Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85263.t1 | XP_013465461.1 | 98.3 | 241 | 4 | 0 | 1 | 241 | 1 | 241 | 7.90E-125 | 456.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85263.t1 | A0A072VD21 | 98.3 | 241 | 4 | 0 | 1 | 241 | 1 | 241 | 5.7e-125 | 456.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene85263.t1 | TF | MYB-related |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene85263 | MS.gene067187 | PPI |
MS.gene90961 | MS.gene85263 | PPI |
MS.gene85263 | MS.gene52093 | PPI |
MS.gene85263 | MS.gene026313 | PPI |
MS.gene85263 | MS.gene057726 | PPI |
MS.gene85263 | MS.gene003505 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85263.t1 | MTR_2g099155 | 98.340 | 241 | 4 | 0 | 1 | 241 | 1 | 241 | 3.05e-178 | 489 |
MS.gene85263.t1 | MTR_2g099155 | 94.024 | 251 | 5 | 1 | 1 | 241 | 1 | 251 | 2.16e-174 | 479 |
MS.gene85263.t1 | MTR_4g074120 | 45.918 | 196 | 102 | 2 | 39 | 233 | 89 | 281 | 3.67e-57 | 183 |
MS.gene85263.t1 | MTR_1g035700 | 45.178 | 197 | 100 | 4 | 39 | 232 | 89 | 280 | 1.84e-49 | 164 |
MS.gene85263.t1 | MTR_1g035700 | 45.178 | 197 | 100 | 4 | 39 | 232 | 89 | 280 | 5.71e-49 | 164 |
MS.gene85263.t1 | MTR_1g035700 | 43.350 | 203 | 102 | 4 | 39 | 232 | 89 | 287 | 6.08e-48 | 160 |
MS.gene85263.t1 | MTR_4g074120 | 43.275 | 171 | 93 | 2 | 39 | 208 | 89 | 256 | 6.27e-43 | 146 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85263.t1 | AT3G07565 | 64.286 | 196 | 68 | 2 | 39 | 233 | 56 | 250 | 2.05e-91 | 270 |
MS.gene85263.t1 | AT3G07565 | 63.959 | 197 | 68 | 3 | 39 | 233 | 56 | 251 | 1.18e-89 | 265 |
MS.gene85263.t1 | AT3G07565 | 61.165 | 206 | 68 | 4 | 39 | 233 | 56 | 260 | 9.78e-87 | 258 |
MS.gene85263.t1 | AT3G07565 | 62.810 | 121 | 43 | 2 | 39 | 158 | 56 | 175 | 1.57e-49 | 161 |
MS.gene85263.t1 | AT1G60670 | 36.818 | 220 | 122 | 5 | 23 | 232 | 19 | 231 | 4.63e-41 | 141 |
MS.gene85263.t1 | AT1G60670 | 36.818 | 220 | 122 | 5 | 23 | 232 | 19 | 231 | 5.21e-41 | 141 |
MS.gene85263.t1 | AT1G10820 | 37.500 | 208 | 120 | 4 | 30 | 235 | 13 | 212 | 5.41e-41 | 140 |
MS.gene85263.t1 | AT1G10820 | 37.019 | 208 | 121 | 3 | 30 | 235 | 39 | 238 | 6.10e-41 | 141 |
MS.gene85263.t1 | AT1G60670 | 36.364 | 220 | 118 | 5 | 23 | 232 | 19 | 226 | 4.35e-40 | 139 |
MS.gene85263.t1 | AT1G60670 | 36.735 | 196 | 107 | 5 | 23 | 208 | 19 | 207 | 3.69e-32 | 117 |
MS.gene85263.t1 | AT1G60670 | 36.686 | 169 | 90 | 5 | 23 | 181 | 19 | 180 | 1.96e-25 | 99.4 |
MS.gene85263.t1 | AT1G68160 | 34.197 | 193 | 119 | 3 | 39 | 228 | 70 | 257 | 4.07e-23 | 95.1 |
MS.gene85263.t1 | AT2G43470 | 31.818 | 220 | 124 | 7 | 22 | 236 | 6 | 204 | 3.02e-21 | 88.6 |
Find 62 sgRNAs with CRISPR-Local
Find 412 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGGAAAGGTTTGCAGAGATT+TGG | 0.261482 | 2.4:-4948109 | None:intergenic |
TATAGAGATTAACCTGAATA+AGG | 0.265978 | 2.4:-4947837 | None:intergenic |
TCGAGAATGGATTGTTCTTC+AGG | 0.267802 | 2.4:-4943078 | None:intergenic |
GATGATGGCATCCCTTATTC+AGG | 0.308846 | 2.4:+4947825 | MS.gene85263:CDS |
GGAAAGGTTTGCAGAGATTT+GGG | 0.332027 | 2.4:-4948108 | None:intergenic |
TAGGTTATGGCGAACCCTTC+TGG | 0.336467 | 2.4:+4942922 | None:intergenic |
ACAAGACCTGAAGAGGTTTC+AGG | 0.340002 | 2.4:-4943012 | None:intergenic |
GAGAGGTGTTCCTGGGAGTA+TGG | 0.344621 | 2.4:-4949229 | None:intergenic |
TCCGTTCCTGAAACCTCTTC+AGG | 0.347567 | 2.4:+4943006 | MS.gene85263:CDS |
TGCGCCACCAATGATTACTA+TGG | 0.371818 | 2.4:+4947797 | MS.gene85263:CDS |
TGATGATGTTGTCCCTAGTT+TGG | 0.384182 | 2.4:-4948898 | None:intergenic |
GTAATCATTGGTGGCGCATA+TGG | 0.406796 | 2.4:-4947792 | None:intergenic |
CGAGAATGGATTGTTCTTCA+GGG | 0.417587 | 2.4:-4943077 | None:intergenic |
TGAGGATGGAGAGGTGTTCC+TGG | 0.420236 | 2.4:-4949237 | None:intergenic |
ATGGCGAACCCTTCTGGTAC+TGG | 0.425393 | 2.4:+4942928 | MS.gene85263:CDS |
TGCAAACCTTTCCTCTCTCC+AGG | 0.433697 | 2.4:+4948118 | MS.gene85263:CDS |
TGTCCCTAGTTTGGCACAAA+AGG | 0.448804 | 2.4:-4948889 | None:intergenic |
AGCTCTTCATTCATCTTCAC+TGG | 0.451576 | 2.4:-4949198 | None:intergenic |
GAACAATCCATTCTCGAAGA+TGG | 0.453682 | 2.4:+4943084 | MS.gene85263:CDS |
GGCGAGTCCATCTTCGAGAA+TGG | 0.457858 | 2.4:-4943091 | None:intergenic |
AGCTAAATAACAAGACAGTC+CGG | 0.470131 | 2.4:+4945265 | MS.gene85263:CDS |
TCATTCATCTTCACTGGAAG+AGG | 0.470717 | 2.4:-4949192 | None:intergenic |
GGCATTTGCTTCATCACCGC+TGG | 0.470801 | 2.4:-4949168 | None:intergenic |
ATCCTGGCATATCTCTTGAT+TGG | 0.473143 | 2.4:+4943052 | MS.gene85263:CDS |
GGGATGTGGCACTACGTGTC+AGG | 0.479331 | 2.4:+4945286 | MS.gene85263:CDS |
TGGCGCATATGGAGGGACAC+TGG | 0.491577 | 2.4:-4947781 | None:intergenic |
GGCGCATATGGAGGGACACT+GGG | 0.494739 | 2.4:-4947780 | None:intergenic |
ATAGAGATTAACCTGAATAA+GGG | 0.495423 | 2.4:-4947836 | None:intergenic |
GTTTGCAGAGATTTGGGTCA+TGG | 0.508018 | 2.4:-4948102 | None:intergenic |
TCATTGTCCATAGTAATCAT+TGG | 0.509412 | 2.4:-4947804 | None:intergenic |
TGTTCCTGGGAGTATGGAAC+GGG | 0.524742 | 2.4:-4949223 | None:intergenic |
GAATTGCCGTTAAAAGAAGA+AGG | 0.528190 | 2.4:-4942985 | None:intergenic |
ATCATTGGTGGCGCATATGG+AGG | 0.535761 | 2.4:-4947789 | None:intergenic |
AGAAAGAAAACAGCAAGAGA+AGG | 0.541934 | 2.4:+4946199 | MS.gene85263:CDS |
GTTCATGACAAGACCTGAAG+AGG | 0.548014 | 2.4:-4943019 | None:intergenic |
TTCATCTTCACTGGAAGAGG+CGG | 0.554591 | 2.4:-4949189 | None:intergenic |
ATGAACATGAAGCATAATCC+TGG | 0.559962 | 2.4:+4943036 | MS.gene85263:CDS |
GAGGATGGAGAGGTGTTCCT+GGG | 0.560302 | 2.4:-4949236 | None:intergenic |
AGAAAACAGCAAGAGAAGGA+AGG | 0.565104 | 2.4:+4946203 | MS.gene85263:CDS |
TAACAAGACAGTCCGGGATG+TGG | 0.565990 | 2.4:+4945272 | MS.gene85263:CDS |
ATTACTATGGACAATGATGA+TGG | 0.578059 | 2.4:+4947810 | MS.gene85263:CDS |
