Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026651.t1 | RHN77912.1 | 98.5 | 330 | 5 | 0 | 1 | 330 | 1 | 330 | 6.90E-188 | 666.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026651.t1 | Q9XHZ8 | 71.5 | 330 | 88 | 2 | 1 | 330 | 1 | 324 | 2.3e-139 | 496.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026651.t1 | A0A396JKN5 | 98.5 | 330 | 5 | 0 | 1 | 330 | 1 | 330 | 5.0e-188 | 666.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene026651.t1 | TR | TRAF |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene53169 | MS.gene026651 | PPI |
| MS.gene99693 | MS.gene026651 | PPI |
| MS.gene62620 | MS.gene026651 | PPI |
| MS.gene95889 | MS.gene026651 | PPI |
| MS.gene93783 | MS.gene026651 | PPI |
| MS.gene55382 | MS.gene026651 | PPI |
| MS.gene040151 | MS.gene026651 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026651.t1 | MTR_1g029850 | 97.879 | 330 | 5 | 1 | 1 | 330 | 1 | 328 | 0.0 | 667 |
| MS.gene026651.t1 | MTR_3g088560 | 72.727 | 330 | 81 | 5 | 1 | 328 | 1 | 323 | 2.04e-175 | 489 |
| MS.gene026651.t1 | MTR_3g088560 | 72.727 | 242 | 62 | 3 | 89 | 328 | 14 | 253 | 1.13e-123 | 355 |
| MS.gene026651.t1 | MTR_3g088560 | 68.284 | 268 | 77 | 5 | 63 | 328 | 7 | 268 | 6.76e-123 | 354 |
| MS.gene026651.t1 | MTR_3g061090 | 51.051 | 333 | 155 | 4 | 1 | 330 | 1 | 328 | 1.21e-119 | 348 |
| MS.gene026651.t1 | MTR_3g088560 | 73.000 | 200 | 52 | 2 | 131 | 328 | 2 | 201 | 9.16e-102 | 298 |
| MS.gene026651.t1 | MTR_5g096700 | 44.648 | 327 | 174 | 4 | 5 | 330 | 9 | 329 | 1.76e-98 | 294 |
| MS.gene026651.t1 | MTR_3g061090 | 48.828 | 256 | 128 | 2 | 76 | 330 | 3 | 256 | 1.50e-82 | 251 |
| MS.gene026651.t1 | MTR_5g096700 | 42.182 | 275 | 152 | 4 | 57 | 330 | 2 | 270 | 1.62e-72 | 226 |
| MS.gene026651.t1 | MTR_5g096790 | 34.328 | 335 | 188 | 10 | 5 | 326 | 7 | 322 | 8.44e-57 | 187 |
| MS.gene026651.t1 | MTR_7g094490 | 24.051 | 316 | 192 | 9 | 14 | 293 | 41 | 344 | 1.73e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026651.t1 | AT1G21780 | 71.515 | 330 | 88 | 2 | 1 | 330 | 1 | 324 | 0.0 | 508 |
| MS.gene026651.t1 | AT1G21780 | 71.515 | 330 | 88 | 2 | 1 | 330 | 1 | 324 | 0.0 | 508 |
| MS.gene026651.t1 | AT1G55760 | 48.204 | 334 | 162 | 6 | 1 | 330 | 1 | 327 | 6.15e-110 | 323 |
| MS.gene026651.t1 | AT2G39760 | 30.719 | 153 | 95 | 1 | 152 | 293 | 179 | 331 | 3.85e-13 | 69.7 |
| MS.gene026651.t1 | AT2G39760 | 30.719 | 153 | 95 | 1 | 152 | 293 | 179 | 331 | 4.58e-13 | 69.7 |
| MS.gene026651.t1 | AT2G39760 | 30.719 | 153 | 95 | 1 | 152 | 293 | 179 | 331 | 4.58e-13 | 69.7 |
| MS.gene026651.t1 | AT2G39760 | 30.719 | 153 | 95 | 1 | 152 | 293 | 179 | 331 | 1.10e-12 | 68.9 |
Find 69 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCCTTTCAAACTTGGTATT+TGG | 0.128764 | 1.4:+15031074 | MS.gene026651:CDS |
| CGCAACCTCTCCTGTGTTTC+AGG | 0.153472 | 1.4:+15034212 | MS.gene026651:CDS |
| CAATAAAACCCGAAGATTTC+TGG | 0.200729 | 1.4:+15034337 | MS.gene026651:CDS |
| TTCAAGAAGTGCTTACAATT+TGG | 0.244125 | 1.4:+15034619 | MS.gene026651:CDS |
| ATCACTGATGTCGTATTTAT+TGG | 0.253571 | 1.4:-15034388 | None:intergenic |
| TGAACCTTCGCGTGTTTCTA+AGG | 0.294946 | 1.4:+15031232 | MS.gene026651:CDS |
| CTGTGCTTCCAGAAATCTTC+GGG | 0.311859 | 1.4:-15034345 | None:intergenic |
| TTCGCATTCTTGTTTGATTT+CGG | 0.315974 | 1.4:+15034522 | MS.gene026651:CDS |
| TTAGAAACACGCGAAGGTTC+AGG | 0.373550 | 1.4:-15031230 | None:intergenic |
| AGAAGAAGAAGAAGCAGTAT+TGG | 0.384918 | 1.4:-15031291 | None:intergenic |
| TGTACCATCTGCAGTTATAA+TGG | 0.388784 | 1.4:-15034163 | None:intergenic |
| TCAAACTTGGTATTTGGAAC+TGG | 0.400132 | 1.4:+15031080 | MS.gene026651:CDS |
| CAATTTCCCGATTAGCTCAA+TGG | 0.401221 | 1.4:+15031011 | MS.gene026651:CDS |
| AAATCAGACCCTTTCAAACT+TGG | 0.408826 | 1.4:+15031067 | MS.gene026651:CDS |
| CGAAGAATGAAACGAGCAAT+AGG | 0.409761 | 1.4:-15031263 | None:intergenic |
| CCTGTGCTTCCAGAAATCTT+CGG | 0.410951 | 1.4:-15034346 | None:intergenic |
| CTTTCTTCAACTTGTGCAGC+TGG | 0.413291 | 1.4:-15034494 | None:intergenic |
| ATTTGTCGATAGAGAGAAAC+AGG | 0.424241 | 1.4:+15031186 | MS.gene026651:CDS |
| AAGCACAGGCTGGCATTGCT+TGG | 0.427569 | 1.4:+15034360 | MS.gene026651:CDS |
| GAACCTGTGATGACTTTGTC+TGG | 0.430022 | 1.4:+15033687 | MS.gene026651:CDS |
| AGGGGAAATGTAAAATTTGC+GGG | 0.434591 | 1.4:-15031318 | None:intergenic |
| AGTGCTTACAATTTGGAAGT+AGG | 0.449828 | 1.4:+15034626 | MS.gene026651:CDS |
| TCGAGAGGCTTAATGAGGCT+TGG | 0.458763 | 1.4:+15034466 | MS.gene026651:CDS |
