Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026735.t1 | XP_003604353.1 | 98.3 | 519 | 9 | 0 | 1 | 519 | 1 | 519 | 2.40E-296 | 1027.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026735.t1 | Q9M8L4 | 78.0 | 522 | 112 | 1 | 1 | 519 | 1 | 522 | 1.8e-244 | 846.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026735.t1 | G7JGV7 | 98.3 | 519 | 9 | 0 | 1 | 519 | 1 | 519 | 1.8e-296 | 1027.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene026735 | MS.gene25914 | PPI |
| MS.gene026735 | MS.gene022257 | PPI |
| MS.gene026735 | MS.gene70587 | PPI |
| MS.gene026735 | MS.gene074392 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026735.t1 | MTR_4g009920 | 98.266 | 519 | 9 | 0 | 1 | 519 | 1 | 519 | 0.0 | 1048 |
| MS.gene026735.t1 | MTR_4g009920 | 98.225 | 507 | 9 | 0 | 1 | 507 | 1 | 507 | 0.0 | 1026 |
| MS.gene026735.t1 | MTR_4g009900 | 42.453 | 106 | 27 | 4 | 309 | 413 | 60 | 132 | 1.22e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026735.t1 | AT1G80460 | 77.969 | 522 | 112 | 1 | 1 | 519 | 1 | 522 | 0.0 | 832 |
| MS.gene026735.t1 | AT1G80460 | 71.839 | 522 | 104 | 2 | 1 | 519 | 1 | 482 | 0.0 | 771 |
Find 114 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATAGACACTTGGTTGATT+TGG | 0.226109 | 4.1:-85848741 | MS.gene026735:CDS |
| GATTCAATGCACAAAGATTC+TGG | 0.239459 | 4.1:-85848046 | MS.gene026735:CDS |
| CCGGATTAGCTGTTGGGATT+TGG | 0.260537 | 4.1:-85847366 | MS.gene026735:CDS |
| CTCTTCACAATGCTCTTGTT+TGG | 0.272363 | 4.1:-85849977 | MS.gene026735:CDS |
| AGATCCTTCGAGTGCATAAT+TGG | 0.272694 | 4.1:+85848330 | None:intergenic |
| ATTAGTAATTCAGAAATTAT+AGG | 0.274502 | 4.1:-85848571 | MS.gene026735:CDS |
| ATTATAGGCAATGTTTCTTC+TGG | 0.283345 | 4.1:-85848556 | MS.gene026735:CDS |
| GCATGATCCAATGGAGATAT+TGG | 0.330740 | 4.1:-85850138 | MS.gene026735:CDS |
| TCTTCTGGATGGCCAGTTGC+TGG | 0.334542 | 4.1:-85848541 | MS.gene026735:CDS |
| GCACTGAAATATGTGCTAAT+AGG | 0.336748 | 4.1:+85848841 | None:intergenic |
| TTCGTACTACCTCTGTTTGC+AGG | 0.345227 | 4.1:-85849947 | MS.gene026735:intron |
| TAGGTTCATCAGCATTGTTC+GGG | 0.358557 | 4.1:+85848663 | None:intergenic |
| TATAGAGGCTCTGGCATTAG+AGG | 0.360156 | 4.1:-85848239 | MS.gene026735:CDS |
| AAAGAGAGACTACTCTTGTT+TGG | 0.360374 | 4.1:-85850019 | MS.gene026735:CDS |
| TTAGGTTCATCAGCATTGTT+CGG | 0.360447 | 4.1:+85848662 | None:intergenic |
| ATCCCAATCGCTGGATGTTT+AGG | 0.365473 | 4.1:-85848517 | MS.gene026735:CDS |
| CTCTAATGGTTGAAGAAAAT+AGG | 0.366750 | 4.1:-85847285 | MS.gene026735:CDS |
| CATTACCAAGGCAGTGGATA+AGG | 0.374568 | 4.1:-85850099 | MS.gene026735:CDS |
| TTTGAAACTTCTGTGGTTGA+TGG | 0.380869 | 4.1:-85848818 | MS.gene026735:CDS |
| GCATAATTGGTTGGAGCATT+CGG | 0.386294 | 4.1:+85848343 | None:intergenic |
| GGGGAGGCTAAAAGTACTTA+TGG | 0.390080 | 4.1:-85848454 | MS.gene026735:CDS |
| TGGTTGATTTGGAACTTAAC+CGG | 0.394053 | 4.1:-85848730 | MS.gene026735:CDS |
| GAAGGATCTGTTGCTATTGC+TGG | 0.394891 | 4.1:-85848316 | MS.gene026735:CDS |
| CCAAATCCCAACAGCTAATC+CGG | 0.396390 | 4.1:+85847366 | None:intergenic |
| TGTTGGGCAGGCGGATTTGT+TGG | 0.401082 | 4.1:-85847449 | MS.gene026735:intron |
| TCACAATGCTCTTGTTTGGA+TGG | 0.410072 | 4.1:-85849973 | MS.gene026735:CDS |
| GATAAATCAGCTAAACCAAT+TGG | 0.412511 | 4.1:-85851114 | MS.gene026735:CDS |
| TTGGACAAGCGTGCCGTAAA+GGG | 0.413690 | 4.1:-85848474 | MS.gene026735:CDS |
| GACAAAGGATTGAAAGCTAT+TGG | 0.414357 | 4.1:-85850053 | MS.gene026735:CDS |
| TTGCTGGAGCTGCGGTGCAG+TGG | 0.423140 | 4.1:-85848300 | MS.gene026735:CDS |
| ATGCAGCCGGATTAGCTGTT+GGG | 0.423707 | 4.1:-85847372 | MS.gene026735:CDS |
| TGCTAAAGATATAGAGGCTC+TGG | 0.423985 | 4.1:-85848248 | MS.gene026735:CDS |
| ATCTGCTACTGCTTGTTCCT+TGG | 0.424132 | 4.1:+85851148 | None:intergenic |
| TGGGATTTGAAGTGCTTTCA+AGG | 0.425709 | 4.1:+85848615 | None:intergenic |
| AAGAGTAGTCTCTCTTTGAT+TGG | 0.427095 | 4.1:+85850025 | None:intergenic |
| CTTGGACAAGCGTGCCGTAA+AGG | 0.431970 | 4.1:-85848475 | MS.gene026735:CDS |
| TGTTGCCTTATCCACTGCCT+TGG | 0.460974 | 4.1:+85850094 | None:intergenic |
| GATCAACATGCGGCAATGCT+TGG | 0.462984 | 4.1:-85848493 | MS.gene026735:CDS |
| TACAAATGCTAAAGATATAG+AGG | 0.466654 | 4.1:-85848254 | MS.gene026735:CDS |
| CACCTAAACATCCAGCGATT+GGG | 0.469707 | 4.1:+85848515 | None:intergenic |
| TTGAAACAGGAGACTGGAAA+AGG | 0.470396 | 4.1:-85848908 | MS.gene026735:intron |
| TCAACTTGATGAGATCCAAT+TGG | 0.485313 | 4.1:+85851099 | None:intergenic |
| AGACTGGAAAAGGAGTTATC+TGG | 0.485413 | 4.1:-85848898 | MS.gene026735:CDS |
| GGTAGATTCATCCCAGTTGA+GGG | 0.489859 | 4.1:+85848636 | None:intergenic |
| TCAACTATAGCTTATAAGCT+TGG | 0.494881 | 4.1:-85848367 | MS.gene026735:CDS |
