154257-20154276 | None:intergenic | 15.0% |
| !! | TACTAAAAATAACAAATACT+AGG | + | chr1.1:20153980-20153999 | MS.gene026313:intron | 15.0% |
| !! | TTGCTATAAATTAATTCTAA+AGG | + | chr1.1:20154186-20154205 | MS.gene026313:intron | 15.0% |
| !! | TTTAAAAAAACAAAACAAGA+TGG | - | chr1.1:20151850-20151869 | None:intergenic | 15.0% |
| !!! | AACCTTTAAAATTTGAAATT+TGG | + | chr1.1:20152195-20152214 | MS.gene026313:intron | 15.0% |
| !!! | ATTTCAAATTTTAAAGGTTA+AGG | - | chr1.1:20152194-20152213 | None:intergenic | 15.0% |
| !!! | TATAAATTAATTCTAAAGGA+TGG | + | chr1.1:20154190-20154209 | MS.gene026313:intron | 15.0% |
| !!! | TATTTTTATCCAAGATAAAA+AGG | + | chr1.1:20152755-20152774 | MS.gene026313:intron | 15.0% |
| !!! | TTCCAAATTTCAAATTTTAA+AGG | - | chr1.1:20152200-20152219 | None:intergenic | 15.0% |
| !!! | TTTTTCTTTTTGCAAAAAAA+AGG | + | chr1.1:20151366-20151385 | MS.gene026313:intron | 15.0% |
| !! | AAAAAAAGGAAAGAAAACAA+GGG | - | chr1.1:20152543-20152562 | None:intergenic | 20.0% |
| !! | AAATGTATTTATATGTATGG+TGG | - | chr1.1:20150977-20150996 | None:intergenic | 20.0% |
| !! | AATGTATTTATATGTATGGT+GGG | - | chr1.1:20150976-20150995 | None:intergenic | 20.0% |
| !! | ACTCCAAAATTTAATTCTAT+GGG | + | chr1.1:20154764-20154783 | MS.gene026313:intron | 20.0% |
| !! | ACTTTATAGTTACTGTTATA+CGG | - | chr1.1:20153470-20153489 | None:intergenic | 20.0% |
| !! | AGAAACATGTTTAAGTAATA+TGG | + | chr1.1:20151325-20151344 | MS.gene026313:intron | 20.0% |
| !! | ATACTTTCAAAAGTCTAATT+AGG | + | chr1.1:20151953-20151972 | MS.gene026313:intron | 20.0% |
| !! | ATATATAACACATTTGATGT+TGG | - | chr1.1:20152099-20152118 | None:intergenic | 20.0% |
| !! | ATATCAATTTGATCATGATA+TGG | - | chr1.1:20152811-20152830 | None:intergenic | 20.0% |
| !! | ATATGAATTCATCTTTGAAT+TGG | + | chr1.1:20150280-20150299 | MS.gene026313:CDS | 20.0% |
| !! | ATCATAAAACATCAATCAAA+TGG | + | chr1.1:20153325-20153344 | MS.gene026313:intron | 20.0% |
| !! | CTAAAAATTGTGTTTATAAG+TGG | - | chr1.1:20151195-20151214 | None:intergenic | 20.0% |
| !! | GCAATAGAAAATATAAAAAG+AGG | - | chr1.1:20152516-20152535 | None:intergenic | 20.0% |
| !! | TAAAAATAACAAATACTAGG+TGG | + | chr1.1:20153983-20154002 | MS.gene026313:intron | 20.0% |
| !! | TAAGAAAGTAATATCACATT+TGG | - | chr1.1:20152073-20152092 | None:intergenic | 20.0% |
| !! | TACTCCAAAATTTAATTCTA+TGG | + | chr1.1:20154763-20154782 | MS.gene026313:intron | 20.0% |
| !! | TACTTTCAAAAGTCTAATTA+GGG | + | chr1.1:20151954-20151973 | MS.gene026313:intron | 20.0% |
| !! | TGAAATTTGGAAGTTATTAT+GGG | + | chr1.1:20152208-20152227 | MS.gene026313:intron | 20.0% |
| !! | TGGAACATTAACTTTAAATA+CGG | - | chr1.1:20152791-20152810 | None:intergenic | 20.0% |
| !! | TTATACTTAATGCAATATGT+TGG | - | chr1.1:20152942-20152961 | None:intergenic | 20.0% |
| !! | TTCTTATCTTAAGTTCATAA+AGG | + | chr1.1:20151607-20151626 | MS.gene026313:intron | 20.0% |
| !! | TTGAAATTTGGAAGTTATTA+TGG | + | chr1.1:20152207-20152226 | MS.gene026313:intron | 20.0% |
| !!! | AAACAGTAAAACATAGTTTT+GGG | - | chr1.1:20154168-20154187 | None:intergenic | 20.0% |
| !!! | AATATCCATATCTATTTCTT+CGG | + | chr1.1:20155606-20155625 | MS.gene026313:intron | 20.0% |
| !!! | AATGTTTTTTATCATGTCAA+AGG | + | chr1.1:20155022-20155041 | MS.gene026313:intron | 20.0% |
| !!! | ACTTCCTATCTATTTTTTAA+GGG | - | chr1.1:20154713-20154732 | None:intergenic | 20.0% |
| !!! | AGTATTTTTCACTTTTGAAT+GGG | - | chr1.1:20152882-20152901 | None:intergenic | 20.0% |
| !!! | CACTTATAAACACAATTTTT+AGG | + | chr1.1:20151193-20151212 | MS.gene026313:intron | 20.0% |
| !!! | TAGTATTTTTCACTTTTGAA+TGG | - | chr1.1:20152883-20152902 | None:intergenic | 20.0% |
| !!! | TCAAATACTGATTTTCATTA+TGG | + | chr1.1:20150255-20150274 | MS.gene026313:CDS | 20.0% |
| !!! | TTCTAAATTTTTTCTTCTTC+AGG | + | chr1.1:20153729-20153748 | MS.gene026313:intron | 20.0% |
| ! | AACAGGTACAATAAAAACAT+AGG | - | chr1.1:20151743-20151762 | None:intergenic | 25.0% |
| ! | AAGCTGAAAAAATACAAAAC+AGG | - | chr1.1:20151760-20151779 | None:intergenic | 25.0% |
