Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45615.t1 | XP_013457514.1 | 88.4 | 528 | 38 | 2 | 1 | 506 | 1 | 527 | 4.10E-272 | 946.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45615.t1 | Q5RBU7 | 44.7 | 465 | 241 | 7 | 43 | 499 | 35 | 491 | 3.1e-119 | 430.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45615.t1 | A0A072V0A2 | 88.4 | 528 | 38 | 2 | 1 | 506 | 1 | 527 | 2.9e-272 | 946.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070732 | MS.gene45615 | PPI |
| MS.gene62301 | MS.gene45615 | PPI |
| MS.gene45615 | MS.gene026902 | PPI |
| MS.gene070733 | MS.gene45615 | PPI |
| MS.gene073123 | MS.gene45615 | PPI |
| MS.gene94623 | MS.gene45615 | PPI |
| MS.gene63370 | MS.gene45615 | PPI |
| MS.gene63371 | MS.gene45615 | PPI |
| MS.gene62304 | MS.gene45615 | PPI |
| MS.gene35332 | MS.gene45615 | PPI |
| MS.gene026899 | MS.gene45615 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45615.t1 | MTR_4g097590 | 89.583 | 528 | 32 | 2 | 1 | 506 | 1 | 527 | 0.0 | 946 |
| MS.gene45615.t1 | MTR_7g105400 | 51.923 | 468 | 216 | 5 | 38 | 499 | 33 | 497 | 1.46e-175 | 503 |
| MS.gene45615.t1 | MTR_7g105390 | 52.993 | 451 | 205 | 4 | 56 | 499 | 47 | 497 | 1.65e-174 | 501 |
| MS.gene45615.t1 | MTR_7g105390 | 47.216 | 449 | 182 | 5 | 56 | 499 | 65 | 463 | 1.80e-138 | 407 |
| MS.gene45615.t1 | MTR_2g084535 | 46.813 | 455 | 213 | 8 | 57 | 497 | 56 | 495 | 4.34e-135 | 400 |
| MS.gene45615.t1 | MTR_2g075300 | 42.283 | 473 | 237 | 9 | 39 | 502 | 34 | 479 | 2.66e-120 | 362 |
| MS.gene45615.t1 | MTR_8g076210 | 30.467 | 407 | 220 | 13 | 60 | 444 | 17 | 382 | 5.33e-35 | 136 |
| MS.gene45615.t1 | MTR_8g072340 | 45.963 | 161 | 17 | 4 | 347 | 485 | 93 | 205 | 1.71e-31 | 120 |
| MS.gene45615.t1 | MTR_5g021530 | 28.145 | 469 | 269 | 18 | 57 | 494 | 37 | 468 | 2.79e-27 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45615.t1 | AT5G65760 | 72.297 | 444 | 121 | 1 | 55 | 496 | 57 | 500 | 0.0 | 690 |
| MS.gene45615.t1 | AT2G24280 | 55.675 | 467 | 199 | 5 | 39 | 501 | 29 | 491 | 0.0 | 544 |
| MS.gene45615.t1 | AT2G24280 | 55.746 | 409 | 173 | 5 | 39 | 443 | 29 | 433 | 3.89e-163 | 469 |
| MS.gene45615.t1 | AT5G22860 | 40.040 | 502 | 278 | 7 | 11 | 501 | 7 | 496 | 5.79e-118 | 357 |
| MS.gene45615.t1 | AT5G22860 | 40.043 | 462 | 254 | 8 | 11 | 461 | 7 | 456 | 4.47e-103 | 317 |
| MS.gene45615.t1 | AT5G22860 | 39.865 | 444 | 244 | 7 | 11 | 443 | 7 | 438 | 1.40e-96 | 299 |
| MS.gene45615.t1 | AT5G22860 | 39.865 | 444 | 244 | 7 | 11 | 443 | 7 | 438 | 1.40e-96 | 299 |
| MS.gene45615.t1 | AT5G22860 | 38.221 | 416 | 234 | 7 | 11 | 415 | 7 | 410 | 4.02e-83 | 266 |