ACCTGAAGAGGTTTCAGGAA+CGG | 0.587306 | 2.4:-4943007 | None:intergenic |
CTGTCCCGTTCCATACTCCC+AGG | 0.588528 | 2.4:+4949219 | MS.gene85263:CDS |
GAGAATGGATTGTTCTTCAG+GGG | 0.594056 | 2.4:-4943076 | None:intergenic |
TCATCAAGAACAACATACTC+AGG | 0.599029 | 2.4:+4942957 | MS.gene85263:CDS |
TCATTGGTGGCGCATATGGA+GGG | 0.599262 | 2.4:-4947788 | None:intergenic |
GCGCACGATGTTAGATTCTG+AGG | 0.600294 | 2.4:-4945223 | None:intergenic |
GCTAAATAACAAGACAGTCC+GGG | 0.602112 | 2.4:+4945266 | MS.gene85263:CDS |
GTGTTCCTGGGAGTATGGAA+CGG | 0.607968 | 2.4:-4949224 | None:intergenic |
TTGTCCATAGTAATCATTGG+TGG | 0.612471 | 2.4:-4947801 | None:intergenic |
GACCAATCAAGAGATATGCC+AGG | 0.613497 | 2.4:-4943054 | None:intergenic |
CTGCTCTAATAGCTCAGCAG+TGG | 0.615347 | 2.4:-4948069 | None:intergenic |
TGCTCTAATAGCTCAGCAGT+GGG | 0.617093 | 2.4:-4948068 | None:intergenic |
CATCATGACTGAGGATGGAG+AGG | 0.625694 | 2.4:-4949246 | None:intergenic |
TGACACGTAGTGCCACATCC+CGG | 0.630734 | 2.4:-4945284 | None:intergenic |
TGATTACCACCAGTACCAGA+AGG | 0.632355 | 2.4:-4942937 | None:intergenic |
TTGTCAACACACCTGGAGAG+AGG | 0.651066 | 2.4:-4948129 | None:intergenic |
ATGTGGCACTACGTGTCAGG+TGG | 0.654900 | 2.4:+4945289 | MS.gene85263:CDS |
GCGAACCCTTCTGGTACTGG+TGG | 0.657804 | 2.4:+4942931 | MS.gene85263:CDS |
GATTACCACCAGTACCAGAA+GGG | 0.663106 | 2.4:-4942936 | None:intergenic |
AACACACCTGGAGAGAGGAA+AGG | 0.663481 | 2.4:-4948124 | None:intergenic |
CAGGATGAATGATTCACCAG+CGG | 0.722993 | 2.4:+4949152 | MS.gene85263:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATACATAATATATAGAATTA+TGG | + | chr2.4:4943826-4943845 | MS.gene85263:intron | 10.0% |
!! | ATTAAACCAATTTAATAAAT+TGG | - | chr2.4:4943501-4943520 | None:intergenic | 10.0% |
!! | GAAATAACAAAAAAAAATAT+AGG | - | chr2.4:4948838-4948857 | None:intergenic | 10.0% |
!! | TAAAATATAAAGTTTGATAT+TGG | + | chr2.4:4944409-4944428 | MS.gene85263:intron | 10.0% |
!! | TACATAATATATAGAATTAT+GGG | + | chr2.4:4943827-4943846 | MS.gene85263:intron | 10.0% |
!! | TATACAAATTTAAAAAAATG+GGG | - | chr2.4:4944376-4944395 | None:intergenic | 10.0% |
!!! | TATTTTTATGCAATATATAA+TGG | + | chr2.4:4943130-4943149 | MS.gene85263:intron | 10.0% |
!!! | TCATATTTTAAATTAAGTAT+GGG | - | chr2.4:4946090-4946109 | None:intergenic | 10.0% |
!!! | TTATTTAAGTGTAATTTTTA+AGG | + | chr2.4:4943429-4943448 | MS.gene85263:intron | 10.0% |
!!! | TTCATATTTTAAATTAAGTA+TGG | - | chr2.4:4946091-4946110 | None:intergenic | 10.0% |
!!! | TTCTATGTTATAATTTTTTT+TGG | + | chr2.4:4945649-4945668 | MS.gene85263:intron | 10.0% |
!!! | TTGTTGATTATATAAAATTT+AGG | + | chr2.4:4943217-4943236 | MS.gene85263:intron | 10.0% |
!!! | TTTAAAAATGAAACTTTTAT+AGG | - | chr2.4:4947049-4947068 | None:intergenic | 10.0% |
!! | AAAACTTATTTGCTTTATAT+TGG | + | chr2.4:4943978-4943997 | MS.gene85263:intron | 15.0% |
!! | AATAAGATATTAAATGACTA+AGG | - | chr2.4:4947183-4947202 | None:intergenic | 15.0% |
!! | ACATAATATATAGAATTATG+GGG | + | chr2.4:4943828-4943847 | MS.gene85263:intron | 15.0% |
!! | ACTTAACCAATTTATTAAAT+TGG | + | chr2.4:4943492-4943511 | MS.gene85263:intron | 15.0% |
!! | ATTAATTACTATCAAGATTA+AGG | - | chr2.4:4948253-4948272 | None:intergenic | 15.0% |
!! | TATATCTGTAAAATTCTATA+AGG | + | chr2.4:4945151-4945170 | MS.gene85263:intron | 15.0% |
!! | TTAATTACTATCAAGATTAA+GGG | - | chr2.4:4948252-4948271 | None:intergenic | 15.0% |
!!! | AAAACTCTATTTTTATTTTC+AGG | + | chr2.4:4947710-4947729 | MS.gene85263:intron | 15.0% |
!!! | AATATATAATGGAATTATCA+TGG | + | chr2.4:4943141-4943160 | MS.gene85263:intron | 15.0% |
!!! | AATTTTGTGCATTTAATTAT+TGG | - | chr2.4:4946853-4946872 | None:intergenic | 15.0% |
!!! | ACTTCTCTTATTATTTTTTT+CGG | + | chr2.4:4947989-4948008 | MS.gene85263:intron | 15.0% |
!!! | ATTTTAGCTAATTATTATAC+AGG | - | chr2.4:4944645-4944664 | None:intergenic | 15.0% |
!!! | CATATTTTAAATTAAGTATG+GGG | - | chr2.4:4946089-4946108 | None:intergenic | 15.0% |
!!! | TATCAAACTTTATATTTTAG+TGG | - | chr2.4:4944408-4944427 | None:intergenic | 15.0% |
!!! | TGAAAATAAAAATAGAGTTT+TGG | - | chr2.4:4947711-4947730 | None:intergenic | 15.0% |
!!! | TTTTTTTTGTTAAAAAGTAC+AGG | + | chr2.4:4944509-4944528 | MS.gene85263:intron | 15.0% |
!! | AAATAGAAAATTGACATACT+TGG | - | chr2.4:4943115-4943134 | None:intergenic | 20.0% |
!! | ACGAAAAAGTAAAGATAAAA+AGG | + | chr2.4:4946242-4946261 | MS.gene85263:CDS | 20.0% |
!! | AGAAAAGCTTAGTTAAAATT+AGG | - | chr2.4:4946939-4946958 | None:intergenic | 20.0% |
!! | CAAATACATATATAATCAGT+CGG | - | chr2.4:4948222-4948241 | None:intergenic | 20.0% |
!! | CTAAAAATCATAAAAATTGG+AGG | + | chr2.4:4943864-4943883 | MS.gene85263:intron | 20.0% |
!! | GAAAAGCTTAGTTAAAATTA+GGG | - | chr2.4:4946938-4946957 | None:intergenic | 20.0% |
!! | GGACTAAAAATCATAAAAAT+TGG | + | chr2.4:4943861-4943880 | MS.gene85263:intron | 20.0% |
!! | GTAAAAAACATTCCAATAAA+AGG | + | chr2.4:4944126-4944145 | MS.gene85263:intron | 20.0% |
!! | TAAAATAAACAAGTTAACCA+GGG | + | chr2.4:4944048-4944067 | MS.gene85263:intron | 20.0% |
!! | TAAATATATCCACCTAATAT+TGG | + | chr2.4:4945624-4945643 | MS.gene85263:intron | 20.0% |
!! | TATTTGCTTTATATTGGATT+TGG | + | chr2.4:4943984-4944003 | MS.gene85263:intron | 20.0% |
!! | TCGTAAGAATGTTTAATATA+TGG | - | chr2.4:4946276-4946295 | None:intergenic | 20.0% |
!! | TGTTAAATAAGTAAGCATAT+GGG | + | chr2.4:4947536-4947555 | MS.gene85263:intron | 20.0% |
!! | TTAAAAAGTGACACTTAAAA+AGG | - | chr2.4:4947095-4947114 | None:intergenic | 20.0% |
!! | TTAAAATAAACAAGTTAACC+AGG | + | chr2.4:4944047-4944066 | MS.gene85263:intron | 20.0% |
!! | TTAACAAATCAAAAGAAATG+AGG | - | chr2.4:4947522-4947541 | None:intergenic | 20.0% |
