AlfalfaGEDB | MS.gene95889

M. sativa cultivar XinJiangDaYe / MS.gene95889

KEGG: K14753
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF00400.35 PF20426.1

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene95889.t1	XP_003631071.1	100	325	0	0	1	325	1	325	8.40E-146	526.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene95889.t1	O24076	99.4	325	2	0	1	325	1	325	1.1e-146	520.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene95889.t1	G7LD98	100.0	325	0	0	1	325	1	325	6.1e-146	526.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049306	MS.gene95889	0.932744	5.38E-95	-1.69E-46
MS.gene049376	MS.gene95889	0.84318	1.64E-58	-1.69E-46
MS.gene051793	MS.gene95889	0.803477	3.42E-49	-1.69E-46
MS.gene051828	MS.gene95889	0.810346	1.21E-50	-1.69E-46
MS.gene051925	MS.gene95889	0.915159	8.19E-85	-1.69E-46
MS.gene051927	MS.gene95889	0.913886	3.66E-84	-1.69E-46
MS.gene052666	MS.gene95889	0.822851	1.90E-53	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene95889	MS.gene031873	PPI
MS.gene020921	MS.gene95889	PPI
MS.gene53517	MS.gene95889	PPI
MS.gene95889	MS.gene98726	PPI
MS.gene020923	MS.gene95889	PPI
MS.gene06897	MS.gene95889	PPI
MS.gene95889	MS.gene065462	PPI
MS.gene95889	MS.gene43369	PPI
MS.gene95889	MS.gene72768	PPI
MS.gene95889	MS.gene070323	PPI
MS.gene95889	MS.gene50236	PPI
MS.gene056386	MS.gene95889	PPI
MS.gene95889	MS.gene028609	PPI
MS.gene71525	MS.gene95889	PPI
MS.gene03199	MS.gene95889	PPI
MS.gene028182	MS.gene95889	PPI
MS.gene91058	MS.gene95889	PPI
MS.gene95889	MS.gene93783	PPI
MS.gene95889	MS.gene00863	PPI
MS.gene95889	MS.gene32044	PPI
MS.gene67365	MS.gene95889	PPI
MS.gene021058	MS.gene95889	PPI
MS.gene044379	MS.gene95889	PPI
MS.gene95889	MS.gene004666	PPI
MS.gene91976	MS.gene95889	PPI
MS.gene95889	MS.gene057157	PPI
MS.gene28335	MS.gene95889	PPI
MS.gene95889	MS.gene08349	PPI
MS.gene95889	MS.gene55382	PPI
MS.gene004091	MS.gene95889	PPI
MS.gene95889	MS.gene99693	PPI
MS.gene89750	MS.gene95889	PPI
MS.gene93179	MS.gene95889	PPI
MS.gene06688	MS.gene95889	PPI
MS.gene95889	MS.gene45470	PPI
MS.gene39977	MS.gene95889	PPI
MS.gene46881	MS.gene95889	PPI
MS.gene95889	MS.gene82426	PPI
MS.gene95889	MS.gene83444	PPI
MS.gene72163	MS.gene95889	PPI
MS.gene95889	MS.gene38095	PPI
MS.gene95889	MS.gene46262	PPI
MS.gene59369	MS.gene95889	PPI
MS.gene011390	MS.gene95889	PPI
MS.gene000365	MS.gene95889	PPI
MS.gene95889	MS.gene065463	PPI
MS.gene95889	MS.gene026651	PPI
MS.gene95889	MS.gene039947	PPI
MS.gene95889	MS.gene030418	PPI
MS.gene95889	MS.gene61130	PPI
MS.gene032493	MS.gene95889	PPI
MS.gene95889	MS.gene38174	PPI
MS.gene036217	MS.gene95889	PPI
MS.gene035327	MS.gene95889	PPI
MS.gene032177	MS.gene95889	PPI
MS.gene95889	MS.gene003877	PPI
MS.gene95889	MS.gene061428	PPI
MS.gene41343	MS.gene95889	PPI
MS.gene85276	MS.gene95889	PPI
MS.gene95889	MS.gene30933	PPI
MS.gene95889	MS.gene70420	PPI
MS.gene91977	MS.gene95889	PPI
MS.gene033349	MS.gene95889	PPI
MS.gene95889	MS.gene35887	PPI
MS.gene033348	MS.gene95889	PPI
MS.gene95889	MS.gene053443	PPI
MS.gene041982	MS.gene95889	PPI
MS.gene95889	MS.gene77471	PPI
MS.gene91973	MS.gene95889	PPI
MS.gene95889	MS.gene007953	PPI
MS.gene020922	MS.gene95889	PPI
MS.gene62620	MS.gene95889	PPI
MS.gene013784	MS.gene95889	PPI
MS.gene01864	MS.gene95889	PPI
MS.gene95889	MS.gene31177	PPI
MS.gene041553	MS.gene95889	PPI
MS.gene95889	MS.gene050322	PPI
MS.gene53708	MS.gene95889	PPI
MS.gene95889	MS.gene047943	PPI
MS.gene95889	MS.gene055528	PPI
MS.gene95889	MS.gene38172	PPI
MS.gene95889	MS.gene41661	PPI
MS.gene95889	MS.gene040957	PPI
MS.gene028153	MS.gene95889	PPI
MS.gene057124	MS.gene95889	PPI
MS.gene95889	MS.gene073888	PPI
MS.gene95889	MS.gene020923	PPI
MS.gene036493	MS.gene95889	PPI
MS.gene95889	MS.gene02570	PPI
MS.gene95889	MS.gene38094	PPI
MS.gene018865	MS.gene95889	PPI
MS.gene95889	MS.gene048789	PPI
MS.gene95889	MS.gene052011	PPI
MS.gene95889	MS.gene007227	PPI
MS.gene023270	MS.gene95889	PPI
MS.gene33613	MS.gene95889	PPI
MS.gene95889	MS.gene53169	PPI
MS.gene38173	MS.gene95889	PPI
MS.gene95889	MS.gene020921	PPI
MS.gene95889	MS.gene38097	PPI
MS.gene95889	MS.gene002901	PPI
MS.gene040151	MS.gene95889	PPI
MS.gene013571	MS.gene95889	PPI
MS.gene99897	MS.gene95889	PPI
MS.gene95889	MS.gene009772	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene95889.t1	MTR_8g106790	100.000	325	0	0	1	325	1	325	0.0	659
MS.gene95889.t1	MTR_4g119620	28.571	280	177	10	7	272	19	289	1.94e-26	107
MS.gene95889.t1	MTR_4g119620	23.929	280	142	10	96	322	18	279	1.00e-14	74.3
MS.gene95889.t1	MTR_1g072140	32.857	210	132	5	56	261	20	224	7.50e-25	102
MS.gene95889.t1	MTR_1g072140	28.413	271	174	8	10	272	22	280	8.82e-25	102
MS.gene95889.t1	MTR_1g072140	31.977	172	105	6	11	178	149	312	1.17e-11	65.1
MS.gene95889.t1	MTR_2g012630	28.063	253	170	5	13	263	13	255	1.69e-23	101
MS.gene95889.t1	MTR_2g012630	28.750	240	147	6	79	316	32	249	1.77e-22	98.6
MS.gene95889.t1	MTR_2g012630	28.063	253	170	5	13	263	13	255	2.21e-23	101
MS.gene95889.t1	MTR_2g012630	28.750	240	147	6	79	316	32	249	2.44e-22	98.2
MS.gene95889.t1	MTR_6g004040	28.740	254	167	7	13	263	14	256	4.62e-22	97.4
MS.gene95889.t1	MTR_6g004040	27.083	240	151	7	79	316	33	250	3.15e-18	85.9
MS.gene95889.t1	MTR_4g104380	26.623	308	177	9	27	320	241	513	7.24e-22	96.3
MS.gene95889.t1	MTR_4g104380	25.271	277	175	8	56	324	223	475	2.15e-16	80.1
MS.gene95889.t1	MTR_4g104380	27.027	222	140	7	7	220	306	513	1.17e-13	72.0