| AACTGCAGATGGTACACTTA+AGG | 0.462466 | 1.4:+15034170 | MS.gene026651:CDS |
| TTCCAAATACCAAGTTTGAA+AGG | 0.463827 | 1.4:-15031076 | None:intergenic |
| TCCAAATACCAAGTTTGAAA+GGG | 0.471833 | 1.4:-15031075 | None:intergenic |
| ATCAGATGGCCATATGGAAC+TGG | 0.472723 | 1.4:-15034058 | None:intergenic |
| CAATGGAAAATCGACAACTT+TGG | 0.488688 | 1.4:+15031028 | MS.gene026651:CDS |
| CCTGTGGATACTACATTCCT+TGG | 0.490016 | 1.4:+15033710 | MS.gene026651:CDS |
| GTATCTCAGAAGGGCCGTGC+AGG | 0.492268 | 1.4:-15034304 | None:intergenic |
| CCGAGTTAAGATCTTCAAGT+AGG | 0.498960 | 1.4:-15034434 | None:intergenic |
| TGATACAAGGCCTGAAACAC+AGG | 0.516846 | 1.4:-15034222 | None:intergenic |
| TTCGCTGCTCTTGTGATACA+AGG | 0.517258 | 1.4:-15034235 | None:intergenic |
| CAGGGGAAATGTAAAATTTG+CGG | 0.522009 | 1.4:-15031319 | None:intergenic |
| CCTACTTGAAGATCTTAACT+CGG | 0.524632 | 1.4:+15034434 | MS.gene026651:CDS |
| CCGAAGATTTCTGGAAGCAC+AGG | 0.532000 | 1.4:+15034346 | MS.gene026651:CDS |
| TTCCATACATGTATCTCAGA+AGG | 0.534119 | 1.4:-15034314 | None:intergenic |
| GTGGAGAAGCCAGTTCCATA+TGG | 0.542653 | 1.4:+15034049 | MS.gene026651:CDS |
| CAAGCATACGAGAGAGGCAT+CGG | 0.551846 | 1.4:-15034116 | None:intergenic |
| CTGAAACACAGGAGAGGTTG+CGG | 0.553064 | 1.4:-15034211 | None:intergenic |
| TGTTCTCGAGAGGCTTAATG+AGG | 0.554216 | 1.4:+15034461 | MS.gene026651:CDS |
| CAGCTGCACAAGTTGAAGAA+AGG | 0.554405 | 1.4:+15034495 | MS.gene026651:CDS |
| GCCCTTCTGAGATACATGTA+TGG | 0.555410 | 1.4:+15034312 | MS.gene026651:CDS |
| ACAAAACATGGGAGATTCGA+AGG | 0.560639 | 1.4:+15030982 | None:intergenic |
| AGTTCCATATGGCCATCTGA+TGG | 0.561027 | 1.4:+15034060 | MS.gene026651:CDS |
| AGATTTCTGGAAGCACAGGC+TGG | 0.562698 | 1.4:+15034350 | MS.gene026651:CDS |
| TAATGCCACAGTTCATGAAA+GGG | 0.567644 | 1.4:+15033658 | MS.gene026651:intron |
| GTAATGCCACAGTTCATGAA+AGG | 0.572992 | 1.4:+15033657 | MS.gene026651:intron |
| TGATGACTTTGTCTGGCCTG+TGG | 0.574666 | 1.4:+15033694 | MS.gene026651:CDS |
| CATTCAGAGGATGGATCTTG+AGG | 0.575267 | 1.4:-15033763 | None:intergenic |
| AATTAGAGACTCACATTCAG+AGG | 0.576553 | 1.4:-15033776 | None:intergenic |
| AGAGACTCACATTCAGAGGA+TGG | 0.576688 | 1.4:-15033772 | None:intergenic |
| CTCACCATTATAACTGCAGA+TGG | 0.586949 | 1.4:+15034159 | MS.gene026651:CDS |
| CATCAATAATCAAGCGACCA+AGG | 0.591316 | 1.4:-15033727 | None:intergenic |
| CTACTTGAAGATCTTAACTC+GGG | 0.596940 | 1.4:+15034435 | MS.gene026651:CDS |
| CCAAGGAATGTAGTATCCAC+AGG | 0.598731 | 1.4:-15033710 | None:intergenic |
| TCTGATTTCTTGTAAGAACA+TGG | 0.619813 | 1.4:-15031052 | None:intergenic |
| AGGCCAGACAAAGTCATCAC+AGG | 0.625083 | 1.4:-15033690 | None:intergenic |
| CTTCATCAAGCATACGAGAG+AGG | 0.633860 | 1.4:-15034122 | None:intergenic |
| AGAATGAAACGAGCAATAGG+AGG | 0.635724 | 1.4:-15031260 | None:intergenic |
| TCCATACATGTATCTCAGAA+GGG | 0.640688 | 1.4:-15034313 | None:intergenic |
| ACTCGGGAAATGTTCTCGAG+AGG | 0.641157 | 1.4:+15034451 | MS.gene026651:CDS |
| TGATCTCAAAGACGCATGCG+AGG | 0.646422 | 1.4:+15034407 | MS.gene026651:CDS |
| CATCTGCAGTTATAATGGTG+AGG | 0.666008 | 1.4:-15034158 | None:intergenic |
| TTTCCAACTGAGAGTCAGGG+TGG | 0.677946 | 1.4:+15034030 | MS.gene026651:intron |
| CATGTCAAAAGAGTCCTGCA+CGG | 0.708648 | 1.4:+15034290 | MS.gene026651:CDS |
| CAAGGCCTGAAACACAGGAG+AGG | 0.720476 | 1.4:-15034217 | None:intergenic |
| GGAAATGTAAAATTTGCGGG+AGG | 0.721522 | 1.4:-15031315 | None:intergenic |
| TGTTCCTTAGAAACACGCGA+AGG | 0.729696 | 1.4:-15031236 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAAAACTACAATGTT+GGG | - | chr1.4:15033339-15033358 | None:intergenic | 15.0% |
| !!! | ACTTATTTTTTGCAAATTTA+AGG | - | chr1.4:15033562-15033581 | None:intergenic | 15.0% |
| !!! | ATTATACTATGTTGAATTTT+TGG | + | chr1.4:15031131-15031150 | MS.gene026651:intron | 15.0% |
| !!! | CTTTTGTTAATAAAAAGTTT+AGG | + | chr1.4:15031841-15031860 | MS.gene026651:intron | 15.0% |
| !!! | TTATACTATGTTGAATTTTT+GGG | + | chr1.4:15031132-15031151 | MS.gene026651:intron | 15.0% |
| !! | AAATTTAGTAAACAAAAGAG+AGG | - | chr1.4:15033493-15033512 | None:intergenic | 20.0% |
| !! | AATCCTACTAATAAAATTCA+AGG | - | chr1.4:15031812-15031831 | None:intergenic | 20.0% |
| !! | AATTTAGTAAACAAAAGAGA+GGG | - | chr1.4:15033492-15033511 | None:intergenic | 20.0% |
| !! | ACTGATATTATAATCATCAA+AGG | - | chr1.4:15031645-15031664 | None:intergenic | 20.0% |
| !! | ATTATAATATCAGTTCCTAT+TGG | + | chr1.4:15031651-15031670 | MS.gene026651:intron | 20.0% |