!! | TTACAAGATCTAGAAAATAT+AGG | - | chr2.4:4946980-4946999 | None:intergenic | 20.0% |
!! | TTCTAACTTTATGTTAAAGT+AGG | - | chr2.4:4949059-4949078 | None:intergenic | 20.0% |
!! | TTGTTAAATAAGTAAGCATA+TGG | + | chr2.4:4947535-4947554 | MS.gene85263:intron | 20.0% |
!! | TTTATTCATTCATTAAATGG+TGG | + | chr2.4:4946035-4946054 | MS.gene85263:intron | 20.0% |
!!! | AAATATGTCAAAATTTTAGG+TGG | - | chr2.4:4946690-4946709 | None:intergenic | 20.0% |
!!! | AAGAAAATGTTTCCATTTTT+GGG | + | chr2.4:4946874-4946893 | MS.gene85263:intron | 20.0% |
!!! | AAGTGTAATTTTTAAGGTTT+TGG | + | chr2.4:4943435-4943454 | MS.gene85263:intron | 20.0% |
!!! | AATTTCAAAATTTCTTTTGC+AGG | + | chr2.4:4945196-4945215 | MS.gene85263:intron | 20.0% |
!!! | AATTTTAACTAAGCTTTTCT+TGG | + | chr2.4:4946939-4946958 | MS.gene85263:intron | 20.0% |
!!! | ATCAGCTTCAATAATTTTAA+GGG | + | chr2.4:4946733-4946752 | MS.gene85263:intron | 20.0% |
!!! | ATTTTTGTCGTATATAATCA+CGG | + | chr2.4:4943462-4943481 | MS.gene85263:intron | 20.0% |
!!! | CTATTTTTATTTTCAGGAAA+GGG | + | chr2.4:4947716-4947735 | MS.gene85263:intron | 20.0% |
!!! | GCAAAATCTTCATTTTTAAT+AGG | - | chr2.4:4944681-4944700 | None:intergenic | 20.0% |
!!! | GTCAAATATGTCAAAATTTT+AGG | - | chr2.4:4946693-4946712 | None:intergenic | 20.0% |
!!! | GTTTTTTTTTTCTTTCTTTC+TGG | + | chr2.4:4945734-4945753 | MS.gene85263:intron | 20.0% |
!!! | TAAGAAAATGTTTCCATTTT+TGG | + | chr2.4:4946873-4946892 | MS.gene85263:intron | 20.0% |
!!! | TATCAGCTTCAATAATTTTA+AGG | + | chr2.4:4946732-4946751 | MS.gene85263:intron | 20.0% |
!!! | TCTATTTTTATTTTCAGGAA+AGG | + | chr2.4:4947715-4947734 | MS.gene85263:intron | 20.0% |
!!! | TGATTTTTAGTCCTAAATTT+AGG | - | chr2.4:4943854-4943873 | None:intergenic | 20.0% |
!!! | TGCTTTATTCATTCATTAAA+TGG | + | chr2.4:4946032-4946051 | MS.gene85263:intron | 20.0% |
!!! | TGTAAAAGTGTTTGATAATT+AGG | + | chr2.4:4946995-4947014 | MS.gene85263:intron | 20.0% |
!!! | TTCATTTTAAGATGAAAAGA+TGG | - | chr2.4:4945916-4945935 | None:intergenic | 20.0% |
! | AAAATAAACAAGTTAACCAG+GGG | + | chr2.4:4944049-4944068 | MS.gene85263:intron | 25.0% |
! | AACATAATAACACAAGGATA+AGG | - | chr2.4:4946565-4946584 | None:intergenic | 25.0% |
! | AAGACTTAAGTCATGATTTA+GGG | + | chr2.4:4943298-4943317 | MS.gene85263:intron | 25.0% |
! | AATAGCTGAAACAGTATTTA+TGG | + | chr2.4:4948430-4948449 | MS.gene85263:intron | 25.0% |
! | ACAATGAAATAAATGCCATA+AGG | - | chr2.4:4945343-4945362 | None:intergenic | 25.0% |
! | ACTTTATGTTAAAGTAGGAA+AGG | - | chr2.4:4949054-4949073 | None:intergenic | 25.0% |
! | ATAGAGATTAACCTGAATAA+GGG | - | chr2.4:4947839-4947858 | None:intergenic | 25.0% |
! | ATATTAGATATGTCATTGCA+TGG | + | chr2.4:4945601-4945620 | MS.gene85263:intron | 25.0% |
! | ATTACAGAACTATAGAAGTA+AGG | - | chr2.4:4946503-4946522 | None:intergenic | 25.0% |
! | CAATCAAAAGATAATCAAGT+AGG | - | chr2.4:4946531-4946550 | None:intergenic | 25.0% |
! | GAAAAAAAAAACTGAAGAGA+AGG | - | chr2.4:4945726-4945745 | None:intergenic | 25.0% |
! | TAACATAGAACTCCAATATT+AGG | - | chr2.4:4945639-4945658 | None:intergenic | 25.0% |
! | TAAGACTTAAGTCATGATTT+AGG | + | chr2.4:4943297-4943316 | MS.gene85263:intron | 25.0% |
! | TAGGAAAGTTTACAAAATTC+AGG | + | chr2.4:4948537-4948556 | MS.gene85263:intron | 25.0% |
! | TATAGAGATTAACCTGAATA+AGG | - | chr2.4:4947840-4947859 | None:intergenic | 25.0% |
! | TATGACAAACATCTAGAAAA+AGG | - | chr2.4:4945503-4945522 | None:intergenic | 25.0% |
! | TCAATCAACATAATAACACA+AGG | - | chr2.4:4946571-4946590 | None:intergenic | 25.0% |
! | TCTGCATACACTTATTATAA+TGG | + | chr2.4:4946150-4946169 | MS.gene85263:intron | 25.0% |
! | TTCTATCCATTTATAAGAGT+TGG | - | chr2.4:4945079-4945098 | None:intergenic | 25.0% |
! | TTTGAAAGTGACAGTTAAAT+AGG | + | chr2.4:4947276-4947295 | MS.gene85263:intron | 25.0% |
!! | AAATGAAGATTTTGCGATTT+TGG | + | chr2.4:4944686-4944705 | MS.gene85263:intron | 25.0% |
!! | AATGAAGATTTTGCGATTTT+GGG | + | chr2.4:4944687-4944706 | MS.gene85263:intron | 25.0% |
!! | GTGTTTATTTGAGTACATTT+TGG | - | chr2.4:4945768-4945787 | None:intergenic | 25.0% |
!! | GTTTTCTTCTTGAGAAAAAA+GGG | + | chr2.4:4946002-4946021 | MS.gene85263:intron | 25.0% |
!! | TAAGAAAAAGTAAAGTGTCT+TGG | - | chr2.4:4947131-4947150 | None:intergenic | 25.0% |
!! | TATGTCCCATGATTTTATAA+GGG | + | chr2.4:4945379-4945398 | MS.gene85263:intron | 25.0% |
!! | TGTGTTATTATGTTGATTGA+GGG | + | chr2.4:4946571-4946590 | MS.gene85263:intron | 25.0% |
!! | TGTTTTCTTCTTGAGAAAAA+AGG | + | chr2.4:4946001-4946020 | MS.gene85263:intron | 25.0% |
!! | TTGTGTTATTATGTTGATTG+AGG | + | chr2.4:4946570-4946589 | MS.gene85263:intron | 25.0% |
!! | TTTTAAATTAAGTATGGGGA+TGG | - | chr2.4:4946085-4946104 | None:intergenic | 25.0% |
!!! | AGCTTCAAATGTTTTTATGA+GGG | + | chr2.4:4944350-4944369 | MS.gene85263:intron | 25.0% |
!!! | GTTACTATTACTTTTCCTTT+TGG | + | chr2.4:4947437-4947456 | MS.gene85263:intron | 25.0% |
!!! | TGAATTTTTTCCATACCTTT+GGG | + | chr2.4:4947865-4947884 | MS.gene85263:intron | 25.0% |
!!! | TTACTTTTTAGTTTGTGAGA+TGG | + | chr2.4:4943192-4943211 | MS.gene85263:intron | 25.0% |
!!! | TTGAACTTCGATTGTTTTTT+CGG | + | chr2.4:4944013-4944032 | MS.gene85263:intron | 25.0% |
!!! | TTTTTTTGCTTCTCTTCAAT+GGG | + | chr2.4:4947671-4947690 | MS.gene85263:intron | 25.0% |
!!! | TTTTTTTTGCTTCTCTTCAA+TGG | + | chr2.4:4947670-4947689 | MS.gene85263:intron | 25.0% |
AAGTGACACTTAAAAAGGAA+CGG | - | chr2.4:4947090-4947109 | None:intergenic | 30.0% | |
AAGTTGTAGTAGTTACAAAC+TGG | + | chr2.4:4945027-4945046 | MS.gene85263:intron | 30.0% | |
AATATATGCACTCTGAATGA+GGG | - | chr2.4:4946667-4946686 | None:intergenic | 30.0% | |
AATCAACTATATTACTGCGT+AGG | + | chr2.4:4943556-4943575 | MS.gene85263:intron | 30.0% | |