| GCTGTTGTTTCAATGTCAGC+TGG | 0.495390 | 4.1:+85847409 | None:intergenic |
| TAGGCAATGTTTCTTCTGGA+TGG | 0.500957 | 4.1:-85848552 | MS.gene026735:CDS |
| ACACTCTCCAATATCTCCAT+TGG | 0.503678 | 4.1:+85850131 | None:intergenic |
| GCTAAAAGTACTTATGGTAC+AGG | 0.511298 | 4.1:-85848448 | MS.gene026735:CDS |
| CAGTGGCTTAGAGATGGTCT+TGG | 0.511553 | 4.1:-85848283 | MS.gene026735:CDS |
| TACTTCGTTCCTGCCTTCAA+CGG | 0.512729 | 4.1:-85848196 | MS.gene026735:CDS |
| TCACCTAAACATCCAGCGAT+TGG | 0.515930 | 4.1:+85848514 | None:intergenic |
| GACATTGAAACAACAGCACT+TGG | 0.517787 | 4.1:-85847403 | MS.gene026735:CDS |
| GCGATTGGGATACCAGCAAC+TGG | 0.520352 | 4.1:+85848529 | None:intergenic |
| CAATCCTCCTTTCACTCCAC+CGG | 0.520536 | 4.1:+85848711 | None:intergenic |
| CGGAGCAAACAATCCGTTGA+AGG | 0.521467 | 4.1:+85848183 | None:intergenic |
| CCTTCGAGTGCATAATTGGT+TGG | 0.522306 | 4.1:+85848334 | None:intergenic |
| AACTTAACCGGTGGAGTGAA+AGG | 0.522805 | 4.1:-85848718 | MS.gene026735:CDS |
| GCTTTCATTCTACTGAATAC+CGG | 0.525684 | 4.1:-85848424 | MS.gene026735:CDS |
| AGGTAGATTCATCCCAGTTG+AGG | 0.526716 | 4.1:+85848635 | None:intergenic |
| ATTCATAATTACCCTGCTTG+TGG | 0.528009 | 4.1:+85851060 | None:intergenic |
| CTTGGAGCAGCCTATGCAGC+CGG | 0.534264 | 4.1:-85847385 | MS.gene026735:CDS |
| ACTCAGTTCTATCCACAAGC+AGG | 0.534411 | 4.1:-85851072 | MS.gene026735:CDS |
| CAACCTCTTGATGCAGACTC+AGG | 0.539217 | 4.1:-85847963 | MS.gene026735:intron |
| GCAAACAATCCGTTGAAGGC+AGG | 0.539309 | 4.1:+85848187 | None:intergenic |
| AACGAAGTAAACACCACCAT+TGG | 0.540620 | 4.1:+85848210 | None:intergenic |
| GTGGATAAGGCAACAGCTGA+TGG | 0.545692 | 4.1:-85850086 | MS.gene026735:CDS |
| GTTGCTGGTATCCCAATCGC+TGG | 0.548254 | 4.1:-85848526 | MS.gene026735:CDS |
| GGTTTGCATTACCAAGGCAG+TGG | 0.553429 | 4.1:-85850105 | MS.gene026735:CDS |
| TGATTTAACTACTCCTTCGC+CGG | 0.553584 | 4.1:+85848405 | None:intergenic |
| AACAGCTAATCCGGCTGCAT+AGG | 0.557636 | 4.1:+85847375 | None:intergenic |
| TCAGTGCTTTGAAACTTCTG+TGG | 0.564226 | 4.1:-85848825 | MS.gene026735:CDS |
| TGTTTGGAACAATAGACACT+TGG | 0.574976 | 4.1:-85848750 | MS.gene026735:CDS |
| TATGCAGCCGGATTAGCTGT+TGG | 0.578831 | 4.1:-85847373 | MS.gene026735:CDS |
| TTCATTGGTGCAATTGACCA+AGG | 0.579046 | 4.1:-85851165 | MS.gene026735:CDS |
| CTTGTTTGGAGCAAATCCAC+TGG | 0.582009 | 4.1:-85850005 | MS.gene026735:CDS |
| TGGACAAGCGTGCCGTAAAG+GGG | 0.584821 | 4.1:-85848473 | MS.gene026735:CDS |
| GCGGTGCAGTGGCTTAGAGA+TGG | 0.585645 | 4.1:-85848289 | MS.gene026735:CDS |
| TTTCTTCAACCATTAGAGGA+CGG | 0.587520 | 4.1:+85847290 | None:intergenic |
| AAAACATATGCTCTCAAGCA+CGG | 0.589815 | 4.1:+85848087 | None:intergenic |
| AATAACAAGGTATACTAGCA+AGG | 0.590541 | 4.1:-85848125 | MS.gene026735:CDS |
| ACGGATTGTTTGCTCCGTGG+TGG | 0.592208 | 4.1:-85848177 | MS.gene026735:CDS |
| GGAAAATGTGGATGCTGTCA+AGG | 0.594676 | 4.1:-85848797 | MS.gene026735:CDS |
| TGTTGCTATTGCTGGAGCTG+CGG | 0.596487 | 4.1:-85848308 | MS.gene026735:CDS |
| CAAACAAGAGCATTGTGAAG+AGG | 0.598923 | 4.1:+85849978 | None:intergenic |
| TCAACGGATTGTTTGCTCCG+TGG | 0.599214 | 4.1:-85848180 | MS.gene026735:CDS |
| ATGGGTGGAGCATGATCCAA+TGG | 0.600525 | 4.1:-85850147 | MS.gene026735:CDS |
| AAACCTGAGTCTGCATCAAG+AGG | 0.602107 | 4.1:+85847960 | None:intergenic |
| GGAGATATTGGAGAGTGTGA+AGG | 0.603088 | 4.1:-85850126 | MS.gene026735:CDS |
| TATAAGCTATAGTTGACAGA+AGG | 0.613391 | 4.1:+85848374 | None:intergenic |
| CTCAGTTCTATCCACAAGCA+GGG | 0.613869 | 4.1:-85851071 | MS.gene026735:intron |
| GATGCTCGTGGGATTTGTAT+CGG | 0.615161 | 4.1:-85848148 | MS.gene026735:CDS |
| TCTGTGGTTGATGGAAAATG+TGG | 0.618354 | 4.1:-85848809 | MS.gene026735:CDS |
| CTATAGTTGACAGAAGGCCA+TGG | 0.621798 | 4.1:+85848380 | None:intergenic |
| GCATTAGAGGTAGAATCCAA+TGG | 0.626496 | 4.1:-85848226 | MS.gene026735:CDS |
| ATTCTACTGAATACCGGCGA+AGG | 0.627934 | 4.1:-85848418 | MS.gene026735:CDS |
| CTGGAAAAGGAGTTATCTGG+TGG | 0.628620 | 4.1:-85848895 | MS.gene026735:CDS |
| TTGTTGATTTAACAGATGGG+TGG | 0.628858 | 4.1:-85850162 | MS.gene026735:intron |
| GATGGATTCAATGTGGACAA+AGG | 0.629833 | 4.1:-85850068 | MS.gene026735:CDS |
| TGTGAAGGTTTGCATTACCA+AGG | 0.634692 | 4.1:-85850111 | MS.gene026735:CDS |
| CCAACCAATTATGCACTCGA+AGG | 0.641638 | 4.1:-85848334 | MS.gene026735:CDS |
| TGGTGGCGTGATGATGCTCG+TGG | 0.642857 | 4.1:-85848160 | MS.gene026735:CDS |
| GGAGTAGTTAAATCAAACCA+TGG | 0.660899 | 4.1:-85848397 | MS.gene026735:CDS |
| GGTGGCGTGATGATGCTCGT+GGG | 0.662938 | 4.1:-85848159 | MS.gene026735:CDS |
| ATTGTGAAGAGGAGCACCAG+TGG | 0.665290 | 4.1:+85849989 | None:intergenic |