| !! | CTGATATTATAATCATCAAA+GGG | - | chr1.4:15031644-15031663 | None:intergenic | 20.0% |
| !! | GATAAAAAAAACTACAATGT+TGG | - | chr1.4:15033340-15033359 | None:intergenic | 20.0% |
| !! | GCTATATTTAAATAGAGAAT+TGG | + | chr1.4:15033263-15033282 | MS.gene026651:intron | 20.0% |
| !! | GTAAGATCTAAACAATATTA+TGG | - | chr1.4:15032972-15032991 | None:intergenic | 20.0% |
| !! | TATTACAAAAAAAATGCTTC+TGG | + | chr1.4:15032853-15032872 | MS.gene026651:intron | 20.0% |
| !! | TGATGTAACTAGATATAATA+TGG | + | chr1.4:15033835-15033854 | MS.gene026651:intron | 20.0% |
| !!! | ATAGATTTTGAAAACTAGAT+TGG | + | chr1.4:15032315-15032334 | MS.gene026651:intron | 20.0% |
| !!! | ATTTCTTAATTTTGTTGTGT+AGG | - | chr1.4:15033237-15033256 | None:intergenic | 20.0% |
| !!! | TTTCTTAATTTTGTTGTGTA+GGG | - | chr1.4:15033236-15033255 | None:intergenic | 20.0% |
| ! | AAAAGGAAAGACAATAAAAC+AGG | - | chr1.4:15032363-15032382 | None:intergenic | 25.0% |
| ! | AATGATAGTTTAGAGAATGA+AGG | + | chr1.4:15032227-15032246 | MS.gene026651:intron | 25.0% |
| ! | ACAAATAGATAGTTGTAGAA+CGG | - | chr1.4:15033888-15033907 | None:intergenic | 25.0% |
| ! | AGAGTAAAGTGTGATAATTA+AGG | + | chr1.4:15032493-15032512 | MS.gene026651:intron | 25.0% |
| ! | ATAAAAAGTTTAGGTGAGTT+TGG | + | chr1.4:15031850-15031869 | MS.gene026651:intron | 25.0% |
| ! | ATAAATTAAGCTGCACATAA+AGG | + | chr1.4:15033039-15033058 | MS.gene026651:intron | 25.0% |
| ! | ATCCTACTAATAGTCAATAA+AGG | - | chr1.4:15032134-15032153 | None:intergenic | 25.0% |
| ! | ATTCTCTAAACTATCATTAG+TGG | - | chr1.4:15032225-15032244 | None:intergenic | 25.0% |
| ! | CTAACTAATCTTTACAAAAC+CGG | - | chr1.4:15031755-15031774 | None:intergenic | 25.0% |
| ! | GAGTAAAGTGTGATAATTAA+GGG | + | chr1.4:15032494-15032513 | MS.gene026651:intron | 25.0% |
| ! | GATTGTTAACATACAACAAT+AGG | - | chr1.4:15032757-15032776 | None:intergenic | 25.0% |
| ! | TAAATTAAGCTGCACATAAA+GGG | + | chr1.4:15033040-15033059 | MS.gene026651:intron | 25.0% |
| ! | TACTAATAGTCAATAAAGGT+TGG | - | chr1.4:15032130-15032149 | None:intergenic | 25.0% |
| ! | TATATCTATAAATCCAAGAC+AGG | - | chr1.4:15033455-15033474 | None:intergenic | 25.0% |
| ! | TTGAAATTTCGATACATTGA+GGG | + | chr1.4:15031570-15031589 | MS.gene026651:intron | 25.0% |
| ! | TTGAAATTTCGATACATTGA+GGG | - | chr1.4:15031589-15031570 | None:intergenic | 25.0% |
| ! | TTTGTTAGTCAAAATAGTGT+GGG | - | chr1.4:15031530-15031549 | None:intergenic | 25.0% |
| !! | AACCTTTATTGACTATTAGT+AGG | + | chr1.4:15032129-15032148 | MS.gene026651:intron | 25.0% |
| !! | AGTCACGATTTTCAATTTAT+GGG | + | chr1.4:15032276-15032295 | MS.gene026651:intron | 25.0% |
| !! | TATTGAATGGAATGCATTTT+AGG | + | chr1.4:15032712-15032731 | MS.gene026651:intron | 25.0% |
| !! | TCTCCTTGAATTTTATTAGT+AGG | + | chr1.4:15031806-15031825 | MS.gene026651:intron | 25.0% |
| !! | TTTGAAATTTCGATACATTG+AGG | + | chr1.4:15031569-15031588 | MS.gene026651:intron | 25.0% |
| !! | TTTGAAATTTCGATACATTG+AGG | - | chr1.4:15031588-15031569 | None:intergenic | 25.0% |
| !!! | AGAATGAAGGTTTTTTATGA+TGG | + | chr1.4:15032240-15032259 | MS.gene026651:intron | 25.0% |
| !!! | ATTAGCTCTGTATTTATTGT+TGG | - | chr1.4:15033524-15033543 | None:intergenic | 25.0% |
| !!! | GAATCACTATTTTGATCATT+GGG | + | chr1.4:15031427-15031446 | MS.gene026651:intron | 25.0% |
| !!! | TGAATCACTATTTTGATCAT+TGG | + | chr1.4:15031426-15031445 | MS.gene026651:intron | 25.0% |
| !!! | TTCTTAATTTTGTTGTGTAG+GGG | - | chr1.4:15033235-15033254 | None:intergenic | 25.0% |
| !!! | TTTACTATGTTGTTGTTTTC+AGG | + | chr1.4:15031162-15031181 | MS.gene026651:intron | 25.0% |
| AAAAAAAATGCTTCTGGATC+TGG | + | chr1.4:15032859-15032878 | MS.gene026651:intron | 30.0% | |
| AACATTATCCCTTTCAAACA+CGG | - | chr1.4:15032443-15032462 | None:intergenic | 30.0% | |
| AAGAATCCATATCAATCAAC+GGG | - | chr1.4:15032202-15032221 | None:intergenic | 30.0% | |
| AAGAGATAACATACTAACCA+GGG | - | chr1.4:15031340-15031359 | None:intergenic | 30.0% | |
| AAGTCTCAATATCAAGCAAA+AGG | - | chr1.4:15032380-15032399 | None:intergenic | 30.0% | |
| ACAATTTAACACTAGTTCAG+AGG | - | chr1.4:15033993-15034012 | None:intergenic | 30.0% | |
| ACACTATCTTTCAATGATGT+AGG | - | chr1.4:15031688-15031707 | None:intergenic | 30.0% | |
| ACTAAGGAAATACTCAAGAA+GGG | + | chr1.4:15032583-15032602 | MS.gene026651:intron | 30.0% | |
| ATCACCATAAAAAGTTTCTG+CGG | + | chr1.4:15033357-15033376 | MS.gene026651:intron | 30.0% | |