| ! | AAGTTGCATTATTATTTGGT+AGG | + | chr1.1:20155411-20155430 | MS.gene026313:intron | 25.0% |
| ! | AATTAATTGATGTGTTCTGT+AGG | + | chr1.1:20154818-20154837 | MS.gene026313:intron | 25.0% |
| ! | AGTATAATGTATAATGCATG+AGG | - | chr1.1:20155546-20155565 | None:intergenic | 25.0% |
| ! | AGTCAAATTCACAATTATTG+AGG | - | chr1.1:20154318-20154337 | None:intergenic | 25.0% |
| ! | ATAAAACATCAATCAAATGG+TGG | + | chr1.1:20153328-20153347 | MS.gene026313:intron | 25.0% |
| ! | ATAACTCATTCCTACATAAT+CGG | + | chr1.1:20151147-20151166 | MS.gene026313:intron | 25.0% |
| ! | ATTGAAGAGAATGTTATAGA+CGG | - | chr1.1:20152048-20152067 | None:intergenic | 25.0% |
| ! | CAAAAAAAGGAAAGAAAACA+AGG | - | chr1.1:20152544-20152563 | None:intergenic | 25.0% |
| ! | GAAATTTGGAAGTTATTATG+GGG | + | chr1.1:20152209-20152228 | MS.gene026313:intron | 25.0% |
| ! | GAAGCTAGGAAAATATAATT+TGG | - | chr1.1:20155509-20155528 | None:intergenic | 25.0% |
| ! | GAGTAACTAGATAAATTTGA+TGG | - | chr1.1:20155938-20155957 | None:intergenic | 25.0% |
| ! | GCATTATACATTATACTTAC+TGG | + | chr1.1:20155549-20155568 | MS.gene026313:intron | 25.0% |
| ! | GGACAAACATACATATTTAA+AGG | - | chr1.1:20155200-20155219 | None:intergenic | 25.0% |
| ! | GTACAAGTTGCATTATTATT+TGG | + | chr1.1:20155407-20155426 | MS.gene026313:intron | 25.0% |
| ! | GTTTGTAAGATCATAAATAC+TGG | + | chr1.1:20154667-20154686 | MS.gene026313:intron | 25.0% |
| ! | TAACTAGATAAATTTGATGG+TGG | - | chr1.1:20155935-20155954 | None:intergenic | 25.0% |
| ! | TAAGCCCTTAAAAAATAGAT+AGG | + | chr1.1:20154706-20154725 | MS.gene026313:intron | 25.0% |
| ! | TAGAATTGCTTGAATCAAAT+TGG | + | chr1.1:20152436-20152455 | MS.gene026313:intron | 25.0% |
| ! | TTAAAGTTTAATCTGCTAAC+TGG | + | chr1.1:20154289-20154308 | MS.gene026313:intron | 25.0% |
| ! | TTATACTGACCATTATCATA+TGG | - | chr1.1:20153862-20153881 | None:intergenic | 25.0% |
| ! | TTCATTAACAATGTCAAGTT+AGG | - | chr1.1:20155460-20155479 | None:intergenic | 25.0% |
| ! | TTCCAATTTATCTACTTTCA+AGG | + | chr1.1:20154611-20154630 | MS.gene026313:CDS | 25.0% |
| !! | AAAATTGACAACACTGTTTT+GGG | - | chr1.1:20154018-20154037 | None:intergenic | 25.0% |
| !! | ATATCCATATCTATTTCTTC+GGG | + | chr1.1:20155607-20155626 | MS.gene026313:intron | 25.0% |
| !! | CAAACAGTAAAACATAGTTT+TGG | - | chr1.1:20154169-20154188 | None:intergenic | 25.0% |
| !! | CATTCTTATCCTTTTTATCT+TGG | - | chr1.1:20152767-20152786 | None:intergenic | 25.0% |
| !! | TCATACTTGATCTTTTGAAT+TGG | + | chr1.1:20153161-20153180 | MS.gene026313:intron | 25.0% |
| !! | TCTTTTTGCAAAAAAAAGGT+AGG | + | chr1.1:20151370-20151389 | MS.gene026313:intron | 25.0% |
| !! | TGTATTTTTCTTTGCATAGA+TGG | + | chr1.1:20153894-20153913 | MS.gene026313:intron | 25.0% |
| !! | TGTCCCATAGAATTAAATTT+TGG | - | chr1.1:20154770-20154789 | None:intergenic | 25.0% |
| !! | TGTTGATGAACAGTATAAAT+TGG | + | chr1.1:20150542-20150561 | MS.gene026313:CDS | 25.0% |
| !! | TTCCAATGGGAAATTATTTT+GGG | + | chr1.1:20150355-20150374 | MS.gene026313:CDS | 25.0% |
| !! | TTTATTAGGCTTTTATGACT+GGG | - | chr1.1:20154243-20154262 | None:intergenic | 25.0% |
| !! | TTTTTATCATGTCAAAGGAA+TGG | + | chr1.1:20155027-20155046 | MS.gene026313:intron | 25.0% |
| !!! | GACTTCCTATCTATTTTTTA+AGG | - | chr1.1:20154714-20154733 | None:intergenic | 25.0% |
| !!! | GCTTAGCTTGTTTATATATT+CGG | + | chr1.1:20154909-20154928 | MS.gene026313:intron | 25.0% |
| !!! | GTATTTTTCACTTTTGAATG+GGG | - | chr1.1:20152881-20152900 | None:intergenic | 25.0% |
| AAACAATTAGCACAAAGTCA+TGG | + | chr1.1:20155742-20155761 | MS.gene026313:intron | 30.0% | |
| AACCCAAAATAATTTCCCAT+TGG | - | chr1.1:20150360-20150379 | None:intergenic | 30.0% | |
| AATAACAAGAACGACAAACA+AGG | - | chr1.1:20150597-20150616 | None:intergenic | 30.0% | |
| AGAAACATTAAGCAATGAGT+AGG | - | chr1.1:20155776-20155795 | None:intergenic | 30.0% | |
| ATATATTCGGTAGGATAGAT+AGG | + | chr1.1:20154922-20154941 | MS.gene026313:intron | 30.0% | |
| ATGATCTTACAAACAAAGAC+TGG | - | chr1.1:20154661-20154680 | None:intergenic | 30.0% | |
| CACCTTGAAAGTAGATAAAT+TGG | - | chr1.1:20154616-20154635 | None:intergenic | 30.0% | |