| ACAAGCGTGCCGTAAAGGGG+AGG | 0.668849 | 4.1:-85848470 | MS.gene026735:CDS |
| CGAGCATCATCACGCCACCA+CGG | 0.670243 | 4.1:+85848163 | None:intergenic |
| AAAAGAGGACCTGCAAACAG+AGG | 0.674216 | 4.1:+85849938 | None:intergenic |
| TTGATTTGGAACTTAACCGG+TGG | 0.677686 | 4.1:-85848727 | MS.gene026735:CDS |
| GGATTTGTATCGGAATAACA+AGG | 0.684634 | 4.1:-85848138 | MS.gene026735:CDS |
| TTAACCGGTGGAGTGAAAGG+AGG | 0.687751 | 4.1:-85848715 | MS.gene026735:CDS |
| ATGTTTAGGTGATCAACATG+CGG | 0.705152 | 4.1:-85848503 | MS.gene026735:CDS |
| AACAGCTGATGGATTCAATG+TGG | 0.722250 | 4.1:-85850075 | MS.gene026735:CDS |
| TTAGAGGTAGAATCCAATGG+TGG | 0.726999 | 4.1:-85848223 | MS.gene026735:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTGAAAATTTTGAT+GGG | - | chr4.1:85847382-85847401 | MS.gene026735:CDS | 10.0% |
| !!! | TTTTTTATTGAAAATTTTGA+TGG | - | chr4.1:85847381-85847400 | MS.gene026735:CDS | 10.0% |
| !! | AAAGAGAAAAAGAAAAATAA+GGG | - | chr4.1:85850798-85850817 | MS.gene026735:intron | 15.0% |
| !! | ATTAGTAATTCAGAAATTAT+AGG | - | chr4.1:85849828-85849847 | MS.gene026735:intron | 15.0% |
| !! | TCAATAAAAAAACAAAAAAG+AGG | + | chr4.1:85847372-85847391 | None:intergenic | 15.0% |
| !! | TTAAAAAGTGATCAATTTAA+GGG | + | chr4.1:85849024-85849043 | None:intergenic | 15.0% |
| !! | TTTAAAAAGTGATCAATTTA+AGG | + | chr4.1:85849025-85849044 | None:intergenic | 15.0% |
| !!! | TCTGAATTACTAATAATTTT+AGG | + | chr4.1:85849822-85849841 | None:intergenic | 15.0% |
| !!! | TTGTTGTGTTTTTATAATTA+TGG | - | chr4.1:85847406-85847425 | MS.gene026735:CDS | 15.0% |
| !!! | TTTGTTGTATTTTGTAATTA+TGG | - | chr4.1:85847477-85847496 | MS.gene026735:intron | 15.0% |
| !! | ATGATCTATATAATGAAATC+AGG | + | chr4.1:85849255-85849274 | None:intergenic | 20.0% |
| !! | CAAAGAGAAAAAGAAAAATA+AGG | - | chr4.1:85850797-85850816 | MS.gene026735:intron | 20.0% |
| !! | CTTCAAATTAAATATGTATC+CGG | + | chr4.1:85848653-85848672 | None:intergenic | 20.0% |
| !! | GTTATATATACCAATATCAA+GGG | - | chr4.1:85850696-85850715 | MS.gene026735:intron | 20.0% |
| !! | TAACGAAATATTACAATGAA+AGG | + | chr4.1:85848180-85848199 | None:intergenic | 20.0% |
| !! | TATCGAAAAGATAGAAAATA+TGG | + | chr4.1:85850513-85850532 | None:intergenic | 20.0% |
| !! | TGTTATATATACCAATATCA+AGG | - | chr4.1:85850695-85850714 | MS.gene026735:intron | 20.0% |
| !! | TTGACAATAATTTGAGAAAA+TGG | - | chr4.1:85848595-85848614 | MS.gene026735:CDS | 20.0% |
| !! | TTGTAAATCTGATACATTAA+TGG | + | chr4.1:85847814-85847833 | None:intergenic | 20.0% |
| !!! | AAACAAAATAGTCTTAATAG+AGG | + | chr4.1:85850752-85850771 | None:intergenic | 20.0% |
| !!! | AACAAAATAGTCTTAATAGA+GGG | + | chr4.1:85850751-85850770 | None:intergenic | 20.0% |
| !!! | AGAATTTTTGTTGATAATGT+TGG | - | chr4.1:85850933-85850952 | MS.gene026735:intron | 20.0% |
| !!! | ATTTTGATTCTTGAATGTAA+GGG | - | chr4.1:85847610-85847629 | MS.gene026735:intron | 20.0% |
| !!! | ATTTTGTTGAAAATATTGAC+TGG | - | chr4.1:85848199-85848218 | MS.gene026735:CDS | 20.0% |
| !!! | GAATTTTTGTTGATAATGTT+GGG | - | chr4.1:85850934-85850953 | MS.gene026735:intron | 20.0% |
| !!! | GATGTTATTATTTTTGAAAC+AGG | - | chr4.1:85849478-85849497 | MS.gene026735:intron | 20.0% |
| !!! | TATTAGTGAATATTTTTCCT+TGG | + | chr4.1:85849188-85849207 | None:intergenic | 20.0% |
| !!! | TTATTTTCTCAAGTAAAGAA+AGG | + | chr4.1:85850651-85850670 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTTCTCTTTGATT+GGG | + | chr4.1:85850794-85850813 | None:intergenic | 20.0% |
| !!! | TTTTGATTGCAAATTTTGAT+GGG | - | chr4.1:85847537-85847556 | MS.gene026735:intron | 20.0% |
| !!! | TTTTTCTTTTTCTCTTTGAT+TGG | + | chr4.1:85850795-85850814 | None:intergenic | 20.0% |
| !!! | TTTTTGATTGCAAATTTTGA+TGG | - | chr4.1:85847536-85847555 | MS.gene026735:intron | 20.0% |
| ! | AAAAAGAAAGTAGATTGTTG+GGG | - | chr4.1:85851137-85851156 | MS.gene026735:CDS | 25.0% |
| ! | AAGAAAAAAGATGCATTGTT+TGG | - | chr4.1:85849633-85849652 | MS.gene026735:intron | 25.0% |
| ! | AGTAAGAAGAAGAATAAAAG+AGG | + | chr4.1:85848479-85848498 | None:intergenic | 25.0% |
| ! | ATCTATATAATGAAATCAGG+AGG | + | chr4.1:85849252-85849271 | None:intergenic | 25.0% |
| ! | ATTTATCCAAACATAGAGAA+TGG | + | chr4.1:85848979-85848998 | None:intergenic | 25.0% |
| ! | CAGAAAATGTTTATCTTGAT+AGG | - | chr4.1:85850868-85850887 | MS.gene026735:intron | 25.0% |
| ! | CTCAAATGAAACATCAATTT+AGG | + | chr4.1:85848505-85848524 | None:intergenic | 25.0% |
| ! | GAAAAAGAAAGTAGATTGTT+GGG | - | chr4.1:85851136-85851155 | MS.gene026735:CDS | 25.0% |
| ! | GAAAATATGGAACTAAATGA+AGG | + | chr4.1:85850500-85850519 | None:intergenic | 25.0% |