| MS.gene45615.t1 | AT5G22860 | 38.221 | 416 | 234 | 7 | 11 | 415 | 7 | 410 | 4.02e-83 | 266 |
| MS.gene45615.t1 | AT5G22860 | 38.221 | 416 | 234 | 7 | 11 | 415 | 7 | 410 | 4.02e-83 | 266 |
| MS.gene45615.t1 | AT5G22860 | 37.772 | 368 | 206 | 7 | 11 | 367 | 7 | 362 | 2.20e-69 | 226 |
| MS.gene45615.t1 | AT3G28680 | 35.152 | 165 | 91 | 4 | 179 | 337 | 6 | 160 | 2.17e-25 | 103 |
| MS.gene45615.t1 | AT2G18080 | 25.458 | 546 | 293 | 17 | 6 | 501 | 5 | 486 | 5.50e-25 | 108 |
| MS.gene45615.t1 | AT4G36190 | 42.331 | 163 | 80 | 5 | 60 | 215 | 49 | 204 | 5.95e-23 | 102 |
| MS.gene45615.t1 | AT4G36195 | 39.264 | 163 | 85 | 4 | 60 | 215 | 49 | 204 | 1.66e-22 | 100 |
| MS.gene45615.t1 | AT4G36195 | 39.264 | 163 | 85 | 4 | 60 | 215 | 49 | 204 | 1.66e-22 | 100 |
| MS.gene45615.t1 | AT4G36195 | 39.264 | 163 | 85 | 4 | 60 | 215 | 49 | 204 | 1.82e-22 | 100 |
Find 134 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCTCCTGTTGTCTTATT+TGG | 0.072346 | 8.4:+24936100 | MS.gene45615:CDS |
| TCTGAGTGGTTGGAACTTTC+AGG | 0.128056 | 8.4:+24938400 | MS.gene45615:CDS |
| GAAAATTTACCAAAGAATTT+TGG | 0.166099 | 8.4:-24935538 | None:intergenic |
| ATATTGTAGCATCGATATTA+TGG | 0.187941 | 8.4:+24935944 | MS.gene45615:intron |
| CATCTCACGTTGGGGAAATT+TGG | 0.192369 | 8.4:+24938792 | MS.gene45615:CDS |
| AAACGGATTACTACAGTATT+TGG | 0.208789 | 8.4:+24938655 | MS.gene45615:CDS |
| ATTACCACAATAGAGGAAAA+TGG | 0.227615 | 8.4:-24935725 | None:intergenic |
| GGAGTCTGCATATAGTTATT+TGG | 0.239792 | 8.4:+24937042 | MS.gene45615:CDS |
| AATCACACTCCAAAATTCTT+TGG | 0.253619 | 8.4:+24935529 | MS.gene45615:CDS |
| AAGTATCCTCATATTGCTAT+TGG | 0.255745 | 8.4:+24936563 | MS.gene45615:CDS |
| CTGACAAAATCTGAATGTTT+TGG | 0.267415 | 8.4:-24936872 | None:intergenic |
| ACAATGTCATAGAAAGTTTC+TGG | 0.268432 | 8.4:-24936635 | None:intergenic |
| AGTATCCTCATATTGCTATT+GGG | 0.301189 | 8.4:+24936564 | MS.gene45615:CDS |
| TATGGGGAGTCTGTGCCTTT+TGG | 0.322898 | 8.4:+24935962 | MS.gene45615:CDS |
| GAGTCGTTGTTGGAAGAATT+TGG | 0.326045 | 8.4:-24935620 | None:intergenic |
| GGTGCACACCATATAGATTT+AGG | 0.330037 | 8.4:+24939109 | MS.gene45615:intron |
| CAAACACAACTTTATAGTTC+TGG | 0.336508 | 8.4:-24939219 | None:intergenic |
| ACCTTATCAACACAGAAAAC+TGG | 0.343571 | 8.4:+24935686 | MS.gene45615:CDS |
| TTCAGAAAGTATTGTTTCTC+TGG | 0.346716 | 8.4:+24938996 | MS.gene45615:CDS |
| ATCAAACTAACCTCCTTGAT+AGG | 0.349096 | 8.4:-24937118 | None:intergenic |
| AAGAATATCCATCTCACGTT+GGG | 0.350451 | 8.4:+24938783 | MS.gene45615:intron |
