AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene026902

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene026902.t1 MTR_2g075300 60.412 485 133 3 1 437 1 474 0.0 577
MS.gene026902.t1 MTR_2g084535 59.179 414 149 7 7 407 5 411 1.97e-170 488
MS.gene026902.t1 MTR_7g105400 36.595 511 220 9 9 439 11 497 3.67e-107 326
MS.gene026902.t1 MTR_7g105390 39.696 461 204 7 50 441 44 499 1.28e-105 322
MS.gene026902.t1 MTR_4g097590 35.518 473 212 9 53 439 55 520 1.88e-94 294
MS.gene026902.t1 MTR_7g105390 37.668 446 182 7 50 441 62 465 2.29e-90 282
MS.gene026902.t1 MTR_8g076210 38.415 164 86 5 57 213 17 172 1.05e-22 100
MS.gene026902.t1 MTR_5g021530 35.185 216 102 9 11 213 5 195 1.03e-21 97.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene026902.t1 AT5G22860 42.540 496 209 12 12 439 7 494 6.59e-118 354
MS.gene026902.t1 AT5G22860 47.129 418 193 11 12 409 7 416 1.58e-114 343
MS.gene026902.t1 AT5G22860 47.129 418 193 11 12 409 7 416 1.58e-114 343
MS.gene026902.t1 AT5G22860 50.000 370 167 7 52 409 53 416 2.21e-114 343
MS.gene026902.t1 AT5G22860 50.000 370 167 7 52 409 53 416 2.26e-113 342
MS.gene026902.t1 AT5G22860 50.000 370 167 7 52 409 53 416 2.26e-113 342
MS.gene026902.t1 AT5G22860 50.000 370 167 7 52 409 53 416 2.26e-113 342
MS.gene026902.t1 AT2G24280 37.074 499 231 9 10 439 5 489 6.52e-107 325
MS.gene026902.t1 AT2G24280 39.904 416 215 8 10 404 5 406 5.43e-99 303
MS.gene026902.t1 AT5G22860 51.266 316 137 6 52 356 53 362 3.94e-97 296
MS.gene026902.t1 AT5G65760 35.547 512 240 11 7 440 5 504 7.01e-96 298
MS.gene026902.t1 AT3G28680 44.944 178 87 4 184 355 18 190 1.98e-43 151
MS.gene026902.t1 AT4G36195 36.199 221 111 8 1 210 1 202 3.14e-23 102
MS.gene026902.t1 AT4G36195 36.199 221 111 8 1 210 1 202 3.14e-23 102
MS.gene026902.t1 AT4G36195 36.199 221 111 8 1 210 1 202 3.74e-23 102
MS.gene026902.t1 AT4G36190 37.037 162 86 5 57 210 49 202 1.90e-19 90.9
MS.gene026902.t1 AT2G18080 36.196 163 87 5 57 210 49 203 8.80e-19 89.0

Find 121 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTGGCAAGTCTTGAATTTC+TGG 0.103087 2.2:+18022423 None:intergenic
GGATGTTCTGATTCATTTAA+AGG 0.152019 2.2:-18025043 MS.gene026902:CDS
AATGCTTCCCTTGATTTAAA+TGG 0.157015 2.2:+18025123 None:intergenic
TCATTGAAATTGAGGGTTTC+AGG 0.175778 2.2:+18025488 None:intergenic
TACAACATATCTTTGTTTAA+AGG 0.210814 2.2:+18025397 None:intergenic
TGCCCCAATACTTGTCTCTT+TGG 0.234570 2.2:-18025342 MS.gene026902:CDS
ACAAATTCATATTACATTCT+TGG 0.237490 2.2:-18022496 MS.gene026902:CDS
TGTTGTAAATTTCAAGTATT+GGG 0.241494 2.2:-18025381 MS.gene026902:CDS
TCACTATCAGTGTATTTATC+TGG 0.262447 2.2:+18022114 None:intergenic
AATTGAGGGTTTCAGGGTTT+TGG 0.285807 2.2:+18025495 None:intergenic
GATATCTGTGAGGGCATTAA+TGG 0.323021 2.2:-18022219 MS.gene026902:CDS
GCCCCAATACTTGTCTCTTT+GGG 0.330791 2.2:-18025341 MS.gene026902:CDS
GAGCGATGCAAGAAAGATTA+TGG 0.336880 2.2:-18021866 MS.gene026902:CDS
CTGTTGAAGCATCAGGGATT+TGG 0.367151 2.2:+18025553 None:intergenic
CTTGAATTTCTGGCTTAGAA+TGG 0.372736 2.2:+18022433 None:intergenic
CAGTGCTTGCTACATGGTTT+CGG 0.373629 2.2:-18022768 MS.gene026902:CDS
GGAGTGGAGCTGACGAGGCC+AGG 0.378526 2.2:+18022716 None:intergenic
TGCAAAGGAATTTAACGGTT+GGG 0.380715 2.2:-18022085 MS.gene026902:CDS
CCCTCACAGATATCCGCAAC+TGG 0.392376 2.2:+18022228 None:intergenic
CACCCAAAGAGACAAGTATT+GGG 0.395483 2.2:+18025339 None:intergenic
CACTCAACTGTTGAAGCATC+AGG 0.395931 2.2:+18025546 None:intergenic
GATATCCTTAGTAGGATATA+CGG 0.401625 2.2:-18022180 MS.gene026902:CDS
CATTGAAATTGAGGGTTTCA+GGG 0.404798 2.2:+18025489 None:intergenic
ATTGATGCAAAGGAATTTAA+CGG 0.409107 2.2:-18022090 MS.gene026902:CDS
CGTTCAGAGTTGCACGGAAA+TGG 0.416783 2.2:-18021957 MS.gene026902:intron
ATGTTGTAAATTTCAAGTAT+TGG 0.419169 2.2:-18025382 MS.gene026902:CDS
AAAGTCTTCATTGAAATTGA+GGG 0.419394 2.2:+18025481 None:intergenic
GAAAGTCTTCATTGAAATTG+AGG 0.422429 2.2:+18025480 None:intergenic
CCACATCACCATCGGGGCCC+TGG 0.427669 2.2:-18022734 MS.gene026902:CDS
GTACACAAGTAGAGCTTTCA+AGG 0.428593 2.2:+18025265 None:intergenic
TTTCAGTTAGATAGTTGAAA+TGG 0.431390 2.2:+18025429 None:intergenic
ATTTAACGGTTGGGGTTGGC+AGG 0.437970 2.2:-18022076 MS.gene026902:intron
GGAGGTATTGTGGCTGCCTA+TGG 0.438323 2.2:-18022159 MS.gene026902:CDS
AATCAGTGCCATTTAAATCA+AGG 0.440026 2.2:-18025131 MS.gene026902:CDS
AAGTCCCCGGTGATTGTGAT+TGG 0.441949 2.2:-18025003 MS.gene026902:CDS
TTCAAGAACACAAGCACATT+GGG 0.443393 2.2:-18025102 MS.gene026902:CDS
TTCTTGAAGTTGAAAGGTTG+AGG 0.443975 2.2:+18021896 None:intergenic
AGTCCCCGGTGATTGTGATT+GGG 0.444479 2.2:-18025002 MS.gene026902:CDS
CGATACTTCTTGCAGTCCAT+TGG 0.445870 2.2:-18022319 MS.gene026902:intron
CCAGGGCCCCGATGGTGATG+TGG 0.449045 2.2:+18022734 None:intergenic
CCATGTTATACGTGACCCTC+AGG 0.450308 2.2:+18022271 None:intergenic
GGCATTAATGGAGCTGCCTA+TGG 0.457456 2.2:-18022207 MS.gene026902:CDS
CCACCCAAAGAGACAAGTAT+TGG 0.461702 2.2:+18025338 None:intergenic
CAGGGCCCCGATGGTGATGT+GGG 0.461958 2.2:+18022735 None:intergenic
AATATCCCCACATCACCATC+GGG 0.462616 2.2:-18022741 MS.gene026902:CDS