MS.gene95889.t1	MTR_1g054300	25.348	359	191	12	10	322	114	441	3.39e-20	91.3
MS.gene95889.t1	MTR_1g054300	31.020	245	121	7	13	220	248	481	7.35e-17	81.3
MS.gene95889.t1	MTR_3g075400	28.173	323	184	11	11	320	221	508	3.65e-20	91.3
MS.gene95889.t1	MTR_3g075400	26.354	277	172	9	56	324	218	470	1.82e-16	80.5
MS.gene95889.t1	MTR_3g075400	28.837	215	139	7	10	220	304	508	1.12e-12	68.9
MS.gene95889.t1	MTR_3g106080	30.189	212	142	4	59	268	415	622	1.89e-19	89.4
MS.gene95889.t1	MTR_3g106080	30.088	226	130	8	101	322	415	616	9.16e-16	78.6
MS.gene95889.t1	MTR_3g106080	37.383	107	62	1	27	133	514	615	1.69e-12	68.6
MS.gene95889.t1	MTR_4g095058	30.631	222	139	6	29	243	341	554	1.33e-18	86.7
MS.gene95889.t1	MTR_4g095058	25.094	267	151	10	74	322	298	533	4.22e-11	64.3
MS.gene95889.t1	MTR_4g011950	30.928	194	121	6	31	220	72	256	1.41e-18	87.0
MS.gene95889.t1	MTR_4g011950	25.455	275	169	9	56	320	8	256	8.14e-16	79.0
MS.gene95889.t1	MTR_4g011950	29.508	183	115	7	11	189	95	267	8.63e-12	66.6
MS.gene95889.t1	MTR_4g095058	30.631	222	139	6	29	243	343	556	1.42e-18	86.7
MS.gene95889.t1	MTR_4g095058	25.094	267	151	10	74	322	300	535	4.54e-11	63.9
MS.gene95889.t1	MTR_7g086360	29.348	276	164	13	55	320	47	301	2.09e-18	85.1
MS.gene95889.t1	MTR_7g086360	31.795	195	121	6	30	222	69	253	3.27e-18	84.3
MS.gene95889.t1	MTR_2g102277	30.412	194	122	6	31	220	72	256	3.55e-18	85.9
MS.gene95889.t1	MTR_2g102277	25.091	275	170	9	56	320	8	256	3.72e-15	76.6
MS.gene95889.t1	MTR_2g102277	30.412	194	122	6	31	220	72	256	4.18e-18	85.5
MS.gene95889.t1	MTR_2g102277	25.091	275	170	9	56	320	8	256	4.07e-15	76.6
MS.gene95889.t1	MTR_5g022690	31.963	219	137	6	3	220	268	475	5.00e-18	84.7
MS.gene95889.t1	MTR_5g022690	30.804	224	125	7	57	262	181	392	4.70e-16	79.0
MS.gene95889.t1	MTR_5g022690	28.655	171	115	4	93	260	267	433	8.71e-14	72.0
MS.gene95889.t1	MTR_5g022690	23.396	265	183	8	10	260	217	475	2.19e-11	65.1
MS.gene95889.t1	MTR_5g016350	29.098	244	157	7	7	243	327	561	6.18e-18	84.7
MS.gene95889.t1	MTR_5g016350	27.350	234	146	7	51	269	323	547	5.19e-15	76.3
MS.gene95889.t1	MTR_5g016350	29.098	244	157	7	7	243	263	497	6.22e-18	84.7
MS.gene95889.t1	MTR_5g016350	27.350	234	146	7	51	269	259	483	4.18e-15	76.3
MS.gene95889.t1	MTR_4g105700	29.319	191	124	4	59	241	56	243	7.79e-17	81.6
MS.gene95889.t1	MTR_4g105700	26.383	235	151	8	11	232	398	623	1.30e-14	75.1
MS.gene95889.t1	MTR_4g105700	28.169	213	142	4	14	220	446	653	3.19e-12	67.8
MS.gene95889.t1	MTR_4g105700	27.727	220	131	8	114	325	28	227	5.71e-11	63.9
MS.gene95889.t1	MTR_5g016370	29.730	222	141	6	29	243	360	573	1.39e-16	80.9
MS.gene95889.t1	MTR_5g016370	25.591	254	167	8	30	272	320	562	1.27e-14	75.1
MS.gene95889.t1	MTR_2g029940	26.609	233	147	4	59	272	145	372	2.09e-16	80.1
MS.gene95889.t1	MTR_3g052220	32.298	161	96	4	71	222	222	378	5.56e-16	79.0
MS.gene95889.t1	MTR_2g436510	24.749	299	189	9	31	320	185	456	1.05e-15	77.8
MS.gene95889.t1	MTR_2g436510	24.336	226	166	3	57	281	164	385	1.44e-15	77.4
MS.gene95889.t1	MTR_4g069090	28.626	262	161	11	7	260	10	253	3.08e-15	77.0
MS.gene95889.t1	MTR_2g102267	26.339	224	153	7	56	272	10	228	4.76e-15	75.1
MS.gene95889.t1	MTR_2g102267	29.167	216	133	8	11	219	97	299	4.95e-15	75.1
MS.gene95889.t1	MTR_2g102267	26.214	206	143	4	31	234	74	272	2.42e-14	72.8
MS.gene95889.t1	MTR_8g038550	29.119	261	156	9	69	324	189	425	5.31e-15	76.3
MS.gene95889.t1	MTR_3g116500	24.405	336	213	12	10	325	60	374	9.25e-15	74.7
MS.gene95889.t1	MTR_3g045130	31.892	185	115	5	6	189	347	521	1.24e-14	74.7
MS.gene95889.t1	MTR_3g045130	26.000	250	127	9	57	260	273	510	6.53e-13	69.7
MS.gene95889.t1	MTR_4g071130	29.825	171	114	3	58	227	4	169	1.35e-14	75.1
MS.gene95889.t1	MTR_4g071130	25.101	247	148	7	58	272	46	287	3.03e-13	71.2
MS.gene95889.t1	MTR_1g090827	31.875	160	103	3	79	237	25	179	1.70e-14	74.7
MS.gene95889.t1	MTR_1g090827	26.943	193	106	5	59	221	89	276	3.96e-12	67.8
MS.gene95889.t1	MTR_1g044720	25.188	266	173	9	12	262	167	421	3.04e-14	73.6
MS.gene95889.t1	MTR_1g097140	22.333	300	180	7	16	272	82	371	3.58e-14	73.2
MS.gene95889.t1	MTR_1g097140	27.168	173	118	4	59	229	76	242	2.05e-11	64.7
MS.gene95889.t1	MTR_2g016690	24.601	313	183	15	28	320	20	299	1.17e-13	71.2
MS.gene95889.t1	MTR_2g016690	26.697	221	147	6	14	226	92	305	2.57e-11	63.9
MS.gene95889.t1	MTR_8g092620	23.127	307	187	8	27	320	27	297	1.44e-13	70.5
MS.gene95889.t1	MTR_1g021590	25.166	302	171	11	29	320	120	376	2.13e-13	70.9
MS.gene95889.t1	MTR_7g076230	25.379	264	173	6	61	311	367	619	2.77e-13	71.2
MS.gene95889.t1	MTR_1g011610	25.506	247	161	11	30	267	636	868	3.38e-13	70.9
MS.gene95889.t1	MTR_1g011610	25.506	247	161	11	30	267	627	859	3.40e-13	70.9
MS.gene95889.t1	MTR_1g050340	24.790	238	160	10	30	262	523	746	5.08e-13	70.1
MS.gene95889.t1	MTR_1g050340	24.257	202	147	5	71	271	517	713	4.84e-12	67.4
MS.gene95889.t1	MTR_1g050340	24.790	238	160	10	30	262	524	747	5.18e-13	70.1
MS.gene95889.t1	MTR_1g050340	24.257	202	147	5	71	271	518	714	4.67e-12	67.4
MS.gene95889.t1	MTR_3g107910	26.190	252	151	12	30	268	635	864	6.49e-13	70.1
MS.gene95889.t1	MTR_4g102520	23.022	278	183	12	54	320	282	539	7.37e-13	69.7
MS.gene95889.t1	MTR_3g107910	26.190	252	151	12	30	268	642	871	7.39e-13	69.7
MS.gene95889.t1	MTR_4g125710	31.973	147	95	3	60	205	155	297	2.25e-12	67.0
MS.gene95889.t1	MTR_4g125710	28.804	184	121	5	146	324	11	189	2.59e-12	67.0
MS.gene95889.t1	MTR_4g125710	25.385	260	157	7	79	322	34	272	4.49e-11	63.2
MS.gene95889.t1	MTR_1g072740	23.273	275	180	12	54	317	281	535	2.49e-12	67.8