| CATATCTCAAAGCAAGTTTA+GGG | + | chr1.1:20151568-20151587 | MS.gene026313:intron | 30.0% | |
| CATATGAAGTGATAAGAGTT+AGG | - | chr1.1:20154426-20154445 | None:intergenic | 30.0% | |
| CATGCAATATCATTTGAATC+TGG | + | chr1.1:20150303-20150322 | MS.gene026313:CDS | 30.0% | |
| CCAAATAGAATTCGTAAACA+TGG | + | chr1.1:20151537-20151556 | MS.gene026313:intron | 30.0% | |
| CCATGTTTACGAATTCTATT+TGG | - | chr1.1:20151540-20151559 | None:intergenic | 30.0% | |
| CGTCAAACATTGATGTAAAA+TGG | - | chr1.1:20153212-20153231 | None:intergenic | 30.0% | |
| CTACTACATTGATAAGTGTA+AGG | - | chr1.1:20154887-20154906 | None:intergenic | 30.0% | |
| GGTTGAATAATGATACTTCT+GGG | + | chr1.1:20150376-20150395 | MS.gene026313:CDS | 30.0% | |
| TAAGACACACAACAAAAACT+AGG | - | chr1.1:20154471-20154490 | None:intergenic | 30.0% | |
| TAATTATCAGCAAAAACACC+TGG | - | chr1.1:20154803-20154822 | None:intergenic | 30.0% | |
| TACAACAACTCTTAGAATCT+GGG | + | chr1.1:20150903-20150922 | MS.gene026313:intron | 30.0% | |
| TCATATCTCAAAGCAAGTTT+AGG | + | chr1.1:20151567-20151586 | MS.gene026313:intron | 30.0% | |
| TGATGAACAGTATAAATTGG+AGG | + | chr1.1:20150545-20150564 | MS.gene026313:CDS | 30.0% | |
| TGATTCAGTGTTATCTAAAG+AGG | - | chr1.1:20153668-20153687 | None:intergenic | 30.0% | |
| TTTCCTATATGCATACTTTG+AGG | - | chr1.1:20152989-20153008 | None:intergenic | 30.0% | |
| ! | AGCTTGTTTATATATTCGGT+AGG | + | chr1.1:20154913-20154932 | MS.gene026313:intron | 30.0% |
| ! | ATAGGAAGGTACATGAAATT+AGG | + | chr1.1:20153082-20153101 | MS.gene026313:intron | 30.0% |
| ! | CAAAACAGTGTTGTCAATTT+TGG | + | chr1.1:20154017-20154036 | MS.gene026313:intron | 30.0% |
| ! | CAAAATTGACAACACTGTTT+TGG | - | chr1.1:20154019-20154038 | None:intergenic | 30.0% |
| ! | CTTTATTAGGCTTTTATGAC+TGG | - | chr1.1:20154244-20154263 | None:intergenic | 30.0% |
| ! | GAAAGCTTTGTCTTAAATGA+AGG | + | chr1.1:20151241-20151260 | MS.gene026313:intron | 30.0% |
| ! | GTTCCAATGGGAAATTATTT+TGG | + | chr1.1:20150354-20150373 | MS.gene026313:CDS | 30.0% |
| ! | TCAAGGTATCTTCTTAAAGA+AGG | + | chr1.1:20153364-20153383 | MS.gene026313:intron | 30.0% |
| ! | TCATTTAAGACAAAGCTTTC+AGG | - | chr1.1:20151241-20151260 | None:intergenic | 30.0% |
| ! | TTCTGGTGTTAGTTATTTCA+AGG | + | chr1.1:20151660-20151679 | MS.gene026313:intron | 30.0% |
| ! | TTGTTTGTCGTTCTTGTTAT+TGG | + | chr1.1:20150596-20150615 | MS.gene026313:intron | 30.0% |
| ! | TTTTGCAAAAAAAAGGTAGG+AGG | + | chr1.1:20151373-20151392 | MS.gene026313:intron | 30.0% |
| !! | AAGGCTCTAGATATTATGTT+AGG | - | chr1.1:20155155-20155174 | None:intergenic | 30.0% |
| !! | ATGTTGGTAGCATAATTATC+TGG | - | chr1.1:20152926-20152945 | None:intergenic | 30.0% |
| !! | TTGGTTTTTGAGGACTATTA+AGG | - | chr1.1:20151521-20151540 | None:intergenic | 30.0% |
| !! | TTTTACTTCCAATTGGTGAT+AGG | - | chr1.1:20155484-20155503 | None:intergenic | 30.0% |
| !! | TTTTTGCTGTCAAGTTTAGA+AGG | - | chr1.1:20155356-20155375 | None:intergenic | 30.0% |
| !!! | CGAATTCTATTTGGTTTTTG+AGG | - | chr1.1:20151531-20151550 | None:intergenic | 30.0% |
| !!! | CTTTTTGCTAGGAGTATTTT+AGG | - | chr1.1:20152171-20152190 | None:intergenic | 30.0% |
| !!! | TGTATTTTTTCAGCTTCTTG+AGG | + | chr1.1:20151764-20151783 | MS.gene026313:intron | 30.0% |
| !!! | TTTGGTGTTTTACTTCCAAT+TGG | - | chr1.1:20155491-20155510 | None:intergenic | 30.0% |
| AAAAGGTAGGAGGAATTGTT+TGG | + | chr1.1:20151383-20151402 | MS.gene026313:intron | 35.0% | |
| AAAAGTGGTAAGGTAAGGTA+AGG | - | chr1.1:20152858-20152877 | None:intergenic | 35.0% | |
| AAACCATGTGACAAAAAGCT+TGG | - | chr1.1:20152467-20152486 | None:intergenic | 35.0% | |
| AAAGAAGCTCAACAATAGGA+AGG | + | chr1.1:20153068-20153087 | MS.gene026313:CDS | 35.0% | |
| AAAGATGGAGGACAAACAAA+AGG | - | chr1.1:20151999-20152018 | None:intergenic | 35.0% | |
| AACAGTATAAATTGGAGGAG+GGG | + | chr1.1:20150550-20150569 | MS.gene026313:CDS | 35.0% | |
| AATGCAACTTGTACACTTTG+AGG | - | chr1.1:20155401-20155420 | None:intergenic | 35.0% | |
| ACAAAACTCTAGATGCAACT+AGG | + | chr1.1:20151435-20151454 | MS.gene026313:intron | 35.0% | |