| TATAAGAATTCTTCCACGTT+AGG | 0.356364 | 8.4:+24936001 | MS.gene45615:CDS |
| TAAAGAGCACTGAAGATCTA+TGG | 0.363172 | 8.4:+24937011 | MS.gene45615:CDS |
| TTGAAGCACCTAAATCTATA+TGG | 0.363642 | 8.4:-24939117 | None:intergenic |
| GAGGATTGCCTCAAGAATTT+CGG | 0.366801 | 8.4:+24938616 | MS.gene45615:CDS |
| GAGTTCTTGATGCCTTTGCC+TGG | 0.374134 | 8.4:+24937091 | MS.gene45615:CDS |
| CTTTGCTTTACCAACCAATC+AGG | 0.378963 | 8.4:-24939151 | None:intergenic |
| ATGTCTTCAAACTGAAGAAT+TGG | 0.382835 | 8.4:-24936605 | None:intergenic |
| AATACTGTAGTAATCCGTTT+TGG | 0.384085 | 8.4:-24938652 | None:intergenic |
| TATTGTAGCATCGATATTAT+GGG | 0.398894 | 8.4:+24935945 | MS.gene45615:intron |
| TGACTGTGACTGAGAGGGTT+TGG | 0.407640 | 8.4:-24935569 | None:intergenic |
| CCCTGCTGGGACTAGTATAC+TGG | 0.409241 | 8.4:+24938295 | MS.gene45615:CDS |
| TCTCCTGTTGTCTTATTTGG+AGG | 0.414863 | 8.4:+24936103 | MS.gene45615:CDS |
| CAACAGAAAATGATCCTGAT+TGG | 0.422392 | 8.4:+24939137 | MS.gene45615:CDS |
| GTCTTATTTGGAGGATCCTA+TGG | 0.423762 | 8.4:+24936112 | MS.gene45615:CDS |
| TTCCTCTATTGTGGTAATGA+AGG | 0.423767 | 8.4:+24935730 | MS.gene45615:CDS |
| GTGGAAACATGCTGAACTTT+CGG | 0.431895 | 8.4:-24938564 | None:intergenic |
| TGGGAAATCGCTCCGAAGTT+CGG | 0.435860 | 8.4:+24935790 | MS.gene45615:CDS |
| GGTTTAGGCATGCACTGAAA+TGG | 0.438030 | 8.4:+24938522 | MS.gene45615:intron |
| AGGATAGATAAAGGCCCTGC+TGG | 0.440352 | 8.4:+24938281 | MS.gene45615:CDS |
| GAAGAGTAATTATACTCATA+TGG | 0.449549 | 8.4:-24938586 | None:intergenic |
| GAAAACTGGGTCGTTGGATC+GGG | 0.458334 | 8.4:+24935700 | MS.gene45615:CDS |
| GTAATGAAGGTGACATTGTT+TGG | 0.463623 | 8.4:+24935743 | MS.gene45615:CDS |
| CGAACTTACCTTAAAACCAT+TGG | 0.465734 | 8.4:-24936660 | None:intergenic |
| AATGTCTACTACAATTATAC+TGG | 0.466025 | 8.4:+24938338 | MS.gene45615:CDS |
| GCTTCTTCTTTACTTCCAAA+AGG | 0.468143 | 8.4:-24935977 | None:intergenic |
| TTACCACAATAGAGGAAAAT+GGG | 0.471722 | 8.4:-24935724 | None:intergenic |
| GATCCTCCAAATAAGACAAC+AGG | 0.472975 | 8.4:-24936106 | None:intergenic |
| GTCACAGTCACAGCCACAAT+TGG | 0.473302 | 8.4:+24935582 | MS.gene45615:CDS |
| TTCTATGACATTGTTTCCAA+TGG | 0.474249 | 8.4:+24936644 | MS.gene45615:CDS |
| CAAATTTCCCCAACGTGAGA+TGG | 0.475279 | 8.4:-24938791 | None:intergenic |
| GTTTCTCTGGTGACTGAAGA+AGG | 0.480434 | 8.4:+24939009 | MS.gene45615:CDS |
| ATCAAGAACTCAGAAGGGTA+TGG | 0.484345 | 8.4:-24937079 | None:intergenic |
| GTTTGCAGAAGGATAGATAA+AGG | 0.486472 | 8.4:+24938272 | MS.gene45615:CDS |
| TGCATATAGTTATTTGGCAA+TGG | 0.488874 | 8.4:+24937048 | MS.gene45615:CDS |