| ! | TAAATTTGTCTTTCAGTAGT+CGG | - | chr4.1:85847666-85847685 | MS.gene026735:intron | 25.0% |
| ! | TACAAATGCTAAAGATATAG+AGG | - | chr4.1:85850145-85850164 | MS.gene026735:CDS | 25.0% |
| ! | TCTATATAATGAAATCAGGA+GGG | + | chr4.1:85849251-85849270 | None:intergenic | 25.0% |
| ! | TGATACTCTCTTAATCTATA+AGG | + | chr4.1:85849163-85849182 | None:intergenic | 25.0% |
| ! | TTGATTTCTTGTAAGCAAAA+AGG | - | chr4.1:85848697-85848716 | MS.gene026735:CDS | 25.0% |
| ! | TTTACGACAAAAACAAACAT+GGG | + | chr4.1:85847509-85847528 | None:intergenic | 25.0% |
| ! | TTTATAGGTATGCTTAATCT+AGG | - | chr4.1:85849118-85849137 | MS.gene026735:intron | 25.0% |
| ! | TTTATCCAAACATAGAGAAT+GGG | + | chr4.1:85848978-85848997 | None:intergenic | 25.0% |
| !! | AACTATCGAAAGACAAATTT+TGG | + | chr4.1:85847862-85847881 | None:intergenic | 25.0% |
| !!! | CATTTTGATTCTTGAATGTA+AGG | - | chr4.1:85847609-85847628 | MS.gene026735:intron | 25.0% |
| !!! | TAGGTTGATACATATAAACT+TGG | - | chr4.1:85850887-85850906 | MS.gene026735:intron | 25.0% |
| !!! | TGTTTGTTGATTTAACAGAT+GGG | - | chr4.1:85848234-85848253 | MS.gene026735:CDS | 25.0% |
| !!! | TTATAGATTAAGAGAGTATC+AGG | - | chr4.1:85849162-85849181 | MS.gene026735:intron | 25.0% |
| !!! | TTGTTTGTTGATTTAACAGA+TGG | - | chr4.1:85848233-85848252 | MS.gene026735:CDS | 25.0% |
| !!! | TTTTGATTCTTGAATGTAAG+GGG | - | chr4.1:85847611-85847630 | MS.gene026735:intron | 25.0% |
| AAATTACATACGCATCTTCA+AGG | + | chr4.1:85847938-85847957 | None:intergenic | 30.0% | |
| AAATTGGTTACACCAAAAGT+TGG | + | chr4.1:85850726-85850745 | None:intergenic | 30.0% | |
| AAGCAAAAACTCATCTTTCT+TGG | + | chr4.1:85850390-85850409 | None:intergenic | 30.0% | |
| AATAACAAGGTATACTAGCA+AGG | - | chr4.1:85850274-85850293 | MS.gene026735:intron | 30.0% | |
| AATTACATACGCATCTTCAA+GGG | + | chr4.1:85847937-85847956 | None:intergenic | 30.0% | |
| ACACTAACAAAACACATTTG+AGG | + | chr4.1:85847698-85847717 | None:intergenic | 30.0% | |
| AGGATGACAAAAAGCAAAAA+AGG | + | chr4.1:85849445-85849464 | None:intergenic | 30.0% | |
| ATAGTCCTGAATGTATCAAT+TGG | + | chr4.1:85848127-85848146 | None:intergenic | 30.0% | |
| ATATGACCATTGTAGGAAAT+GGG | - | chr4.1:85848727-85848746 | MS.gene026735:CDS | 30.0% | |
| ATGTTTCATTTGAGTAAACG+AGG | - | chr4.1:85848511-85848530 | MS.gene026735:CDS | 30.0% | |
| ATTATAGGCAATGTTTCTTC+TGG | - | chr4.1:85849843-85849862 | MS.gene026735:intron | 30.0% | |
| CACTCCAATGAAAACAAAAA+TGG | + | chr4.1:85847583-85847602 | None:intergenic | 30.0% | |
| CTCTAATGGTTGAAGAAAAT+AGG | - | chr4.1:85851114-85851133 | MS.gene026735:CDS | 30.0% | |
| CTTTACGACAAAAACAAACA+TGG | + | chr4.1:85847510-85847529 | None:intergenic | 30.0% | |
| GACTACTGAAAGACAAATTT+AGG | + | chr4.1:85847667-85847686 | None:intergenic | 30.0% | |
| GATAAATCAGCTAAACCAAT+TGG | - | chr4.1:85847285-85847304 | MS.gene026735:CDS | 30.0% | |
| GATATTGTTTAGCATAACCT+GGG | - | chr4.1:85850529-85850548 | MS.gene026735:intron | 30.0% | |
| GGAAAAAGAAAGTAGATTGT+TGG | - | chr4.1:85851135-85851154 | MS.gene026735:CDS | 30.0% | |
| GTAATCCAATTGATACATTC+AGG | - | chr4.1:85848119-85848138 | MS.gene026735:CDS | 30.0% | |
| GTCTTAATAGAGGGTAAAAT+TGG | + | chr4.1:85850742-85850761 | None:intergenic | 30.0% | |
| GTGTCTATTGTTAGTTAGTT+CGG | - | chr4.1:85847898-85847917 | MS.gene026735:intron | 30.0% | |
| TAACATCAACAACATTTCTG+AGG | + | chr4.1:85849465-85849484 | None:intergenic | 30.0% | |
| TATAAGCTATAGTTGACAGA+AGG | + | chr4.1:85850028-85850047 | None:intergenic | 30.0% | |
| TCAACTATAGCTTATAAGCT+TGG | - | chr4.1:85850032-85850051 | MS.gene026735:CDS | 30.0% | |
| TTAAGCTTGTAATCCAAACA+AGG | + | chr4.1:85850555-85850574 | None:intergenic | 30.0% | |
| TTACGACAAAAACAAACATG+GGG | + | chr4.1:85847508-85847527 | None:intergenic | 30.0% | |
| TTTAAAGAAACACATTGACG+TGG | - | chr4.1:85849039-85849058 | MS.gene026735:intron | 30.0% | |
| TTTAGGCATGTTTACATTCA+TGG | + | chr4.1:85847650-85847669 | None:intergenic | 30.0% | |
| ! | AGAAAGATGAGTTTTTGCTT+AGG | - | chr4.1:85850390-85850409 | MS.gene026735:intron | 30.0% |
| ! | ATTTTAGGCAAAATTTCAGC+TGG | + | chr4.1:85849807-85849826 | None:intergenic | 30.0% |
| ! | CTATTTTCTTCAACCATTAG+AGG | + | chr4.1:85851116-85851135 | None:intergenic | 30.0% |
| ! | GAAAGATGAGTTTTTGCTTA+GGG | - | chr4.1:85850391-85850410 | MS.gene026735:intron | 30.0% |
| ! | TCGAAAGAAGATGTTTTCAT+TGG | - | chr4.1:85847219-85847238 | MS.gene026735:CDS | 30.0% |
| ! | TTTTAGGCAAAATTTCAGCT+GGG | + | chr4.1:85849806-85849825 | None:intergenic | 30.0% |
| !! | ATGAACTCATCGTTTTAATG+TGG | - | chr4.1:85849290-85849309 | MS.gene026735:intron | 30.0% |
| !!! | AATTCTGTTTTTGAGGGATA+AGG | - | chr4.1:85849317-85849336 | MS.gene026735:intron | 30.0% |