| ACAAAGACTGGTAAAAGTGA+AGG | - | chr1.1:20154649-20154668 | None:intergenic | 35.0% | |
| ACAACGCTTTGACATTTGTA+TGG | + | chr1.1:20152392-20152411 | MS.gene026313:intron | 35.0% | |
| ACATTATAGATGTCCAGACT+TGG | - | chr1.1:20151050-20151069 | None:intergenic | 35.0% | |
| AGTTATTATGGGGTTAGGTA+TGG | + | chr1.1:20152219-20152238 | MS.gene026313:intron | 35.0% | |
| ATATCCGTCAAAAATTGGCA+TGG | - | chr1.1:20154079-20154098 | None:intergenic | 35.0% | |
| ATCGAGAGAAGTAGAATTTG+CGG | - | chr1.1:20155309-20155328 | None:intergenic | 35.0% | |
| ATTAGAAGAAGTGAAGCACA+TGG | - | chr1.1:20151799-20151818 | None:intergenic | 35.0% | |
| ATTGCATGAATGAAGTTCAC+TGG | - | chr1.1:20155332-20155351 | None:intergenic | 35.0% | |
| CAACGGATACCATATGATAA+TGG | + | chr1.1:20153850-20153869 | MS.gene026313:CDS | 35.0% | |
| CACACAACAAAAACTAGGAA+AGG | - | chr1.1:20154466-20154485 | None:intergenic | 35.0% | |
| CATATGCTCTTACACTATCT+GGG | + | chr1.1:20154440-20154459 | MS.gene026313:intron | 35.0% | |
| CATTATAGATGTCCAGACTT+GGG | - | chr1.1:20151049-20151068 | None:intergenic | 35.0% | |
| CTACAACAACTCTTAGAATC+TGG | + | chr1.1:20150902-20150921 | MS.gene026313:intron | 35.0% | |
| GAACAGTATAAATTGGAGGA+GGG | + | chr1.1:20150549-20150568 | MS.gene026313:CDS | 35.0% | |
| GAGAAAGTTAGGGAAAGTAA+AGG | - | chr1.1:20155127-20155146 | None:intergenic | 35.0% | |
| GCAATATCATTTGAATCTGG+TGG | + | chr1.1:20150306-20150325 | MS.gene026313:CDS | 35.0% | |
| GGGTTGAATAATGATACTTC+TGG | + | chr1.1:20150375-20150394 | MS.gene026313:CDS | 35.0% | |
| GTGGATAAAAATGCAGTTCA+AGG | + | chr1.1:20153347-20153366 | MS.gene026313:intron | 35.0% | |
| GTGTTATATATCCCAGATAG+CGG | + | chr1.1:20152108-20152127 | MS.gene026313:intron | 35.0% | |
| GTTTCTTCTCAATTTAGCTG+AGG | + | chr1.1:20155790-20155809 | MS.gene026313:intron | 35.0% | |
| TAACAAATACTAGGTGGAAC+TGG | + | chr1.1:20153989-20154008 | MS.gene026313:intron | 35.0% | |
| TAAGCCCGAAGAAATAGATA+TGG | - | chr1.1:20155614-20155633 | None:intergenic | 35.0% | |
| TAATCTCTGTTCGCATAACA+TGG | - | chr1.1:20155067-20155086 | None:intergenic | 35.0% | |
| TAATGAAGCCTATCACCAAT+TGG | + | chr1.1:20155473-20155492 | MS.gene026313:intron | 35.0% | |
| TAGGTTCATAGATTCAAGCA+AGG | + | chr1.1:20155430-20155449 | MS.gene026313:intron | 35.0% | |
| TATGCTCAACCCAAATTCTA+AGG | - | chr1.1:20151130-20151149 | None:intergenic | 35.0% | |
| TATGTGTTTCTTGAAGAGTC+TGG | + | chr1.1:20153114-20153133 | MS.gene026313:intron | 35.0% | |
| TCATATGCTCTTACACTATC+TGG | + | chr1.1:20154439-20154458 | MS.gene026313:intron | 35.0% | |
| TCTGTAGGAGACAAAATTGT+TGG | + | chr1.1:20154833-20154852 | MS.gene026313:intron | 35.0% | |
| TGAACAGTATAAATTGGAGG+AGG | + | chr1.1:20150548-20150567 | MS.gene026313:CDS | 35.0% | |
| TGGTAAAGAAGCTCAACAAT+AGG | + | chr1.1:20153064-20153083 | MS.gene026313:CDS | 35.0% | |
| TTACGTTTCAAACCATGAAC+AGG | + | chr1.1:20153639-20153658 | MS.gene026313:intron | 35.0% | |
| TTAGGACTGAGAGAAAGTTA+GGG | - | chr1.1:20155137-20155156 | None:intergenic | 35.0% | |
| TTGACATACCTCATGATACT+TGG | - | chr1.1:20152597-20152616 | None:intergenic | 35.0% | |
| TTGGAAGTTATTATGGGGTT+AGG | + | chr1.1:20152214-20152233 | MS.gene026313:intron | 35.0% | |
| TTGTCAATAGCATGCAATAG+CGG | - | chr1.1:20152376-20152395 | None:intergenic | 35.0% | |
| ! | AAAGGTTAAGGCTTTTTGCT+AGG | - | chr1.1:20152182-20152201 | None:intergenic | 35.0% |
| ! | GAGTCTATCTAAGATCAGTT+CGG | - | chr1.1:20151099-20151118 | None:intergenic | 35.0% |
| ! | GGAATTCAAGCGTTGTTAAT+AGG | + | chr1.1:20150415-20150434 | MS.gene026313:CDS | 35.0% |
| ! | TAGAGCCTTTTCAGTTTGAT+CGG | + | chr1.1:20155166-20155185 | MS.gene026313:intron | 35.0% |
| ! | TCGTGTCGGTAAAAATTTGA+AGG | + | chr1.1:20150721-20150740 | MS.gene026313:intron | 35.0% |
| ! | TTGTCCTCCATCTTTGTTTA+TGG | + | chr1.1:20152004-20152023 | MS.gene026313:intron | 35.0% |
| !! | AAAACTACCGATTCATGTCT+AGG | + | chr1.1:20153585-20153604 | MS.gene026313:intron | 35.0% |
| !! | AACACTGATTTAGACCTTAG+GGG | - | chr1.1:20154379-20154398 | None:intergenic | 35.0% |