| TGTTGATAAGGTAGCGTTGA+GGG | 0.492096 | 8.4:-24935675 | None:intergenic |
| AGAAAACTGGGTCGTTGGAT+CGG | 0.495530 | 8.4:+24935699 | MS.gene45615:CDS |
| CGCTCCGAAGTTCGGAGCCA+TGG | 0.495989 | 8.4:+24935798 | MS.gene45615:CDS |
| ACCTCCTTGATAGGGTGTCC+AGG | 0.498397 | 8.4:-24937109 | None:intergenic |
| ATAAGAATTCTTCCACGTTA+GGG | 0.498678 | 8.4:+24936002 | MS.gene45615:CDS |
| TGAAGTGGTCGAGTCGTTGT+TGG | 0.499023 | 8.4:-24935630 | None:intergenic |
| CAAATGGCCTATTGGATCCA+TGG | 0.499366 | 8.4:+24938832 | MS.gene45615:CDS |
| AGAGATTATGATGATAAGAG+TGG | 0.506200 | 8.4:-24935482 | None:intergenic |
| ATCCTCATGGTCTGAGTGGT+TGG | 0.507139 | 8.4:+24938390 | MS.gene45615:CDS |
| CACCACTCCATGGATCCAAT+AGG | 0.510198 | 8.4:-24938839 | None:intergenic |
| GCACTGAAGATCTATGGAAC+TGG | 0.510335 | 8.4:+24937017 | MS.gene45615:CDS |
| CACCTTCATTACCACAATAG+AGG | 0.514961 | 8.4:-24935732 | None:intergenic |
| GTATCCTCATATTGCTATTG+GGG | 0.523000 | 8.4:+24936565 | MS.gene45615:CDS |
| TCCAGTATACTAGTCCCAGC+AGG | 0.524915 | 8.4:-24938296 | None:intergenic |
| TTAACTATATAAAGCAGTCA+TGG | 0.526435 | 8.4:+24936800 | MS.gene45615:CDS |
| GTTTGGTTTGCTCAAAACAC+TGG | 0.528202 | 8.4:+24935760 | MS.gene45615:CDS |
| AACACAGAAAACTGGGTCGT+TGG | 0.530504 | 8.4:+24935694 | MS.gene45615:CDS |
| TGATTGGTTGGTAAAGCAAA+GGG | 0.535743 | 8.4:+24939153 | MS.gene45615:CDS |
| GAGTGAAGCCAAGGCCAAAA+CGG | 0.535816 | 8.4:+24938638 | MS.gene45615:CDS |
| TGGATCCATGGAGTGGTGGC+AGG | 0.541273 | 8.4:+24938844 | MS.gene45615:CDS |
| AGAAAATGATCCTGATTGGT+TGG | 0.541455 | 8.4:+24939141 | MS.gene45615:CDS |
| ACGACCATGGCTCCGAACTT+CGG | 0.542721 | 8.4:-24935802 | None:intergenic |
| TTTGCCTGGACACCCTATCA+AGG | 0.543228 | 8.4:+24937105 | MS.gene45615:CDS |
| TAAGACAACAGGAGAAGCAT+TGG | 0.545142 | 8.4:-24936095 | None:intergenic |
| GTTTATCAGTGTTAGCAGCA+TGG | 0.547154 | 8.4:+24936531 | MS.gene45615:intron |
| GGCTGTGACTGTGACTGAGA+GGG | 0.554038 | 8.4:-24935574 | None:intergenic |
| AAAGGCATCAAGAACTCAGA+AGG | 0.554763 | 8.4:-24937085 | None:intergenic |
| TCAAACTAACCTCCTTGATA+GGG | 0.555408 | 8.4:-24937117 | None:intergenic |
| AGTGCCCCAATAGCAATATG+AGG | 0.558308 | 8.4:-24936569 | None:intergenic |
| CGGATTACTACAGTATTTGG+AGG | 0.559733 | 8.4:+24938658 | MS.gene45615:CDS |
| TACTTTAACAGGTTTGCAGA+AGG | 0.560532 | 8.4:+24938261 | MS.gene45615:intron |
| CCTTATCAACACAGAAAACT+GGG | 0.566661 | 8.4:+24935687 | MS.gene45615:CDS |
| GCTTCACTCCGAAATTCTTG+AGG | 0.566759 | 8.4:-24938624 | None:intergenic |
| AATTCTTGAGGCAATCCTCT+CGG | 0.568694 | 8.4:-24938612 | None:intergenic |
| TGTGATTCAAAGCAAAAGCT+TGG | 0.568802 | 8.4:-24935513 | None:intergenic |