| ATCACTGATGTCGTATTTAT+TGG | - | chr1.4:15034391-15034410 | None:intergenic | 30.0% | |
| ATTTCCTTAGTATCGTAGTA+AGG | - | chr1.4:15032574-15032593 | None:intergenic | 30.0% | |
| CATTGGGATAATAGTCAATT+TGG | + | chr1.4:15031443-15031462 | MS.gene026651:intron | 30.0% | |
| CTTTGTTAGTCAAAATAGTG+TGG | - | chr1.4:15031531-15031550 | None:intergenic | 30.0% | |
| GAAGAATCCATATCAATCAA+CGG | - | chr1.4:15032203-15032222 | None:intergenic | 30.0% | |
| GATAATTAAGGGTTCTTACA+GGG | + | chr1.4:15032505-15032524 | MS.gene026651:intron | 30.0% | |
| GTTTGAAAGGGATAATGTTT+GGG | + | chr1.4:15032444-15032463 | MS.gene026651:intron | 30.0% | |
| TAAGAGATAACATACTAACC+AGG | - | chr1.4:15031341-15031360 | None:intergenic | 30.0% | |
| TACTAAGGAAATACTCAAGA+AGG | + | chr1.4:15032582-15032601 | MS.gene026651:intron | 30.0% | |
| TAGTAGGATTATTAGCAGTA+GGG | + | chr1.4:15032145-15032164 | MS.gene026651:intron | 30.0% | |
| TCCAAATACCAAGTTTGAAA+GGG | - | chr1.4:15031078-15031097 | None:intergenic | 30.0% | |
| TCTGATTTCTTGTAAGAACA+TGG | - | chr1.4:15031055-15031074 | None:intergenic | 30.0% | |
| TGATAATTAAGGGTTCTTAC+AGG | + | chr1.4:15032504-15032523 | MS.gene026651:intron | 30.0% | |
| TGTTTGAAAGGGATAATGTT+TGG | + | chr1.4:15032443-15032462 | MS.gene026651:intron | 30.0% | |
| TTAGTAGGATTATTAGCAGT+AGG | + | chr1.4:15032144-15032163 | MS.gene026651:intron | 30.0% | |
| TTCCAAATACCAAGTTTGAA+AGG | - | chr1.4:15031079-15031098 | None:intergenic | 30.0% | |
| TTTGAAAGGGATAATGTTTG+GGG | + | chr1.4:15032445-15032464 | MS.gene026651:intron | 30.0% | |
| ! | CAAAGGGATAATAGTCATTT+TGG | - | chr1.4:15031628-15031647 | None:intergenic | 30.0% |
| ! | GAGTCACGATTTTCAATTTA+TGG | + | chr1.4:15032275-15032294 | MS.gene026651:intron | 30.0% |
| ! | TGGTTATTTGTTACACATTC+AGG | + | chr1.4:15031600-15031619 | MS.gene026651:intron | 30.0% |
| ! | TTCGCATTCTTGTTTGATTT+CGG | + | chr1.4:15034522-15034541 | MS.gene026651:CDS | 30.0% |
| ! | TTTACCGCAGAAACTTTTTA+TGG | - | chr1.4:15033364-15033383 | None:intergenic | 30.0% |
| !! | CGGTTTTGTAAAGATTAGTT+AGG | + | chr1.4:15031753-15031772 | MS.gene026651:intron | 30.0% |
| !! | TTCAAGAAGTGCTTACAATT+TGG | + | chr1.4:15034619-15034638 | MS.gene026651:CDS | 30.0% |
| !!! | ACAGGGTAAGATTTAGTTTT+AGG | + | chr1.4:15032522-15032541 | MS.gene026651:intron | 30.0% |
| !!! | ATTGTTTTGAGTTACTCAAC+AGG | + | chr1.4:15033923-15033942 | MS.gene026651:intron | 30.0% |
| !!! | TTTAGGTTATTTTTCCCCAT+TGG | + | chr1.4:15032539-15032558 | MS.gene026651:intron | 30.0% |
| AAATCAGACCCTTTCAAACT+TGG | + | chr1.4:15031067-15031086 | MS.gene026651:CDS | 35.0% | |
| AACCTCTTGTGTGAAAACAA+GGG | - | chr1.4:15033145-15033164 | None:intergenic | 35.0% | |
| AATTAGAGACTCACATTCAG+AGG | - | chr1.4:15033779-15033798 | None:intergenic | 35.0% | |
| ACCCTTTCAAACTTGGTATT+TGG | + | chr1.4:15031074-15031093 | MS.gene026651:CDS | 35.0% | |
| AGAAGAAGAAGAAGCAGTAT+TGG | - | chr1.4:15031294-15031313 | None:intergenic | 35.0% | |
| AGAATCCATATCAATCAACG+GGG | - | chr1.4:15032201-15032220 | None:intergenic | 35.0% | |
| AGAGATAACATACTAACCAG+GGG | - | chr1.4:15031339-15031358 | None:intergenic | 35.0% | |
| AGGGGAAATGTAAAATTTGC+GGG | - | chr1.4:15031321-15031340 | None:intergenic | 35.0% | |
| AGTAAGGACTAAAGAACCAA+TGG | - | chr1.4:15032558-15032577 | None:intergenic | 35.0% | |
| ATCTTTCACCTTACAAAAGC+CGG | + | chr1.4:15031733-15031752 | MS.gene026651:intron | 35.0% | |
| ATTTGTCGATAGAGAGAAAC+AGG | + | chr1.4:15031186-15031205 | MS.gene026651:CDS | 35.0% | |
| CAATAAAACCCGAAGATTTC+TGG | + | chr1.4:15034337-15034356 | MS.gene026651:CDS | 35.0% | |
| CAATGGAAAATCGACAACTT+TGG | + | chr1.4:15031028-15031047 | MS.gene026651:CDS | 35.0% | |
| CAGGGGAAATGTAAAATTTG+CGG | - | chr1.4:15031322-15031341 | None:intergenic | 35.0% | |
| CCTACTTGAAGATCTTAACT+CGG | + | chr1.4:15034434-15034453 | MS.gene026651:CDS | 35.0% | |
| CTACTTGAAGATCTTAACTC+GGG | + | chr1.4:15034435-15034454 | MS.gene026651:CDS | 35.0% | |
| GTAAGGACTAAAGAACCAAT+GGG | - | chr1.4:15032557-15032576 | None:intergenic | 35.0% | |
| TAAGGACTAAAGAACCAATG+GGG | - | chr1.4:15032556-15032575 | None:intergenic | 35.0% | |
| TAATGCCACAGTTCATGAAA+GGG | + | chr1.4:15033658-15033677 | MS.gene026651:intron | 35.0% | |
| TAGTCCTTACTACGATACTA+AGG | + | chr1.4:15032567-15032586 | MS.gene026651:intron | 35.0% | |
| TCATACCTCTTAAACTGTTG+CGG | + | chr1.4:15032675-15032694 | MS.gene026651:intron | 35.0% | |
| TCCATACATGTATCTCAGAA+GGG | - | chr1.4:15034316-15034335 | None:intergenic | 35.0% | |