TCTTTGATCAACTAACCATC+CGG 0.466410 2.2:+18021247 None:intergenic
TTCTTGCAGTCCATTGGAAA+AGG 0.469534 2.2:-18022313 MS.gene026902:intron
GAGTGGAGCTGACGAGGCCA+GGG 0.470743 2.2:+18022717 None:intergenic
GCAAAGGAATTTAACGGTTG+GGG 0.478149 2.2:-18022084 MS.gene026902:CDS
GAACATCCGCGTAATCTTGA+AGG 0.480782 2.2:+18025058 None:intergenic
CCAATACTTGTCTCTTTGGG+TGG 0.490052 2.2:-18025338 MS.gene026902:CDS
ACGTACATGTCCTCCGTAGC+AGG 0.501884 2.2:+18021814 None:intergenic
ACGGAAATGGTGGCGCCCAT+TGG 0.509165 2.2:-18021944 MS.gene026902:CDS
CTTAGAATGGAAAGACCATT+CGG 0.513113 2.2:+18022446 None:intergenic
GCATAGTTCTTGAAGTTGAA+AGG 0.513354 2.2:+18021890 None:intergenic
ATGGTGGCGCCCATTGGCAT+AGG 0.519789 2.2:-18021938 MS.gene026902:CDS
AGTTGAGTGTATTGTCAGAA+TGG 0.520900 2.2:-18025532 MS.gene026902:CDS
ACTATGCAGTGCTTGCTACA+TGG 0.523584 2.2:-18022774 MS.gene026902:intron
TCTTGTTAGCATCGGTACTA+CGG 0.524106 2.2:-18025156 MS.gene026902:intron
GCATTATCCGTCATAAAATC+CGG 0.524995 2.2:+18025293 None:intergenic
GGGCTACTTAAACGCAGCGC+AGG 0.525535 2.2:-18025082 MS.gene026902:CDS
ATGCAAAGGAATTTAACGGT+TGG 0.530074 2.2:-18022086 MS.gene026902:CDS
GAAGAATTCCCTATGCCAAT+GGG 0.531114 2.2:+18021929 None:intergenic
ATGGAGATGATATCCTTAGT+AGG 0.531817 2.2:-18022188 MS.gene026902:CDS
CTTTGATCAACTAACCATCC+GGG 0.533337 2.2:+18021248 None:intergenic
AAATATCCCCACATCACCAT+CGG 0.533495 2.2:-18022742 MS.gene026902:CDS
CCTCACAGATATCCGCAACT+GGG 0.533634 2.2:+18022229 None:intergenic
ATCAGTGCCATTTAAATCAA+GGG 0.544935 2.2:-18025130 MS.gene026902:CDS
AAGCATCAGGGATTTGGTGG+TGG 0.546599 2.2:+18025559 None:intergenic
AGGAATTTAACGGTTGGGGT+TGG 0.548262 2.2:-18022080 MS.gene026902:CDS
GTCCCCGGTGATTGTGATTG+GGG 0.549779 2.2:-18025001 MS.gene026902:CDS
GGAAGAATTCCCTATGCCAA+TGG 0.553453 2.2:+18021928 None:intergenic
CATTCGGCTGAGACGCTACT+CGG 0.553610 2.2:+18022462 None:intergenic
GTTGTAAATTTCAAGTATTG+GGG 0.553624 2.2:-18025380 MS.gene026902:CDS
TTTATCACTTCCTGCTACGG+AGG 0.553697 2.2:-18021824 MS.gene026902:CDS
TACCTCCGTATATCCTACTA+AGG 0.556731 2.2:+18022175 None:intergenic
TGACGAGGCCAGGGCCCCGA+TGG 0.559413 2.2:+18022726 None:intergenic
CTTGCAAATGAAAATGATCC+CGG 0.559865 2.2:-18021266 MS.gene026902:CDS
TAGCAGGAAGTGATAAAATG+AGG 0.561200 2.2:+18021830 None:intergenic
AAGTAGAGCTTTCAAGGAAG+CGG 0.564133 2.2:+18025271 None:intergenic
TTGAAGCATCAGGGATTTGG+TGG 0.568991 2.2:+18025556 None:intergenic
ATTCAAGAACACAAGCACAT+TGG 0.570819 2.2:-18025103 MS.gene026902:CDS
ATTAGACGCGCAGAAGTCCC+CGG 0.572087 2.2:-18025016 MS.gene026902:CDS
TAGGATATACGGAGGTATTG+TGG 0.572161 2.2:-18022169 MS.gene026902:CDS
AGGTAGAGATAATCAAGAGA+TGG 0.572497 2.2:-18021217 MS.gene026902:CDS
TGATAGTGATATTGATGCAA+AGG 0.581365 2.2:-18022100 MS.gene026902:CDS
GTAGAGGAGTGGAGCTGACG+AGG 0.584668 2.2:+18022711 None:intergenic
TGGTGGCGCCCATTGGCATA+GGG 0.585572 2.2:-18021937 MS.gene026902:CDS
TCCCCGGTGATTGTGATTGG+GGG 0.591156 2.2:-18025000 MS.gene026902:CDS
AAGTGAAATCGAATATTCGC+CGG 0.593816 2.2:-18025312 MS.gene026902:CDS
GTGTGATACTATCGAAGTAG+AGG 0.596110 2.2:+18022695 None:intergenic
CTCACAGATATCCGCAACTG+GGG 0.599177 2.2:+18022230 None:intergenic
GTAAATTTCAAGTATTGGGG+TGG 0.599707 2.2:-18025377 MS.gene026902:CDS
ACTAAGGATATCATCTCCAT+AGG 0.600675 2.2:+18022191 None:intergenic
GAAAGGTTGAGGTTGAAACA+TGG 0.600936 2.2:+18021907 None:intergenic
AGTTGATCAAAGAAAGCAAG+AGG 0.603484 2.2:-18021237 MS.gene026902:CDS
CCTGAGGGTCACGTATAACA+TGG 0.605375 2.2:-18022271 MS.gene026902:CDS
TCAGAGTTGCACGGAAATGG+TGG 0.607104 2.2:-18021954 MS.gene026902:intron
AGCTCTACTTGTGTACATTG+AGG 0.608262 2.2:-18025258 MS.gene026902:intron
AGGGCCCCGATGGTGATGTG+GGG 0.609240 2.2:+18022736 None:intergenic
AGCAGGAAGTGATAAAATGA+GGG 0.616183 2.2:+18021831 None:intergenic
AACATCCGCGTAATCTTGAA+GGG 0.617142 2.2:+18025059 None:intergenic
CCAGTTGCGGATATCTGTGA+GGG 0.619242 2.2:-18022228 MS.gene026902:CDS
CGAGTAGCGTCTCAGCCGAA+TGG 0.620320 2.2:-18022461 MS.gene026902:CDS
CAAATGAAAATGATCCCGGA+TGG 0.621232 2.2:-18021262 MS.gene026902:CDS
TCACAGATATCCGCAACTGG+GGG 0.623202 2.2:+18022231 None:intergenic
ATTACACGTTCAGAGTTGCA+CGG 0.624817 2.2:-18021963 MS.gene026902:intron
ATCGCATGTGATGTTTCCAT+AGG 0.626313 2.2:+18022143 None:intergenic
ACTCAACTGTTGAAGCATCA+GGG 0.627053 2.2:+18025547 None:intergenic
CATGTTATACGTGACCCTCA+GGG 0.631235 2.2:+18022272 None:intergenic
GAAGTGATAAAATGAGGGCG+AGG 0.644408 2.2:+18021836 None:intergenic
CCCAGTTGCGGATATCTGTG+AGG 0.648176 2.2:-18022229 MS.gene026902:CDS
CACAGATATCCGCAACTGGG+GGG 0.655013 2.2:+18022232 None:intergenic
ATACTATCGAAGTAGAGGAG+TGG 0.659406 2.2:+18022700 None:intergenic
ACCCAAAGAGACAAGTATTG+GGG 0.666185 2.2:+18025340 None:intergenic
ATAAGTTGAAAGAGTCCCTG+AGG 0.681664 2.2:-18022287 MS.gene026902:CDS
TGGTGGTAACAAAGAAACAC+AGG 0.682753 2.2:+18025576 None:intergenic
TAAGTTGAAAGAGTCCCTGA+GGG 0.701964 2.2:-18022286 MS.gene026902:CDS
ATCCTTAGTAGGATATACGG+AGG 0.710424 2.2:-18022177 MS.gene026902:CDS
GCAGGCCCTTCAAGATTACG+CGG 0.737103 2.2:-18025064 MS.gene026902:CDS