| ATGGGATGACATAGAATCGA+AGG | 0.569369 | 8.4:+24936819 | MS.gene45615:CDS |
| TAACTATATAAAGCAGTCAT+GGG | 0.569573 | 8.4:+24936801 | MS.gene45615:CDS |
| TTGTATTAGCTTGATCTCAG+TGG | 0.571836 | 8.4:-24939176 | None:intergenic |
| GAGTGTCTTACTTCCACCAT+AGG | 0.572177 | 8.4:-24936128 | None:intergenic |
| TATCACCTGCCACCACTCCA+TGG | 0.573825 | 8.4:-24938849 | None:intergenic |
| TCAAGAACTCAGAAGGGTAT+GGG | 0.576645 | 8.4:-24937078 | None:intergenic |
| TCGAAGGGTCAAACAAGTGA+TGG | 0.577493 | 8.4:+24936835 | MS.gene45615:CDS |
| TTGATAGGGTGTCCAGGCAA+AGG | 0.578962 | 8.4:-24937103 | None:intergenic |
| CTGATTGGTTGGTAAAGCAA+AGG | 0.582278 | 8.4:+24939152 | MS.gene45615:CDS |
| GGATAGATAAAGGCCCTGCT+GGG | 0.583277 | 8.4:+24938282 | MS.gene45615:CDS |
| TGGCTGTGACTGTGACTGAG+AGG | 0.592599 | 8.4:-24935575 | None:intergenic |
| GAAGAATATCCATCTCACGT+TGG | 0.594365 | 8.4:+24938782 | MS.gene45615:intron |
| GGAAGAATTTGGTTTCGTAG+TGG | 0.598470 | 8.4:-24935609 | None:intergenic |
| GAACTGGATGATGATCCTCA+TGG | 0.603016 | 8.4:+24938377 | MS.gene45615:CDS |
| TGAAGATCTATGGAACTGGT+TGG | 0.604641 | 8.4:+24937021 | MS.gene45615:CDS |
| AGATCAAGCTAATACAAGGA+TGG | 0.611530 | 8.4:+24939182 | MS.gene45615:CDS |
| TTATTTGGAGGATCCTATGG+TGG | 0.613532 | 8.4:+24936115 | MS.gene45615:CDS |
| TCGTAGTGGATATCCAATTG+TGG | 0.615599 | 8.4:-24935595 | None:intergenic |
| CTATTGGATCCATGGAGTGG+TGG | 0.619177 | 8.4:+24938840 | MS.gene45615:CDS |
| ATTGTAGCATCGATATTATG+GGG | 0.619770 | 8.4:+24935946 | MS.gene45615:intron |
| ATACTGGAGCGCATATACGA+GGG | 0.620335 | 8.4:+24938311 | MS.gene45615:CDS |
| AGAATTTCGGAGTGAAGCCA+AGG | 0.621803 | 8.4:+24938629 | MS.gene45615:CDS |
| GAGTAATTATACTCATATGG+TGG | 0.629068 | 8.4:-24938583 | None:intergenic |
| ACTGAGATCAAGCTAATACA+AGG | 0.630890 | 8.4:+24939178 | MS.gene45615:CDS |
| AACTTTCGGCTGCTAGACAT+CGG | 0.635841 | 8.4:-24938550 | None:intergenic |
| TAATTACTCTTCTTTCCGAG+AGG | 0.643189 | 8.4:+24938597 | MS.gene45615:CDS |
| TATACTGGAGCGCATATACG+AGG | 0.643510 | 8.4:+24938310 | MS.gene45615:CDS |
| GGATTACTACAGTATTTGGA+GGG | 0.644022 | 8.4:+24938659 | MS.gene45615:CDS |
| GATGATCCTCATGGTCTGAG+TGG | 0.655248 | 8.4:+24938386 | MS.gene45615:CDS |
| TACTTCGGGGAAAACGACCA+TGG | 0.663338 | 8.4:-24935815 | None:intergenic |
| TACTGGAGCGCATATACGAG+GGG | 0.663470 | 8.4:+24938312 | MS.gene45615:CDS |
| AGAATATCCATCTCACGTTG+GGG | 0.676042 | 8.4:+24938784 | MS.gene45615:intron |
| TGGGATGACATAGAATCGAA+GGG | 0.679275 | 8.4:+24936820 | MS.gene45615:CDS |
| GTGTTGATAAGGTAGCGTTG+AGG | 0.684679 | 8.4:-24935676 | None:intergenic |