AGATAACATTCCTAGAGATT+AGG | + | chr2.4:4948518-4948537 | MS.gene85263:intron | 30.0% | |
AGGTATGGAAAAAATTCACA+AGG | - | chr2.4:4947863-4947882 | None:intergenic | 30.0% | |
ATAACACATCTATGGAAGAA+AGG | - | chr2.4:4946610-4946629 | None:intergenic | 30.0% | |
ATAAGTGTACTTCAGAAGTA+AGG | - | chr2.4:4948461-4948480 | None:intergenic | 30.0% | |
ATCCTGTCGAAAAAATAAAG+AGG | - | chr2.4:4949138-4949157 | None:intergenic | 30.0% | |
ATCTTGTATCAACTAGTATC+AGG | + | chr2.4:4945460-4945479 | MS.gene85263:intron | 30.0% | |
ATTACTATGGACAATGATGA+TGG | + | chr2.4:4947810-4947829 | MS.gene85263:CDS | 30.0% | |
CAGTATAGTCAGTACATAAA+AGG | - | chr2.4:4948173-4948192 | None:intergenic | 30.0% | |
CATGAAAGATAATATTCACC+AGG | - | chr2.4:4946427-4946446 | None:intergenic | 30.0% | |
CTCAGAGAATTTCATTATGA+TGG | + | chr2.4:4947415-4947434 | MS.gene85263:intron | 30.0% | |
GAATTAGAGTAAGTAGAGTT+TGG | + | chr2.4:4944850-4944869 | MS.gene85263:intron | 30.0% | |
GCAATAATCATCCAATAACA+CGG | + | chr2.4:4944996-4945015 | MS.gene85263:intron | 30.0% | |
GTTTGCAAGCAAAAGTTAAA+TGG | - | chr2.4:4944450-4944469 | None:intergenic | 30.0% | |
TAACACATCTATGGAAGAAA+GGG | - | chr2.4:4946609-4946628 | None:intergenic | 30.0% | |
TAACTAGGAAGAATCTACTA+TGG | + | chr2.4:4947486-4947505 | MS.gene85263:intron | 30.0% | |
TATATCACAAGTGAATGATG+TGG | - | chr2.4:4944610-4944629 | None:intergenic | 30.0% | |
TATTGTTAATCCTAGTAACG+CGG | + | chr2.4:4943343-4943362 | MS.gene85263:intron | 30.0% | |
TCAATATGATTTCCACTGAT+AGG | + | chr2.4:4948787-4948806 | MS.gene85263:intron | 30.0% | |
TCATTGTCCATAGTAATCAT+TGG | - | chr2.4:4947807-4947826 | None:intergenic | 30.0% | |
TCTTGTATCAACTAGTATCA+GGG | + | chr2.4:4945461-4945480 | MS.gene85263:intron | 30.0% | |
TGTAAACTTTCCTAATCTCT+AGG | - | chr2.4:4948531-4948550 | None:intergenic | 30.0% | |
TGTTGTCTTTCTGTAATGTT+AGG | + | chr2.4:4946360-4946379 | MS.gene85263:intron | 30.0% | |
TTCAGCTATTGAATTGTGTT+TGG | - | chr2.4:4948300-4948319 | None:intergenic | 30.0% | |
TTCTCAAGAAGAAAACAAGA+TGG | - | chr2.4:4945998-4946017 | None:intergenic | 30.0% | |
! | AAATTCATGTGTCTAAAGCA+GGG | - | chr2.4:4946465-4946484 | None:intergenic | 30.0% |
! | AGAGTTTAGTTTACGAACAT+TGG | + | chr2.4:4945421-4945440 | MS.gene85263:intron | 30.0% |
! | ATACAGTCTTGTATCTCTAA+TGG | + | chr2.4:4947911-4947930 | MS.gene85263:intron | 30.0% |
! | CTATGTCCCATGATTTTATA+AGG | + | chr2.4:4945378-4945397 | MS.gene85263:intron | 30.0% |
! | CTCTGAGAAATAATATGTAG+AGG | - | chr2.4:4947402-4947421 | None:intergenic | 30.0% |
! | GTGAATCCTTCTTCTTTTAA+CGG | + | chr2.4:4942979-4942998 | MS.gene85263:CDS | 30.0% |
! | TAAATTCATGTGTCTAAAGC+AGG | - | chr2.4:4946466-4946485 | None:intergenic | 30.0% |
! | TACAGTCTTGTATCTCTAAT+GGG | + | chr2.4:4947912-4947931 | MS.gene85263:intron | 30.0% |
! | TAGTTGATACAAGATCCAAA+CGG | - | chr2.4:4945455-4945474 | None:intergenic | 30.0% |
!! | ATTTATAAGAGTTGGTACAC+GGG | - | chr2.4:4945071-4945090 | None:intergenic | 30.0% |
!! | ATTTTGCGATTTTGGGAAAA+AGG | + | chr2.4:4944694-4944713 | MS.gene85263:intron | 30.0% |
!! | CATTTATAAGAGTTGGTACA+CGG | - | chr2.4:4945072-4945091 | None:intergenic | 30.0% |
!! | GAGAACTTTTCTTGTTTGTT+GGG | + | chr2.4:4945565-4945584 | MS.gene85263:intron | 30.0% |
!! | GAGCTTCAAATGTTTTTATG+AGG | + | chr2.4:4944349-4944368 | MS.gene85263:intron | 30.0% |
!! | GTTCGTTTTTGAAGAAGATA+GGG | + | chr2.4:4944949-4944968 | MS.gene85263:intron | 30.0% |
!! | TCATGTCTTGTTTCCTTATA+TGG | + | chr2.4:4946317-4946336 | MS.gene85263:intron | 30.0% |
!! | TGAGAACTTTTCTTGTTTGT+TGG | + | chr2.4:4945564-4945583 | MS.gene85263:intron | 30.0% |
!!! | CTTTTTAGTTTCCGTGTTAT+TGG | - | chr2.4:4945010-4945029 | None:intergenic | 30.0% |
!!! | GTGAATTTTTTCCATACCTT+TGG | + | chr2.4:4947864-4947883 | MS.gene85263:intron | 30.0% |
!!! | TTCCTCTTTATTTTTTCGAC+AGG | + | chr2.4:4949133-4949152 | MS.gene85263:intron | 30.0% |
AAACCTAGTAAGCTACAACA+CGG | - | chr2.4:4943747-4943766 | None:intergenic | 35.0% | |
AACCTGACATTATGTCTCTT+AGG | + | chr2.4:4948680-4948699 | MS.gene85263:intron | 35.0% | |
AACGCTCAGTTTATTCCAAA+AGG | - | chr2.4:4947455-4947474 | None:intergenic | 35.0% | |
ACAAGGAGGTAATCAACTTT+AGG | + | chr2.4:4944242-4944261 | MS.gene85263:intron | 35.0% | |
ACAGCACCCTTATAAAATCA+TGG | - | chr2.4:4945388-4945407 | None:intergenic | 35.0% | |
ACATATATAATCAGTCGGAC+TGG | - | chr2.4:4948217-4948236 | None:intergenic | 35.0% | |
ACTGAACAACACATACACAA+AGG | - | chr2.4:4948634-4948653 | None:intergenic | 35.0% | |
AGAAAGAAAACAGCAAGAGA+AGG | + | chr2.4:4946199-4946218 | MS.gene85263:CDS | 35.0% | |
AGCTAAATAACAAGACAGTC+CGG | + | chr2.4:4945265-4945284 | MS.gene85263:CDS | 35.0% | |
ATATGACATCTACTTCTGTG+CGG | - | chr2.4:4943789-4943808 | None:intergenic | 35.0% | |
ATATTACTGCGTAGGTCATT+CGG | + | chr2.4:4943564-4943583 | MS.gene85263:intron | 35.0% | |
ATCAACACGGAAACTAAAAG+AGG | + | chr2.4:4944095-4944114 | MS.gene85263:intron | 35.0% | |
ATGAACATGAAGCATAATCC+TGG | + | chr2.4:4943036-4943055 | MS.gene85263:CDS | 35.0% | |
CAACATTCAGCAAAAGAGAT+AGG | - | chr2.4:4946404-4946423 | None:intergenic | 35.0% | |
CACAGGTTTAATGTTTGTCA+AGG | + | chr2.4:4945531-4945550 | MS.gene85263:intron | 35.0% | |
CAGCACCCTTATAAAATCAT+GGG | - | chr2.4:4945387-4945406 | None:intergenic | 35.0% | |
CATAGAACTCCAATATTAGG+TGG | - | chr2.4:4945636-4945655 | None:intergenic | 35.0% | |
CATGTTAAGCAACCCAAAAA+TGG | - | chr2.4:4946889-4946908 | None:intergenic | 35.0% | |
CATTCCAATAAAAGGCGATT+TGG | + | chr2.4:4944134-4944153 | MS.gene85263:intron | 35.0% | |
CCATAGATGTGTTATGACTT+CGG | + | chr2.4:4946615-4946634 | MS.gene85263:intron | 35.0% | |