| TCTTTCAATGATGTAGGACT+TGG | - | chr1.4:15031682-15031701 | None:intergenic | 35.0% | |
| TGTACCATCTGCAGTTATAA+TGG | - | chr1.4:15034166-15034185 | None:intergenic | 35.0% | |
| TTACTCTTTACTCACTTCAG+AGG | - | chr1.4:15032480-15032499 | None:intergenic | 35.0% | |
| TTCACCATACAATCTTGAAG+TGG | - | chr1.4:15033606-15033625 | None:intergenic | 35.0% | |
| TTCCATACATGTATCTCAGA+AGG | - | chr1.4:15034317-15034336 | None:intergenic | 35.0% | |
| TTGAAAGGGATAATGTTTGG+GGG | + | chr1.4:15032446-15032465 | MS.gene026651:intron | 35.0% | |
| ! | ACAATCTAAATGATGACGTC+TGG | + | chr1.4:15032771-15032790 | MS.gene026651:intron | 35.0% |
| ! | CGATTTTCCATTGAGCTAAT+CGG | - | chr1.4:15031021-15031040 | None:intergenic | 35.0% |
| ! | CTTTTGACATGTCTTCTATG+TGG | - | chr1.4:15034281-15034300 | None:intergenic | 35.0% |
| ! | GATTTTCCATTGAGCTAATC+GGG | - | chr1.4:15031020-15031039 | None:intergenic | 35.0% |
| ! | TCAAACTTGGTATTTGGAAC+TGG | + | chr1.4:15031080-15031099 | MS.gene026651:CDS | 35.0% |
| ! | TGATGACGTCTGGTAAATTA+CGG | + | chr1.4:15032781-15032800 | MS.gene026651:intron | 35.0% |
| ! | TTTTGTATCAGGAAACATGC+TGG | + | chr1.4:15033002-15033021 | MS.gene026651:intron | 35.0% |
| !! | ACTTTGAGATTATTAGCTCG+TGG | - | chr1.4:15033304-15033323 | None:intergenic | 35.0% |
| !! | CAACACTCAAGTTTTGTATC+AGG | + | chr1.4:15032991-15033010 | MS.gene026651:intron | 35.0% |
| !! | TAGGACTTGGTTTTTCCAAT+AGG | - | chr1.4:15031669-15031688 | None:intergenic | 35.0% |
| !! | TCCAGAAGAGACTGATTTTT+GGG | + | chr1.4:15032608-15032627 | MS.gene026651:intron | 35.0% |
| !! | TTACAAAACCGGCTTTTGTA+AGG | - | chr1.4:15031744-15031763 | None:intergenic | 35.0% |
| !!! | GAAGGTTTTTTATGATGGAG+AGG | + | chr1.4:15032245-15032264 | MS.gene026651:intron | 35.0% |
| !!! | TTTTTTCCAACTGAGAGTCA+GGG | + | chr1.4:15034027-15034046 | MS.gene026651:intron | 35.0% |
| !!! | TTTTTTTCCAACTGAGAGTC+AGG | + | chr1.4:15034026-15034045 | MS.gene026651:intron | 35.0% |
| AACGTGAGAATCTCTTTGGT+GGG | - | chr1.4:15032048-15032067 | None:intergenic | 40.0% | |
| AACTCCTTACCAACTGAGTT+GGG | + | chr1.4:15031974-15031993 | MS.gene026651:intron | 40.0% | |
| AACTGCAGATGGTACACTTA+AGG | + | chr1.4:15034170-15034189 | MS.gene026651:CDS | 40.0% | |
| ACCCAAAAATCAGTCTCTTC+TGG | - | chr1.4:15032612-15032631 | None:intergenic | 40.0% | |
| AGAATGAAACGAGCAATAGG+AGG | - | chr1.4:15031263-15031282 | None:intergenic | 40.0% | |
| AGGATTATTAGCAGTAGGGT+TGG | + | chr1.4:15032149-15032168 | MS.gene026651:intron | 40.0% | |
| AGTTTGACTCATATCCGCAA+GGG | - | chr1.4:15032093-15032112 | None:intergenic | 40.0% | |
| ATCGAGAGTTAGAGGAAATG+AGG | - | chr1.4:15032420-15032439 | None:intergenic | 40.0% | |
| CAACCTCTTGTGTGAAAACA+AGG | - | chr1.4:15033146-15033165 | None:intergenic | 40.0% | |
| CAAGGGAGACAATAATAAGC+AGG | - | chr1.4:15032929-15032948 | None:intergenic | 40.0% | |
| CAGGTCACTAGATCTACAAT+TGG | - | chr1.4:15033436-15033455 | None:intergenic | 40.0% | |
| CATCAATAATCAAGCGACCA+AGG | - | chr1.4:15033730-15033749 | None:intergenic | 40.0% | |
| CATCTGCAGTTATAATGGTG+AGG | - | chr1.4:15034161-15034180 | None:intergenic | 40.0% | |
| CCGAGTTAAGATCTTCAAGT+AGG | - | chr1.4:15034437-15034456 | None:intergenic | 40.0% | |
| CGAAGAATGAAACGAGCAAT+AGG | - | chr1.4:15031266-15031285 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr1.4:15033114-15033133 | None:intergenic | 40.0% | |
| CTCACCATTATAACTGCAGA+TGG | + | chr1.4:15034159-15034178 | MS.gene026651:CDS | 40.0% | |
| CTTGTGTGAAAACAAGGGTA+AGG | - | chr1.4:15033140-15033159 | None:intergenic | 40.0% | |
| GATACATTGAGGGACTATTG+TGG | + | chr1.4:15031580-15031599 | MS.gene026651:intron | 40.0% | |
| GATACATTGAGGGACTATTG+TGG | - | chr1.4:15031599-15031580 | None:intergenic | 40.0% | |
| GATGACGTCTGGTAAATTAC+GGG | + | chr1.4:15032782-15032801 | MS.gene026651:intron | 40.0% | |
| GGAAATGTAAAATTTGCGGG+AGG | - | chr1.4:15031318-15031337 | None:intergenic | 40.0% | |
| GTAATGCCACAGTTCATGAA+AGG | + | chr1.4:15033657-15033676 | MS.gene026651:intron | 40.0% | |
| GTATGGTGAAATGCTGATAG+AGG | + | chr1.4:15033616-15033635 | MS.gene026651:intron | 40.0% | |
| GTTTCTGCGGTAAACTCATA+TGG | + | chr1.4:15033370-15033389 | MS.gene026651:intron | 40.0% | |
| TCATGAACTGTGGCATTACA+GGG | - | chr1.4:15033656-15033675 | None:intergenic | 40.0% | |
| TGAAAGGGATAATGTTTGGG+GGG | + | chr1.4:15032447-15032466 | MS.gene026651:intron | 40.0% | |