| !! | AATTTTGGCAATGCGAATTG+CGG | + | chr1.1:20154032-20154051 | MS.gene026313:intron | 35.0% |
| !! | ACAACACTGATTTAGACCTT+AGG | - | chr1.1:20154381-20154400 | None:intergenic | 35.0% |
| !! | CAACACTGATTTAGACCTTA+GGG | - | chr1.1:20154380-20154399 | None:intergenic | 35.0% |
| !! | CATGATCTCCAATCACTTTT+AGG | + | chr1.1:20155227-20155246 | MS.gene026313:intron | 35.0% |
| !! | CCAATTTTTGACGGATATGA+CGG | + | chr1.1:20154081-20154100 | MS.gene026313:intron | 35.0% |
| !! | CTAGATAAATTTGATGGTGG+TGG | - | chr1.1:20155932-20155951 | None:intergenic | 35.0% |
| !! | TTCTGGGATGATGATGTATT+CGG | + | chr1.1:20150392-20150411 | MS.gene026313:CDS | 35.0% |
| !!! | AGAAGAAGGACTTTTGGAAT+CGG | - | chr1.1:20155258-20155277 | None:intergenic | 35.0% |
| AACCTATGGACAGAAGTCAA+CGG | + | chr1.1:20153833-20153852 | MS.gene026313:CDS | 40.0% | |
| ACAAAGCTTTCAGGCCAAAT+TGG | - | chr1.1:20151232-20151251 | None:intergenic | 40.0% | |
| ACAACTCTTAGAATCTGGGT+TGG | + | chr1.1:20150907-20150926 | MS.gene026313:intron | 40.0% | |
| ACCTTACAAGCCGATTATGT+AGG | - | chr1.1:20151160-20151179 | None:intergenic | 40.0% | |
| ACTGTAGTTAGACAACACTG+TGG | - | chr1.1:20151267-20151286 | None:intergenic | 40.0% | |
| ATCAGCAAAAACACCTGGAT+AGG | - | chr1.1:20154798-20154817 | None:intergenic | 40.0% | |
| ATTGAAGCATGATGCAGGTT+TGG | + | chr1.1:20150506-20150525 | MS.gene026313:CDS | 40.0% | |
| ATTGCTGCTGCATAGTAACT+TGG | + | chr1.1:20150788-20150807 | MS.gene026313:intron | 40.0% | |
| CAAAGCTTTCAGGCCAAATT+GGG | - | chr1.1:20151231-20151250 | None:intergenic | 40.0% | |
| CAGAACCGATCAAACTGAAA+AGG | - | chr1.1:20155174-20155193 | None:intergenic | 40.0% | |
| CATACTGCTTACGTTGTCAT+TGG | + | chr1.1:20155888-20155907 | MS.gene026313:intron | 40.0% | |
| CCATGAAAGAGGGCAAAAAA+AGG | - | chr1.1:20152557-20152576 | None:intergenic | 40.0% | |
| CCGTCATATCCGTCAAAAAT+TGG | - | chr1.1:20154084-20154103 | None:intergenic | 40.0% | |
| CCTTACAAACTGGTATCGTA+GGG | - | chr1.1:20150944-20150963 | None:intergenic | 40.0% | |
| CTGACATCCTAGACATGAAT+CGG | - | chr1.1:20153595-20153614 | None:intergenic | 40.0% | |
| CTGACCTCACCTTAGAATTT+GGG | + | chr1.1:20151118-20151137 | MS.gene026313:intron | 40.0% | |
| GAATCCCTCTATAATGTGCT+TGG | - | chr1.1:20152149-20152168 | None:intergenic | 40.0% | |
| GAATTCCCTTGAGCTTCTAA+AGG | + | chr1.1:20154983-20155002 | MS.gene026313:intron | 40.0% | |
| GACTCCAAGCACATTATAGA+GGG | + | chr1.1:20152142-20152161 | MS.gene026313:intron | 40.0% | |
| GATGATCAGAATCCAGAAGA+AGG | - | chr1.1:20155272-20155291 | None:intergenic | 40.0% | |
| GATTCCAAAAGTCCTTCTTC+TGG | + | chr1.1:20155257-20155276 | MS.gene026313:intron | 40.0% | |
| GATTGGAGATCATGTACTTG+AGG | - | chr1.1:20155221-20155240 | None:intergenic | 40.0% | |
| GCACCTCAAAGTATGCATAT+AGG | + | chr1.1:20152983-20153002 | MS.gene026313:intron | 40.0% | |
| GCCAAATTGGGTGAGATATA+GGG | - | chr1.1:20151219-20151238 | None:intergenic | 40.0% | |
| GCTGCATAGTAACTTGGTTT+CGG | + | chr1.1:20150794-20150813 | MS.gene026313:intron | 40.0% | |
| GGTACATGAAATTAGGAAGC+TGG | + | chr1.1:20153089-20153108 | MS.gene026313:intron | 40.0% | |
| GGTTCCATAAACAAAGATGG+AGG | - | chr1.1:20152011-20152030 | None:intergenic | 40.0% | |
| GTATGACCATACTTGTGACA+TGG | - | chr1.1:20155873-20155892 | None:intergenic | 40.0% | |
| GTTAGGACTGAGAGAAAGTT+AGG | - | chr1.1:20155138-20155157 | None:intergenic | 40.0% | |
| GTTCGTCTGTTATGAGTCAA+CGG | + | chr1.1:20150439-20150458 | MS.gene026313:CDS | 40.0% | |
| TCCTTACAAACTGGTATCGT+AGG | - | chr1.1:20150945-20150964 | None:intergenic | 40.0% | |
| TCTAAAGGATGGAGAAAGCA+AGG | + | chr1.1:20154201-20154220 | MS.gene026313:intron | 40.0% | |
| TCTGACCTCACCTTAGAATT+TGG | + | chr1.1:20151117-20151136 | MS.gene026313:intron | 40.0% | |
| TCTTCTTCAGGATAAGCCAA+TGG | + | chr1.1:20153741-20153760 | MS.gene026313:intron | 40.0% | |
| TGCGGTTCCATAAACAAAGA+TGG | - | chr1.1:20152014-20152033 | None:intergenic | 40.0% | |
| TGTCAACCATGTCACAAGTA+TGG | + | chr1.1:20155864-20155883 | MS.gene026313:intron | 40.0% | |