CCTATAATCATCCATCAACA+CGG | + | chr2.4:4944082-4944101 | MS.gene85263:intron | 35.0% | |
CGTGTACCAACTCTTATAAA+TGG | + | chr2.4:4945070-4945089 | MS.gene85263:intron | 35.0% | |
CGTTGGGAAATTATCTAACT+AGG | + | chr2.4:4947471-4947490 | MS.gene85263:intron | 35.0% | |
CTGAACAACACATACACAAA+GGG | - | chr2.4:4948633-4948652 | None:intergenic | 35.0% | |
CTGTTCGTAATTCTAGATTC+AGG | - | chr2.4:4944923-4944942 | None:intergenic | 35.0% | |
GAAGTCTGCACAAAAATTTC+AGG | - | chr2.4:4947358-4947377 | None:intergenic | 35.0% | |
GAATATATGCACTCTGAATG+AGG | - | chr2.4:4946668-4946687 | None:intergenic | 35.0% | |
GAATTATGGGGCCTAAATTT+AGG | + | chr2.4:4943840-4943859 | MS.gene85263:intron | 35.0% | |
GAATTGCCGTTAAAAGAAGA+AGG | - | chr2.4:4942988-4943007 | None:intergenic | 35.0% | |
GAGTGACACTTAAAAAGGAA+CGG | + | chr2.4:4947317-4947336 | MS.gene85263:intron | 35.0% | |
TACCCTTCCTTATTCACAAA+GGG | - | chr2.4:4944297-4944316 | None:intergenic | 35.0% | |
TCATCAAGAACAACATACTC+AGG | + | chr2.4:4942957-4942976 | MS.gene85263:CDS | 35.0% | |
TCCAAGAGTGACACTTAAAA+AGG | + | chr2.4:4947312-4947331 | MS.gene85263:intron | 35.0% | |
TGACAAATCCACAAAAAGTG+AGG | - | chr2.4:4945694-4945713 | None:intergenic | 35.0% | |
TTGTCCATAGTAATCATTGG+TGG | - | chr2.4:4947804-4947823 | None:intergenic | 35.0% | |
TTTACCTCAGATGTTGGATT+AGG | + | chr2.4:4944873-4944892 | MS.gene85263:intron | 35.0% | |
TTTCCTTATATGGATGGCTT+TGG | + | chr2.4:4946327-4946346 | MS.gene85263:intron | 35.0% | |
TTTGAAAAAACATCACACGC+AGG | + | chr2.4:4943713-4943732 | MS.gene85263:intron | 35.0% | |
TTTGTCGTATATAATCACGG+TGG | + | chr2.4:4943465-4943484 | MS.gene85263:intron | 35.0% | |
! | AAATGAGATGATTTTGCTGC+AGG | - | chr2.4:4947750-4947769 | None:intergenic | 35.0% |
! | AATTCATGTGTCTAAAGCAG+GGG | - | chr2.4:4946464-4946483 | None:intergenic | 35.0% |
! | ACATTGGTTAGTAAACCGTT+TGG | + | chr2.4:4945437-4945456 | MS.gene85263:intron | 35.0% |
! | AGGTGTGTTGACAATATCTT+CGG | + | chr2.4:4948138-4948157 | MS.gene85263:intron | 35.0% |
! | CGTGTTGATGGATGATTATA+GGG | - | chr2.4:4944084-4944103 | None:intergenic | 35.0% |
! | GTGTTGATGGATGATTATAG+GGG | - | chr2.4:4944083-4944102 | None:intergenic | 35.0% |
! | TAACTTTTGCTTGCAAACCA+GGG | + | chr2.4:4944452-4944471 | MS.gene85263:intron | 35.0% |
! | TCTATCTTGTTTCCAGTTAC+AGG | + | chr2.4:4948856-4948875 | MS.gene85263:intron | 35.0% |
! | TCTGCTTGATATTCTGAAAG+TGG | + | chr2.4:4948752-4948771 | MS.gene85263:intron | 35.0% |
! | TGGTTGTGAGGACATTTTAT+GGG | - | chr2.4:4945865-4945884 | None:intergenic | 35.0% |
! | TTAAATGGTGGAAGACACTT+CGG | + | chr2.4:4946047-4946066 | MS.gene85263:intron | 35.0% |
! | TTAACTTTTGCTTGCAAACC+AGG | + | chr2.4:4944451-4944470 | MS.gene85263:intron | 35.0% |
! | TTGACTATCTTTTCTGACAC+TGG | + | chr2.4:4947023-4947042 | MS.gene85263:intron | 35.0% |
! | TTGGTTGTGAGGACATTTTA+TGG | - | chr2.4:4945866-4945885 | None:intergenic | 35.0% |
! | TTTGGAATAAACTGAGCGTT+GGG | + | chr2.4:4947455-4947474 | MS.gene85263:intron | 35.0% |
!! | AATCAACTTTAGGATAGGAC+TGG | + | chr2.4:4944252-4944271 | MS.gene85263:intron | 35.0% |
!! | AATCATTAACTTGTGCCTTG+AGG | - | chr2.4:4946775-4946794 | None:intergenic | 35.0% |
!! | ACATGTTTGTTTCTGCCTTA+TGG | + | chr2.4:4945325-4945344 | MS.gene85263:intron | 35.0% |
!! | ATCAACTTTAGGATAGGACT+GGG | + | chr2.4:4944253-4944272 | MS.gene85263:intron | 35.0% |
!! | ATCATTAACTTGTGCCTTGA+GGG | - | chr2.4:4946774-4946793 | None:intergenic | 35.0% |
!! | ATGTACTGACTATACTGCTT+GGG | + | chr2.4:4948176-4948195 | MS.gene85263:intron | 35.0% |
!! | CGTTCGTTTTTGAAGAAGAT+AGG | + | chr2.4:4944948-4944967 | MS.gene85263:intron | 35.0% |
!! | GAGGTAATCAACTTTAGGAT+AGG | + | chr2.4:4944247-4944266 | MS.gene85263:intron | 35.0% |
!! | GTCTTGTTTCCTTATATGGA+TGG | + | chr2.4:4946321-4946340 | MS.gene85263:intron | 35.0% |
!! | TATGTACTGACTATACTGCT+TGG | + | chr2.4:4948175-4948194 | MS.gene85263:intron | 35.0% |
!! | TGCTACTTCACTTTTGTTTC+CGG | - | chr2.4:4947575-4947594 | None:intergenic | 35.0% |
!!! | ACCAAGAGCGAACTTTTTTA+GGG | + | chr2.4:4943385-4943404 | MS.gene85263:intron | 35.0% |
!!! | TCCTTTTTAAGTGTCACTCT+TGG | - | chr2.4:4947316-4947335 | None:intergenic | 35.0% |
!!! | TCTTTTAGTTTCCGTGTTGA+TGG | - | chr2.4:4944096-4944115 | None:intergenic | 35.0% |
!!! | TTTTGGAATAAACTGAGCGT+TGG | + | chr2.4:4947454-4947473 | MS.gene85263:intron | 35.0% |
AACCTAGTAAGCTACAACAC+GGG | - | chr2.4:4943746-4943765 | None:intergenic | 40.0% | |
AAGATAGGGCAATAACTGTC+AGG | + | chr2.4:4944963-4944982 | MS.gene85263:intron | 40.0% | |
AAGTGAATGATGTGGTCTAG+GGG | - | chr2.4:4944602-4944621 | None:intergenic | 40.0% | |
AAGTGATTTCCCAAAGACAG+TGG | - | chr2.4:4944752-4944771 | None:intergenic | 40.0% | |
ACAAGTGAATGATGTGGTCT+AGG | - | chr2.4:4944604-4944623 | None:intergenic | 40.0% | |
ACCTAAGGCTACTAAAGCTA+TGG | - | chr2.4:4943897-4943916 | None:intergenic | 40.0% | |
AGAAAACAGCAAGAGAAGGA+AGG | + | chr2.4:4946203-4946222 | MS.gene85263:CDS | 40.0% | |
AGAAAGGGTTCATGGCATTT+GGG | + | chr2.4:4944828-4944847 | MS.gene85263:intron | 40.0% | |
AGCTCTTCATTCATCTTCAC+TGG | - | chr2.4:4949201-4949220 | None:intergenic | 40.0% | |
AGGAAAGGTTTGCAGAGATT+TGG | - | chr2.4:4948112-4948131 | None:intergenic | 40.0% | |
ATACAGCAAATGCAACAAGG+AGG | + | chr2.4:4944228-4944247 | MS.gene85263:intron | 40.0% | |
ATAGCTAAAACACGCAGTGA+GGG | + | chr2.4:4944535-4944554 | MS.gene85263:intron | 40.0% | |
ATCCTGGCATATCTCTTGAT+TGG | + | chr2.4:4943052-4943071 | MS.gene85263:CDS | 40.0% | |
ATCTCTATAGGGACATAGGA+AGG | - | chr2.4:4944726-4944745 | None:intergenic | 40.0% | |
ATGTACGCCCTTTGTGAATA+AGG | + | chr2.4:4944287-4944306 | MS.gene85263:intron | 40.0% | |