MS.gene95889.t1	MTR_8g092620	24.710	259	164	7	27	272	34	274	2.61e-12	67.0
MS.gene95889.t1	MTR_4g123597	28.829	222	143	6	11	224	483	697	6.78e-12	67.0
MS.gene95889.t1	MTR_4g113080	26.423	246	159	11	30	268	518	748	1.30e-11	65.9
MS.gene95889.t1	MTR_0421s0030	32.639	144	67	3	79	220	104	219	1.35e-11	63.5
MS.gene95889.t1	MTR_8g092620	26.396	197	132	4	27	221	27	212	1.61e-11	63.5
MS.gene95889.t1	MTR_7g099170	28.378	222	121	12	11	221	149	343	3.27e-11	64.3
MS.gene95889.t1	MTR_3g116500	24.727	275	172	10	71	325	5	264	3.59e-11	63.2
MS.gene95889.t1	MTR_7g099170	28.378	222	121	12	11	221	177	371	4.32e-11	63.9
MS.gene95889.t1	MTR_1g081830	27.626	257	170	8	26	273	22	271	5.24e-11	63.9
MS.gene95889.t1	MTR_1g081830	27.626	257	170	8	26	273	50	299	5.51e-11	63.9
MS.gene95889.t1	MTR_2g034500	26.230	183	123	5	147	321	239	417	5.66e-11	64.3
MS.gene95889.t1	MTR_1g089260	27.374	179	122	6	59	233	81	255	7.65e-11	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene95889.t1	AT3G18130	86.503	326	43	1	1	325	1	326	0.0	583
MS.gene95889.t1	AT1G18080	86.239	327	43	2	1	325	1	327	0.0	580
MS.gene95889.t1	AT1G48630	85.583	326	46	1	1	325	1	326	0.0	576
MS.gene95889.t1	AT3G49660	30.466	279	165	7	54	323	15	273	5.87e-32	121
MS.gene95889.t1	AT3G49660	27.273	319	199	9	10	320	19	312	4.25e-28	111
MS.gene95889.t1	AT4G02730	29.151	271	167	7	57	322	37	287	4.62e-24	100
MS.gene95889.t1	AT4G02730	29.044	272	172	9	10	272	38	297	8.57e-23	97.4
MS.gene95889.t1	AT4G02730	30.698	215	135	8	11	220	124	329	4.23e-14	72.4
MS.gene95889.t1	AT1G11160	29.218	243	148	6	76	316	29	249	3.54e-22	97.8
MS.gene95889.t1	AT1G11160	26.908	249	172	4	13	260	13	252	7.91e-21	94.0
MS.gene95889.t1	AT1G11160	28.685	251	161	10	14	260	57	293	2.91e-18	86.3
MS.gene95889.t1	AT1G11160	29.218	243	148	6	76	316	29	249	4.20e-22	97.8
MS.gene95889.t1	AT1G11160	26.908	249	172	4	13	260	13	252	9.04e-21	93.6
MS.gene95889.t1	AT1G11160	28.685	251	161	10	14	260	57	293	3.11e-18	86.3
MS.gene95889.t1	AT1G11160	29.218	243	148	6	76	316	29	249	4.39e-22	97.4
MS.gene95889.t1	AT1G11160	26.908	249	172	4	13	260	13	252	8.44e-21	94.0
MS.gene95889.t1	AT1G11160	28.685	251	161	10	14	260	57	293	3.22e-18	86.3
MS.gene95889.t1	AT5G08390	27.273	253	172	5	13	263	14	256	7.61e-21	94.0
MS.gene95889.t1	AT5G08390	27.500	240	150	8	79	316	33	250	1.29e-17	84.3
MS.gene95889.t1	AT5G25150	29.482	251	152	6	37	266	373	619	1.21e-20	93.2
MS.gene95889.t1	AT5G25150	26.071	280	155	10	71	322	360	615	5.82e-18	85.1
MS.gene95889.t1	AT5G25150	29.108	213	138	6	17	228	421	621	7.02e-15	75.9
MS.gene95889.t1	AT5G25150	30.216	139	91	2	27	164	513	646	1.43e-11	65.9
MS.gene95889.t1	AT5G25150	29.719	249	150	6	37	264	373	617	1.29e-20	93.2
MS.gene95889.t1	AT5G25150	26.071	280	155	10	71	322	360	615	6.00e-18	85.1
MS.gene95889.t1	AT5G25150	29.108	213	138	6	17	228	421	621	8.15e-15	75.5
MS.gene95889.t1	AT5G25150	30.216	139	91	2	27	164	513	646	1.42e-11	65.9
MS.gene95889.t1	AT5G23430	26.877	253	173	5	13	263	14	256	2.53e-20	92.4
MS.gene95889.t1	AT5G23430	26.667	240	152	8	79	316	33	250	1.18e-16	81.3
MS.gene95889.t1	AT5G23430	26.877	253	173	5	13	263	14	256	2.67e-20	92.0
MS.gene95889.t1	AT5G23430	26.667	240	152	8	79	316	33	250	1.25e-16	81.3
MS.gene95889.t1	AT5G23430	26.877	253	173	5	13	263	14	256	2.67e-20	92.0
MS.gene95889.t1	AT5G23430	26.667	240	152	8	79	316	33	250	1.25e-16	81.3
MS.gene95889.t1	AT1G61210	27.309	249	171	4	13	260	13	252	4.58e-20	91.7
MS.gene95889.t1	AT1G61210	28.333	240	148	6	79	316	32	249	1.75e-19	89.7
MS.gene95889.t1	AT1G61210	27.165	254	161	11	14	260	57	293	3.17e-16	80.1
MS.gene95889.t1	AT3G18860	31.923	260	156	10	7	260	12	256	7.99e-20	90.9
MS.gene95889.t1	AT3G18860	31.923	260	156	10	7	260	12	256	7.99e-20	90.9
MS.gene95889.t1	AT5G52820	35.065	154	92	3	26	179	327	472	8.64e-20	90.1
MS.gene95889.t1	AT5G52820	26.136	352	193	11	10	320	146	471	1.42e-18	86.7
MS.gene95889.t1	AT5G52820	23.249	357	201	10	10	322	104	431	8.55e-17	81.3
MS.gene95889.t1	AT1G61210	27.309	249	171	4	13	260	13	252	9.59e-20	90.5
MS.gene95889.t1	AT1G61210	28.333	240	148	6	79	316	32	249	2.79e-19	89.4
MS.gene95889.t1	AT1G61210	27.165	254	161	11	14	260	57	293	6.18e-16	79.3
MS.gene95889.t1	AT1G61210	27.309	249	171	4	13	260	13	252	1.14e-19	90.5
MS.gene95889.t1	AT1G61210	28.333	240	148	6	79	316	32	249	3.21e-19	89.0
MS.gene95889.t1	AT1G61210	27.165	254	161	11	14	260	57	293	6.83e-16	79.0
MS.gene95889.t1	AT1G11160	28.571	203	140	3	59	260	12	210	4.45e-19	88.6
MS.gene95889.t1	AT1G11160	29.630	216	128	6	103	316	14	207	1.60e-18	87.0
MS.gene95889.t1	AT1G11160	28.685	251	161	10	14	260	15	251	3.36e-18	85.9
MS.gene95889.t1	AT1G52360	30.928	194	121	6	31	220	116	300	7.68e-19	87.8
MS.gene95889.t1	AT1G52360	25.180	278	176	8	56	325	52	305	7.25e-16	79.0
MS.gene95889.t1	AT1G52360	30.928	194	121	6	31	220	72	256	7.70e-19	87.8
MS.gene95889.t1	AT1G52360	25.180	278	176	8	56	325	8	261	5.52e-16	79.3
MS.gene95889.t1	AT1G52360	30.928	194	121	6	31	220	72	256	7.71e-19	87.8
MS.gene95889.t1	AT1G52360	25.180	278	176	8	56	325	8	261	5.84e-16	79.3
MS.gene95889.t1	AT1G52360	30.928	194	121	6	31	220	72	256	7.71e-19	87.8
MS.gene95889.t1	AT1G52360	25.180	278	176	8	56	325	8	261	5.84e-16	79.3
MS.gene95889.t1	AT3G15980	30.000	210	134	6	15	220	56	256	9.34e-19	87.8
MS.gene95889.t1	AT3G15980	24.820	278	177	8	56	325	8	261	1.94e-15	77.8
MS.gene95889.t1	AT3G15980	30.000	210	134	6	15	220	56	256	9.34e-19	87.8
MS.gene95889.t1	AT3G15980	24.820	278	177	8	56	325	8	261	1.94e-15	77.8