| TTATGCTCTTTGCGTCTTTC+TGG | + | chr1.1:20151643-20151662 | MS.gene026313:intron | 40.0% | |
| TTCGTCTGTTATGAGTCAAC+GGG | + | chr1.1:20150440-20150459 | MS.gene026313:CDS | 40.0% | |
| TTCGTGTGTATCACAACCTA+TGG | + | chr1.1:20153819-20153838 | MS.gene026313:CDS | 40.0% | |
| TTGAATGGGGAAAAGTGGTA+AGG | - | chr1.1:20152868-20152887 | None:intergenic | 40.0% | |
| TTGTGATACACACGAATACG+TGG | - | chr1.1:20153815-20153834 | None:intergenic | 40.0% | |
| ! | AAGGAAATCAGAAGAGCACA+TGG | + | chr1.1:20153044-20153063 | MS.gene026313:CDS | 40.0% |
| ! | ACTGCCATGCCAATTTTTGA+CGG | + | chr1.1:20154072-20154091 | MS.gene026313:intron | 40.0% |
| ! | AGTGCAATGAAGTACTTGAC+TGG | - | chr1.1:20155102-20155121 | None:intergenic | 40.0% |
| ! | ATGCCAAGCTTTTTGTCACA+TGG | + | chr1.1:20152461-20152480 | MS.gene026313:intron | 40.0% |
| ! | ATTCATGTCTAGGATGTCAG+TGG | + | chr1.1:20153595-20153614 | MS.gene026313:intron | 40.0% |
| ! | CACTTTTGAATGGGGAAAAG+TGG | - | chr1.1:20152873-20152892 | None:intergenic | 40.0% |
| ! | GAATCCAGAAGAAGGACTTT+TGG | - | chr1.1:20155264-20155283 | None:intergenic | 40.0% |
| ! | TAGACGGAAAAGCACATATG+CGG | - | chr1.1:20152032-20152051 | None:intergenic | 40.0% |
| ! | TCTGGGATGATGATGTATTC+GGG | + | chr1.1:20150393-20150412 | MS.gene026313:CDS | 40.0% |
| ! | TGACCAGTTGCAAGTCTTTT+GGG | + | chr1.1:20154344-20154363 | MS.gene026313:intron | 40.0% |
| ! | TTGACCAGTTGCAAGTCTTT+TGG | + | chr1.1:20154343-20154362 | MS.gene026313:intron | 40.0% |
| ! | TTTTGGGCCAATGTTATCGA+TGG | - | chr1.1:20154152-20154171 | None:intergenic | 40.0% |
| !! | AAGGGTGCTTCGTAAATGTT+TGG | - | chr1.1:20155965-20155984 | None:intergenic | 40.0% |
| !! | CTTCTTGTTGATTCTGTTCC+TGG | + | chr1.1:20150483-20150502 | MS.gene026313:CDS | 40.0% |
| !! | GATAAATTTGATGGTGGTGG+AGG | - | chr1.1:20155929-20155948 | None:intergenic | 40.0% |
| !! | TCAACCCAAATTCTAAGGTG+AGG | - | chr1.1:20151125-20151144 | None:intergenic | 40.0% |
| !! | TCCTACATAATCGGCTTGTA+AGG | + | chr1.1:20151156-20151175 | MS.gene026313:intron | 40.0% |
| !! | TGCTTTGGTGATGAAACCAT+TGG | - | chr1.1:20153760-20153779 | None:intergenic | 40.0% |
| !!! | CCTTTTTTTGCCCTCTTTCA+TGG | + | chr1.1:20152554-20152573 | MS.gene026313:intron | 40.0% |
| AGCAGAGCAGTTTCACATAG+TGG | - | chr1.1:20152303-20152322 | None:intergenic | 45.0% | |
| AGCATGTCTAGCCATGAAAG+AGG | - | chr1.1:20152568-20152587 | None:intergenic | 45.0% | |
| AGTCAACGGGAATATGTGTC+TGG | + | chr1.1:20150453-20150472 | MS.gene026313:CDS | 45.0% | |
| ATGGGACATTGTACCTATCC+AGG | + | chr1.1:20154782-20154801 | MS.gene026313:intron | 45.0% | |
| CATGGCAACTTGTCAAGTGT+GGG | + | chr1.1:20155583-20155602 | MS.gene026313:intron | 45.0% | |
| CCAATGTTATCGATGGCAGA+TGG | - | chr1.1:20154145-20154164 | None:intergenic | 45.0% | |
| CCACTATAGCGCCAAAATAG+TGG | - | chr1.1:20152265-20152284 | None:intergenic | 45.0% | |
| CCATCTGCCATCGATAACAT+TGG | + | chr1.1:20154142-20154161 | MS.gene026313:intron | 45.0% | |
| CCCTACGATACCAGTTTGTA+AGG | + | chr1.1:20150941-20150960 | MS.gene026313:intron | 45.0% | |
| CCTTCGCTTTCTCTGCAAAA+TGG | - | chr1.1:20153028-20153047 | None:intergenic | 45.0% | |
| CGACTCCAAGCACATTATAG+AGG | + | chr1.1:20152141-20152160 | MS.gene026313:intron | 45.0% | |
| CGATACCAGTTTGTAAGGAG+AGG | + | chr1.1:20150946-20150965 | MS.gene026313:intron | 45.0% | |
| CTAAAGAGGAGTCCTGTTCA+TGG | - | chr1.1:20153654-20153673 | None:intergenic | 45.0% | |
| CTACCCAAAAGACTTGCAAC+TGG | - | chr1.1:20154350-20154369 | None:intergenic | 45.0% | |
| CTGATGAGCCAAGTATCATG+AGG | + | chr1.1:20152586-20152605 | MS.gene026313:CDS | 45.0% | |
| GCATGTCTAGCCATGAAAGA+GGG | - | chr1.1:20152567-20152586 | None:intergenic | 45.0% | |
| GCCCTATATCTCACCCAATT+TGG | + | chr1.1:20151215-20151234 | MS.gene026313:intron | 45.0% | |
| GGAGAACTAGAAATGCAGCA+AGG | - | chr1.1:20151722-20151741 | None:intergenic | 45.0% | |
| GGCCAAATTGGGTGAGATAT+AGG | - | chr1.1:20151220-20151239 | None:intergenic | 45.0% | |
| GTAGTCCTCTCCTTACAAAC+TGG | - | chr1.1:20150954-20150973 | None:intergenic | 45.0% | |