| AAGGCATCAAGAACTCAGAA+GGG | 0.686106 | 8.4:-24937084 | None:intergenic |
| TTCCAACCACTCAGACCATG+AGG | 0.689493 | 8.4:-24938392 | None:intergenic |
| GCCTGGACACCCTATCAAGG+AGG | 0.690287 | 8.4:+24937108 | MS.gene45615:CDS |
| CCAGTATACTAGTCCCAGCA+GGG | 0.691394 | 8.4:-24938295 | None:intergenic |
| AAGAGTGGAAATGAGTGTTG+TGG | 0.695653 | 8.4:-24935467 | None:intergenic |
| ATGTCATAGAAAGTTTCTGG+TGG | 0.697736 | 8.4:-24936632 | None:intergenic |
| AACATTAAGATACCCTAACG+TGG | 0.697811 | 8.4:-24936014 | None:intergenic |
| GGCCTATTGGATCCATGGAG+TGG | 0.702021 | 8.4:+24938837 | MS.gene45615:CDS |
| ACTGGAGCGCATATACGAGG+GGG | 0.737840 | 8.4:+24938313 | MS.gene45615:CDS |
| GTAGCGTTGAGGGAACGTAG+AGG | 0.740430 | 8.4:-24935665 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACATAAAACAATATAACA+AGG | - | chr8.4:24938896-24938915 | None:intergenic | 15.0% |
| !! | AAATACTAAATCAATTGATA+AGG | + | chr8.4:24937749-24937768 | MS.gene45615:intron | 15.0% |
| !! | CTTTAAGTCATAAAAATATT+CGG | + | chr8.4:24936352-24936371 | MS.gene45615:intron | 15.0% |
| !! | TATAAAAAAATATCATCAGT+AGG | - | chr8.4:24937704-24937723 | None:intergenic | 15.0% |
| !! | TCAAATTATGAATAATCAAA+TGG | - | chr8.4:24939040-24939059 | None:intergenic | 15.0% |
| !! | TCTTATATATATACTTTAAC+AGG | + | chr8.4:24938250-24938269 | MS.gene45615:intron | 15.0% |
| !!! | ATTTTTAATTTCCGTTAATT+AGG | - | chr8.4:24938112-24938131 | None:intergenic | 15.0% |
| !!! | CACTTTTACTAATTTAATAA+AGG | - | chr8.4:24936323-24936342 | None:intergenic | 15.0% |
| !!! | TGCTTAATTACTTTTTTTTA+GGG | - | chr8.4:24938086-24938105 | None:intergenic | 15.0% |
| !!! | TTGCTTAATTACTTTTTTTT+AGG | - | chr8.4:24938087-24938106 | None:intergenic | 15.0% |
| !! | AAACAATATAACAAGGATAT+TGG | - | chr8.4:24938889-24938908 | None:intergenic | 20.0% |
| !! | AAAGAAGAAGAAAACAAATT+TGG | - | chr8.4:24938159-24938178 | None:intergenic | 20.0% |
| !! | AATCAAAGATTAATGCTATT+TGG | - | chr8.4:24938480-24938499 | None:intergenic | 20.0% |
| !! | ATTAAGCAAATCCTAATTAA+CGG | + | chr8.4:24938098-24938117 | MS.gene45615:intron | 20.0% |
| !!! | AGAAAACAAATTTGGAATAA+TGG | - | chr8.4:24938151-24938170 | None:intergenic | 20.0% |
| !!! | CTTTCTCTTATATTTAAAAC+CGG | - | chr8.4:24935865-24935884 | None:intergenic | 20.0% |
| !!! | GAAAATTTACCAAAGAATTT+TGG | - | chr8.4:24935541-24935560 | None:intergenic | 20.0% |
| !!! | TAGTCTTTTTAGTTTCAAAT+TGG | + | chr8.4:24936296-24936315 | MS.gene45615:intron | 20.0% |
| !!! | TTTTTTCATCTTATATTCTC+AGG | + | chr8.4:24939088-24939107 | MS.gene45615:intron | 20.0% |