| !!! | CACTCCATTTTTGTTTTCAT+TGG | - | chr4.1:85847576-85847595 | MS.gene026735:intron | 30.0% |
| !!! | CTTATGGATTTTGTTTTCGT+TGG | - | chr4.1:85847738-85847757 | MS.gene026735:intron | 30.0% |
| !!! | TTATTTTTGAAACAGGAGAC+TGG | - | chr4.1:85849485-85849504 | MS.gene026735:intron | 30.0% |
| AAAACATATGCTCTCAAGCA+CGG | + | chr4.1:85850315-85850334 | None:intergenic | 35.0% | |
| AAAGAGAGACTACTCTTGTT+TGG | - | chr4.1:85848380-85848399 | MS.gene026735:CDS | 35.0% | |
| AAGAGTAGTCTCTCTTTGAT+TGG | + | chr4.1:85848377-85848396 | None:intergenic | 35.0% | |
| ACTAACAATAGACACATTCG+AGG | + | chr4.1:85847893-85847912 | None:intergenic | 35.0% | |
| AGCAAGAAATCCAATCTGAA+GGG | - | chr4.1:85848899-85848918 | MS.gene026735:CDS | 35.0% | |
| ATGTTTAGGTGATCAACATG+CGG | - | chr4.1:85849896-85849915 | MS.gene026735:intron | 35.0% | |
| ATTCATAATTACCCTGCTTG+TGG | + | chr4.1:85847342-85847361 | None:intergenic | 35.0% | |
| CAACTGCAGTGTTTAAACAT+CGG | + | chr4.1:85847990-85848009 | None:intergenic | 35.0% | |
| CAATAGACACTTGGTTGATT+TGG | - | chr4.1:85849658-85849677 | MS.gene026735:intron | 35.0% | |
| CATATGACCATTGTAGGAAA+TGG | - | chr4.1:85848726-85848745 | MS.gene026735:CDS | 35.0% | |
| CATGTACATATGACCATTGT+AGG | - | chr4.1:85848720-85848739 | MS.gene026735:CDS | 35.0% | |
| CGATATTGTTTAGCATAACC+TGG | - | chr4.1:85850528-85850547 | MS.gene026735:intron | 35.0% | |
| CTCTTTGATTGGGTAAAGAA+GGG | + | chr4.1:85850784-85850803 | None:intergenic | 35.0% | |
| GACAAAGGATTGAAAGCTAT+TGG | - | chr4.1:85848346-85848365 | MS.gene026735:CDS | 35.0% | |
| GATTATGTTGCTAGCAATGA+TGG | + | chr4.1:85848934-85848953 | None:intergenic | 35.0% | |
| GATTCAATGCACAAAGATTC+TGG | - | chr4.1:85850353-85850372 | MS.gene026735:intron | 35.0% | |
| GCACTGAAATATGTGCTAAT+AGG | + | chr4.1:85849561-85849580 | None:intergenic | 35.0% | |
| GCTTTCATTCTACTGAATAC+CGG | - | chr4.1:85849975-85849994 | MS.gene026735:CDS | 35.0% | |
| GGAGTAGTTAAATCAAACCA+TGG | - | chr4.1:85850002-85850021 | MS.gene026735:CDS | 35.0% | |
| GGATTTGTATCGGAATAACA+AGG | - | chr4.1:85850261-85850280 | MS.gene026735:intron | 35.0% | |
| GTAAACGAGGACAATTCATT+TGG | - | chr4.1:85848524-85848543 | MS.gene026735:CDS | 35.0% | |
| GTATGTAGATAAGCTCACAA+AGG | - | chr4.1:85850617-85850636 | MS.gene026735:intron | 35.0% | |
| GTTAGTTCCATGGTTGAAAT+TGG | - | chr4.1:85849405-85849424 | MS.gene026735:intron | 35.0% | |
| TAACATCAAAAGCTTAGCTC+TGG | + | chr4.1:85849389-85849408 | None:intergenic | 35.0% | |
| TACGACAAAAACAAACATGG+GGG | + | chr4.1:85847507-85847526 | None:intergenic | 35.0% | |
| TAGTGTAAAAGAGACACTTG+AGG | - | chr4.1:85847712-85847731 | MS.gene026735:intron | 35.0% | |
| TAGTTCACCAATTTCAACCA+TGG | + | chr4.1:85849415-85849434 | None:intergenic | 35.0% | |
| TCAACTTGATGAGATCCAAT+TGG | + | chr4.1:85847303-85847322 | None:intergenic | 35.0% | |
| TCTCTTTGATTGGGTAAAGA+AGG | + | chr4.1:85850785-85850804 | None:intergenic | 35.0% | |
| TCTTAATCTATAAGGCACGT+TGG | + | chr4.1:85849155-85849174 | None:intergenic | 35.0% | |
| TTAGGTTCATCAGCATTGTT+CGG | + | chr4.1:85849740-85849759 | None:intergenic | 35.0% | |
| TTTCTTCAACCATTAGAGGA+CGG | + | chr4.1:85851112-85851131 | None:intergenic | 35.0% | |
| ! | AGCTTTTGATGTTAGTTCCA+TGG | - | chr4.1:85849395-85849414 | MS.gene026735:intron | 35.0% |
| ! | AGTTGGTATTCCCTTGATAT+TGG | + | chr4.1:85850709-85850728 | None:intergenic | 35.0% |
| ! | ATCAAGGGAATACCAACTTT+TGG | - | chr4.1:85850711-85850730 | MS.gene026735:intron | 35.0% |
| ! | ATGCTTAATCTAGGACCAAT+TGG | - | chr4.1:85849127-85849146 | MS.gene026735:intron | 35.0% |
| ! | TGCTTAATCTAGGACCAATT+GGG | - | chr4.1:85849128-85849147 | MS.gene026735:intron | 35.0% |
| ! | TGTTTGGAACAATAGACACT+TGG | - | chr4.1:85849649-85849668 | MS.gene026735:intron | 35.0% |
| ! | TTTGAAACTTCTGTGGTTGA+TGG | - | chr4.1:85849581-85849600 | MS.gene026735:intron | 35.0% |
| !! | AACTCATCGTTTTAATGTGG+TGG | - | chr4.1:85849293-85849312 | MS.gene026735:intron | 35.0% |
| !! | AGATTTCGTTTTCGATTCGA+AGG | - | chr4.1:85851061-85851080 | MS.gene026735:intron | 35.0% |
| !! | GATTGCAAATTTTGATGGGT+TGG | - | chr4.1:85847541-85847560 | MS.gene026735:intron | 35.0% |
| !! | GCTAAAAGTACTTATGGTAC+AGG | - | chr4.1:85849951-85849970 | MS.gene026735:CDS | 35.0% |
| !! | TGGTTGATTTGGAACTTAAC+CGG | - | chr4.1:85849669-85849688 | MS.gene026735:intron | 35.0% |
| !! | TTGTTGATTTAACAGATGGG+TGG | - | chr4.1:85848237-85848256 | MS.gene026735:CDS | 35.0% |
| !! | TTTTGATTCTTGAATGCGTG+AGG | - | chr4.1:85847773-85847792 | MS.gene026735:intron | 35.0% |