MS.gene95889.t1	AT3G15980	30.000	210	134	6	15	220	56	256	9.34e-19	87.8
MS.gene95889.t1	AT3G15980	24.820	278	177	8	56	325	8	261	1.94e-15	77.8
MS.gene95889.t1	AT3G15980	30.000	210	134	6	15	220	56	256	9.34e-19	87.8
MS.gene95889.t1	AT3G15980	24.820	278	177	8	56	325	8	261	1.94e-15	77.8
MS.gene95889.t1	AT3G15980	30.000	210	134	6	15	220	56	256	9.47e-19	87.8
MS.gene95889.t1	AT3G15980	24.820	278	177	8	56	325	8	261	2.10e-15	77.4
MS.gene95889.t1	AT3G15980	30.000	210	134	6	15	220	56	256	9.75e-19	87.4
MS.gene95889.t1	AT3G15980	24.820	278	177	8	56	325	8	261	1.70e-15	77.8
MS.gene95889.t1	AT3G15980	30.000	210	134	6	15	220	56	256	1.01e-18	87.4
MS.gene95889.t1	AT3G15980	24.820	278	177	8	56	325	8	261	1.83e-15	77.8
MS.gene95889.t1	AT5G50230	27.036	307	177	9	27	320	236	508	1.09e-18	87.0
MS.gene95889.t1	AT5G50230	28.061	196	116	5	53	228	196	386	1.54e-15	77.4
MS.gene95889.t1	AT5G50230	29.817	218	139	7	7	220	301	508	8.07e-14	72.4
MS.gene95889.t1	AT1G79990	30.412	194	122	6	31	220	72	256	4.38e-18	85.5
MS.gene95889.t1	AT1G79990	25.088	283	187	7	56	324	8	279	2.53e-15	77.4
MS.gene95889.t1	AT1G79990	28.571	182	118	6	11	189	95	267	2.94e-11	65.1
MS.gene95889.t1	AT1G79990	30.412	194	122	6	31	220	72	256	4.77e-18	85.5
MS.gene95889.t1	AT1G79990	25.088	283	187	7	56	324	8	279	2.93e-15	77.0
MS.gene95889.t1	AT1G79990	28.571	182	118	6	11	189	95	267	2.87e-11	65.1
MS.gene95889.t1	AT2G41500	30.698	215	138	5	7	220	331	535	6.65e-18	84.7
MS.gene95889.t1	AT2G41500	30.698	215	138	5	7	220	331	535	6.65e-18	84.7
MS.gene95889.t1	AT2G32700	25.820	244	161	11	30	267	522	751	1.02e-17	84.3
MS.gene95889.t1	AT2G32700	25.820	244	161	11	30	267	524	753	1.05e-17	84.3
MS.gene95889.t1	AT2G32700	25.820	244	161	11	30	267	524	753	1.05e-17	84.3
MS.gene95889.t1	AT2G32700	25.820	244	161	11	30	267	524	753	1.05e-17	84.3
MS.gene95889.t1	AT2G32700	25.820	244	161	11	30	267	524	753	1.05e-17	84.3
MS.gene95889.t1	AT2G32700	25.820	244	161	11	30	267	524	753	1.05e-17	84.3
MS.gene95889.t1	AT2G32700	25.820	244	161	11	30	267	543	772	1.12e-17	84.3
MS.gene95889.t1	AT5G67320	28.390	236	152	6	29	255	378	605	1.58e-17	83.6
MS.gene95889.t1	AT5G67320	26.693	251	162	8	30	269	338	577	6.87e-13	69.7
MS.gene95889.t1	AT5G13480	27.376	263	164	7	66	324	137	376	2.11e-17	83.6
MS.gene95889.t1	AT5G13480	27.376	263	164	7	66	324	114	353	2.31e-17	83.2
MS.gene95889.t1	AT5G13480	27.376	263	164	7	66	324	126	365	2.34e-17	83.2
MS.gene95889.t1	AT5G13480	27.376	263	164	7	66	324	114	353	2.70e-17	83.2
MS.gene95889.t1	AT2G43770	26.545	275	175	11	54	320	44	299	4.71e-17	81.3
MS.gene95889.t1	AT2G43770	28.761	226	136	7	103	325	51	254	9.85e-15	74.3
MS.gene95889.t1	AT1G73720	33.750	160	92	4	71	221	221	375	6.72e-17	81.6
MS.gene95889.t1	AT4G34460	25.948	343	214	14	2	325	52	373	1.38e-16	80.1
MS.gene95889.t1	AT2G33340	30.000	190	121	5	80	262	239	423	1.39e-16	80.9
MS.gene95889.t1	AT2G33340	26.557	305	191	12	25	322	231	509	7.26e-13	69.7
MS.gene95889.t1	AT2G33340	30.000	190	121	5	80	262	239	423	1.39e-16	80.9
MS.gene95889.t1	AT2G33340	26.557	305	191	12	25	322	231	509	7.26e-13	69.7
MS.gene95889.t1	AT2G33340	30.000	190	121	5	80	262	239	423	1.78e-16	80.5
MS.gene95889.t1	AT2G33340	27.823	248	156	10	25	264	231	463	2.14e-12	68.2
MS.gene95889.t1	AT4G34460	26.239	343	213	14	2	325	47	368	1.95e-16	79.7
MS.gene95889.t1	AT5G16750	29.333	225	137	8	11	222	397	612	4.04e-16	79.7
MS.gene95889.t1	AT5G16750	29.050	179	119	3	49	222	46	221	2.48e-14	74.3
MS.gene95889.t1	AT5G16750	26.606	218	149	5	9	220	440	652	3.62e-12	67.8
MS.gene95889.t1	AT4G05410	23.906	297	184	9	59	322	157	444	6.34e-16	78.6
MS.gene95889.t1	AT4G32551	27.459	244	153	9	10	250	646	868	6.59e-16	79.0
MS.gene95889.t1	AT4G32551	27.459	244	153	9	10	250	684	906	7.52e-16	79.0
MS.gene95889.t1	AT1G15440	25.784	287	147	6	61	283	347	631	7.79e-16	79.0
MS.gene95889.t1	AT1G15440	29.310	174	82	4	10	143	386	558	6.62e-11	63.9
MS.gene95889.t1	AT1G15440	25.784	287	147	6	61	283	387	671	7.91e-16	79.0
MS.gene95889.t1	AT1G15440	29.310	174	82	4	10	143	426	598	6.90e-11	63.9
MS.gene95889.t1	AT2G05720	29.167	240	135	7	57	291	64	273	1.14e-15	76.3
MS.gene95889.t1	AT4G34460	25.079	315	199	12	29	325	16	311	4.54e-15	75.1
MS.gene95889.t1	AT1G71840	23.511	319	208	8	10	320	65	355	7.73e-15	75.1
MS.gene95889.t1	AT1G71840	22.266	256	186	6	11	261	109	356	2.16e-12	67.8
MS.gene95889.t1	AT1G49040	26.906	223	146	6	4	225	888	1094	1.25e-14	75.5
MS.gene95889.t1	AT3G49180	24.062	320	158	8	18	320	39	290	6.47e-14	72.4
MS.gene95889.t1	AT5G64730	24.068	295	187	9	32	320	34	297	9.64e-14	71.2
MS.gene95889.t1	AT2G21390	32.000	150	96	3	79	227	25	169	1.11e-13	72.4
MS.gene95889.t1	AT2G21390	24.696	247	149	7	58	272	46	287	6.12e-13	70.1
MS.gene95889.t1	AT4G15900	25.424	236	164	5	31	264	191	416	1.76e-13	71.2
MS.gene95889.t1	AT4G15900	24.336	226	166	4	57	281	170	391	1.89e-13	71.2
MS.gene95889.t1	AT3G18140	23.151	311	190	12	28	322	5	282	2.21e-13	70.1
MS.gene95889.t1	AT3G18140	26.667	225	150	7	10	228	73	288	6.66e-12	65.9
MS.gene95889.t1	AT2G22040	24.224	322	183	13	24	322	6	289	2.43e-13	70.1
MS.gene95889.t1	AT2G22040	27.602	221	144	7	13	226	82	293	1.15e-11	65.1
MS.gene95889.t1	AT3G16650	24.074	216	158	5	57	271	164	374	1.30e-12	68.6
MS.gene95889.t1	AT3G16650	23.478	230	155	5	11	240	166	374	5.26e-11	63.9
MS.gene95889.t1	AT5G08560	29.592	196	124	6	31	222	376	561	2.34e-12	68.2
MS.gene95889.t1	AT5G08560	29.592	196	124	6	31	222	376	561	2.34e-12	68.2
MS.gene95889.t1	AT5G08560	29.592	196	124	6	31	222	376	561	2.34e-12	68.2