| ! | AATGTCTACTACAATTATAC+TGG | + | chr8.4:24938338-24938357 | MS.gene45615:CDS | 25.0% |
| ! | CTAAAATGGTAGATTAGTAT+TGG | - | chr8.4:24937649-24937668 | None:intergenic | 25.0% |
| ! | GAAGAGTAATTATACTCATA+TGG | - | chr8.4:24938589-24938608 | None:intergenic | 25.0% |
| ! | GACATAAATACACATTTCTT+AGG | - | chr8.4:24936910-24936929 | None:intergenic | 25.0% |
| ! | TAACTATATAAAGCAGTCAT+GGG | + | chr8.4:24936801-24936820 | MS.gene45615:CDS | 25.0% |
| ! | TAATATCACAACAATGGAAA+TGG | - | chr8.4:24938719-24938738 | None:intergenic | 25.0% |
| ! | TACTCGAATTAATAGAAACA+AGG | - | chr8.4:24936158-24936177 | None:intergenic | 25.0% |
| ! | TATTAATTCGAGTAATCAGT+TGG | + | chr8.4:24936164-24936183 | MS.gene45615:intron | 25.0% |
| ! | TTAACTATATAAAGCAGTCA+TGG | + | chr8.4:24936800-24936819 | MS.gene45615:CDS | 25.0% |
| !! | ACAAATTTGGAATAATGGTT+AGG | - | chr8.4:24938146-24938165 | None:intergenic | 25.0% |
| !! | ATACTAATCTACCATTTTAG+AGG | + | chr8.4:24937649-24937668 | MS.gene45615:intron | 25.0% |
| !! | CAACAAGCAATAATGTTTTA+CGG | + | chr8.4:24938919-24938938 | MS.gene45615:intron | 25.0% |
| !! | TTTTCGTTTAACGTTTGTAT+CGG | + | chr8.4:24936262-24936281 | MS.gene45615:intron | 25.0% |
| !!! | ACATGCAAGAAATCATTTTT+AGG | - | chr8.4:24937621-24937640 | None:intergenic | 25.0% |
| !!! | ATATTGTAGCATCGATATTA+TGG | + | chr8.4:24935944-24935963 | MS.gene45615:intron | 25.0% |
| !!! | ATTAGTTTGCGGTTTTATTT+TGG | + | chr8.4:24936400-24936419 | MS.gene45615:intron | 25.0% |
| !!! | ATTGTTGATGTTAGTTTTTC+TGG | + | chr8.4:24936691-24936710 | MS.gene45615:intron | 25.0% |
| !!! | TAAAAATATTCGGTGTTTTG+CGG | + | chr8.4:24936362-24936381 | MS.gene45615:intron | 25.0% |
| !!! | TACTTTTTTTTAGGGTAAAC+TGG | - | chr8.4:24938078-24938097 | None:intergenic | 25.0% |
| !!! | TATTGTAGCATCGATATTAT+GGG | + | chr8.4:24935945-24935964 | MS.gene45615:intron | 25.0% |
| !!! | TTGTTTCTTGCTTTTACAAA+AGG | - | chr8.4:24937560-24937579 | None:intergenic | 25.0% |
| AAGTATCCTCATATTGCTAT+TGG | + | chr8.4:24936563-24936582 | MS.gene45615:CDS | 30.0% | |
| AATCACACTCCAAAATTCTT+TGG | + | chr8.4:24935529-24935548 | MS.gene45615:CDS | 30.0% | |
| ACAATGTCATAGAAAGTTTC+TGG | - | chr8.4:24936638-24936657 | None:intergenic | 30.0% | |
| AGAGATTATGATGATAAGAG+TGG | - | chr8.4:24935485-24935504 | None:intergenic | 30.0% | |
| AGAGCATAATATCACAACAA+TGG | - | chr8.4:24938725-24938744 | None:intergenic | 30.0% | |
| AGCATCATAAAAAACAGTCA+AGG | - | chr8.4:24937212-24937231 | None:intergenic | 30.0% | |
| ATAAGAATTCTTCCACGTTA+GGG | + | chr8.4:24936002-24936021 | MS.gene45615:CDS | 30.0% | |