| !!! | ATCTTCAAGGGTGTCTTTTA+TGG | + | chr4.1:85847925-85847944 | None:intergenic | 35.0% |
| !!! | GGTGGTAATTCTGTTTTTGA+GGG | - | chr4.1:85849311-85849330 | MS.gene026735:intron | 35.0% |
| !!! | TGGTGGTAATTCTGTTTTTG+AGG | - | chr4.1:85849310-85849329 | MS.gene026735:intron | 35.0% |
| !!! | TTTTGATGGGTTGGTAAGTA+TGG | - | chr4.1:85847550-85847569 | MS.gene026735:intron | 35.0% |
| !!! | TTTTGTTGATAATGTTGGGC+AGG | - | chr4.1:85850938-85850957 | MS.gene026735:intron | 35.0% |
| AACGAAGTAAACACCACCAT+TGG | + | chr4.1:85850192-85850211 | None:intergenic | 40.0% | |
| AACGACTCTGTACTGAATGT+TGG | + | chr4.1:85848763-85848782 | None:intergenic | 40.0% | |
| AAGTATCTGTGCTACATAGC+TGG | - | chr4.1:85848670-85848689 | MS.gene026735:CDS | 40.0% | |
| AATCCAATCTGAAGGGAATC+TGG | - | chr4.1:85848906-85848925 | MS.gene026735:intron | 40.0% | |
| ACACTCTCCAATATCTCCAT+TGG | + | chr4.1:85848271-85848290 | None:intergenic | 40.0% | |
| ACCAACCAATCTCAAATCGA+TGG | + | chr4.1:85848020-85848039 | None:intergenic | 40.0% | |
| ACGACAAAAACAAACATGGG+GGG | + | chr4.1:85847506-85847525 | None:intergenic | 40.0% | |
| AGACTGGAAAAGGAGTTATC+TGG | - | chr4.1:85849501-85849520 | MS.gene026735:intron | 40.0% | |
| AGATCCTTCGAGTGCATAAT+TGG | + | chr4.1:85850072-85850091 | None:intergenic | 40.0% | |
| AGTATCTGTGCTACATAGCT+GGG | - | chr4.1:85848671-85848690 | MS.gene026735:CDS | 40.0% | |
| ATCCAATCTGAAGGGAATCT+GGG | - | chr4.1:85848907-85848926 | MS.gene026735:intron | 40.0% | |
| ATCGTCTGATCTCTATCCAA+TGG | - | chr4.1:85848852-85848871 | MS.gene026735:CDS | 40.0% | |
| CAGCAAGAAATCCAATCTGA+AGG | - | chr4.1:85848898-85848917 | MS.gene026735:CDS | 40.0% | |
| CATTGACGTGGTGAAAAAGA+AGG | - | chr4.1:85849051-85849070 | MS.gene026735:intron | 40.0% | |
| CCAACCAATCTCAAATCGAT+GGG | + | chr4.1:85848019-85848038 | None:intergenic | 40.0% | |
| CTCGATCTTGAATCAATGGT+CGG | + | chr4.1:85848068-85848087 | None:intergenic | 40.0% | |
| CTCTTCACAATGCTCTTGTT+TGG | - | chr4.1:85848422-85848441 | MS.gene026735:CDS | 40.0% | |
| CTTTGCCCATTCTCTATGTT+TGG | - | chr4.1:85848970-85848989 | MS.gene026735:intron | 40.0% | |
| GAACCTAAAAACCCTCAACT+GGG | - | chr4.1:85849752-85849771 | MS.gene026735:intron | 40.0% | |
| GACATTGAAACAACAGCACT+TGG | - | chr4.1:85850996-85851015 | MS.gene026735:intron | 40.0% | |
| GCAGACAAGTACTAACATGT+CGG | + | chr4.1:85850843-85850862 | None:intergenic | 40.0% | |
| GCATGATCCAATGGAGATAT+TGG | - | chr4.1:85848261-85848280 | MS.gene026735:CDS | 40.0% | |
| GCATTAGAGGTAGAATCCAA+TGG | - | chr4.1:85850173-85850192 | MS.gene026735:intron | 40.0% | |
| GCGGTTGAAATCAATATCAG+TGG | - | chr4.1:85848087-85848106 | MS.gene026735:CDS | 40.0% | |
| TAGGCAATGTTTCTTCTGGA+TGG | - | chr4.1:85849847-85849866 | MS.gene026735:intron | 40.0% | |
| TAGGTTCATCAGCATTGTTC+GGG | + | chr4.1:85849739-85849758 | None:intergenic | 40.0% | |
| TATCCACATGTGTCAAACAC+CGG | - | chr4.1:85848631-85848650 | MS.gene026735:CDS | 40.0% | |
| TCGATCTTGAATCAATGGTC+GGG | + | chr4.1:85848067-85848086 | None:intergenic | 40.0% | |
| TGAACCTAAAAACCCTCAAC+TGG | - | chr4.1:85849751-85849770 | MS.gene026735:intron | 40.0% | |
| TGATTTAACTACTCCTTCGC+CGG | + | chr4.1:85849997-85850016 | None:intergenic | 40.0% | |
| TGCTAAAGATATAGAGGCTC+TGG | - | chr4.1:85850151-85850170 | MS.gene026735:intron | 40.0% | |
| TGTAAAAGAGACACTTGAGG+AGG | - | chr4.1:85847715-85847734 | MS.gene026735:intron | 40.0% | |
| TGTGAAGGTTTGCATTACCA+AGG | - | chr4.1:85848288-85848307 | MS.gene026735:CDS | 40.0% | |
| TTAGAGGTAGAATCCAATGG+TGG | - | chr4.1:85850176-85850195 | MS.gene026735:intron | 40.0% | |
| TTCATTGGTGCAATTGACCA+AGG | - | chr4.1:85847234-85847253 | MS.gene026735:CDS | 40.0% | |
| TTGAAACAGGAGACTGGAAA+AGG | - | chr4.1:85849491-85849510 | MS.gene026735:intron | 40.0% | |
| ! | AACATCGGATCTTTTACAGC+AGG | + | chr4.1:85847975-85847994 | None:intergenic | 40.0% |
| ! | ACACATTTTGTAGAGAGCTG+TGG | - | chr4.1:85849531-85849550 | MS.gene026735:intron | 40.0% |
| ! | ACATCGGATCTTTTACAGCA+GGG | + | chr4.1:85847974-85847993 | None:intergenic | 40.0% |
| ! | GAGTTTTTGCTTAGGGTTGA+TGG | - | chr4.1:85850398-85850417 | MS.gene026735:intron | 40.0% |
| ! | GATGGATTCAATGTGGACAA+AGG | - | chr4.1:85848331-85848350 | MS.gene026735:CDS | 40.0% |
| ! | GCATAATTGGTTGGAGCATT+CGG | + | chr4.1:85850059-85850078 | None:intergenic | 40.0% |
| ! | TACTTTTAGCCTCCCCTTTA+CGG | + | chr4.1:85849941-85849960 | None:intergenic | 40.0% |
| ! | TAGTGTTTTCCGTCCTCTAA+TGG | - | chr4.1:85851100-85851119 | MS.gene026735:CDS | 40.0% |
| ! | TCACAATGCTCTTGTTTGGA+TGG | - | chr4.1:85848426-85848445 | MS.gene026735:CDS | 40.0% |