MS.gene95889.t1	AT1G10580	23.022	278	185	11	54	320	270	529	2.50e-12	68.2
MS.gene95889.t1	AT1G15470	24.746	295	182	10	61	323	9	295	2.54e-12	67.0
MS.gene95889.t1	AT2G26490	25.424	295	179	11	29	320	107	363	2.83e-12	67.8
MS.gene95889.t1	AT3G21540	27.027	222	147	6	11	224	483	697	3.12e-12	67.8
MS.gene95889.t1	AT4G34460	27.615	239	154	9	2	228	52	283	3.55e-12	67.0
MS.gene95889.t1	AT4G29830	29.891	184	119	6	146	324	11	189	4.70e-12	66.2
MS.gene95889.t1	AT2G47410	23.858	197	140	4	133	324	220	411	1.29e-11	66.2
MS.gene95889.t1	AT2G47410	23.858	197	140	4	133	324	219	410	1.36e-11	66.2
MS.gene95889.t1	AT2G47410	23.858	197	140	4	133	324	38	229	1.64e-11	65.9
MS.gene95889.t1	AT4G21130	25.517	290	181	9	57	322	139	417	1.92e-11	65.1
MS.gene95889.t1	AT1G47610	25.902	305	167	15	28	320	34	291	2.00e-11	64.7
MS.gene95889.t1	AT1G04510	25.943	212	145	5	25	232	231	434	2.21e-11	65.1
MS.gene95889.t1	AT1G04510	25.943	212	145	5	25	232	231	434	2.34e-11	65.1
MS.gene95889.t1	AT1G62020	22.761	268	172	5	26	265	61	321	4.08e-11	64.7
MS.gene95889.t1	AT3G50390	23.765	324	194	14	6	320	89	368	6.10e-11	63.5

Find 100 sgRNAs with CRISPR-Local

Find 149 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGTTTGCTCTGTCTGGTTCA+TGG	0.276414	4.3:-624787	MS.gene95889:CDS
AACACACTTGCTGGACATTC+TGG	0.280035	4.3:-624455	MS.gene95889:CDS
TAGCATTAAGATCTGGGATT+TGG	0.318277	4.3:-624249	MS.gene95889:CDS
GATGGTTCTCTCTGTGCTTC+TGG	0.321506	4.3:-624404	MS.gene95889:CDS
CTTTGTGTTTCAGTCCTAAC+AGG	0.327839	4.3:-624298	MS.gene95889:CDS
GGGACGGTGAGCTTCGTCTC+TGG	0.330822	4.3:-624766	MS.gene95889:CDS
GTTGTCCGAGTGTGGGGAAT+CGG	0.337248	4.3:-623040	MS.gene95889:CDS
CGGTCACTCTCATTTCGTTC+AGG	0.385287	4.3:-624834	MS.gene95889:CDS
GAAACACAAAGCATGAATAA+TGG	0.386516	4.3:+624310	None:intergenic
CTGAGTCTAGCATTAAGATC+TGG	0.386642	4.3:-624256	MS.gene95889:CDS
AAGTTGAGGAACACACTTGC+TGG	0.405307	4.3:-624464	MS.gene95889:CDS
GACGGGCAGTTTGCTCTGTC+TGG	0.407534	4.3:-624794	MS.gene95889:CDS
GGGACAGGACCGTTAAGGTT+TGG	0.416188	4.3:-624502	MS.gene95889:CDS
GACGGAAGCACCTTGTTTAG+TGG	0.423763	4.3:-623076	MS.gene95889:CDS
GCACAGAGCCAGTACCTGTT+AGG	0.423885	4.3:+624284	None:intergenic
GTTTGCTCTGTCTGGTTCAT+GGG	0.425609	4.3:-624786	MS.gene95889:CDS
TCATGTCGGAATTGTCGATT+GGG	0.431334	4.3:+624945	None:intergenic
AGCGACGGAGAGAACATCTT+TGG	0.432836	4.3:+624700	None:intergenic
CAGAATGAGCATCACCATCT+TGG	0.439644	4.3:+624588	None:intergenic
GAGCATTGTTGAGGATTTGA+AGG	0.440124	4.3:-624219	MS.gene95889:CDS
TCTACTGTACTAGTTTGAAC+TGG	0.441560	4.3:-623105	MS.gene95889:CDS
GGACGGTGAGCTTCGTCTCT+GGG	0.449531	4.3:-624765	MS.gene95889:CDS
TTGTCCGAGTGTGGGGAATC+GGG	0.449591	4.3:-623039	MS.gene95889:CDS
CATGACGCCGAGACAATTGT+TGG	0.458447	4.3:+624524	None:intergenic
GGTCAGATTCCAAACCTTAA+CGG	0.459258	4.3:+624493	None:intergenic
AGTGACCGGTGAGACGGCGG+CGG	0.459624	4.3:+624849	None:intergenic
ACTGAAGCTGATGCTGCTAT+TGG	0.462296	4.3:-624185	MS.gene95889:CDS
TGTGCTTCTGGTGGTAAAGA+TGG	0.471521	4.3:-624392	MS.gene95889:CDS
ATGGTGATGCTCATTCTGAT+TGG	0.473124	4.3:-624583	MS.gene95889:CDS
GTGACCGGTGAGACGGCGGC+GGG	0.483528	4.3:+624850	None:intergenic
GTTTCAGTCCTAACAGGTAC+TGG	0.484997	4.3:-624292	MS.gene95889:CDS
CAACAATTGTCTCGGCGTCA+TGG	0.486830	4.3:-624523	MS.gene95889:CDS
GACCGGTGAGACGGCGGCGG+GGG	0.491127	4.3:+624852	None:intergenic
AGACTTTACTCTCTTGATGC+TGG	0.493623	4.3:-624335	MS.gene95889:CDS
TTTGCTGTGGGATTTGGCTG+AGG	0.493974	4.3:-624363	MS.gene95889:CDS
AAATACCTTCTTCTTGGTGG+TGG	0.495380	4.3:+624154	None:intergenic
ATTGTTGGCTGAAGAGTGCT+GGG	0.496496	4.3:+624539	None:intergenic
ACCTCCGCTCGCCGATTCGT+TGG	0.496844	4.3:-624728	MS.gene95889:CDS
AATTGTTGGCTGAAGAGTGC+TGG	0.497629	4.3:+624538	None:intergenic
ACCGTAGGTCTTGTCCTCCT+TGG	0.497894	4.3:+624877	None:intergenic
TTGTCTCGGCGTCATGGGAC+AGG	0.500834	4.3:-624517	MS.gene95889:CDS
TGAGTCTAGCATTAAGATCT+GGG	0.503624	4.3:-624255	MS.gene95889:CDS
GTCATGGGACAGGACCGTTA+AGG	0.507144	4.3:-624507	MS.gene95889:CDS
ATCATGTCGGAATTGTCGAT+TGG	0.510552	4.3:+624944	None:intergenic
ATTAAGCTCTGGAACACTCT+TGG	0.515087	4.3:-624629	MS.gene95889:CDS
GGTAAGATGCCACAGGATGA+TGG	0.518543	4.3:+624898	None:intergenic
TGGTGATGCTCATTCTGATT+GGG	0.518912	4.3:-624582	MS.gene95889:CDS
GCTCTGTCTGGTTCATGGGA+CGG	0.524991	4.3:-624782	MS.gene95889:CDS
ACTGTTGCTGTTTCACCCGA+TGG	0.529873	4.3:-624422	MS.gene95889:CDS
CTTTGGTGTGACCAACGAAT+CGG	0.534791	4.3:+624717	None:intergenic
AACAATTGTCTCGGCGTCAT+GGG	0.536604	4.3:-624522	MS.gene95889:CDS
GAAGCTGATGCTGCTATTGG+TGG	0.548227	4.3:-624182	MS.gene95889:CDS
CTGAACGAAATGAGAGTGAC+CGG	0.549324	4.3:+624835	None:intergenic
GCTGAGGGTCTTGTTCTTCG+CGG	0.549872	4.3:-625010	MS.gene95889:CDS
AACGTCAGTGTGAGCACGCA+TGG	0.552670	4.3:+624985	None:intergenic
TTGCTGTGGGATTTGGCTGA+GGG	0.559480	4.3:-624362	MS.gene95889:CDS
CGTCTCTGGGATCTCAACGC+TGG	0.567725	4.3:-624752	MS.gene95889:CDS
CCGATGGTGTTGTCCGAGTG+TGG	0.571115	4.3:-623048	MS.gene95889:CDS
GGAGAGCAAGAGCATTGTTG+AGG	0.575435	4.3:-624228	MS.gene95889:CDS
CACGATCTGACGGTTATCGA+TGG	0.580117	4.3:+624673	None:intergenic
CAGGATGATGGATTTGTCAC+GGG	0.582341	4.3:+624910	None:intergenic
CCTCCTTGGTAAGATGCCAC+AGG	0.586741	4.3:+624891	None:intergenic
GTGACCGCACGATTAAGCTC+TGG	0.589019	4.3:-624640	MS.gene95889:CDS
ACAGGATGATGGATTTGTCA+CGG	0.595586	4.3:+624909	None:intergenic
AATGAGAGTGACCGGTGAGA+CGG	0.596162	4.3:+624843	None:intergenic
TTGTTTAGTGGATATACCGA+TGG	0.596638	4.3:-623064	MS.gene95889:CDS