ATATCCCCACATCACCATCG+GGG 0.767234 2.2:-18022740 MS.gene026902:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG - chr2.2:18022299-18022318 MS.gene026902:CDS 0.0%
!! TATATATATATATATATATA+TGG + chr2.2:18022318-18022299 None:intergenic 0.0%
!! AAATTCAACGTTAAAAATTA+TGG + chr2.2:18022021-18022040 None:intergenic 15.0%
!! ATTATTTACTCTTTCATATA+AGG + chr2.2:18024775-18024794 None:intergenic 15.0%
!! TTTAAAAGTTTAAACATAGA+AGG + chr2.2:18021919-18021938 None:intergenic 15.0%
!! TTTCAAAAACATAATTAAGA+TGG - chr2.2:18024235-18024254 MS.gene026902:intron 15.0%
!!! AATTGAAAATTTGTTTTTAC+TGG + chr2.2:18024402-18024421 None:intergenic 15.0%
!!! ATATATATGGTGTATTTTTT+TGG - chr2.2:18022406-18022425 MS.gene026902:intron 15.0%
!!! CAATGTTTTAAAATAAATTG+TGG - chr2.2:18025225-18025244 MS.gene026902:intron 15.0%
!!! TTAACAAATGTTTATTTTTC+AGG - chr2.2:18025493-18025512 MS.gene026902:CDS 15.0%
!!! TTGTTTCTAAATCAATTTAT+TGG - chr2.2:18024259-18024278 MS.gene026902:intron 15.0%
!! ACAAATTCATATTACATTCT+TGG - chr2.2:18024308-18024327 MS.gene026902:intron 20.0%
!! ACCAAGATGAATTTATTTAT+TGG + chr2.2:18025195-18025214 None:intergenic 20.0%
!! ATAAAAAGAGAAACATGATT+TGG + chr2.2:18021852-18021871 None:intergenic 20.0%
!! ATAAACAGTAGTTGAATAAA+AGG + chr2.2:18022842-18022861 None:intergenic 20.0%
!! ATAGAAGGAGTAAAAAAAAA+TGG + chr2.2:18021904-18021923 None:intergenic 20.0%
!! ATATCTTCAATACTTGTATA+TGG - chr2.2:18023975-18023994 MS.gene026902:intron 20.0%
!! ATGTAAACCAATTAATCAAA+TGG - chr2.2:18025458-18025477 MS.gene026902:CDS 20.0%
!! TAAAATGATAAAAATCAGCA+AGG + chr2.2:18025431-18025450 None:intergenic 20.0%
!! TAAACAGTAGTTGAATAAAA+GGG + chr2.2:18022841-18022860 None:intergenic 20.0%
!! TACATAACCATTTGATTAAT+TGG + chr2.2:18025468-18025487 None:intergenic 20.0%
!! TCCAATAAATAAATTCATCT+TGG - chr2.2:18025191-18025210 MS.gene026902:intron 20.0%
!! TTGGTTCAATATTTAAAGAA+AGG + chr2.2:18022216-18022235 None:intergenic 20.0%
!!! ATCTTCTAGTTGTATAATTT+TGG - chr2.2:18022162-18022181 MS.gene026902:CDS 20.0%
!!! ATGATTATATCTTTCTAGAA+TGG + chr2.2:18022569-18022588 None:intergenic 20.0%
!!! ATGTTGTAAATTTCAAGTAT+TGG - chr2.2:18021422-18021441 MS.gene026902:intron 20.0%
!!! CTTTACAGTTTTCTATTAAT+AGG + chr2.2:18022866-18022885 None:intergenic 20.0%
!!! TACAACATATCTTTGTTTAA+AGG + chr2.2:18021410-18021429 None:intergenic 20.0%
!!! TGTTGTAAATTTCAAGTATT+GGG - chr2.2:18021423-18021442 MS.gene026902:intron 20.0%
!!! TTTAGTAGTATAACGTTTTA+TGG + chr2.2:18022746-18022765 None:intergenic 20.0%
! AAAGTCTTCATTGAAATTGA+GGG + chr2.2:18021326-18021345 None:intergenic 25.0%
! ACAATTGATCTATATAGAGT+AGG - chr2.2:18023853-18023872 MS.gene026902:intron 25.0%
! ACTCTATATAGATCAATTGT+GGG + chr2.2:18023853-18023872 None:intergenic 25.0%
! AGGTATCTTAAGATATGTTT+GGG - chr2.2:18023732-18023751 MS.gene026902:intron 25.0%
! ATTAGAGAAAATAATGTTGC+TGG + chr2.2:18025128-18025147 None:intergenic 25.0%
! ATTGATGCAAAGGAATTTAA+CGG - chr2.2:18024714-18024733 MS.gene026902:intron 25.0%
! ATTTGCAGTATTAAACTTGA+TGG - chr2.2:18022245-18022264 MS.gene026902:CDS 25.0%
! CATATCTTAAGATACCTTAA+AGG + chr2.2:18023729-18023748 None:intergenic 25.0%
! CTAGTTCAATCAAAACAAAA+GGG + chr2.2:18024433-18024452 None:intergenic 25.0%
! GTTCAATATTTAAAGAAAGG+TGG + chr2.2:18022213-18022232 None:intergenic 25.0%
! TACTCTATATAGATCAATTG+TGG + chr2.2:18023854-18023873 None:intergenic 25.0%
! TTTCAGTTAGATAGTTGAAA+TGG + chr2.2:18021378-18021397 None:intergenic 25.0%
!! AAGGTATCTTAAGATATGTT+TGG - chr2.2:18023731-18023750 MS.gene026902:intron 25.0%
!! AATACTTTATTTGTGCTGTA+GGG - chr2.2:18023435-18023454 MS.gene026902:intron 25.0%
!! AGCAACATTATTTTCTCTAA+TGG - chr2.2:18025127-18025146 MS.gene026902:CDS 25.0%
!! ATATAAAGTTGGTTCTCAAA+AGG - chr2.2:18025098-18025117 MS.gene026902:CDS 25.0%
!! CTTAATTTTCTTGTTAGCAT+CGG - chr2.2:18021640-18021659 MS.gene026902:intron 25.0%
!! GCAACATTATTTTCTCTAAT+GGG - chr2.2:18025128-18025147 MS.gene026902:CDS 25.0%
!! GTTGTAAATTTCAAGTATTG+GGG - chr2.2:18021424-18021443 MS.gene026902:intron 25.0%
!!! GCTTTTATCAATTTGATGAT+TGG + chr2.2:18022446-18022465 None:intergenic 25.0%
!!! TCTTTGTTTAAAGGTTTTAG+AGG + chr2.2:18021401-18021420 None:intergenic 25.0%
AAATCAATTTATTGGTGTGC+AGG - chr2.2:18024267-18024286 MS.gene026902:intron 30.0%
AATGCTTCCCTTGATTTAAA+TGG + chr2.2:18021684-18021703 None:intergenic 30.0%
CAACAACTTAAAATTTCAGC+AGG - chr2.2:18022651-18022670 MS.gene026902:intron 30.0%
CCTAGTTCAATCAAAACAAA+AGG + chr2.2:18024434-18024453 None:intergenic 30.0%
GAAAGTCTTCATTGAAATTG+AGG + chr2.2:18021327-18021346 None:intergenic 30.0%
GATATCCTTAGTAGGATATA+CGG - chr2.2:18024624-18024643 MS.gene026902:intron 30.0%
GGATGTTCTGATTCATTTAA+AGG - chr2.2:18021761-18021780 MS.gene026902:intron 30.0%
GGTATCTTAAGATATGTTTG+GGG - chr2.2:18023733-18023752 MS.gene026902:intron 30.0%
GTATCTTAAGATATGTTTGG+GGG - chr2.2:18023734-18023753 MS.gene026902:intron 30.0%
GTCTTTCTAATGTATGTATC+AGG + chr2.2:18022510-18022529 None:intergenic 30.0%
GTTATACTACTAAAACCATC+CGG - chr2.2:18022752-18022771 MS.gene026902:CDS 30.0%