| TGGACTGCAAACATGAACTA+AGG | + | chr1.4:15032169-15032188 | MS.gene026651:intron | 40.0% | |
| TGTCAACGTGAGAATCTCTT+TGG | - | chr1.4:15032052-15032071 | None:intergenic | 40.0% | |
| TTCATGAACTGTGGCATTAC+AGG | - | chr1.4:15033657-15033676 | None:intergenic | 40.0% | |
| ! | AATGTCCCCGTTGATTGATA+TGG | + | chr1.4:15032193-15032212 | MS.gene026651:intron | 40.0% |
| ! | AGTTTAGGTGAGTTTGGTTC+CGG | + | chr1.4:15031856-15031875 | MS.gene026651:intron | 40.0% |
| ! | CAATTTCCCGATTAGCTCAA+TGG | + | chr1.4:15031011-15031030 | MS.gene026651:CDS | 40.0% |
| ! | CGCAAATTTTACATTTCCCC+TGG | + | chr1.4:15031320-15031339 | MS.gene026651:CDS | 40.0% |
| ! | GAATGCAGTTTTCCATCAGA+TGG | - | chr1.4:15034075-15034094 | None:intergenic | 40.0% |
| ! | GGCTACTTGTTACACATTCA+GGG | - | chr1.4:15031470-15031489 | None:intergenic | 40.0% |
| ! | TCAATAAAGGTTGGCTCAGT+TGG | - | chr1.4:15032121-15032140 | None:intergenic | 40.0% |
| ! | TGGCTACTTGTTACACATTC+AGG | - | chr1.4:15031471-15031490 | None:intergenic | 40.0% |
| ! | TTTTCCATCAGATGGCCATA+TGG | - | chr1.4:15034067-15034086 | None:intergenic | 40.0% |
| !! | AGAAGAGACTGATTTTTGGG+TGG | + | chr1.4:15032611-15032630 | MS.gene026651:intron | 40.0% |
| !! | GGGAAAAGAGAGGTATTGAA+TGG | + | chr1.4:15032699-15032718 | MS.gene026651:intron | 40.0% |
| !! | GTCCAGAAGAGACTGATTTT+TGG | + | chr1.4:15032607-15032626 | MS.gene026651:intron | 40.0% |
| !! | TGTGCCACTTCAAGATTGTA+TGG | + | chr1.4:15033599-15033618 | MS.gene026651:intron | 40.0% |
| !!! | AAGAGACTGATTTTTGGGTG+GGG | + | chr1.4:15032613-15032632 | MS.gene026651:intron | 40.0% |
| !!! | GAAGAGACTGATTTTTGGGT+GGG | + | chr1.4:15032612-15032631 | MS.gene026651:intron | 40.0% |
| !!! | GTTTTTTCGTCATGCAGACA+GGG | + | chr1.4:15034578-15034597 | MS.gene026651:CDS | 40.0% |
| !!! | TACCCTTGTTTTCACACAAG+AGG | + | chr1.4:15033140-15033159 | MS.gene026651:intron | 40.0% |
| AAACACGGATCGAGAGTTAG+AGG | - | chr1.4:15032428-15032447 | None:intergenic | 45.0% | |
| AAGCACCCTTTCATGAACTG+TGG | - | chr1.4:15033666-15033685 | None:intergenic | 45.0% | |
| ACCTCTTAAACTGTTGCGGA+GGG | + | chr1.4:15032679-15032698 | MS.gene026651:intron | 45.0% | |
| ACTCTCGATCCGTGTTTGAA+AGG | + | chr1.4:15032431-15032450 | MS.gene026651:intron | 45.0% | |
| AGAGACTCACATTCAGAGGA+TGG | - | chr1.4:15033775-15033794 | None:intergenic | 45.0% | |
| AGGATTCGTCAGATGATGCA+GGG | - | chr1.4:15032909-15032928 | None:intergenic | 45.0% | |
| AGTTCCATATGGCCATCTGA+TGG | + | chr1.4:15034060-15034079 | MS.gene026651:CDS | 45.0% | |
| AGTTGGATTCATATCCCGCA+AGG | - | chr1.4:15031958-15031977 | None:intergenic | 45.0% | |
| ATCAGATGGCCATATGGAAC+TGG | - | chr1.4:15034061-15034080 | None:intergenic | 45.0% | |
| CAACGTGAGAATCTCTTTGG+TGG | - | chr1.4:15032049-15032068 | None:intergenic | 45.0% | |
| CAACTCCTTACCAACTGAGT+TGG | + | chr1.4:15031973-15031992 | MS.gene026651:intron | 45.0% | |
| CACCAAAGAGATTCTCATGC+GGG | + | chr1.4:15031911-15031930 | MS.gene026651:intron | 45.0% | |
| CATGTCAAAAGAGTCCTGCA+CGG | + | chr1.4:15034290-15034309 | MS.gene026651:CDS | 45.0% | |
| CATTCAGAGGATGGATCTTG+AGG | - | chr1.4:15033766-15033785 | None:intergenic | 45.0% | |
| CCAAGGAATGTAGTATCCAC+AGG | - | chr1.4:15033713-15033732 | None:intergenic | 45.0% | |
| CCACCAAAGAGATTCTCATG+CGG | + | chr1.4:15031910-15031929 | MS.gene026651:intron | 45.0% | |
| CCTGTGCTTCCAGAAATCTT+CGG | - | chr1.4:15034349-15034368 | None:intergenic | 45.0% | |
| CCTGTGGATACTACATTCCT+TGG | + | chr1.4:15033710-15033729 | MS.gene026651:CDS | 45.0% | |
| CGCATGAGAATCTCTTTGGT+GGG | - | chr1.4:15031912-15031931 | None:intergenic | 45.0% | |
| CTCTCGATCCGTGTTTGAAA+GGG | + | chr1.4:15032432-15032451 | MS.gene026651:intron | 45.0% | |
| CTGTGCTTCCAGAAATCTTC+GGG | - | chr1.4:15034348-15034367 | None:intergenic | 45.0% | |
| CTTCATCAAGCATACGAGAG+AGG | - | chr1.4:15034125-15034144 | None:intergenic | 45.0% | |
| CTTTCTTCAACTTGTGCAGC+TGG | - | chr1.4:15034497-15034516 | None:intergenic | 45.0% | |
| GAACCTGTGATGACTTTGTC+TGG | + | chr1.4:15033687-15033706 | MS.gene026651:CDS | 45.0% | |
| GAGTTTGACTCATATCCGCA+AGG | - | chr1.4:15032094-15032113 | None:intergenic | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr1.4:15033115-15033134 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr1.4:15033118-15033137 | None:intergenic | 45.0% | |
| GTAGATCTAGTGACCTGTCT+TGG | + | chr1.4:15033439-15033458 | MS.gene026651:intron | 45.0% | |
| GTCACGTGACTGAAAGGTTA+CGG | - | chr1.4:15033185-15033204 | None:intergenic | 45.0% | |