CGATGGTGTTGTCCGAGTGT+GGG	0.597010	4.3:-623047	MS.gene95889:CDS
TGACCGGTGAGACGGCGGCG+GGG	0.597789	4.3:+624851	None:intergenic
AGAAGCACAGAGAGAACCAT+CGG	0.597878	4.3:+624406	None:intergenic
GAAACAACCAATCATGGCTG+AGG	0.602033	4.3:-625026	None:intergenic
TGATACCACCACCAAGAAGA+AGG	0.606329	4.3:-624159	MS.gene95889:intron
AACGCCCGATTCCCCACACT+CGG	0.606339	4.3:+623035	None:intergenic
GAGAAGCAGACACGATCTGA+CGG	0.607156	4.3:+624663	None:intergenic
TGTGTTCCTCAACTTACAGT+TGG	0.608156	4.3:+624472	None:intergenic
CCACACTCGGACAACACCAT+CGG	0.608790	4.3:+623048	None:intergenic
GAGAGTGACCGGTGAGACGG+CGG	0.609110	4.3:+624846	None:intergenic
ACCAACGAATCGGCGAGCGG+AGG	0.614626	4.3:+624727	None:intergenic
TGCAAGTACACTATCCAAGA+TGG	0.614819	4.3:-624602	MS.gene95889:CDS
AGTTTGAACTGGAGTGCAGA+CGG	0.615302	4.3:-623094	MS.gene95889:CDS
GATGTTGTTCTATCATCCGA+CGG	0.615490	4.3:-624812	MS.gene95889:CDS
ACCAAGGAGGACAAGACCTA+CGG	0.626321	4.3:-624878	MS.gene95889:CDS
ATGTTGTTCTATCATCCGAC+GGG	0.634241	4.3:-624811	MS.gene95889:CDS
TCTTCAGCCAACAATTGTCT+CGG	0.639547	4.3:-624531	MS.gene95889:CDS
GGTTCTCTCTGTGCTTCTGG+TGG	0.643194	4.3:-624401	MS.gene95889:CDS
GATGGTGTTGTCCGAGTGTG+GGG	0.650311	4.3:-623046	MS.gene95889:CDS
AAACAACCAATCATGGCTGA+GGG	0.652791	4.3:-625025	None:intergenic
GAAGCACAGAGAGAACCATC+GGG	0.653679	4.3:+624407	None:intergenic
ATCTGACCAACTGTAAGTTG+AGG	0.659011	4.3:-624478	MS.gene95889:CDS
CATCCTGTGGCATCTTACCA+AGG	0.661172	4.3:-624894	MS.gene95889:CDS
ATCGGTATATCCACTAAACA+AGG	0.661578	4.3:+623066	None:intergenic
GTGACCAACGAATCGGCGAG+CGG	0.666511	4.3:+624724	None:intergenic
CATGTCGGAATTGTCGATTG+GGG	0.675247	4.3:+624946	None:intergenic
GTGACAAATCCATCATCCTG+TGG	0.676655	4.3:-624907	MS.gene95889:CDS
GATGATGGATTTGTCACGGG+AGG	0.682833	4.3:+624913	None:intergenic
TGTTCCAGAGCTTAATCGTG+CGG	0.685669	4.3:+624636	None:intergenic
GTTATCGATGGAGAAAGCGA+CGG	0.687782	4.3:+624685	None:intergenic
GGAGGCAGTGACGATCATGT+CGG	0.692394	4.3:+624931	None:intergenic
AGACAGAGCAAACTGCCCGT+CGG	0.707115	4.3:+624796	None:intergenic
CCTGTGGCATCTTACCAAGG+AGG	0.735899	4.3:-624891	MS.gene95889:CDS
TTGTTGGCTGAAGAGTGCTG+GGG	0.759084	4.3:+624540	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GATAAACCTAAAAAATATTT+CGG	+	chr4.3:624723-624742	None:intergenic	15.0%
!!!	ACATGATTTGTTTATTATTT+GGG	-	chr4.3:624007-624026	MS.gene95889:intron	15.0%
!!!	TACATGATTTGTTTATTATT+TGG	-	chr4.3:624006-624025	MS.gene95889:intron	15.0%
!!	AAAAAAAAATACCTTCTTCT+TGG	+	chr4.3:623898-623917	None:intergenic	20.0%
!!	ACTTTCATTTGATTAATCAA+TGG	-	chr4.3:624579-624598	MS.gene95889:CDS	20.0%
!!	CAAACAAAAACATAAAACAA+GGG	+	chr4.3:624288-624307	None:intergenic	20.0%
!!	TCAAACAAAAACATAAAACA+AGG	+	chr4.3:624289-624308	None:intergenic	20.0%
!!	TCAAATGAAAGTAATTCAAA+TGG	+	chr4.3:624571-624590	None:intergenic	20.0%
!!!	ATGATTTGTTTATTATTTGG+GGG	-	chr4.3:624009-624028	MS.gene95889:intron	20.0%
!!!	CATGATTTGTTTATTATTTG+GGG	-	chr4.3:624008-624027	MS.gene95889:intron	20.0%
!!!	GTTAATCCGAAATATTTTTT+AGG	-	chr4.3:624714-624733	MS.gene95889:CDS	20.0%
!	AACAGTATTTCAACAACAAA+TGG	+	chr4.3:624491-624510	None:intergenic	25.0%
!	ATGAATGATAAATATCACCA+AGG	+	chr4.3:624747-624766	None:intergenic	25.0%
!	GCAAAAATATACCGAATTAA+TGG	+	chr4.3:624901-624920	None:intergenic	25.0%
!	TATTGATATGAATGCAACAA+TGG	+	chr4.3:624825-624844	None:intergenic	25.0%
!	TTGTTTGTTTGATTGACATA+AGG	-	chr4.3:624253-624272	MS.gene95889:CDS	25.0%
!!	AGCTGATTTCAAAAATGAAA+AGG	+	chr4.3:624611-624630	None:intergenic	25.0%
!!	GATATATTGTTGTTGTTGAT+TGG	-	chr4.3:623950-623969	MS.gene95889:intron	25.0%
!!	TTGATTGGTAGTTTAGAATT+AGG	-	chr4.3:623965-623984	MS.gene95889:intron	25.0%
!!	TTGGTGATATTTATCATTCA+TGG	-	chr4.3:624746-624765	MS.gene95889:CDS	25.0%
!!!	ATTTTTTAGGTTTATCTCCT+TGG	-	chr4.3:624727-624746	MS.gene95889:CDS	25.0%
	AAAAAATACCTTCTTCTTGG+TGG	+	chr4.3:623895-623914	None:intergenic	30.0%
	AAATGACATGAATGTAAGGA+AGG	+	chr4.3:624538-624557	None:intergenic	30.0%
	AATGAACAATTGCTGTGTAA+TGG	-	chr4.3:624217-624236	MS.gene95889:CDS	30.0%
	AGAGACTGTGTTTAACTAAT+TGG	-	chr4.3:624309-624328	MS.gene95889:CDS	30.0%
	ATCTAGTCCATTTACTTGAT+AGG	-	chr4.3:624796-624815	MS.gene95889:CDS	30.0%
	CAACAATATATCAACAGCAT+CGG	+	chr4.3:623942-623961	None:intergenic	30.0%
	CATAGCACATATTAATGTCA+GGG	+	chr4.3:624056-624075	None:intergenic	30.0%
	CTCAAAATGACATGAATGTA+AGG	+	chr4.3:624542-624561	None:intergenic	30.0%
	GAAACACAAAGCATGAATAA+TGG	+	chr4.3:623736-623755	None:intergenic	30.0%
	GTAGATAACCTGAAATACAA+CGG	+	chr4.3:624923-624942	None:intergenic	30.0%
	TCAAAGTTCAGTATTAACTG+AGG	+	chr4.3:624468-624487	None:intergenic	30.0%
	TCATAGCACATATTAATGTC+AGG	+	chr4.3:624057-624076	None:intergenic	30.0%
	TTGCAACTCAACCATTAATT+CGG	-	chr4.3:624887-624906	MS.gene95889:CDS	30.0%
!!	TATCAAGTAAATGGACTAGA+TGG	+	chr4.3:624797-624816	None:intergenic	30.0%
!!	TATTTTTGCCGTTGTATTTC+AGG	-	chr4.3:624912-624931	MS.gene95889:CDS	30.0%
	ATCGGTATATCCACTAAACA+AGG	+	chr4.3:624980-624999	None:intergenic	35.0%
	CAGAAAATGACATGAATGCA+AGG	+	chr4.3:624692-624711	None:intergenic	35.0%
	TACTTGTCAGTTAAACCAAC+AGG	+	chr4.3:624347-624366	None:intergenic	35.0%
	TGAGTCTAGCATTAAGATCT+GGG	-	chr4.3:623788-623807	MS.gene95889:intron	35.0%
	TGATATGAATGCAACAATGG+TGG	+	chr4.3:624822-624841	None:intergenic	35.0%
!	ATTAATGTCAGGGAGCATAA+GGG	+	chr4.3:624046-624065	None:intergenic	35.0%
!	TAGCATTAAGATCTGGGATT+TGG	-	chr4.3:623794-623813	MS.gene95889:intron	35.0%