TAAAGAGAGATAGGTATGAA+AGG - chr2.2:18023669-18023688 MS.gene026902:intron 30.0%
TAATTGCCAGGATATAAAGT+TGG - chr2.2:18025087-18025106 MS.gene026902:CDS 30.0%
TACTGCAAATGCAAAATAGT+TGG + chr2.2:18022235-18022254 None:intergenic 30.0%
TCACTATCAGTGTATTTATC+TGG + chr2.2:18024693-18024712 None:intergenic 30.0%
TGATCAGAATGATCACAATA+GGG + chr2.2:18023132-18023151 None:intergenic 30.0%
TGTAAAGACTAGACAAGTAT+TGG - chr2.2:18022536-18022555 MS.gene026902:intron 30.0%
! ACATCAAAGTATGCATTTTC+TGG + chr2.2:18024134-18024153 None:intergenic 30.0%
! AGCAAATGCATCTTTTCTAA+GGG - chr2.2:18022789-18022808 MS.gene026902:intron 30.0%
! AGTATAACGTTTTATGGCAT+TGG + chr2.2:18022740-18022759 None:intergenic 30.0%
! GAATACTTTATTTGTGCTGT+AGG - chr2.2:18023434-18023453 MS.gene026902:intron 30.0%
! TAGCAAATGCATCTTTTCTA+AGG - chr2.2:18022788-18022807 MS.gene026902:intron 30.0%
! TGATAGTGATATTGATGCAA+AGG - chr2.2:18024704-18024723 MS.gene026902:intron 30.0%
! TGATTTATCAGATAGTCTTG+TGG - chr2.2:18025273-18025292 MS.gene026902:CDS 30.0%
!! AATCAGTGCCATTTAAATCA+AGG - chr2.2:18021673-18021692 MS.gene026902:intron 30.0%
!! AGAAAAGATGCATTTGCTAT+AGG + chr2.2:18022787-18022806 None:intergenic 30.0%
!! ATCAGTGCCATTTAAATCAA+GGG - chr2.2:18021674-18021693 MS.gene026902:intron 30.0%
!! TGGTCATTTGTAGTTTTACT+TGG - chr2.2:18022265-18022284 MS.gene026902:CDS 30.0%
!!! CCTTTTGTTTTGATTGAACT+AGG - chr2.2:18024431-18024450 MS.gene026902:intron 30.0%
!!! CTGCTGAAATTTTAAGTTGT+TGG + chr2.2:18022653-18022672 None:intergenic 30.0%
AAGTGAAATCGAATATTCGC+CGG - chr2.2:18021492-18021511 MS.gene026902:intron 35.0%
ACACTTCACTGACAAAAAAG+TGG + chr2.2:18022815-18022834 None:intergenic 35.0%
ACTAAGGATATCATCTCCAT+AGG + chr2.2:18024616-18024635 None:intergenic 35.0%
AGCAGGAAGTGATAAAATGA+GGG + chr2.2:18024976-18024995 None:intergenic 35.0%
AGGTAGAGATAATCAAGAGA+TGG - chr2.2:18025587-18025606 MS.gene026902:CDS 35.0%
AGGTCTGGTAACATATTGAA+GGG - chr2.2:18023825-18023844 MS.gene026902:intron 35.0%
AGTTGAGTGTATTGTCAGAA+TGG - chr2.2:18021272-18021291 MS.gene026902:CDS 35.0%
AGTTGATCAAAGAAAGCAAG+AGG - chr2.2:18025567-18025586 MS.gene026902:CDS 35.0%
AGTTTGATTCCAGAAACCAT+AGG - chr2.2:18023907-18023926 MS.gene026902:intron 35.0%
ATGCAAAGGAATTTAACGGT+TGG - chr2.2:18024718-18024737 MS.gene026902:intron 35.0%
ATGGAGATGATATCCTTAGT+AGG - chr2.2:18024616-18024635 MS.gene026902:intron 35.0%
ATTCAAGAACACAAGCACAT+TGG - chr2.2:18021701-18021720 MS.gene026902:intron 35.0%
ATTCTGTTAGACAGTTACAG+AGG - chr2.2:18023085-18023104 MS.gene026902:intron 35.0%
CATTGAAATTGAGGGTTTCA+GGG + chr2.2:18021318-18021337 None:intergenic 35.0%
CTTAGAATGGAAAGACCATT+CGG + chr2.2:18024361-18024380 None:intergenic 35.0%
CTTGCAAATGAAAATGATCC+CGG - chr2.2:18025538-18025557 MS.gene026902:CDS 35.0%
GCATAGTTCTTGAAGTTGAA+AGG + chr2.2:18024917-18024936 None:intergenic 35.0%
GCATTATCCGTCATAAAATC+CGG + chr2.2:18021514-18021533 None:intergenic 35.0%
GGAATCAAACTTTCCAAAGA+AGG + chr2.2:18023898-18023917 None:intergenic 35.0%
GTGATCAGAATGATCACAAT+AGG + chr2.2:18023133-18023152 None:intergenic 35.0%
GTTCAATCAAAACAAAAGGG+AGG + chr2.2:18024430-18024449 None:intergenic 35.0%
TAGCAGGAAGTGATAAAATG+AGG + chr2.2:18024977-18024996 None:intergenic 35.0%
TATAGAGTAGGATCAGAGAA+TGG - chr2.2:18023865-18023884 MS.gene026902:intron 35.0%
TCATTGAAATTGAGGGTTTC+AGG + chr2.2:18021319-18021338 None:intergenic 35.0%
TCTTTGATCAACTAACCATC+CGG + chr2.2:18025560-18025579 None:intergenic 35.0%
TGAGAACCAACTTTATATCC+TGG + chr2.2:18025096-18025115 None:intergenic 35.0%
TGCAAAGGAATTTAACGGTT+GGG - chr2.2:18024719-18024738 MS.gene026902:intron 35.0%
TGTGGCTGTTACATATTTCA+GGG - chr2.2:18025243-18025262 MS.gene026902:intron 35.0%
TTATTGACAGCAAAACTGTC+TGG - chr2.2:18023800-18023819 MS.gene026902:intron 35.0%
TTCAAGAACACAAGCACATT+GGG - chr2.2:18021702-18021721 MS.gene026902:intron 35.0%
TTCTGTTAGACAGTTACAGA+GGG - chr2.2:18023086-18023105 MS.gene026902:intron 35.0%
TTCTTGAAGTTGAAAGGTTG+AGG + chr2.2:18024911-18024930 None:intergenic 35.0%
TTGTGGCTGTTACATATTTC+AGG - chr2.2:18025242-18025261 MS.gene026902:intron 35.0%
! AACTTATCAGCCTTTTCCAA+TGG + chr2.2:18024504-18024523 None:intergenic 35.0%
! ATATAGTTAGCTTGAAGCGT+AGG - chr2.2:18023220-18023239 MS.gene026902:intron 35.0%
! ATATTCGCCGGATTTTATGA+CGG - chr2.2:18021504-18021523 MS.gene026902:intron 35.0%
! CATTTTATCACTTCCTGCTA+CGG - chr2.2:18024977-18024996 MS.gene026902:intron 35.0%
! TTTGATGATTGGCAGATTAG+AGG + chr2.2:18022435-18022454 None:intergenic 35.0%
!! CTTGAATTTCTGGCTTAGAA+TGG + chr2.2:18024374-18024393 None:intergenic 35.0%
!! GTAAATTTCAAGTATTGGGG+TGG - chr2.2:18021427-18021446 MS.gene026902:intron 35.0%
AAATATCCCCACATCACCAT+CGG - chr2.2:18024062-18024081 MS.gene026902:intron 40.0%
AACATCCGCGTAATCTTGAA+GGG + chr2.2:18021748-18021767 None:intergenic 40.0%
AACCCACAAAAGTTCAGAAG+TGG - chr2.2:18023485-18023504 MS.gene026902:intron 40.0%
AAGTAGAGCTTTCAAGGAAG+CGG + chr2.2:18021536-18021555 None:intergenic 40.0%
ACATGCATACCATTGATCGT+CGG + chr2.2:18025304-18025323 None:intergenic 40.0%