| GTTGGATTCATATCCCGCAA+GGG | - | chr1.4:15031957-15031976 | None:intergenic | 45.0% | |
| TACCTCTTAAACTGTTGCGG+AGG | + | chr1.4:15032678-15032697 | MS.gene026651:intron | 45.0% | |
| TCACGTGACTGAAAGGTTAC+GGG | - | chr1.4:15033184-15033203 | None:intergenic | 45.0% | |
| TGATACAAGGCCTGAAACAC+AGG | - | chr1.4:15034225-15034244 | None:intergenic | 45.0% | |
| TGTTCCTTAGAAACACGCGA+AGG | - | chr1.4:15031239-15031258 | None:intergenic | 45.0% | |
| TGTTCTCGAGAGGCTTAATG+AGG | + | chr1.4:15034461-15034480 | MS.gene026651:CDS | 45.0% | |
| TTAGAAACACGCGAAGGTTC+AGG | - | chr1.4:15031233-15031252 | None:intergenic | 45.0% | |
| TTCGCTGCTCTTGTGATACA+AGG | - | chr1.4:15034238-15034257 | None:intergenic | 45.0% | |
| ! | AAAGGTTGGCTCAGTTGGTA+AGG | - | chr1.4:15032116-15032135 | None:intergenic | 45.0% |
| ! | CAGCTGCACAAGTTGAAGAA+AGG | + | chr1.4:15034495-15034514 | MS.gene026651:CDS | 45.0% |
| ! | GTTTAGGTGAGTTTGGTTCC+GGG | + | chr1.4:15031857-15031876 | MS.gene026651:intron | 45.0% |
| ! | TCACACAAGAGGTTGTTTCC+AGG | + | chr1.4:15033151-15033170 | MS.gene026651:intron | 45.0% |
| ! | TGAACCTTCGCGTGTTTCTA+AGG | + | chr1.4:15031232-15031251 | MS.gene026651:CDS | 45.0% |
| ! | TTTAGGTGAGTTTGGTTCCG+GGG | + | chr1.4:15031858-15031877 | MS.gene026651:intron | 45.0% |
| !! | CAACTCAGTTGGTAAGGAGT+TGG | - | chr1.4:15031975-15031994 | None:intergenic | 45.0% |
| !! | GCCCTTCTGAGATACATGTA+TGG | + | chr1.4:15034312-15034331 | MS.gene026651:CDS | 45.0% |
| !!! | CGTTTTTTCGTCATGCAGAC+AGG | + | chr1.4:15034577-15034596 | MS.gene026651:CDS | 45.0% |
| AAGGTTACGGGTTCAAGTCC+TGG | - | chr1.4:15033172-15033191 | None:intergenic | 50.0% | |
| ACGACAGTGAATGCAGATGC+AGG | - | chr1.4:15032820-15032839 | None:intergenic | 50.0% | |
| ACTAAAGCTCCCGCATATGC+AGG | + | chr1.4:15033074-15033093 | MS.gene026651:intron | 50.0% | |
| ACTAGTTCAGAGGTTCGCTG+AGG | - | chr1.4:15033983-15034002 | None:intergenic | 50.0% | |
| ACTCGGGAAATGTTCTCGAG+AGG | + | chr1.4:15034451-15034470 | MS.gene026651:CDS | 50.0% | |
| AGGCCAGACAAAGTCATCAC+AGG | - | chr1.4:15033693-15033712 | None:intergenic | 50.0% | |
| ATTATTGTCTCCCTTGCCCC+AGG | + | chr1.4:15032933-15032952 | MS.gene026651:intron | 50.0% | |
| CAGGATTCGTCAGATGATGC+AGG | - | chr1.4:15032910-15032929 | None:intergenic | 50.0% | |
| CCGCATGAGAATCTCTTTGG+TGG | - | chr1.4:15031913-15031932 | None:intergenic | 50.0% | |
| CTAAAGCTCCCGCATATGCA+GGG | + | chr1.4:15033075-15033094 | MS.gene026651:intron | 50.0% | |
| CTAGTTCAGAGGTTCGCTGA+GGG | - | chr1.4:15033982-15034001 | None:intergenic | 50.0% | |
| CTGAAACACAGGAGAGGTTG+CGG | - | chr1.4:15034214-15034233 | None:intergenic | 50.0% | |
| GCAACTTTACTGTTGCGCCA+AGG | + | chr1.4:15033206-15033225 | MS.gene026651:intron | 50.0% | |
| GTGGAGAAGCCAGTTCCATA+TGG | + | chr1.4:15034049-15034068 | MS.gene026651:CDS | 50.0% | |
| GTTGCTGTCACGTGACTGAA+AGG | - | chr1.4:15033191-15033210 | None:intergenic | 50.0% | |
| TCCCTCCGCAACAGTTTAAG+AGG | - | chr1.4:15032683-15032702 | None:intergenic | 50.0% | |
| TCGAGAGGCTTAATGAGGCT+TGG | + | chr1.4:15034466-15034485 | MS.gene026651:CDS | 50.0% | |
| TGATCTCAAAGACGCATGCG+AGG | + | chr1.4:15034407-15034426 | MS.gene026651:CDS | 50.0% | |
| TGATGACTTTGTCTGGCCTG+TGG | + | chr1.4:15033694-15033713 | MS.gene026651:CDS | 50.0% | |
| TGCCCGCATGAGAATCTCTT+TGG | - | chr1.4:15031916-15031935 | None:intergenic | 50.0% | |
| TTGTTGTGTAGGGGAAGCCT+TGG | - | chr1.4:15033226-15033245 | None:intergenic | 50.0% | |
| TTTCCAACTGAGAGTCAGGG+TGG | + | chr1.4:15034030-15034049 | MS.gene026651:intron | 50.0% | |
| ! | AGATTTCTGGAAGCACAGGC+TGG | + | chr1.4:15034350-15034369 | MS.gene026651:CDS | 50.0% |
| ! | CAAGCATACGAGAGAGGCAT+CGG | - | chr1.4:15034119-15034138 | None:intergenic | 50.0% |
| ! | CCGAAGATTTCTGGAAGCAC+AGG | + | chr1.4:15034346-15034365 | MS.gene026651:CDS | 50.0% |
| ! | GAAGCCCAACTCAGTTGGTA+AGG | - | chr1.4:15031981-15032000 | None:intergenic | 50.0% |
| AAGCACAGGCTGGCATTGCT+TGG | + | chr1.4:15034360-15034379 | MS.gene026651:CDS | 55.0% | |
| ATTCATATCCCGCAAGGGCG+TGG | - | chr1.4:15031952-15031971 | None:intergenic | 55.0% | |
| CAAGGCCTGAAACACAGGAG+AGG | - | chr1.4:15034220-15034239 | None:intergenic | 55.0% | |
| CATATGCAGGGTTCGGGAAG+GGG | + | chr1.4:15033087-15033106 | MS.gene026651:intron | 55.0% | |
| CGCAACCTCTCCTGTGTTTC+AGG | + | chr1.4:15034212-15034231 | MS.gene026651:CDS | 55.0% | |