CAAGTGAATGATGTGGTCTA+GGG | - | chr2.4:4944603-4944622 | None:intergenic | 40.0% | |
CAGCGTACATACAAACATAC+AGG | - | chr2.4:4948602-4948621 | None:intergenic | 40.0% | |
CCAATACAGCAAATGCAACA+AGG | + | chr2.4:4944225-4944244 | MS.gene85263:intron | 40.0% | |
CCGAAGTCATAACACATCTA+TGG | - | chr2.4:4946618-4946637 | None:intergenic | 40.0% | |
CGCAGTTGACTAATCAGAAA+GGG | + | chr2.4:4944813-4944832 | MS.gene85263:intron | 40.0% | |
CTCCTAAGAGACATAATGTC+AGG | - | chr2.4:4948685-4948704 | None:intergenic | 40.0% | |
CTGACATTATGTCTCTTAGG+AGG | + | chr2.4:4948683-4948702 | MS.gene85263:intron | 40.0% | |
CTGATATGTTATCCCCTTAG+GGG | - | chr2.4:4944162-4944181 | None:intergenic | 40.0% | |
CTTACTTTACATAGAGCCAC+GGG | + | chr2.4:4944789-4944808 | MS.gene85263:intron | 40.0% | |
CTTTCCTAATCCAACATCTG+AGG | - | chr2.4:4944880-4944899 | None:intergenic | 40.0% | |
GAACAATCCATTCTCGAAGA+TGG | + | chr2.4:4943084-4943103 | MS.gene85263:CDS | 40.0% | |
GAAGATATTGTCAACACACC+TGG | - | chr2.4:4948139-4948158 | None:intergenic | 40.0% | |
GACACTTAAAAAGGAACGGA+GGG | + | chr2.4:4947321-4947340 | MS.gene85263:intron | 40.0% | |
GACTAATCAGAAAGGGTTCA+TGG | + | chr2.4:4944820-4944839 | MS.gene85263:intron | 40.0% | |
GCTAAATAACAAGACAGTCC+GGG | + | chr2.4:4945266-4945285 | MS.gene85263:CDS | 40.0% | |
GCTGATATGTTATCCCCTTA+GGG | - | chr2.4:4944163-4944182 | None:intergenic | 40.0% | |
GCTTACTTTACATAGAGCCA+CGG | + | chr2.4:4944788-4944807 | MS.gene85263:intron | 40.0% | |
GGAAAGGTTTGCAGAGATTT+GGG | - | chr2.4:4948111-4948130 | None:intergenic | 40.0% | |
GTACCCTTCCTTATTCACAA+AGG | - | chr2.4:4944298-4944317 | None:intergenic | 40.0% | |
GTTAGGCTATTGTTTGTCTC+TGG | + | chr2.4:4946377-4946396 | MS.gene85263:intron | 40.0% | |
GTTGTTACATCCTAGTGGTT+TGG | - | chr2.4:4945885-4945904 | None:intergenic | 40.0% | |
TATAGCTAAAACACGCAGTG+AGG | + | chr2.4:4944534-4944553 | MS.gene85263:intron | 40.0% | |
TCATTCATCTTCACTGGAAG+AGG | - | chr2.4:4949195-4949214 | None:intergenic | 40.0% | |
TCCCTAAAAAAGTTCGCTCT+TGG | - | chr2.4:4943389-4943408 | None:intergenic | 40.0% | |
TCTCCAAAGCCATCCATATA+AGG | - | chr2.4:4946333-4946352 | None:intergenic | 40.0% | |
TGACACTTAAAAAGGAACGG+AGG | + | chr2.4:4947320-4947339 | MS.gene85263:intron | 40.0% | |
TGACACTTAAAAAGGAACGG+AGG | - | chr2.4:4947339-4947320 | None:intergenic | 40.0% | |
TGCTGATATGTTATCCCCTT+AGG | - | chr2.4:4944164-4944183 | None:intergenic | 40.0% | |
TGGTCTCAAAGTATGTTGAC+TGG | - | chr2.4:4943369-4943388 | None:intergenic | 40.0% | |
TGTGTTATGACTTCGGAGTT+TGG | + | chr2.4:4946622-4946641 | MS.gene85263:intron | 40.0% | |
TTACTTTACATAGAGCCACG+GGG | + | chr2.4:4944790-4944809 | MS.gene85263:intron | 40.0% | |
TTGCTTAACATGTGCCCTAA+GGG | + | chr2.4:4946897-4946916 | MS.gene85263:intron | 40.0% | |
TTTCTCATTCTGCTCTGCAT+TGG | - | chr2.4:4948497-4948516 | None:intergenic | 40.0% | |
TTTGTCATAACAGTGCTCAC+AGG | + | chr2.4:4945514-4945533 | MS.gene85263:intron | 40.0% | |
TTTGTGCATGTGTGAAATGC+TGG | + | chr2.4:4947619-4947638 | MS.gene85263:intron | 40.0% | |
! | AGCTTTAGTAGCCTTAGGTT+AGG | + | chr2.4:4943898-4943917 | MS.gene85263:intron | 40.0% |
! | AGTTTAGTACAGAGGGCTTT+TGG | + | chr2.4:4943590-4943609 | MS.gene85263:intron | 40.0% |
! | AGTTTTACAGCCACAGAGAA+TGG | - | chr2.4:4948813-4948832 | None:intergenic | 40.0% |
! | CAACCTTTTGTGCCAAACTA+GGG | + | chr2.4:4948886-4948905 | MS.gene85263:CDS | 40.0% |
! | CATCATCGTTTTGCAGCAAT+TGG | + | chr2.4:4948041-4948060 | MS.gene85263:intron | 40.0% |
! | CCGTGTTGATGGATGATTAT+AGG | - | chr2.4:4944085-4944104 | None:intergenic | 40.0% |
! | GACATTTTATGGGGAATCTC+AGG | - | chr2.4:4945855-4945874 | None:intergenic | 40.0% |
! | GGTTGTGAGGACATTTTATG+GGG | - | chr2.4:4945864-4945883 | None:intergenic | 40.0% |
! | GTTTAGTACAGAGGGCTTTT+GGG | + | chr2.4:4943591-4943610 | MS.gene85263:intron | 40.0% |
! | GTTTGGTTTACCTCAGATGT+TGG | + | chr2.4:4944867-4944886 | MS.gene85263:intron | 40.0% |
! | TCAACCTTTTGTGCCAAACT+AGG | + | chr2.4:4948885-4948904 | MS.gene85263:CDS | 40.0% |
! | TGATGATGTTGTCCCTAGTT+TGG | - | chr2.4:4948901-4948920 | None:intergenic | 40.0% |
! | TTTCTTTCTTTCTGGCCTAG+TGG | + | chr2.4:4945742-4945761 | MS.gene85263:intron | 40.0% |
!! | AATGTTAACTTGTGCCCTCA+AGG | + | chr2.4:4946757-4946776 | MS.gene85263:intron | 40.0% |
!! | AGGAGGTATTGAAACTGCAT+AGG | + | chr2.4:4948700-4948719 | MS.gene85263:intron | 40.0% |
!! | CATGTTAACTTGTGCCCTTA+GGG | - | chr2.4:4946914-4946933 | None:intergenic | 40.0% |
!! | CCTTGTTGCATTTGCTGTAT+TGG | - | chr2.4:4944228-4944247 | None:intergenic | 40.0% |
!! | CGAGAATGGATTGTTCTTCA+GGG | - | chr2.4:4943080-4943099 | None:intergenic | 40.0% |
!! | CGATTTTGGGAAAAAGGACA+TGG | + | chr2.4:4944700-4944719 | MS.gene85263:intron | 40.0% |
!! | GAGAATGGATTGTTCTTCAG+GGG | - | chr2.4:4943079-4943098 | None:intergenic | 40.0% |
!! | GCTACTTCACTTTTGTTTCC+GGG | - | chr2.4:4947574-4947593 | None:intergenic | 40.0% |
!! | GGTTGATGTTTTCCTGTAAC+TGG | - | chr2.4:4948871-4948890 | None:intergenic | 40.0% |
!! | TATAAGGGTGCTGTTGCATT+AGG | + | chr2.4:4945394-4945413 | MS.gene85263:intron | 40.0% |
!! | TCAACTTTAGGATAGGACTG+GGG | + | chr2.4:4944254-4944273 | MS.gene85263:intron | 40.0% |
!! | TCATGTTAACTTGTGCCCTT+AGG | - | chr2.4:4946915-4946934 | None:intergenic | 40.0% |
!! | TCGAGAATGGATTGTTCTTC+AGG | - | chr2.4:4943081-4943100 | None:intergenic | 40.0% |
!! | TTGAGTACATTTTGGCCACT+AGG | - | chr2.4:4945760-4945779 | None:intergenic | 40.0% |
!!! | GACCAAGAGCGAACTTTTTT+AGG | + | chr2.4:4943384-4943403 | MS.gene85263:intron | 40.0% |
AAGATGAAAAGATGGCCGTC+TGG | - | chr2.4:4945908-4945927 | None:intergenic | 45.0% | |