ACTGGCAAGTCTTGAATTTC+TGG + chr2.2:18024384-18024403 None:intergenic 40.0%
AGCCAATGCTTAATTTCCCT+GGG - chr2.2:18022679-18022698 MS.gene026902:CDS 40.0%
AGCTCTACTTGTGTACATTG+AGG - chr2.2:18021546-18021565 MS.gene026902:intron 40.0%
AGGATTATGAGCAAGAGCAA+TGG - chr2.2:18023395-18023414 MS.gene026902:intron 40.0%
AGGTCTTCAAATCTAGATGG+AGG - chr2.2:18023240-18023259 MS.gene026902:intron 40.0%
ATACTATCGAAGTAGAGGAG+TGG + chr2.2:18024107-18024126 None:intergenic 40.0%
ATCCTTAGTAGGATATACGG+AGG - chr2.2:18024627-18024646 MS.gene026902:intron 40.0%
ATCGCATGTGATGTTTCCAT+AGG + chr2.2:18024664-18024683 None:intergenic 40.0%
ATGCCAATTTATGACCACTC+TGG + chr2.2:18023777-18023796 None:intergenic 40.0%
ATTACACGTTCAGAGTTGCA+CGG - chr2.2:18024841-18024860 MS.gene026902:intron 40.0%
ATTCCAGAAACCATAGGAGA+GGG - chr2.2:18023913-18023932 MS.gene026902:intron 40.0%
ATTTGCAAGCATGAGATCCT+GGG + chr2.2:18025527-18025546 None:intergenic 40.0%
CAAATGAAAATGATCCCGGA+TGG - chr2.2:18025542-18025561 MS.gene026902:CDS 40.0%
CACCCAAAGAGACAAGTATT+GGG + chr2.2:18021468-18021487 None:intergenic 40.0%
CAGGTCTGGTAACATATTGA+AGG - chr2.2:18023824-18023843 MS.gene026902:intron 40.0%
CAGTAGGCATAAAGAGAGAT+AGG - chr2.2:18023660-18023679 MS.gene026902:intron 40.0%
CATCATTGTGACTAATTGCC+AGG - chr2.2:18025075-18025094 MS.gene026902:CDS 40.0%
CATCCAGAGTGGTCATAAAT+TGG - chr2.2:18023771-18023790 MS.gene026902:intron 40.0%
CCATAACATCATTTCCTGGT+GGG + chr2.2:18023574-18023593 None:intergenic 40.0%
CGTAGGTCTTCAAATCTAGA+TGG - chr2.2:18023237-18023256 MS.gene026902:intron 40.0%
CTAAAAGATCCTTGGAGTAG+TGG - chr2.2:18025151-18025170 MS.gene026902:intron 40.0%
CTTTGATCAACTAACCATCC+GGG + chr2.2:18025559-18025578 None:intergenic 40.0%
GAAAGGTTGAGGTTGAAACA+TGG + chr2.2:18024900-18024919 None:intergenic 40.0%
GAAGAATTCCCTATGCCAAT+GGG + chr2.2:18024878-18024897 None:intergenic 40.0%
GAATGGAGAAAAGCCTTCTT+TGG - chr2.2:18023882-18023901 MS.gene026902:intron 40.0%
GAGCGATGCAAGAAAGATTA+TGG - chr2.2:18024938-18024957 MS.gene026902:intron 40.0%
GATCAATGGTATGCATGTCT+TGG - chr2.2:18025306-18025325 MS.gene026902:CDS 40.0%
GCAAAGGAATTTAACGGTTG+GGG - chr2.2:18024720-18024739 MS.gene026902:intron 40.0%
GGTCATTCAGAAGCAGTTAT+TGG + chr2.2:18023319-18023338 None:intergenic 40.0%
GTACACAAGTAGAGCTTTCA+AGG + chr2.2:18021542-18021561 None:intergenic 40.0%
GTCAAGGACTGTGATCATAT+GGG + chr2.2:18022718-18022737 None:intergenic 40.0%
GTGAGCTAATTATGCAGCAA+AGG - chr2.2:18022619-18022638 MS.gene026902:intron 40.0%
GTGTGATACTATCGAAGTAG+AGG + chr2.2:18024112-18024131 None:intergenic 40.0%
TACCTCCGTATATCCTACTA+AGG + chr2.2:18024632-18024651 None:intergenic 40.0%
TAGCCAATGCTTAATTTCCC+TGG - chr2.2:18022678-18022697 MS.gene026902:CDS 40.0%
TCAAGGACTGTGATCATATG+GGG + chr2.2:18022717-18022736 None:intergenic 40.0%
TGGTATGCATGTCTTGGTAT+TGG - chr2.2:18025312-18025331 MS.gene026902:CDS 40.0%
TGGTGGTAACAAAGAAACAC+AGG + chr2.2:18021231-18021250 None:intergenic 40.0%
TTATTGGTCACTCACATTCC+AGG + chr2.2:18023303-18023322 None:intergenic 40.0%
TTCTTGCAGTCCATTGGAAA+AGG - chr2.2:18024491-18024510 MS.gene026902:intron 40.0%
TTGCTATAGGAGATAGTTGC+CGG + chr2.2:18022774-18022793 None:intergenic 40.0%
TTGGTACAAGCATAGAGTAC+AGG - chr2.2:18023375-18023394 MS.gene026902:intron 40.0%
! AATTGAGGGTTTCAGGGTTT+TGG + chr2.2:18021312-18021331 None:intergenic 40.0%
! ACCCAAAGAGACAAGTATTG+GGG + chr2.2:18021467-18021486 None:intergenic 40.0%
! ACTCAACTGTTGAAGCATCA+GGG + chr2.2:18021260-18021279 None:intergenic 40.0%
! ATAAGTTGAAAGAGTCCCTG+AGG - chr2.2:18024517-18024536 MS.gene026902:intron 40.0%
! CTCAAGTGATAGTGCCTTTA+AGG - chr2.2:18023712-18023731 MS.gene026902:intron 40.0%
! GAGATAGGTATGAAAGGCAT+TGG - chr2.2:18023675-18023694 MS.gene026902:intron 40.0%
! TAAGTTGAAAGAGTCCCTGA+GGG - chr2.2:18024518-18024537 MS.gene026902:intron 40.0%
!! CAATGGACTGCAAGAAGTAT+CGG + chr2.2:18024487-18024506 None:intergenic 40.0%
!! CTAATGGGCTAAAAGATCCT+TGG - chr2.2:18025143-18025162 MS.gene026902:CDS 40.0%
!! CTTAAAGGCACTATCACTTG+AGG + chr2.2:18023714-18023733 None:intergenic 40.0%
!! GATATCTGTGAGGGCATTAA+TGG - chr2.2:18024585-18024604 MS.gene026902:intron 40.0%
!! TAGGATATACGGAGGTATTG+TGG - chr2.2:18024635-18024654 MS.gene026902:intron 40.0%
!! TCTTGTTAGCATCGGTACTA+CGG - chr2.2:18021648-18021667 MS.gene026902:intron 40.0%
!! TGCCACTTCTGAACTTTTGT+GGG + chr2.2:18023490-18023509 None:intergenic 40.0%
!! TTGCCACTTCTGAACTTTTG+TGG + chr2.2:18023491-18023510 None:intergenic 40.0%
!!! ACGTTTTATGGCATTGGTCA+AGG + chr2.2:18022734-18022753 None:intergenic 40.0%
!!! TTTTTCAGGAACTCATACCC+AGG - chr2.2:18025507-18025526 MS.gene026902:CDS 40.0%
AAAGATCCTTGGAGTAGTGG+AGG - chr2.2:18025154-18025173 MS.gene026902:intron 45.0%
AATATCCCCACATCACCATC+GGG - chr2.2:18024063-18024082 MS.gene026902:intron 45.0%
ACATGCAGATATCATGACCG+AGG + chr2.2:18023271-18023290 None:intergenic 45.0%
AGGAAATGATGTTATGGCCC+AGG - chr2.2:18023577-18023596 MS.gene026902:intron 45.0%
AGGAATTTAACGGTTGGGGT+TGG - chr2.2:18024724-18024743 MS.gene026902:intron 45.0%