!	TATTAATGTCAGGGAGCATA+AGG	+	chr4.3:624047-624066	None:intergenic	35.0%
!	TCTACTGTACTAGTTTGAAC+TGG	-	chr4.3:624938-624957	MS.gene95889:CDS	35.0%
!	TTGTTTAGTGGATATACCGA+TGG	-	chr4.3:624979-624998	MS.gene95889:CDS	35.0%
!!	ATTGCTGTGTAATGGTTTTG+TGG	-	chr4.3:624225-624244	MS.gene95889:CDS	35.0%
!!!	TGCATTCATGTCATTTTCTG+AGG	-	chr4.3:624692-624711	MS.gene95889:CDS	35.0%
!!!	TTGCTGTGTAATGGTTTTGT+GGG	-	chr4.3:624226-624245	MS.gene95889:CDS	35.0%
	AAATACCTTCTTCTTGGTGG+TGG	+	chr4.3:623892-623911	None:intergenic	40.0%
	AGACTTTACTCTCTTGATGC+TGG	-	chr4.3:623708-623727	MS.gene95889:intron	40.0%
	ATCATGTCGGAATTGTCGAT+TGG	+	chr4.3:623102-623121	None:intergenic	40.0%
	ATCTGACCAACTGTAAGTTG+AGG	-	chr4.3:623565-623584	MS.gene95889:intron	40.0%
	ATGGTGGCCTATCAAGTAAA+TGG	+	chr4.3:624806-624825	None:intergenic	40.0%
	ATGTTGTTCTATCATCCGAC+GGG	-	chr4.3:623232-623251	MS.gene95889:intron	40.0%
	CTGAGTCTAGCATTAAGATC+TGG	-	chr4.3:623787-623806	MS.gene95889:intron	40.0%
	CTTTGTGTTTCAGTCCTAAC+AGG	-	chr4.3:623745-623764	MS.gene95889:intron	40.0%
	GATGTTGTTCTATCATCCGA+CGG	-	chr4.3:623231-623250	MS.gene95889:intron	40.0%
	GCGCAAATCACTCTATTCAA+TGG	+	chr4.3:624380-624399	None:intergenic	40.0%
	GGTCAGATTCCAAACCTTAA+CGG	+	chr4.3:623553-623572	None:intergenic	40.0%
	TCTTCAGCCAACAATTGTCT+CGG	-	chr4.3:623512-623531	MS.gene95889:intron	40.0%
	TGCAAGTACACTATCCAAGA+TGG	-	chr4.3:623441-623460	MS.gene95889:intron	40.0%
	TGGTTTCTGTTCAATCCTGT+TGG	-	chr4.3:624329-624348	MS.gene95889:CDS	40.0%
	TGTGTTCCTCAACTTACAGT+TGG	+	chr4.3:623574-623593	None:intergenic	40.0%
!	AAGATGGAGTGATTTTGCTG+TGG	-	chr4.3:623667-623686	MS.gene95889:intron	40.0%
!	ATGGTGATGCTCATTCTGAT+TGG	-	chr4.3:623460-623479	MS.gene95889:intron	40.0%
!	GAGCATTGTTGAGGATTTGA+AGG	-	chr4.3:623824-623843	MS.gene95889:intron	40.0%
!	TCATGTCGGAATTGTCGATT+GGG	+	chr4.3:623101-623120	None:intergenic	40.0%
!	TGGTGATGCTCATTCTGATT+GGG	-	chr4.3:623461-623480	MS.gene95889:intron	40.0%
!!	ACAGGATGATGGATTTGTCA+CGG	+	chr4.3:623137-623156	None:intergenic	40.0%
!!	AGATGGAGTGATTTTGCTGT+GGG	-	chr4.3:623668-623687	MS.gene95889:intron	40.0%
!!	AGTGATTTTGCTGTGGGATT+TGG	-	chr4.3:623674-623693	MS.gene95889:intron	40.0%
!!	ATTAAGCTCTGGAACACTCT+TGG	-	chr4.3:623414-623433	MS.gene95889:intron	40.0%
	AACAATTGTCTCGGCGTCAT+GGG	-	chr4.3:623521-623540	MS.gene95889:intron	45.0%
	AAGTTGAGGAACACACTTGC+TGG	-	chr4.3:623579-623598	MS.gene95889:intron	45.0%
	ACTGAAGCTGATGCTGCTAT+TGG	-	chr4.3:623858-623877	MS.gene95889:intron	45.0%
	AGTTTGAACTGGAGTGCAGA+CGG	-	chr4.3:624949-624968	MS.gene95889:CDS	45.0%
	CAGAATGAGCATCACCATCT+TGG	+	chr4.3:623458-623477	None:intergenic	45.0%
	CTGAACGAAATGAGAGTGAC+CGG	+	chr4.3:623211-623230	None:intergenic	45.0%
	GTGACAAATCCATCATCCTG+TGG	-	chr4.3:623136-623155	MS.gene95889:intron	45.0%
	GTTATCGATGGAGAAAGCGA+CGG	+	chr4.3:623361-623380	None:intergenic	45.0%
	GTTTCAGTCCTAACAGGTAC+TGG	-	chr4.3:623751-623770	MS.gene95889:intron	45.0%
	TGATACCACCACCAAGAAGA+AGG	-	chr4.3:623884-623903	MS.gene95889:intron	45.0%
	TGTGCTTCTGGTGGTAAAGA+TGG	-	chr4.3:623651-623670	MS.gene95889:intron	45.0%
	TGTTCCAGAGCTTAATCGTG+CGG	+	chr4.3:623410-623429	None:intergenic	45.0%
!	AACACACTTGCTGGACATTC+TGG	-	chr4.3:623588-623607	MS.gene95889:intron	45.0%
!	AATTGTTGGCTGAAGAGTGC+TGG	+	chr4.3:623508-623527	None:intergenic	45.0%
!	AGAAGCACAGAGAGAACCAT+CGG	+	chr4.3:623640-623659	None:intergenic	45.0%
!	AGTTTGCTCTGTCTGGTTCA+TGG	-	chr4.3:623256-623275	MS.gene95889:intron	45.0%
!	CATGTCGGAATTGTCGATTG+GGG	+	chr4.3:623100-623119	None:intergenic	45.0%
!	CTTTGGTGTGACCAACGAAT+CGG	+	chr4.3:623329-623348	None:intergenic	45.0%
!	GTTTGCTCTGTCTGGTTCAT+GGG	-	chr4.3:623257-623276	MS.gene95889:intron	45.0%
!!	ATTGTTGGCTGAAGAGTGCT+GGG	+	chr4.3:623507-623526	None:intergenic	45.0%
!!	CAGGATGATGGATTTGTCAC+GGG	+	chr4.3:623136-623155	None:intergenic	45.0%
	AATGAGAGTGACCGGTGAGA+CGG	+	chr4.3:623203-623222	None:intergenic	50.0%
	ACCAAGGAGGACAAGACCTA+CGG	-	chr4.3:623165-623184	MS.gene95889:intron	50.0%
	AGCGACGGAGAGAACATCTT+TGG	+	chr4.3:623346-623365	None:intergenic	50.0%
	CAACAATTGTCTCGGCGTCA+TGG	-	chr4.3:623520-623539	MS.gene95889:intron	50.0%
	CACGATCTGACGGTTATCGA+TGG	+	chr4.3:623373-623392	None:intergenic	50.0%
	CATCCTGTGGCATCTTACCA+AGG	-	chr4.3:623149-623168	MS.gene95889:intron	50.0%
	CATGACGCCGAGACAATTGT+TGG	+	chr4.3:623522-623541	None:intergenic	50.0%
	CGGTCACTCTCATTTCGTTC+AGG	-	chr4.3:623209-623228	MS.gene95889:intron	50.0%
	GAAGCACAGAGAGAACCATC+GGG	+	chr4.3:623639-623658	None:intergenic	50.0%
	GAAGCTGATGCTGCTATTGG+TGG	-	chr4.3:623861-623880	MS.gene95889:intron	50.0%
	GAGAAGCAGACACGATCTGA+CGG	+	chr4.3:623383-623402	None:intergenic	50.0%
	GATGGTTCTCTCTGTGCTTC+TGG	-	chr4.3:623639-623658	MS.gene95889:intron	50.0%
	GGTAAGATGCCACAGGATGA+TGG	+	chr4.3:623148-623167	None:intergenic	50.0%
	TTGCTGTGGGATTTGGCTGA+GGG	-	chr4.3:623681-623700	MS.gene95889:intron	50.0%
!	TTTGCTGTGGGATTTGGCTG+AGG	-	chr4.3:623680-623699	MS.gene95889:intron	50.0%
!!	ACTGTTGCTGTTTCACCCGA+TGG	-	chr4.3:623621-623640	MS.gene95889:intron	50.0%
!!	GACGGAAGCACCTTGTTTAG+TGG	-	chr4.3:624967-624986	MS.gene95889:CDS	50.0%
!!	GATGATGGATTTGTCACGGG+AGG	+	chr4.3:623133-623152	None:intergenic	50.0%
!!	GGAGAGCAAGAGCATTGTTG+AGG	-	chr4.3:623815-623834	MS.gene95889:intron	50.0%
!!	TTGTTGGCTGAAGAGTGCTG+GGG	+	chr4.3:623506-623525	None:intergenic	50.0%
	AACGTCAGTGTGAGCACGCA+TGG	+	chr4.3:623061-623080	None:intergenic	55.0%
	AGACAGAGCAAACTGCCCGT+CGG	+	chr4.3:623250-623269	None:intergenic	55.0%