ACAAGACCTGAAGAGGTTTC+AGG | - | chr2.4:4943015-4943034 | None:intergenic | 45.0% | |
ACACACAGTGAGAGAGAAAG+TGG | + | chr2.4:4945814-4945833 | MS.gene85263:intron | 45.0% | |
ACCTGAAGAGGTTTCAGGAA+CGG | - | chr2.4:4943010-4943029 | None:intergenic | 45.0% | |
ACGCCCTTTGTGAATAAGGA+AGG | + | chr2.4:4944291-4944310 | MS.gene85263:intron | 45.0% | |
AGAGATCCACCACTGTCTTT+GGG | + | chr2.4:4944740-4944759 | MS.gene85263:intron | 45.0% | |
AGATGAAAAGATGGCCGTCT+GGG | - | chr2.4:4945907-4945926 | None:intergenic | 45.0% | |
ATCCCGTGTTGTAGCTTACT+AGG | + | chr2.4:4943741-4943760 | MS.gene85263:intron | 45.0% | |
CAGAAAGGGTTCATGGCATT+TGG | + | chr2.4:4944827-4944846 | MS.gene85263:intron | 45.0% | |
CAGGATGAATGATTCACCAG+CGG | + | chr2.4:4949152-4949171 | MS.gene85263:intron | 45.0% | |
CGCCCTTTGTGAATAAGGAA+GGG | + | chr2.4:4944292-4944311 | MS.gene85263:intron | 45.0% | |
CTAGGATGTAACAACCCAGA+CGG | + | chr2.4:4945890-4945909 | MS.gene85263:intron | 45.0% | |
GACCAATCAAGAGATATGCC+AGG | - | chr2.4:4943057-4943076 | None:intergenic | 45.0% | |
GATTACCACCAGTACCAGAA+GGG | - | chr2.4:4942939-4942958 | None:intergenic | 45.0% | |
GCCACTACGTCTAAGTTCTT+GGG | + | chr2.4:4944318-4944337 | MS.gene85263:intron | 45.0% | |
GCGCAGTTGACTAATCAGAA+AGG | + | chr2.4:4944812-4944831 | MS.gene85263:intron | 45.0% | |
GGAATCTCAGGTTCAAACCA+TGG | - | chr2.4:4945843-4945862 | None:intergenic | 45.0% | |
GTGGATCTCTATAGGGACAT+AGG | - | chr2.4:4944730-4944749 | None:intergenic | 45.0% | |
GTTCATGACAAGACCTGAAG+AGG | - | chr2.4:4943022-4943041 | None:intergenic | 45.0% | |
GTTGCTTAACATGTGCCCTA+AGG | + | chr2.4:4946896-4946915 | MS.gene85263:intron | 45.0% | |
GTTTAGATAACCCAACCGCT+CGG | + | chr2.4:4943763-4943782 | MS.gene85263:intron | 45.0% | |
GTTTGCAGAGATTTGGGTCA+TGG | - | chr2.4:4948105-4948124 | None:intergenic | 45.0% | |
TAGAGATCCACCACTGTCTT+TGG | + | chr2.4:4944739-4944758 | MS.gene85263:intron | 45.0% | |
TCGGTCGAGTTTAGTACAGA+GGG | + | chr2.4:4943583-4943602 | MS.gene85263:intron | 45.0% | |
TCTGGGTTGTTACATCCTAG+TGG | - | chr2.4:4945890-4945909 | None:intergenic | 45.0% | |
TGACTTCGGAGTTTGGACTT+TGG | + | chr2.4:4946629-4946648 | MS.gene85263:intron | 45.0% | |
TGATTACCACCAGTACCAGA+AGG | - | chr2.4:4942940-4942959 | None:intergenic | 45.0% | |
TGATTTCCCAAAGACAGTGG+TGG | - | chr2.4:4944749-4944768 | None:intergenic | 45.0% | |
TGCGCCACCAATGATTACTA+TGG | + | chr2.4:4947797-4947816 | MS.gene85263:CDS | 45.0% | |
TGCTCTAATAGCTCAGCAGT+GGG | - | chr2.4:4948071-4948090 | None:intergenic | 45.0% | |
TGGATGATTATTGCCTCTCC+TGG | - | chr2.4:4944990-4945009 | None:intergenic | 45.0% | |
TGTCCCTAGTTTGGCACAAA+AGG | - | chr2.4:4948892-4948911 | None:intergenic | 45.0% | |
TTCATCTTCACTGGAAGAGG+CGG | - | chr2.4:4949192-4949211 | None:intergenic | 45.0% | |
TTCGGTCGAGTTTAGTACAG+AGG | + | chr2.4:4943582-4943601 | MS.gene85263:intron | 45.0% | |
! | CATCGTTTTGCAGCAATTGG+AGG | + | chr2.4:4948044-4948063 | MS.gene85263:intron | 45.0% |
! | CTCTTTTGCTGAATGTTGCC+TGG | + | chr2.4:4946406-4946425 | MS.gene85263:intron | 45.0% |
! | GATGATGGCATCCCTTATTC+AGG | + | chr2.4:4947825-4947844 | MS.gene85263:CDS | 45.0% |
! | GGCACCAAATCGCCTTTTAT+TGG | - | chr2.4:4944141-4944160 | None:intergenic | 45.0% |
! | TAGTAGCCTTAGGTTAGGAC+CGG | + | chr2.4:4943903-4943922 | MS.gene85263:intron | 45.0% |
! | TATTGACTACTACGCAAGGC+CGG | - | chr2.4:4943925-4943944 | None:intergenic | 45.0% |
! | TTCCATACCTTTGGGTGTTG+TGG | + | chr2.4:4947873-4947892 | MS.gene85263:intron | 45.0% |
!! | AACTTTAGGATAGGACTGGG+GGG | + | chr2.4:4944256-4944275 | MS.gene85263:intron | 45.0% |
!! | AGACAGTGGTGGATCTCTAT+AGG | - | chr2.4:4944738-4944757 | None:intergenic | 45.0% |
!! | ATCCTAGTGGTTTGGTTGTG+AGG | - | chr2.4:4945877-4945896 | None:intergenic | 45.0% |
!! | CAACTTTAGGATAGGACTGG+GGG | + | chr2.4:4944255-4944274 | MS.gene85263:intron | 45.0% |
!! | GACAGTGGTGGATCTCTATA+GGG | - | chr2.4:4944737-4944756 | None:intergenic | 45.0% |
!! | GCCATAGCTTTAGTAGCCTT+AGG | + | chr2.4:4943893-4943912 | MS.gene85263:intron | 45.0% |
!! | GGAGTTTGGACTTTGGAGTT+TGG | + | chr2.4:4946636-4946655 | MS.gene85263:intron | 45.0% |
!! | GTAATCATTGGTGGCGCATA+TGG | - | chr2.4:4947795-4947814 | None:intergenic | 45.0% |
!! | TATGGGCTAAAAGAAGTGCC+CGG | + | chr2.4:4947553-4947572 | MS.gene85263:intron | 45.0% |
!!! | AGGGCTTTTGGGTTGGATAT+GGG | + | chr2.4:4943602-4943621 | MS.gene85263:intron | 45.0% |
!!! | CTCTTGCACCTCACTTTTTG+TGG | + | chr2.4:4945683-4945702 | MS.gene85263:intron | 45.0% |
!! | ATATACAAATTTAAAAAAAT+GGG | - | chr2.4:4944377-4944396 | None:intergenic | 5.0% |
!! | TATATACAAATTTAAAAAAA+TGG | - | chr2.4:4944378-4944397 | None:intergenic | 5.0% |
AACACACCTGGAGAGAGGAA+AGG | - | chr2.4:4948127-4948146 | None:intergenic | 50.0% | |
ACGGGCTCTTTCAACAAGTC+AGG | - | chr2.4:4945053-4945072 | None:intergenic | 50.0% | |
ACGTCTAAGTTCTTGGGCAG+TGG | + | chr2.4:4944324-4944343 | MS.gene85263:intron | 50.0% | |
AGCCACAACACCCAAAGGTA+TGG | - | chr2.4:4947878-4947897 | None:intergenic | 50.0% | |
ATAACTGTCAGGTCCAGGAG+AGG | + | chr2.4:4944974-4944993 | MS.gene85263:intron | 50.0% | |
CACAGAGAATGGCCTATCAG+TGG | - | chr2.4:4948802-4948821 | None:intergenic | 50.0% | |
CACTGATAGGCCATTCTCTG+TGG | + | chr2.4:4948800-4948819 | MS.gene85263:intron | 50.0% | |
CGCCACTACGTCTAAGTTCT+TGG | + | chr2.4:4944317-4944336 | MS.gene85263:intron | 50.0% | |
CTATGGAAGAAAGGGTCCAG+AGG | - | chr2.4:4946601-4946620 | None:intergenic | 50.0% | |
CTGCTCTAATAGCTCAGCAG+TGG | - | chr2.4:4948072-4948091 | None:intergenic | 50.0% | |
GACTGCTATGCTATGCAACG+CGG | - | chr2.4:4943955-4943974 | None:intergenic | 50.0% | |
GAGAGAGAAAGTGGTGACCA+TGG | + | chr2.4:4945823-4945842 | MS.gene85263:intron | 50.0% | |