ATACAATTACCCCCCAGTTG+CGG - chr2.2:18024563-18024582 MS.gene026902:intron 45.0%
CAACTTTCAGACAGCAATCC+CGG - chr2.2:18023019-18023038 MS.gene026902:intron 45.0%
CACCCAGGGAAATTAAGCAT+TGG + chr2.2:18022684-18022703 None:intergenic 45.0%
CAGGTCTAATTCCATGTGCT+TGG - chr2.2:18023356-18023375 MS.gene026902:intron 45.0%
CAGTCTCTTCTTACTGAGCT+AGG + chr2.2:18023465-18023484 None:intergenic 45.0%
CATACCATTGATCGTCGGAA+GGG + chr2.2:18025299-18025318 None:intergenic 45.0%
CATGTTATACGTGACCCTCA+GGG + chr2.2:18024535-18024554 None:intergenic 45.0%
CATTTGCAAGCATGAGATCC+TGG + chr2.2:18025528-18025547 None:intergenic 45.0%
CCAATACTTGTCTCTTTGGG+TGG - chr2.2:18021466-18021485 MS.gene026902:intron 45.0%
CCACCCAAAGAGACAAGTAT+TGG + chr2.2:18021469-18021488 None:intergenic 45.0%
CCCACCAGGAAATGATGTTA+TGG - chr2.2:18023571-18023590 MS.gene026902:intron 45.0%
CCTGTTCTTTGTCAGAGAGA+AGG + chr2.2:18023340-18023359 None:intergenic 45.0%
CCTTCTCTCTGACAAAGAAC+AGG - chr2.2:18023337-18023356 MS.gene026902:intron 45.0%
CGATACTTCTTGCAGTCCAT+TGG - chr2.2:18024485-18024504 MS.gene026902:intron 45.0%
CTATGCTTGTACCAAGCACA+TGG + chr2.2:18023370-18023389 None:intergenic 45.0%
GAACATCCGCGTAATCTTGA+AGG + chr2.2:18021749-18021768 None:intergenic 45.0%
GAAGTGATAAAATGAGGGCG+AGG + chr2.2:18024971-18024990 None:intergenic 45.0%
GATTCCAGAAACCATAGGAG+AGG - chr2.2:18023912-18023931 MS.gene026902:intron 45.0%
GCCATAACATCATTTCCTGG+TGG + chr2.2:18023575-18023594 None:intergenic 45.0%
GCCCCAATACTTGTCTCTTT+GGG - chr2.2:18021463-18021482 MS.gene026902:intron 45.0%
GGAAGAATTCCCTATGCCAA+TGG + chr2.2:18024879-18024898 None:intergenic 45.0%
GGTCAAGGACTGTGATCATA+TGG + chr2.2:18022719-18022738 None:intergenic 45.0%
TAAATCTCTCCCCTCTCCTA+TGG + chr2.2:18023926-18023945 None:intergenic 45.0%
TATAGGAGATAGTTGCCGGA+TGG + chr2.2:18022770-18022789 None:intergenic 45.0%
TATATGCGATTGCTCACTCC+TGG + chr2.2:18023205-18023224 None:intergenic 45.0%
TATTGCCAGCTCATACAGTG+AGG - chr2.2:18023052-18023071 MS.gene026902:intron 45.0%
TGATATCTGCATGTCAGAGC+TGG - chr2.2:18023277-18023296 MS.gene026902:intron 45.0%
TGCCCCAATACTTGTCTCTT+TGG - chr2.2:18021462-18021481 MS.gene026902:intron 45.0%
TGGGCCATAACATCATTTCC+TGG + chr2.2:18023578-18023597 None:intergenic 45.0%
TTCCAGAAACCATAGGAGAG+GGG - chr2.2:18023914-18023933 MS.gene026902:intron 45.0%
TTTATCACTTCCTGCTACGG+AGG - chr2.2:18024980-18024999 MS.gene026902:intron 45.0%
! AAGATCCTTGGAGTAGTGGA+GGG - chr2.2:18025155-18025174 MS.gene026902:intron 45.0%
! ACTATGCAGTGCTTGCTACA+TGG - chr2.2:18024030-18024049 MS.gene026902:intron 45.0%
! CACTCAACTGTTGAAGCATC+AGG + chr2.2:18021261-18021280 None:intergenic 45.0%
! CAGTGCTTGCTACATGGTTT+CGG - chr2.2:18024036-18024055 MS.gene026902:intron 45.0%
! CTGTTGAAGCATCAGGGATT+TGG + chr2.2:18021254-18021273 None:intergenic 45.0%
! TGCCTACTGTGATGCTGATT+CGG + chr2.2:18023649-18023668 None:intergenic 45.0%
! TTGAAGCATCAGGGATTTGG+TGG + chr2.2:18021251-18021270 None:intergenic 45.0%
!! AAGGCATTGGTTGCAGATCA+AGG - chr2.2:18023688-18023707 MS.gene026902:intron 45.0%
AACTGCCTCACTGTATGAGC+TGG + chr2.2:18023060-18023079 None:intergenic 50.0%
AAGTCCCCGGTGATTGTGAT+TGG - chr2.2:18021801-18021820 MS.gene026902:intron 50.0%
ACTCCTGGTTAAGCTTGCAG+GGG + chr2.2:18023190-18023209 None:intergenic 50.0%
AGTCCCCGGTGATTGTGATT+GGG - chr2.2:18021802-18021821 MS.gene026902:intron 50.0%
ATATCCCCACATCACCATCG+GGG - chr2.2:18024064-18024083 MS.gene026902:intron 50.0%
ATCCCCCAATCACAATCACC+GGG + chr2.2:18021809-18021828 None:intergenic 50.0%
CAAAACTGTCTGGTCAGGTC+TGG - chr2.2:18023810-18023829 MS.gene026902:intron 50.0%
CACTCCTGGTTAAGCTTGCA+GGG + chr2.2:18023191-18023210 None:intergenic 50.0%
CCAGTTGCGGATATCTGTGA+GGG - chr2.2:18024576-18024595 MS.gene026902:intron 50.0%
CCATGTTATACGTGACCCTC+AGG + chr2.2:18024536-18024555 None:intergenic 50.0%
CCTCACAGATATCCGCAACT+GGG + chr2.2:18024578-18024597 None:intergenic 50.0%
CCTGAGGGTCACGTATAACA+TGG - chr2.2:18024533-18024552 MS.gene026902:intron 50.0%
CGTTCAGAGTTGCACGGAAA+TGG - chr2.2:18024847-18024866 MS.gene026902:intron 50.0%
CTCACAGATATCCGCAACTG+GGG + chr2.2:18024577-18024596 None:intergenic 50.0%
CTGGCAATAAACTGTCTCGC+CGG + chr2.2:18023041-18023060 None:intergenic 50.0%
GAAAACACAGGCACCTGAGT+TGG - chr2.2:18023599-18023618 MS.gene026902:intron 50.0%
GACAGCAAAACTGTCTGGTC+AGG - chr2.2:18023805-18023824 MS.gene026902:intron 50.0%
GAGTTGGACCTTCTGTCATC+AGG - chr2.2:18023615-18023634 MS.gene026902:intron 50.0%
GATCCCCCAATCACAATCAC+CGG + chr2.2:18021810-18021829 None:intergenic 50.0%
GATGACAGAAGGTCCAACTC+AGG + chr2.2:18023615-18023634 None:intergenic 50.0%
GCATACCATTGATCGTCGGA+AGG + chr2.2:18025300-18025319 None:intergenic 50.0%
GCTCACAACCTGATGACAGA+AGG + chr2.2:18023626-18023645 None:intergenic 50.0%
GGCATTAATGGAGCTGCCTA+TGG - chr2.2:18024597-18024616 MS.gene026902:intron 50.0%
GGGGTCTAATTACACACCCA+GGG + chr2.2:18022698-18022717 None:intergenic 50.0%
GTTATGGCCCAGGAAAACAC+AGG - chr2.2:18023587-18023606 MS.gene026902:intron 50.0%
GTTTACCCTCCACTACTCCA+AGG + chr2.2:18025163-18025182 None:intergenic 50.0%