	CCACACTCGGACAACACCAT+CGG	+	chr4.3:624998-625017	None:intergenic	55.0%
	CCTCCTTGGTAAGATGCCAC+AGG	+	chr4.3:623155-623174	None:intergenic	55.0%
	CCTGTGGCATCTTACCAAGG+AGG	-	chr4.3:623152-623171	MS.gene95889:intron	55.0%
	GCACAGAGCCAGTACCTGTT+AGG	+	chr4.3:623762-623781	None:intergenic	55.0%
	GGAGGCAGTGACGATCATGT+CGG	+	chr4.3:623115-623134	None:intergenic	55.0%
	GGGACAGGACCGTTAAGGTT+TGG	-	chr4.3:623541-623560	MS.gene95889:intron	55.0%
	GGTTCTCTCTGTGCTTCTGG+TGG	-	chr4.3:623642-623661	MS.gene95889:intron	55.0%
	GTCATGGGACAGGACCGTTA+AGG	-	chr4.3:623536-623555	MS.gene95889:intron	55.0%
	GTGACCGCACGATTAAGCTC+TGG	-	chr4.3:623403-623422	MS.gene95889:intron	55.0%
	GTTGTCCGAGTGTGGGGAAT+CGG	-	chr4.3:625003-625022	MS.gene95889:CDS	55.0%
	TTGTCCGAGTGTGGGGAATC+GGG	-	chr4.3:625004-625023	MS.gene95889:CDS	55.0%
!	ACCGTAGGTCTTGTCCTCCT+TGG	+	chr4.3:623169-623188	None:intergenic	55.0%
!	GCTCTGTCTGGTTCATGGGA+CGG	-	chr4.3:623261-623280	MS.gene95889:intron	55.0%
!!	CGATGGTGTTGTCCGAGTGT+GGG	-	chr4.3:624996-625015	MS.gene95889:CDS	55.0%
!!	GATGGTGTTGTCCGAGTGTG+GGG	-	chr4.3:624997-625016	MS.gene95889:CDS	55.0%
!!	GCTGAGGGTCTTGTTCTTCG+CGG	-	chr4.3:623033-623052	MS.gene95889:CDS	55.0%
	AACGCCCGATTCCCCACACT+CGG	+	chr4.3:625011-625030	None:intergenic	60.0%
	GGACGGTGAGCTTCGTCTCT+GGG	-	chr4.3:623278-623297	MS.gene95889:intron	60.0%
	GTGACCAACGAATCGGCGAG+CGG	+	chr4.3:623322-623341	None:intergenic	60.0%
	TTGTCTCGGCGTCATGGGAC+AGG	-	chr4.3:623526-623545	MS.gene95889:intron	60.0%
!	GACGGGCAGTTTGCTCTGTC+TGG	-	chr4.3:623249-623268	MS.gene95889:intron	60.0%
!!	CCGATGGTGTTGTCCGAGTG+TGG	-	chr4.3:624995-625014	MS.gene95889:CDS	60.0%
!!	CGTCTCTGGGATCTCAACGC+TGG	-	chr4.3:623291-623310	MS.gene95889:intron	60.0%
	ACCAACGAATCGGCGAGCGG+AGG	+	chr4.3:623319-623338	None:intergenic	65.0%
	GAGAGTGACCGGTGAGACGG+CGG	+	chr4.3:623200-623219	None:intergenic	65.0%
	GGGACGGTGAGCTTCGTCTC+TGG	-	chr4.3:623277-623296	MS.gene95889:intron	65.0%
!!	ACCTCCGCTCGCCGATTCGT+TGG	-	chr4.3:623315-623334	MS.gene95889:intron	65.0%
	AGTGACCGGTGAGACGGCGG+CGG	+	chr4.3:623197-623216	None:intergenic	70.0%
	GTGACCGGTGAGACGGCGGC+GGG	+	chr4.3:623196-623215	None:intergenic	75.0%
	TGACCGGTGAGACGGCGGCG+GGG	+	chr4.3:623195-623214	None:intergenic	75.0%
!	ACGGCGGCGGGGGACACCGT+AGG	+	chr4.3:623184-623203	None:intergenic	80.0%
!	GACCGGTGAGACGGCGGCGG+GGG	+	chr4.3:623194-623213	None:intergenic	80.0%
!	GTCCCCCGCCGCCGTCTCAC+CGG	-	chr4.3:623189-623208	MS.gene95889:intron	80.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	623030	625035	623030	ID=MS.gene95889
chr4.3	mRNA	623030	625035	623030	ID=MS.gene95889.t1;Parent=MS.gene95889
chr4.3	exon	624160	625035	624160	ID=MS.gene95889.t1.exon1;Parent=MS.gene95889.t1
chr4.3	CDS	624160	625035	624160	ID=cds.MS.gene95889.t1;Parent=MS.gene95889.t1
chr4.3	exon	623030	623131	623030	ID=MS.gene95889.t1.exon2;Parent=MS.gene95889.t1
chr4.3	CDS	623030	623131	623030	ID=cds.MS.gene95889.t1;Parent=MS.gene95889.t1

Gene Sequence

>MS.gene95889

ATGGCTGAGGGTCTTGTTCTTCGCGGCACCATGCGTGCTCACACTGACGTTGTTACAGCAATTGCAACCCCAATCGACAATTCCGACATGATCGTCACTGCCTCCCGTGACAAATCCATCATCCTGTGGCATCTTACCAAGGAGGACAAGACCTACGGTGTCCCCCGCCGCCGTCTCACCGGTCACTCTCATTTCGTTCAGGATGTTGTTCTATCATCCGACGGGCAGTTTGCTCTGTCTGGTTCATGGGACGGTGAGCTTCGTCTCTGGGATCTCAACGCTGGAACCTCCGCTCGCCGATTCGTTGGTCACACCAAAGATGTTCTCTCCGTCGCTTTCTCCATCGATAACCGTCAGATCGTGTCTGCTTCTCGTGACCGCACGATTAAGCTCTGGAACACTCTTGGTGAGTGCAAGTACACTATCCAAGATGGTGATGCTCATTCTGATTGGGTTAGCTGTGTCAGATTCAGCCCCAGCACTCTTCAGCCAACAATTGTCTCGGCGTCATGGGACAGGACCGTTAAGGTTTGGAATCTGACCAACTGTAAGTTGAGGAACACACTTGCTGGACATTCTGGATATGTCAACACTGTTGCTGTTTCACCCGATGGTTCTCTCTGTGCTTCTGGTGGTAAAGATGGAGTGATTTTGCTGTGGGATTTGGCTGAGGGAAAGAGACTTTACTCTCTTGATGCTGGTTCCATTATTCATGCTTTGTGTTTCAGTCCTAACAGGTACTGGCTCTGTGCTGCTACTGAGTCTAGCATTAAGATCTGGGATTTGGAGAGCAAGAGCATTGTTGAGGATTTGAAGGTTGATCTCAAGACTGAAGCTGATGCTGCTATTGGTGGTGATACCACCACCAAGAAGAAGGTATTTTTTTTTTTTTACAATTCACTTTTAATTCCGATGCTGTTGATATATTGTTGTTGTTGATTGGTAGTTTAGAATTAGGCATTGTTTACAATCATAATACATGATTTGTTTATTATTTGGGGGTTGTTGTTTAACCCTTATGCTCCCTGACATTAATATGTGCTATGATATGTTTATGTTTATTTTTATATGTTAACTTTGTTATGAGAATTTGTGTTGACTGACTTGATACTTGATTATTTAGTTGTGATGTTACTAGTGTCTACTCTTAATTTGAAATGATTGATTCTTGTTTATTCTTATGTTGAAATGAACAATTGCTGTGTAATGGTTTTGTGGGTAACTTGTTTGTTTGATTGACATAAGGCATTGTTAACCCTTGTTTTATGTTTTTGTTTGAAGAGACTGTGTTTAACTAATTGGTTTCTGTTCAATCCTGTTGGTTTAACTGACAAGTAACATTGTTAACCATTGAATAGAGTGATTTGCGCTAATGTTTGTGTTGAATTGTCATATGTGTGACATTGAAATAAATATTTTCTTTCAGTTTGATTTTCCTCAGTTAATACTGAACTTTGACCATTTGTTGTTGAAATACTGTTGTTTGATAAGTATAATAGCAAATGCCTTCCTTACATTCATGTCATTTTGAGATTAATCCATTTGAATTACTTTCATTTGATTAATCAATGGCAAAAACCTTTTCATTTTTGAAATCAGCTTCAAGTTAATGTTCTAATATTTGATTGTAAATAATTGATGTAAATGATCAAACGTCTTCCTTGCATTCATGTCATTTTCTGAGGTTAATCCGAAATATTTTTTAGGTTTATCTCCTTGGTGATATTTATCATTCATGGTTTGAAATGTTATGTTTTAAGTCAACCATCTAGTCCATTTACTTGATAGGCCACCATTGTTGCATTCATATCAATATATTGTATTTTTCTGTTACATTTTCAAAGTTTGTCATACTTTTTGCAACTCAACCATTAATTCGGTATATTTTTGCCGTTGTATTTCAGGTTATCTACTGTACTAGTTTGAACTGGAGTGCAGACGGAAGCACCTTGTTTAGTGGATATACCGATGGTGTTGTCCGAGTGTGGGGAATCGGGCGTTACTAA

Protein sequence

>MS.gene95889.t1

MAEGLVLRGTMRAHTDVVTAIATPIDNSDMIVTASRDKSIILWHLTKEDKTYGVPRRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLNAGTSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQDGDAHSDWVSCVRFSPSTLQPTIVSASWDRTVKVWNLTNCKLRNTLAGHSGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGSIIHALCFSPNRYWLCAATESSIKIWDLESKSIVEDLKVDLKTEADAAIGGDTTTKKKVIYCTSLNWSADGSTLFSGYTDGVVRVWGIGRY