| CTGTTGCGGAGGGAAAAGAG+AGG | + | chr1.4:15032689-15032708 | MS.gene026651:intron | 55.0% | |
| CTTCCCGAACCCTGCATATG+CGG | - | chr1.4:15033087-15033106 | None:intergenic | 55.0% | |
| GCATATGCAGGGTTCGGGAA+GGG | + | chr1.4:15033086-15033105 | MS.gene026651:intron | 55.0% | |
| TCTCCACCCTGACTCTCAGT+TGG | - | chr1.4:15034036-15034055 | None:intergenic | 55.0% | |
| TTCCCGAACCCTGCATATGC+GGG | - | chr1.4:15033086-15033105 | None:intergenic | 55.0% | |
| TTGGGCTTCGAGGCTGACTA+GGG | + | chr1.4:15031992-15032011 | MS.gene026651:intron | 55.0% | |
| TTGGTTCCGGGGCTGACTAA+GGG | + | chr1.4:15031869-15031888 | MS.gene026651:intron | 55.0% | |
| ! | ACCAACTGAGTTGGGCTTCG+AGG | + | chr1.4:15031982-15032001 | MS.gene026651:intron | 55.0% |
| ! | ACTCATATCCGCAAGGGCGT+GGG | - | chr1.4:15032087-15032106 | None:intergenic | 55.0% |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | - | chr1.4:15033070-15033089 | None:intergenic | 55.0% |
| ! | TTCATATCCCGCAAGGGCGT+GGG | - | chr1.4:15031951-15031970 | None:intergenic | 55.0% |
| ! | TTTGGTTCCGGGGCTGACTA+AGG | + | chr1.4:15031868-15031887 | MS.gene026651:intron | 55.0% |
| AGTTGTACCCACGCCCTTGC+GGG | + | chr1.4:15031941-15031960 | MS.gene026651:intron | 60.0% | |
| ATGGCTATCCCCTGCTGCCT+GGG | - | chr1.4:15032953-15032972 | None:intergenic | 60.0% | |
| CGCATATGCAGGGTTCGGGA+AGG | + | chr1.4:15033085-15033104 | MS.gene026651:intron | 60.0% | |
| CTCCCGCATATGCAGGGTTC+GGG | + | chr1.4:15033081-15033100 | MS.gene026651:intron | 60.0% | |
| GACTCATATCCGCAAGGGCG+TGG | - | chr1.4:15032088-15032107 | None:intergenic | 60.0% | |
| GAGCTATACCCACGCCCTTG+CGG | + | chr1.4:15032076-15032095 | MS.gene026651:intron | 60.0% | |
| GAGTTGTACCCACGCCCTTG+CGG | + | chr1.4:15031940-15031959 | MS.gene026651:intron | 60.0% | |
| GCCTCGAAGCCCAACTCAGT+TGG | - | chr1.4:15031986-15032005 | None:intergenic | 60.0% | |
| GCTCCCGCATATGCAGGGTT+CGG | + | chr1.4:15033080-15033099 | MS.gene026651:intron | 60.0% | |
| GCTGCACATAAAGGGCAGCC+CGG | + | chr1.4:15033048-15033067 | MS.gene026651:intron | 60.0% | |
| GGCTGACTAGGGGTCAAGAC+AGG | + | chr1.4:15032003-15032022 | MS.gene026651:intron | 60.0% | |
| GTATCTCAGAAGGGCCGTGC+AGG | - | chr1.4:15034307-15034326 | None:intergenic | 60.0% | |
| GTTGGGCTTCGAGGCTGACT+AGG | + | chr1.4:15031991-15032010 | MS.gene026651:intron | 60.0% | |
| TATGGCTATCCCCTGCTGCC+TGG | - | chr1.4:15032954-15032973 | None:intergenic | 60.0% | |
| TGGGCTTCGAGGCTGACTAG+GGG | + | chr1.4:15031993-15032012 | MS.gene026651:intron | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | - | chr1.4:15033069-15033088 | None:intergenic | 60.0% |
| CCTCGACCCTTAGTCAGCCC+CGG | - | chr1.4:15031878-15031897 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr1.4:15033100-15033119 | MS.gene026651:intron | 65.0% | |
| TGGCTATCCCCTGCTGCCTG+GGG | - | chr1.4:15032952-15032971 | None:intergenic | 65.0% | |
| ATCCCCTGCTGCCTGGGGCA+AGG | - | chr1.4:15032947-15032966 | None:intergenic | 70.0% | |
| CCGGGGCTGACTAAGGGTCG+AGG | + | chr1.4:15031875-15031894 | MS.gene026651:intron | 70.0% | |
| CTCCCTTGCCCCAGGCAGCA+GGG | + | chr1.4:15032941-15032960 | MS.gene026651:intron | 70.0% | |
| TCCCCTGCTGCCTGGGGCAA+GGG | - | chr1.4:15032946-15032965 | None:intergenic | 70.0% | |
| TCCCTTGCCCCAGGCAGCAG+GGG | + | chr1.4:15032942-15032961 | MS.gene026651:intron | 70.0% | |
| TCTCCCTTGCCCCAGGCAGC+AGG | + | chr1.4:15032940-15032959 | MS.gene026651:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 15030989 | 15034647 | 15030989 | ID=MS.gene026651 |
| chr1.4 | mRNA | 15030989 | 15034647 | 15030989 | ID=MS.gene026651.t1;Parent=MS.gene026651 |
| chr1.4 | exon | 15030989 | 15031101 | 15030989 | ID=MS.gene026651.t1.exon1;Parent=MS.gene026651.t1 |
| chr1.4 | CDS | 15030989 | 15031101 | 15030989 | ID=cds.MS.gene026651.t1;Parent=MS.gene026651.t1 |
| chr1.4 | exon | 15031184 | 15031341 | 15031184 | ID=MS.gene026651.t1.exon2;Parent=MS.gene026651.t1 |
| chr1.4 | CDS | 15031184 | 15031341 | 15031184 | ID=cds.MS.gene026651.t1;Parent=MS.gene026651.t1 |
| chr1.4 | exon | 15033669 | 15033784 | 15033669 | ID=MS.gene026651.t1.exon3;Parent=MS.gene026651.t1 |
| chr1.4 | CDS | 15033669 | 15033784 | 15033669 | ID=cds.MS.gene026651.t1;Parent=MS.gene026651.t1 |
| chr1.4 | exon | 15034042 | 15034647 | 15034042 | ID=MS.gene026651.t1.exon4;Parent=MS.gene026651.t1 |
| chr1.4 | CDS | 15034042 | 15034647 | 15034042 | ID=cds.MS.gene026651.t1;Parent=MS.gene026651.t1 |
| Gene Sequence |
| Protein sequence |