| TAACCCGCTATCAGCTTACT+CGG | - | chr1.1:20151076-20151095 | None:intergenic | 45.0% | |
| TAATGCATGAGGCTGCATAC+AGG | - | chr1.1:20155535-20155554 | None:intergenic | 45.0% | |
| TATAGTGGCTGCTAATGCTG+TGG | + | chr1.1:20152277-20152296 | MS.gene026313:intron | 45.0% | |
| TCATGGCAACTTGTCAAGTG+TGG | + | chr1.1:20155582-20155601 | MS.gene026313:intron | 45.0% | |
| TGGGGAAAAGTGGTAAGGTA+AGG | - | chr1.1:20152863-20152882 | None:intergenic | 45.0% | |
| TGGTATCGTAGGGTTGAGTT+AGG | - | chr1.1:20150934-20150953 | None:intergenic | 45.0% | |
| TGTAACCACATGTGTCGTGT+CGG | + | chr1.1:20150707-20150726 | MS.gene026313:intron | 45.0% | |
| TTGCCTGAGATGGTTCCAAT+GGG | + | chr1.1:20150342-20150361 | MS.gene026313:CDS | 45.0% | |
| TTTAGCTGAGGATGTGAACG+TGG | + | chr1.1:20155802-20155821 | MS.gene026313:intron | 45.0% | |
| TTTCCCATTGGAACCATCTC+AGG | - | chr1.1:20150348-20150367 | None:intergenic | 45.0% | |
| ! | AGTGAGCCTTTAGAAGCTCA+AGG | - | chr1.1:20154992-20155011 | None:intergenic | 45.0% |
| ! | CCATTTTGCAGAGAAAGCGA+AGG | + | chr1.1:20153025-20153044 | MS.gene026313:intron | 45.0% |
| ! | CTGGGATGATGATGTATTCG+GGG | + | chr1.1:20150394-20150413 | MS.gene026313:CDS | 45.0% |
| ! | GTGAGCCTTTAGAAGCTCAA+GGG | - | chr1.1:20154991-20155010 | None:intergenic | 45.0% |
| ! | TGTTAGTAGCTTGCCTGAGA+TGG | + | chr1.1:20150332-20150351 | MS.gene026313:CDS | 45.0% |
| ! | TTTGAAGGCATGTCTGACAC+TGG | + | chr1.1:20150736-20150755 | MS.gene026313:intron | 45.0% |
| ! | TTTTACCGACACGACACATG+TGG | - | chr1.1:20150715-20150734 | None:intergenic | 45.0% |
| !! | ATCCGTTGACTTCTGTCCAT+AGG | - | chr1.1:20153838-20153857 | None:intergenic | 45.0% |
| !! | ATGTTGCTTTGAGGTGTAGG+TGG | + | chr1.1:20152652-20152671 | MS.gene026313:CDS | 45.0% |
| !! | CAGTTGCAAGTCTTTTGGGT+AGG | + | chr1.1:20154348-20154367 | MS.gene026313:intron | 45.0% |
| !! | CATAATCGGCTTGTAAGGTG+AGG | + | chr1.1:20151161-20151180 | MS.gene026313:intron | 45.0% |
| !! | CTGTTCGTGATGTTGCTTTG+AGG | + | chr1.1:20152643-20152662 | MS.gene026313:CDS | 45.0% |
| !! | GTGATGTTGCTTTGAGGTGT+AGG | + | chr1.1:20152649-20152668 | MS.gene026313:CDS | 45.0% |
| !!! | CCACTATTTTGGCGCTATAG+TGG | + | chr1.1:20152262-20152281 | MS.gene026313:intron | 45.0% |
| AACCCGCTATCAGCTTACTC+GGG | - | chr1.1:20151075-20151094 | None:intergenic | 50.0% | |
| AACTACCTGCTGTGTCGAAG+TGG | + | chr1.1:20155374-20155393 | MS.gene026313:intron | 50.0% | |
| ACGAATACGTGGCCACACTT+GGG | - | chr1.1:20153804-20153823 | None:intergenic | 50.0% | |
| ACGGATATGACGGCGTCATA+TGG | + | chr1.1:20154091-20154110 | MS.gene026313:intron | 50.0% | |
| ACTCTTCTCAAGCCCAAGTC+TGG | + | chr1.1:20151034-20151053 | MS.gene026313:intron | 50.0% | |
| ACTGGCTGCATACACTGCTT+TGG | - | chr1.1:20153775-20153794 | None:intergenic | 50.0% | |
| CCTGCATCATGCTTCAATCC+AGG | - | chr1.1:20150504-20150523 | None:intergenic | 50.0% | |
| CCTGGATTGAAGCATGATGC+AGG | + | chr1.1:20150501-20150520 | MS.gene026313:CDS | 50.0% | |
| CGGCGTAGCCTAAAAGTGAT+TGG | - | chr1.1:20155238-20155257 | None:intergenic | 50.0% | |
| CTGCATACAGGAGAGAAGCT+AGG | - | chr1.1:20155523-20155542 | None:intergenic | 50.0% | |
| CTTGCCTGAGATGGTTCCAA+TGG | + | chr1.1:20150341-20150360 | MS.gene026313:CDS | 50.0% | |
| GACCACTTCTTCCGCTATCT+GGG | - | chr1.1:20152122-20152141 | None:intergenic | 50.0% | |
| GATATGACGGCGTCATATGG+CGG | + | chr1.1:20154094-20154113 | MS.gene026313:intron | 50.0% | |
| TGACCCGAGTAAGCTGATAG+CGG | + | chr1.1:20151069-20151088 | MS.gene026313:intron | 50.0% | |
| TGCTACAGCATGTCCTGTAG+AGG | + | chr1.1:20152319-20152338 | MS.gene026313:intron | 50.0% | |
| TTACTGGATGCACTCGCTCA+TGG | + | chr1.1:20155565-20155584 | MS.gene026313:intron | 50.0% | |
| TTGCTCCAAGAGTCGCTTCA+CGG | - | chr1.1:20154565-20154584 | None:intergenic | 50.0% | |
| TTTGGCAATGCGAATTGCGG+TGG | + | chr1.1:20154035-20154054 | MS.gene026313:intron | 50.0% | |
| ! | AGCTGCGGCATCCACTATTT+TGG | + | chr1.1:20152251-20152270 | MS.gene026313:intron | 50.0% |
| !! | ATCCCAGATAGCGGAAGAAG+TGG | + | chr1.1:20152117-20152136 | MS.gene026313:intron | 50.0% |