| ! | TGGGATTTGAAGTGCTTTCA+AGG | + | chr4.1:85849787-85849806 | None:intergenic | 40.0% |
| !! | AACAGCTGATGGATTCAATG+TGG | - | chr4.1:85848324-85848343 | MS.gene026735:CDS | 40.0% |
| !! | ACCATTGATTCAAGATCGAG+CGG | - | chr4.1:85848068-85848087 | MS.gene026735:CDS | 40.0% |
| !! | ATTAAGAGAGTATCAGGCCA+AGG | - | chr4.1:85849168-85849187 | MS.gene026735:intron | 40.0% |
| !! | CAAACAAGAGCATTGTGAAG+AGG | + | chr4.1:85848424-85848443 | None:intergenic | 40.0% |
| !! | TCAGTGCTTTGAAACTTCTG+TGG | - | chr4.1:85849574-85849593 | MS.gene026735:intron | 40.0% |
| !! | TCTGTGGTTGATGGAAAATG+TGG | - | chr4.1:85849590-85849609 | MS.gene026735:intron | 40.0% |
| !! | TTCACCCATCGATTTGAGAT+TGG | - | chr4.1:85848012-85848031 | MS.gene026735:CDS | 40.0% |
| !! | TTGATTTGGAACTTAACCGG+TGG | - | chr4.1:85849672-85849691 | MS.gene026735:intron | 40.0% |
| !!! | TTTTTGCTTAGGGTTGATGG+TGG | - | chr4.1:85850401-85850420 | MS.gene026735:intron | 40.0% |
| AAAAGAGGACCTGCAAACAG+AGG | + | chr4.1:85848464-85848483 | None:intergenic | 45.0% | |
| AAACCTGAGTCTGCATCAAG+AGG | + | chr4.1:85850442-85850461 | None:intergenic | 45.0% | |
| AACTTAACCGGTGGAGTGAA+AGG | - | chr4.1:85849681-85849700 | MS.gene026735:intron | 45.0% | |
| ACCGCTCGATCTTGAATCAA+TGG | + | chr4.1:85848072-85848091 | None:intergenic | 45.0% | |
| ACTCAGTTCTATCCACAAGC+AGG | - | chr4.1:85847327-85847346 | MS.gene026735:CDS | 45.0% | |
| AGGTAGATTCATCCCAGTTG+AGG | + | chr4.1:85849767-85849786 | None:intergenic | 45.0% | |
| AGTCAGCGTTTCTAAGCCAT+TGG | + | chr4.1:85848871-85848890 | None:intergenic | 45.0% | |
| ATCCCAATCGCTGGATGTTT+AGG | - | chr4.1:85849882-85849901 | MS.gene026735:intron | 45.0% | |
| ATCTGCTACTGCTTGTTCCT+TGG | + | chr4.1:85847254-85847273 | None:intergenic | 45.0% | |
| ATTCTACTGAATACCGGCGA+AGG | - | chr4.1:85849981-85850000 | MS.gene026735:CDS | 45.0% | |
| CACCTAAACATCCAGCGATT+GGG | + | chr4.1:85849887-85849906 | None:intergenic | 45.0% | |
| CATTACCAAGGCAGTGGATA+AGG | - | chr4.1:85848300-85848319 | MS.gene026735:CDS | 45.0% | |
| CCAAATCCCAACAGCTAATC+CGG | + | chr4.1:85851036-85851055 | None:intergenic | 45.0% | |
| CCAACCAATTATGCACTCGA+AGG | - | chr4.1:85850065-85850084 | MS.gene026735:CDS | 45.0% | |
| CCTTCGAGTGCATAATTGGT+TGG | + | chr4.1:85850068-85850087 | None:intergenic | 45.0% | |
| CGAGGACAATTCATTTGGCT+AGG | - | chr4.1:85848529-85848548 | MS.gene026735:CDS | 45.0% | |
| CTATAGTTGACAGAAGGCCA+TGG | + | chr4.1:85850022-85850041 | None:intergenic | 45.0% | |
| CTCAGTTCTATCCACAAGCA+GGG | - | chr4.1:85847328-85847347 | MS.gene026735:CDS | 45.0% | |
| CTGGAAAAGGAGTTATCTGG+TGG | - | chr4.1:85849504-85849523 | MS.gene026735:intron | 45.0% | |
| GAGGAACCCATTTCCTACAA+TGG | + | chr4.1:85848736-85848755 | None:intergenic | 45.0% | |
| GATGCTCGTGGGATTTGTAT+CGG | - | chr4.1:85850251-85850270 | MS.gene026735:intron | 45.0% | |
| GGAAAATGTGGATGCTGTCA+AGG | - | chr4.1:85849602-85849621 | MS.gene026735:intron | 45.0% | |
| GGTAGATTCATCCCAGTTGA+GGG | + | chr4.1:85849766-85849785 | None:intergenic | 45.0% | |
| TACTTCGTTCCTGCCTTCAA+CGG | - | chr4.1:85850203-85850222 | MS.gene026735:intron | 45.0% | |
| TATCCGGTGTTTGACACATG+TGG | + | chr4.1:85848637-85848656 | None:intergenic | 45.0% | |
| TCACCTAAACATCCAGCGAT+TGG | + | chr4.1:85849888-85849907 | None:intergenic | 45.0% | |
| TCTTGATGCAGACTCAGGTT+TGG | - | chr4.1:85850441-85850460 | MS.gene026735:intron | 45.0% | |
| TTCGTACTACCTCTGTTTGC+AGG | - | chr4.1:85848452-85848471 | MS.gene026735:CDS | 45.0% | |
| TTGTAATCCAAACAAGGCCC+AGG | + | chr4.1:85850549-85850568 | None:intergenic | 45.0% | |
| ! | CATCCCAGTTGAGGGTTTTT+AGG | + | chr4.1:85849758-85849777 | None:intergenic | 45.0% |
| ! | CTTGTTTGGAGCAAATCCAC+TGG | - | chr4.1:85848394-85848413 | MS.gene026735:CDS | 45.0% |
| ! | GAAGGATCTGTTGCTATTGC+TGG | - | chr4.1:85850083-85850102 | MS.gene026735:CDS | 45.0% |
| ! | GGAGATATTGGAGAGTGTGA+AGG | - | chr4.1:85848273-85848292 | MS.gene026735:CDS | 45.0% |
| ! | TATAGAGGCTCTGGCATTAG+AGG | - | chr4.1:85850160-85850179 | MS.gene026735:intron | 45.0% |
| !! | CCCATCGATTTGAGATTGGT+TGG | - | chr4.1:85848016-85848035 | MS.gene026735:CDS | 45.0% |
| !! | GCTGTTGTTTCAATGTCAGC+TGG | + | chr4.1:85850993-85851012 | None:intergenic | 45.0% |
| !! | GGGGAGGCTAAAAGTACTTA+TGG | - | chr4.1:85849945-85849964 | MS.gene026735:intron | 45.0% |
| !! | TCTTTTACAGCAGGGCATCT+AGG | + | chr4.1:85847966-85847985 | None:intergenic | 45.0% |
| !! | TGTTGATAATGTTGGGCAGG+CGG | - | chr4.1:85850941-85850960 | MS.gene026735:intron | 45.0% |
| !!! | TCATAATTTTTTTTTTTTAT+AGG | - | chr4.1:85849103-85849122 | MS.gene026735:intron | 5.0% |