TCACAGATATCCGCAACTGG+GGG + chr2.2:18024576-18024595 None:intergenic 50.0%
TCACTCCTGGTTAAGCTTGC+AGG + chr2.2:18023192-18023211 None:intergenic 50.0%
TCAGAGTTGCACGGAAATGG+TGG - chr2.2:18024850-18024869 MS.gene026902:intron 50.0%
TCTAGATGGAGGAAGAGCCT+CGG - chr2.2:18023251-18023270 MS.gene026902:intron 50.0%
TGGCAATAAACTGTCTCGCC+GGG + chr2.2:18023040-18023059 None:intergenic 50.0%
TGGGGTCTAATTACACACCC+AGG + chr2.2:18022699-18022718 None:intergenic 50.0%
! ACATCATTTCCTGGTGGGCA+AGG + chr2.2:18023569-18023588 None:intergenic 50.0%
! ATTTAACGGTTGGGGTTGGC+AGG - chr2.2:18024728-18024747 MS.gene026902:intron 50.0%
! TCAGGTGCCTGTGTTTTCCT+GGG + chr2.2:18023597-18023616 None:intergenic 50.0%
!! AAGCATCAGGGATTTGGTGG+TGG + chr2.2:18021248-18021267 None:intergenic 50.0%
!! GCCTACTGTGATGCTGATTC+GGG + chr2.2:18023648-18023667 None:intergenic 50.0%
ACGTACATGTCCTCCGTAGC+AGG + chr2.2:18024993-18025012 None:intergenic 55.0%
AGACCAGTGAGCATCCAGAG+TGG - chr2.2:18023760-18023779 MS.gene026902:intron 55.0%
ATTAGACGCGCAGAAGTCCC+CGG - chr2.2:18021788-18021807 MS.gene026902:intron 55.0%
CACAGATATCCGCAACTGGG+GGG + chr2.2:18024575-18024594 None:intergenic 55.0%
CATTCGGCTGAGACGCTACT+CGG + chr2.2:18024345-18024364 None:intergenic 55.0%
CCCAGTTGCGGATATCTGTG+AGG - chr2.2:18024575-18024594 MS.gene026902:intron 55.0%
CCCTCACAGATATCCGCAAC+TGG + chr2.2:18024579-18024598 None:intergenic 55.0%
CTCCCCTCTCCTATGGTTTC+TGG + chr2.2:18023919-18023938 None:intergenic 55.0%
CTCCTGGTTAAGCTTGCAGG+GGG + chr2.2:18023189-18023208 None:intergenic 55.0%
GCAGGCCCTTCAAGATTACG+CGG - chr2.2:18021740-18021759 MS.gene026902:intron 55.0%
GCCCGAATCAGCATCACAGT+AGG - chr2.2:18023644-18023663 MS.gene026902:intron 55.0%
GTCCCCGGTGATTGTGATTG+GGG - chr2.2:18021803-18021822 MS.gene026902:intron 55.0%
GTGATTGGGGGATCATACGC+TGG - chr2.2:18021816-18021835 MS.gene026902:intron 55.0%
TCCCCCAATCACAATCACCG+GGG + chr2.2:18021808-18021827 None:intergenic 55.0%
TCCCCGGTGATTGTGATTGG+GGG - chr2.2:18021804-18021823 MS.gene026902:intron 55.0%
TCCTGGTTAAGCTTGCAGGG+GGG + chr2.2:18023188-18023207 None:intergenic 55.0%
TGACCACTCTGGATGCTCAC+TGG + chr2.2:18023766-18023785 None:intergenic 55.0%
! CTCAGGTGCCTGTGTTTTCC+TGG + chr2.2:18023598-18023617 None:intergenic 55.0%
!! GGAGGTATTGTGGCTGCCTA+TGG - chr2.2:18024645-18024664 MS.gene026902:intron 55.0%
AAGCTGCTTCCTTGCCCACC+AGG - chr2.2:18023557-18023576 MS.gene026902:intron 60.0%
ACCCCCCTGCAAGCTTAACC+AGG - chr2.2:18023184-18023203 MS.gene026902:intron 60.0%
CGAGTAGCGTCTCAGCCGAA+TGG - chr2.2:18024343-18024362 MS.gene026902:intron 60.0%
GGGCTACTTAAACGCAGCGC+AGG - chr2.2:18021722-18021741 MS.gene026902:intron 60.0%
GTAGAGGAGTGGAGCTGACG+AGG + chr2.2:18024096-18024115 None:intergenic 60.0%
GTGGCCCTTCCGACGATCAA+TGG - chr2.2:18025292-18025311 MS.gene026902:CDS 60.0%
TCTGCATGTCAGAGCTGGCC+TGG - chr2.2:18023282-18023301 MS.gene026902:intron 60.0%
! ACGGAAATGGTGGCGCCCAT+TGG - chr2.2:18024860-18024879 MS.gene026902:intron 60.0%
! ATGGTGGCGCCCATTGGCAT+AGG - chr2.2:18024866-18024885 MS.gene026902:intron 60.0%
! TGGTGGCGCCCATTGGCATA+GGG - chr2.2:18024867-18024886 MS.gene026902:intron 60.0%
GAGTGGAGCTGACGAGGCCA+GGG + chr2.2:18024090-18024109 None:intergenic 65.0%
! AGGGCCCCGATGGTGATGTG+GGG + chr2.2:18024071-18024090 None:intergenic 65.0%
! CAGGGCCCCGATGGTGATGT+GGG + chr2.2:18024072-18024091 None:intergenic 65.0%
CCACATCACCATCGGGGCCC+TGG - chr2.2:18024070-18024089 MS.gene026902:intron 70.0%
GGAGTGGAGCTGACGAGGCC+AGG + chr2.2:18024091-18024110 None:intergenic 70.0%
! CCAGGGCCCCGATGGTGATG+TGG + chr2.2:18024073-18024092 None:intergenic 70.0%
TGACGAGGCCAGGGCCCCGA+TGG + chr2.2:18024081-18024100 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 18021187 18025639 18021187 ID=MS.gene026902
chr2.2 mRNA 18021187 18025639 18021187 ID=MS.gene026902.t1;Parent=MS.gene026902
chr2.2 exon 18025259 18025639 18025259 ID=MS.gene026902.t1.exon1;Parent=MS.gene026902.t1
chr2.2 CDS 18025259 18025639 18025259 ID=cds.MS.gene026902.t1;Parent=MS.gene026902.t1
chr2.2 exon 18024986 18025169 18024986 ID=MS.gene026902.t1.exon2;Parent=MS.gene026902.t1
chr2.2 CDS 18024986 18025169 18024986 ID=cds.MS.gene026902.t1;Parent=MS.gene026902.t1
chr2.2 exon 18022654 18022787 18022654 ID=MS.gene026902.t1.exon3;Parent=MS.gene026902.t1
chr2.2 CDS 18022654 18022787 18022654 ID=cds.MS.gene026902.t1;Parent=MS.gene026902.t1
chr2.2 exon 18022425 18022537 18022425 ID=MS.gene026902.t1.exon4;Parent=MS.gene026902.t1
chr2.2 CDS 18022425 18022537 18022425 ID=cds.MS.gene026902.t1;Parent=MS.gene026902.t1
chr2.2 exon 18022077 18022326 18022077 ID=MS.gene026902.t1.exon5;Parent=MS.gene026902.t1
chr2.2 CDS 18022077 18022326 18022077 ID=cds.MS.gene026902.t1;Parent=MS.gene026902.t1
chr2.2 exon 18021820 18021972 18021820 ID=MS.gene026902.t1.exon6;Parent=MS.gene026902.t1
chr2.2 CDS 18021820 18021972 18021820 ID=cds.MS.gene026902.t1;Parent=MS.gene026902.t1
chr2.2 exon 18021187 18021297 18021187 ID=MS.gene026902.t1.exon7;Parent=MS.gene026902.t1