GCCCAAGAACTTAGACGTAG+TGG | - | chr2.4:4944322-4944341 | None:intergenic | 50.0% | |
GCGCACGATGTTAGATTCTG+AGG | - | chr2.4:4945226-4945245 | None:intergenic | 50.0% | |
GTCCTCACAACCAAACCACT+AGG | + | chr2.4:4945872-4945891 | MS.gene85263:intron | 50.0% | |
TAACAAGACAGTCCGGGATG+TGG | + | chr2.4:4945272-4945291 | MS.gene85263:CDS | 50.0% | |
TATAGGGGTTCTTCTTCCCC+TGG | - | chr2.4:4944068-4944087 | None:intergenic | 50.0% | |
TCCGTTCCTGAAACCTCTTC+AGG | + | chr2.4:4943006-4943025 | MS.gene85263:CDS | 50.0% | |
TGCAAACCTTTCCTCTCTCC+AGG | + | chr2.4:4948118-4948137 | MS.gene85263:CDS | 50.0% | |
TGTCAAGCCACAACACCCAA+AGG | - | chr2.4:4947883-4947902 | None:intergenic | 50.0% | |
TTGTCAACACACCTGGAGAG+AGG | - | chr2.4:4948132-4948151 | None:intergenic | 50.0% | |
! | CGGCTATTGACTACTACGCA+AGG | - | chr2.4:4943929-4943948 | None:intergenic | 50.0% |
! | GTGTTCCTGGGAGTATGGAA+CGG | - | chr2.4:4949227-4949246 | None:intergenic | 50.0% |
! | TGTTCCTGGGAGTATGGAAC+GGG | - | chr2.4:4949226-4949245 | None:intergenic | 50.0% |
!! | AGTACAGAGGGCTTTTGGGT+TGG | + | chr2.4:4943595-4943614 | MS.gene85263:intron | 50.0% |
!! | ATCATTGGTGGCGCATATGG+AGG | - | chr2.4:4947792-4947811 | None:intergenic | 50.0% |
!! | TCATTGGTGGCGCATATGGA+GGG | - | chr2.4:4947791-4947810 | None:intergenic | 50.0% |
!!! | GAGGGCTTTTGGGTTGGATA+TGG | + | chr2.4:4943601-4943620 | MS.gene85263:intron | 50.0% |
!!! | GGGCTTTTGGGTTGGATATG+GGG | + | chr2.4:4943603-4943622 | MS.gene85263:intron | 50.0% |
AAAGAGCCAGATTCGAGCCC+TGG | - | chr2.4:4944472-4944491 | None:intergenic | 55.0% | |
ATGGCGAACCCTTCTGGTAC+TGG | + | chr2.4:4942928-4942947 | MS.gene85263:CDS | 55.0% | |
ATGTGGCACTACGTGTCAGG+TGG | + | chr2.4:4945289-4945308 | MS.gene85263:CDS | 55.0% | |
GCAGTGAGGGACTTGAACTC+AGG | + | chr2.4:4944548-4944567 | MS.gene85263:intron | 55.0% | |
GGCATTTGCTTCATCACCGC+TGG | - | chr2.4:4949171-4949190 | None:intergenic | 55.0% | |
GGCGAGTCCATCTTCGAGAA+TGG | - | chr2.4:4943094-4943113 | None:intergenic | 55.0% | |
GGGCAATAACTGTCAGGTCC+AGG | + | chr2.4:4944969-4944988 | MS.gene85263:intron | 55.0% | |
GTTGATTGAGGGCTGACCTC+TGG | + | chr2.4:4946582-4946601 | MS.gene85263:intron | 55.0% | |
TGACACGTAGTGCCACATCC+CGG | - | chr2.4:4945287-4945306 | None:intergenic | 55.0% | |
TGCAAACCAGGGCTCGAATC+TGG | + | chr2.4:4944463-4944482 | MS.gene85263:intron | 55.0% | |
TGCTATGCTATGCAACGCGG+CGG | - | chr2.4:4943952-4943971 | None:intergenic | 55.0% | |
! | TGTTGACTGGCCGCGTTACT+AGG | - | chr2.4:4943356-4943375 | None:intergenic | 55.0% |
!! | AAGGCGATTTGGTGCCCCTA+AGG | + | chr2.4:4944145-4944164 | MS.gene85263:intron | 55.0% |
!! | AGGCGATTTGGTGCCCCTAA+GGG | + | chr2.4:4944146-4944165 | MS.gene85263:intron | 55.0% |
!! | GAGAGGTGTTCCTGGGAGTA+TGG | - | chr2.4:4949232-4949251 | None:intergenic | 55.0% |
!! | GAGGATGGAGAGGTGTTCCT+GGG | - | chr2.4:4949239-4949258 | None:intergenic | 55.0% |
!! | TGAGGATGGAGAGGTGTTCC+TGG | - | chr2.4:4949240-4949259 | None:intergenic | 55.0% |
CTGTCCCGTTCCATACTCCC+AGG | + | chr2.4:4949219-4949238 | MS.gene85263:CDS | 60.0% | |
GCAAGGCCGGTCCTAACCTA+AGG | - | chr2.4:4943912-4943931 | None:intergenic | 60.0% | |
GGCGCATATGGAGGGACACT+GGG | - | chr2.4:4947783-4947802 | None:intergenic | 60.0% | |
GGGATGTGGCACTACGTGTC+AGG | + | chr2.4:4945286-4945305 | MS.gene85263:CDS | 60.0% | |
TAGGATAGGACTGGGGGGTG+TGG | + | chr2.4:4944261-4944280 | MS.gene85263:intron | 60.0% | |
TATGCTATGCAACGCGGCGG+CGG | - | chr2.4:4943949-4943968 | None:intergenic | 60.0% | |
TCTACTTCTGTGCGGCCGAG+CGG | - | chr2.4:4943781-4943800 | None:intergenic | 60.0% | |
TGGCGCATATGGAGGGACAC+TGG | - | chr2.4:4947784-4947803 | None:intergenic | 60.0% | |
! | GATTAGTCAACTGCGCCCCG+TGG | - | chr2.4:4944808-4944827 | None:intergenic | 60.0% |
! | GCGAACCCTTCTGGTACTGG+TGG | + | chr2.4:4942931-4942950 | MS.gene85263:CDS | 60.0% |
!! | GGCGATTTGGTGCCCCTAAG+GGG | + | chr2.4:4944147-4944166 | MS.gene85263:intron | 60.0% |
TTCTGTGCGGCCGAGCGGTT+GGG | - | chr2.4:4943776-4943795 | None:intergenic | 65.0% | |
CTTCTGTGCGGCCGAGCGGT+TGG | - | chr2.4:4943777-4943796 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 4942928 | 4949266 | 4942928 | ID=MS.gene85263 |
chr2.4 | mRNA | 4942928 | 4949266 | 4942928 | ID=MS.gene85263.t1;Parent=MS.gene85263 |
chr2.4 | exon | 4942928 | 4943115 | 4942928 | ID=MS.gene85263.t1.exon1;Parent=MS.gene85263.t1 |
chr2.4 | CDS | 4942928 | 4943115 | 4942928 | ID=cds.MS.gene85263.t1;Parent=MS.gene85263.t1 |
chr2.4 | exon | 4945218 | 4945317 | 4945218 | ID=MS.gene85263.t1.exon2;Parent=MS.gene85263.t1 |
chr2.4 | CDS | 4945218 | 4945317 | 4945218 | ID=cds.MS.gene85263.t1;Parent=MS.gene85263.t1 |
chr2.4 | exon | 4946198 | 4946263 | 4946198 | ID=MS.gene85263.t1.exon3;Parent=MS.gene85263.t1 |
chr2.4 | CDS | 4946198 | 4946263 | 4946198 | ID=cds.MS.gene85263.t1;Parent=MS.gene85263.t1 |
chr2.4 | exon | 4947732 | 4947846 | 4947732 | ID=MS.gene85263.t1.exon4;Parent=MS.gene85263.t1 |
chr2.4 | CDS | 4947732 | 4947846 | 4947732 | ID=cds.MS.gene85263.t1;Parent=MS.gene85263.t1 |
chr2.4 | exon | 4948057 | 4948139 | 4948057 | ID=MS.gene85263.t1.exon5;Parent=MS.gene85263.t1 |
chr2.4 | CDS | 4948057 | 4948139 | 4948057 | ID=cds.MS.gene85263.t1;Parent=MS.gene85263.t1 |
chr2.4 | exon | 4948872 | 4948933 | 4948872 | ID=MS.gene85263.t1.exon6;Parent=MS.gene85263.t1 |
chr2.4 | CDS | 4948872 | 4948933 | 4948872 | ID=cds.MS.gene85263.t1;Parent=MS.gene85263.t1 |
chr2.4 | exon | 4949155 | 4949266 | 4949155 | ID=MS.gene85263.t1.exon7;Parent=MS.gene85263.t1 |
chr2.4 | CDS | 4949155 | 4949266 | 4949155 | ID=cds.MS.gene85263.t1;Parent=MS.gene85263.t1 |
Gene Sequence |
Protein sequence |