| AACAGCTAATCCGGCTGCAT+AGG | + | chr4.1:85851027-85851046 | None:intergenic | 50.0% | |
| ATGGGTGGAGCATGATCCAA+TGG | - | chr4.1:85848252-85848271 | MS.gene026735:CDS | 50.0% | |
| CAACCTCTTGATGCAGACTC+AGG | - | chr4.1:85850436-85850455 | MS.gene026735:intron | 50.0% | |
| CAATCCTCCTTTCACTCCAC+CGG | + | chr4.1:85849691-85849710 | None:intergenic | 50.0% | |
| CAGTGGCTTAGAGATGGTCT+TGG | - | chr4.1:85850116-85850135 | MS.gene026735:CDS | 50.0% | |
| CGGAGCAAACAATCCGTTGA+AGG | + | chr4.1:85850219-85850238 | None:intergenic | 50.0% | |
| GACCCAGATTCCCTTCAGAT+TGG | + | chr4.1:85848912-85848931 | None:intergenic | 50.0% | |
| GAGACACTTGAGGAGGCTTA+TGG | - | chr4.1:85847722-85847741 | MS.gene026735:intron | 50.0% | |
| GATCAACATGCGGCAATGCT+TGG | - | chr4.1:85849906-85849925 | MS.gene026735:intron | 50.0% | |
| GCAAACAATCCGTTGAAGGC+AGG | + | chr4.1:85850215-85850234 | None:intergenic | 50.0% | |
| GGTTTGCATTACCAAGGCAG+TGG | - | chr4.1:85848294-85848313 | MS.gene026735:CDS | 50.0% | |
| GTGGATAAGGCAACAGCTGA+TGG | - | chr4.1:85848313-85848332 | MS.gene026735:CDS | 50.0% | |
| TAAGGCACGTTGGACCCAAT+TGG | + | chr4.1:85849145-85849164 | None:intergenic | 50.0% | |
| TGTACTGAATGTTGGCCACG+AGG | + | chr4.1:85848755-85848774 | None:intergenic | 50.0% | |
| TGTTGCCTTATCCACTGCCT+TGG | + | chr4.1:85848308-85848327 | None:intergenic | 50.0% | |
| TTAACCGGTGGAGTGAAAGG+AGG | - | chr4.1:85849684-85849703 | MS.gene026735:intron | 50.0% | |
| TTGGACAAGCGTGCCGTAAA+GGG | - | chr4.1:85849925-85849944 | MS.gene026735:intron | 50.0% | |
| ! | TGTAGGAAATGGGTTCCTCG+TGG | - | chr4.1:85848737-85848756 | MS.gene026735:CDS | 50.0% |
| ! | TGTTGCTATTGCTGGAGCTG+CGG | - | chr4.1:85850091-85850110 | MS.gene026735:CDS | 50.0% |
| !! | AGCATAACCTGGGCCTTGTT+TGG | - | chr4.1:85850539-85850558 | MS.gene026735:intron | 50.0% |
| !! | ATGCAGCCGGATTAGCTGTT+GGG | - | chr4.1:85851027-85851046 | MS.gene026735:intron | 50.0% |
| !! | ATTGTGAAGAGGAGCACCAG+TGG | + | chr4.1:85848413-85848432 | None:intergenic | 50.0% |
| !! | CCGGATTAGCTGTTGGGATT+TGG | - | chr4.1:85851033-85851052 | MS.gene026735:intron | 50.0% |
| !! | TATGCAGCCGGATTAGCTGT+TGG | - | chr4.1:85851026-85851045 | MS.gene026735:intron | 50.0% |
| !! | TCAACGGATTGTTTGCTCCG+TGG | - | chr4.1:85850219-85850238 | MS.gene026735:intron | 50.0% |
| CTTGGACAAGCGTGCCGTAA+AGG | - | chr4.1:85849924-85849943 | MS.gene026735:intron | 55.0% | |
| GCGATTGGGATACCAGCAAC+TGG | + | chr4.1:85849873-85849892 | None:intergenic | 55.0% | |
| GTTGCTGGTATCCCAATCGC+TGG | - | chr4.1:85849873-85849892 | MS.gene026735:intron | 55.0% | |
| TCTTCTGGATGGCCAGTTGC+TGG | - | chr4.1:85849858-85849877 | MS.gene026735:intron | 55.0% | |
| TGGACAAGCGTGCCGTAAAG+GGG | - | chr4.1:85849926-85849945 | MS.gene026735:intron | 55.0% | |
| ! | ACGGATTGTTTGCTCCGTGG+TGG | - | chr4.1:85850222-85850241 | MS.gene026735:intron | 55.0% |
| ! | TGTTGGGCAGGCGGATTTGT+TGG | - | chr4.1:85850950-85850969 | MS.gene026735:intron | 55.0% |
| ACAAGCGTGCCGTAAAGGGG+AGG | - | chr4.1:85849929-85849948 | MS.gene026735:intron | 60.0% | |
| CGAGCATCATCACGCCACCA+CGG | + | chr4.1:85850239-85850258 | None:intergenic | 60.0% | |
| CTTGGAGCAGCCTATGCAGC+CGG | - | chr4.1:85851014-85851033 | MS.gene026735:intron | 60.0% | |
| GCGGTGCAGTGGCTTAGAGA+TGG | - | chr4.1:85850110-85850129 | MS.gene026735:CDS | 60.0% | |
| ! | GGTGGCGTGATGATGCTCGT+GGG | - | chr4.1:85850240-85850259 | MS.gene026735:intron | 60.0% |
| ! | TGGTGGCGTGATGATGCTCG+TGG | - | chr4.1:85850239-85850258 | MS.gene026735:intron | 60.0% |
| TTGCTGGAGCTGCGGTGCAG+TGG | - | chr4.1:85850099-85850118 | MS.gene026735:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 85847216 | 85851205 | 85847216 | ID=MS.gene026735 |
| chr4.1 | mRNA | 85847216 | 85851205 | 85847216 | ID=MS.gene026735.t1;Parent=MS.gene026735 |
| chr4.1 | exon | 85851072 | 85851205 | 85851072 | ID=MS.gene026735.t1.exon1;Parent=MS.gene026735.t1 |
| chr4.1 | CDS | 85851072 | 85851205 | 85851072 | ID=cds.MS.gene026735.t1;Parent=MS.gene026735.t1 |
| chr4.1 | exon | 85849948 | 85850169 | 85849948 | ID=MS.gene026735.t1.exon2;Parent=MS.gene026735.t1 |
| chr4.1 | CDS | 85849948 | 85850169 | 85849948 | ID=cds.MS.gene026735.t1;Parent=MS.gene026735.t1 |
| chr4.1 | exon | 85847964 | 85848921 | 85847964 | ID=MS.gene026735.t1.exon3;Parent=MS.gene026735.t1 |
| chr4.1 | CDS | 85847964 | 85848921 | 85847964 | ID=cds.MS.gene026735.t1;Parent=MS.gene026735.t1 |
| chr4.1 | exon | 85847216 | 85847461 | 85847216 | ID=MS.gene026735.t1.exon4;Parent=MS.gene026735.t1 |
| chr4.1 | CDS | 85847216 | 85847461 | 85847216 | ID=cds.MS.gene026735.t1;Parent=MS.gene026735.t1 |
| Gene Sequence |
| Protein sequence |