chr2.2 CDS 18021187 18021297 18021187 ID=cds.MS.gene026902.t1;Parent=MS.gene026902.t1
Gene Sequence

>MS.gene026902

ATGGAGAAGTTTATATCTTTTAATCTACTCTGCATATTCTTCCTGTGTTTCTTTGTTACCACCACCAAATCCCTGATGCTTCAACAGTTGAGTGTATTGTCAGAATGGAAAACTATCAAGTACCAAAACCCTGAAACCCTCAATTTCAATGAAGACTTTCATACATATTTTTACAAACAAACTTTAGACCATTTCAACTATCTAACTGAAACCTCTAAAACCTTTAAACAAAGATATGTTGTAAATTTCAAGTATTGGGGTGGTGCTAATTCTAGTGCCCCAATACTTGTCTCTTTGGGTGGAGAAAGTGAAATCGAATATTCGCCGGATTTTATGACGGATAATGCCGCTTCCTTGAAAGCTCTACTTGTGTACATTGAGGTAATAAAGACGACTGTTTCTATTAACACTCAATGATCTAAATCAAGTTAGTTTTACAGTTCTGATTATGCTCTTAATTTTCTTGTTAGCATCGGTACTACGGAAAATCAGTGCCATTTAAATCAAGGGAAGCATTCAAGAACACAAGCACATTGGGCTACTTAAACGCAGCGCAGGCCCTTCAAGATTACGCGGATGTTCTGATTCATTTAAAGGCTTCATTAGACGCGCAGAAGTCCCCGGTGATTGTGATTGGGGGATCATACGCTGGAAGTAAGTTTCCAAATCATGTTTCTCTTTTTATTCACTTTTTATCATCTATTTCTGCTTGTTCCATTTTTTTTTACTCCTTCTATGTTTAAACTTTTAAATTATGTTTTCTTTTAATTTTATTTTTCTATTTTGTGTTTCTCTTATTTTTGTTATTAAAATTATGCTGTTATCATCATTCCATAATTTTTAACGTTGAATTTCAATTATGTAGTATTTGAATTCTAATTCTATTTTTTCTTTTTGTTTTTTCTAATTTTTATTTGTAAGTTGCTTTTTCATTTATTTTTCTTGTTCTTTGAATTATACTTTTATTTTAATTATATCTTCTAGTTGTATAATTTTGGTTTATATTTTTCTAATTTATTTTTGCCACCTTTCTTTAAATATTGAACCAACTATTTTGCATTTGCAGTATTAAACTTGATGGTCATTTGTAGTTTTACTTGGCTATGCGTCCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGGTGTATTTTTTTGGTGACCTCTAATCTGCCAATCATCAAATTGATAAAAGCTTAAGTCGTTGTTGCAAACTATTTTTTTTATCAAGATTACTCCTGATACATACATTAGAAAGACATCTTTTGTAAAGACTAGACAAGTATTGGTATTATACCATTCTAGAAAGATATAATCATACAAAGACAAAGTCTAATTGTCTTGATCATGTGAGCTAATTATGCAGCAAAGGACAGTGAACCAACAACTTAAAATTTCAGCAGGTTTGTAGCCAATGCTTAATTTCCCTGGGTGTGTAATTAGACCCCATATGATCACAGTCCTTGACCAATGCCATAAAACGTTATACTACTAAAACCATCCGGCAACTATCTCCTATAGCAAATGCATCTTTTCTAAGGGCCACTTTTTTGTCAGTGAAGTGTTCACCCTTTTATTCAACTACTGTTTATTCCTATTAATAGAAAACTGTAAAGTGATGAATCTAGAGAGCTTCTAGCTTCTCTGAAATAATTGTTTTTGTGTTTTCTGTTAGAATGATTTTCATTGTGCTTGCAAAAGATAGATGAGTCTATTTATAGACATGTGTTTGCTACTCTATCTGACTGACAACTTTCAGACAGCAATCCCGGCGAGACAGTTTATTGCCAGCTCATACAGTGAGGCAGTTACACAATTCTGTTAGACAGTTACAGAGGGAGAGTAATCTAGTGTGATAACCCTATTGTGATCATTCTGATCACAAGCTAATATATGCTACGCTATATCTTCAATACCCCCCTGCAAGCTTAACCAGGAGTGAGCAATCGCATATAGTTAGCTTGAAGCGTAGGTCTTCAAATCTAGATGGAGGAAGAGCCTCGGTCATGATATCTGCATGTCAGAGCTGGCCTGGAATGTGAGTGACCAATAACTGCTTCTGAATGACCTTCTCTCTGACAAAGAACAGGTCTAATTCCATGTGCTTGGTACAAGCATAGAGTACAGGATTATGAGCAAGAGCAATGGTGCTCATATTGTCACAGAATACTTTATTTGTGCTGTAGGGAACACCTAGCTCAGTAAGAAGAGACTGAACCCACAAAAGTTCAGAAGTGGCAAGAGCTAAGCTGCGATACTCAGCTTCTGTGCTTGATCTAGAGATAACAAGCTGCTTCCTTGCCCACCAGGAAATGATGTTATGGCCCAGGAAAACACAGGCACCTGAGTTGGACCTTCTGTCATCAGGTTGTGAGCCCGAATCAGCATCACAGTAGGCATAAAGAGAGATAGGTATGAAAGGCATTGGTTGCAGATCAAGGCCTCAAGTGATAGTGCCTTTAAGGTATCTTAAGATATGTTTGGGGGTGCAGACCAGTGAGCATCCAGAGTGGTCATAAATTGGCATACTTTATTGACAGCAAAACTGTCTGGTCAGGTCTGGTAACATATTGAAGGGCACCCACAATTGATCTATATAGAGTAGGATCAGAGAATGGAGAAAAGCCTTCTTTGGAAAGTTTGATTCCAGAAACCATAGGAGAGGGGAGAGATTTAGCTTCATGCATGATTTTTCTAGTGAGCAAATATCTTCAATACTTGTATATGGTTTTCTCTTAATTAATGTTTATATATTTGTTAACTATGCAGTGCTTGCTACATGGTTTCGGCTGAAATATCCCCACATCACCATCGGGGCCCTGGCCTCGTCAGCTCCACTCCTCTACTTCGATAGTATCACACCAGAAAATGCATACTTTGATGTTATTACACGAGATTTCAAAGTAATTCACGATAGTTTTTTCTTTTTTCATCTTTCATATTATTTGATTTATTATTATTTTTTTTTCAAAAACATAATTAAGATGGCTTGTTTCTAAATCAATTTATTGGTGTGCAGGACACTAGTGAGACATGCTACAAATTCATATTACATTCTTGGTCTGAAATTGACCGAGTAGCGTCTCAGCCGAATGGTCTTTCCATTCTAAGCCAGAAATTCAAGACTTGCCAGTAAAAACAAATTTTCAATTTATTTCCTCCCTTTTGTTTTGATTGAACTAGGATTTTAAGTGCAGTGTTTAATTTACTCAAACCGATACTTCTTGCAGTCCATTGGAAAAGGCTGATAAGTTGAAAGAGTCCCTGAGGGTCACGTATAACATGGCAGCTCAATACAATTACCCCCCAGTTGCGGATATCTGTGAGGGCATTAATGGAGCTGCCTATGGAGATGATATCCTTAGTAGGATATACGGAGGTATTGTGGCTGCCTATGGAAACATCACATGCGATGATAATCCAGATAAATACACTGATAGTGATATTGATGCAAAGGAATTTAACGGTTGGGGTTGGCAGGTAATCACATTTTAATTGCAGTCCTTATATGAAAGAGTAAATAATGAATTATTACTTTGTATATCTTGTTGATCTAATAATAAATTGAATTATTACACGTTCAGAGTTGCACGGAAATGGTGGCGCCCATTGGCATAGGGAATTCTTCCATGTTTCAACCTCAACCTTTCAACTTCAAGAACTATGCTGAGCGATGCAAGAAAGATTATGGAGTATCACCTCGCCCTCATTTTATCACTTCCTGCTACGGAGGACATGTACGTAGTTTTATAACATTTAGATATCAATTTCACTATTGAGATTGTATTAACAGCATAATTAATTTCATCATTGTGACTAATTGCCAGGATATAAAGTTGGTTCTCAAAAGGTTTGCCAGCAACATTATTTTCTCTAATGGGCTAAAAGATCCTTGGAGTAGTGGAGGGTAAACACATAAAATCCAATAAATAAATTCATCTTGGTTATTTTAGAACAATGTTTTAAAATAAATTGTGGCTGTTACATATTTCAGGGTTCTGCATGATTTATCAGATAGTCTTGTGGCCCTTCCGACGATCAATGGTATGCATGTCTTGGTATTGGCTGAATACACACAATTTAGTTGTCTATTTATATTATATAATAAAAACTATAATATAAATAAATAGAGAATACATTGTAGTAGTATTAAGAGTACCTTGCTGATTTTTATCATTTTATATCAAAATGTAAACCAATTAATCAAATGGTTATGTAAATGTTTAACAAATGTTTATTTTTCAGGAACTCATACCCAGGATCTCATGCTTGCAAATGAAAATGATCCCGGATGGTTAGTTGATCAAAGAAAGCAAGAGGTAGAGATAATCAAGAGATGGATTGCACAGTATTACGCTGATAGAGCATGA
Protein sequence

>MS.gene026902.t1

MEKFISFNLLCIFFLCFFVTTTKSLMLQQLSVLSEWKTIKYQNPETLNFNEDFHTYFYKQTLDHFNYLTETSKTFKQRYVVNFKYWGGANSSAPILVSLGGESEIEYSPDFMTDNAASLKALLVYIEHRYYGKSVPFKSREAFKNTSTLGYLNAAQALQDYADVLIHLKASLDAQKSPVIVIGGSYAGMLATWFRLKYPHITIGALASSAPLLYFDSITPENAYFDVITRDFKDTSETCYKFILHSWSEIDRVASQPNGLSILSQKFKTCHPLEKADKLKESLRVTYNMAAQYNYPPVADICEGINGAAYGDDILSRIYGGIVAAYGNITCDDNPDKYTDSDIDAKEFNGWGWQSCTEMVAPIGIGNSSMFQPQPFNFKNYAERCKKDYGVSPRPHFITSCYGGHDLMLANENDPGWLVDQRKQEVEIIKRWIAQYYADRA