| !! | GCAAGTCTTTTGGGTAGGCT+AGG | + | chr1.1:20154353-20154372 | MS.gene026313:intron | 50.0% |
| AGCATGTCCTGTAGAGGCCA+GGG | + | chr1.1:20152325-20152344 | MS.gene026313:intron | 55.0% | |
| ATGCAGGTTTGGCTGCTGAG+TGG | + | chr1.1:20150517-20150536 | MS.gene026313:CDS | 55.0% | |
| CACGAATACGTGGCCACACT+TGG | - | chr1.1:20153805-20153824 | None:intergenic | 55.0% | |
| CGAATACGTGGCCACACTTG+GGG | - | chr1.1:20153803-20153822 | None:intergenic | 55.0% | |
| CGACCACTTCTTCCGCTATC+TGG | - | chr1.1:20152123-20152142 | None:intergenic | 55.0% | |
| GACCCGAGTAAGCTGATAGC+GGG | + | chr1.1:20151070-20151089 | MS.gene026313:intron | 55.0% | |
| GCCACACTTGGGGTTAGAAC+TGG | - | chr1.1:20153793-20153812 | None:intergenic | 55.0% | |
| GTATGGCACTGTAGCAGCTG+CGG | + | chr1.1:20152236-20152255 | MS.gene026313:intron | 55.0% | |
| TGAGGATGTGAACGTGGCTG+CGG | + | chr1.1:20155808-20155827 | MS.gene026313:intron | 55.0% | |
| TGATCCCGTGAAGCGACTCT+TGG | + | chr1.1:20154557-20154576 | MS.gene026313:CDS | 55.0% | |
| TGCTCCAAGAGTCGCTTCAC+GGG | - | chr1.1:20154564-20154583 | None:intergenic | 55.0% | |
| ! | ATAGCGGAGCTATAGCGCTG+TGG | - | chr1.1:20152360-20152379 | None:intergenic | 55.0% |
| ! | GCCAGTTCTAACCCCAAGTG+TGG | + | chr1.1:20153789-20153808 | MS.gene026313:CDS | 55.0% |
| !!! | GGACTTTTGGCTTTCCGCCA+TGG | + | chr1.1:20154115-20154134 | MS.gene026313:intron | 55.0% |
| !!! | GGCGTCATATGGCGGACTTT+TGG | + | chr1.1:20154102-20154121 | MS.gene026313:intron | 55.0% |
| CAGCATGTCCTGTAGAGGCC+AGG | + | chr1.1:20152324-20152343 | MS.gene026313:intron | 60.0% | |
| CGATGGCAGATGGCAGACCA+TGG | - | chr1.1:20154135-20154154 | None:intergenic | 60.0% | |
| GAGGACCACTTCGACACAGC+AGG | - | chr1.1:20155382-20155401 | None:intergenic | 60.0% | |
| GCATGTCCTGTAGAGGCCAG+GGG | + | chr1.1:20152326-20152345 | MS.gene026313:intron | 60.0% | |
| TGGCAGATGGCAGACCATGG+CGG | - | chr1.1:20154132-20154151 | None:intergenic | 60.0% | |
| TTGGGTAGGCTAGGCCCCTA+AGG | + | chr1.1:20154362-20154381 | MS.gene026313:intron | 60.0% | |
| CGGCAGAGGTCATGGTCAGG+TGG | + | chr1.1:20155828-20155847 | MS.gene026313:intron | 65.0% | |
| CTGCGGCAGAGGTCATGGTC+AGG | + | chr1.1:20155825-20155844 | MS.gene026313:intron | 65.0% | |
| TGTGAACGTGGCTGCGGCAG+AGG | + | chr1.1:20155814-20155833 | MS.gene026313:intron | 65.0% | |
| CGCTGTGGTTGAGCGACCCC+TGG | - | chr1.1:20152345-20152364 | None:intergenic | 70.0% | |
| CGTGGCTGCGGCAGAGGTCA+TGG | + | chr1.1:20155820-20155839 | MS.gene026313:intron | 70.0% | |
| GAGCGACCCCTGGCCTCTAC+AGG | - | chr1.1:20152335-20152354 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 20150243 | 20155985 | 20150243 | ID=MS.gene026313 |
| chr1.1 | mRNA | 20150243 | 20155985 | 20150243 | ID=MS.gene026313.t1;Parent=MS.gene026313 |
| chr1.1 | exon | 20150243 | 20150580 | 20150243 | ID=MS.gene026313.t1.exon1;Parent=MS.gene026313.t1 |
| chr1.1 | CDS | 20150243 | 20150580 | 20150243 | ID=cds.MS.gene026313.t1;Parent=MS.gene026313.t1 |
| chr1.1 | exon | 20152581 | 20152680 | 20152581 | ID=MS.gene026313.t1.exon2;Parent=MS.gene026313.t1 |
| chr1.1 | CDS | 20152581 | 20152680 | 20152581 | ID=cds.MS.gene026313.t1;Parent=MS.gene026313.t1 |
| chr1.1 | exon | 20153036 | 20153089 | 20153036 | ID=MS.gene026313.t1.exon3;Parent=MS.gene026313.t1 |
| chr1.1 | CDS | 20153036 | 20153089 | 20153036 | ID=cds.MS.gene026313.t1;Parent=MS.gene026313.t1 |
| chr1.1 | exon | 20153751 | 20153871 | 20153751 | ID=MS.gene026313.t1.exon4;Parent=MS.gene026313.t1 |
| chr1.1 | CDS | 20153751 | 20153871 | 20153751 | ID=cds.MS.gene026313.t1;Parent=MS.gene026313.t1 |
| chr1.1 | exon | 20154550 | 20154632 | 20154550 | ID=MS.gene026313.t1.exon5;Parent=MS.gene026313.t1 |
| chr1.1 | CDS | 20154550 | 20154632 | 20154550 | ID=cds.MS.gene026313.t1;Parent=MS.gene026313.t1 |
| chr1.1 | exon | 20155952 | 20155985 | 20155952 | ID=MS.gene026313.t1.exon6;Parent=MS.gene026313.t1 |
| chr1.1 | CDS | 20155952 | 20155985 | 20155952 | ID=cds.MS.gene026313.t1;Parent=MS.gene026313.t1 |
| Gene Sequence |
| Protein sequence |