| ATGTCTTCAAACTGAAGAAT+TGG | - | chr8.4:24936608-24936627 | None:intergenic | 30.0% | |
| ATTACCACAATAGAGGAAAA+TGG | - | chr8.4:24935728-24935747 | None:intergenic | 30.0% | |
| CAAACACAACTTTATAGTTC+TGG | - | chr8.4:24939222-24939241 | None:intergenic | 30.0% | |
| CCAGTTAACATAATTAGAAC+TGG | - | chr8.4:24935908-24935927 | None:intergenic | 30.0% | |
| CGTAAAACATTATTGCTTGT+TGG | - | chr8.4:24938921-24938940 | None:intergenic | 30.0% | |
| GAAGGAATAAAATTGTGTTG+TGG | + | chr8.4:24937487-24937506 | MS.gene45615:intron | 30.0% | |
| GAGTAATTATACTCATATGG+TGG | - | chr8.4:24938586-24938605 | None:intergenic | 30.0% | |
| GTAGAAAACAGTAGCTATAA+CGG | + | chr8.4:24937358-24937377 | MS.gene45615:intron | 30.0% | |
| TATAAGAATTCTTCCACGTT+AGG | + | chr8.4:24936001-24936020 | MS.gene45615:CDS | 30.0% | |
| TGATAGAATAGTTAACAGTG+CGG | - | chr8.4:24937180-24937199 | None:intergenic | 30.0% | |
| TGCATATAGTTATTTGGCAA+TGG | + | chr8.4:24937048-24937067 | MS.gene45615:CDS | 30.0% | |
| TTACCACAATAGAGGAAAAT+GGG | - | chr8.4:24935727-24935746 | None:intergenic | 30.0% | |
| TTCTATGACATTGTTTCCAA+TGG | + | chr8.4:24936644-24936663 | MS.gene45615:CDS | 30.0% | |
| TTTAACGTTGTTCTATTCCT+AGG | - | chr8.4:24937973-24937992 | None:intergenic | 30.0% | |
| TTTCCAGTCACATAAATAAC+AGG | - | chr8.4:24938753-24938772 | None:intergenic | 30.0% | |
| ! | AATACTGTAGTAATCCGTTT+TGG | - | chr8.4:24938655-24938674 | None:intergenic | 30.0% |
| ! | AGCAACATCATTTTCTCAAA+TGG | + | chr8.4:24938816-24938835 | MS.gene45615:CDS | 30.0% |
| ! | AGTATCCTCATATTGCTATT+GGG | + | chr8.4:24936564-24936583 | MS.gene45615:CDS | 30.0% |
| ! | CCAGTTCTAATTATGTTAAC+TGG | + | chr8.4:24935905-24935924 | MS.gene45615:intron | 30.0% |
| ! | CTGACAAAATCTGAATGTTT+TGG | - | chr8.4:24936875-24936894 | None:intergenic | 30.0% |
| ! | TCTCTTATATTTAAAACCGG+AGG | - | chr8.4:24935862-24935881 | None:intergenic | 30.0% |
| ! | TTAATCTGTAGCCTCTAAAA+TGG | - | chr8.4:24937663-24937682 | None:intergenic | 30.0% |
| ! | TTAGTTTAACTGCTTGTTGA+AGG | + | chr8.4:24936984-24937003 | MS.gene45615:intron | 30.0% |
| ! | TTGAAGCACCTAAATCTATA+TGG | - | chr8.4:24939120-24939139 | None:intergenic | 30.0% |
| !! | AAACGGATTACTACAGTATT+TGG | + | chr8.4:24938655-24938674 | MS.gene45615:CDS | 30.0% |
| !! | AGAAGCTAAATGTTTTGAAC+TGG | + | chr8.4:24938361-24938380 | MS.gene45615:CDS | 30.0% |
| !! | ATATCATCAGTAGGTTGATT+AGG | - | chr8.4:24937695-24937714 | None:intergenic | 30.0% |
| !! | ATTGTAGCATCGATATTATG+GGG | + | chr8.4:24935946-24935965 | MS.gene45615:intron | 30.0% |
| !! | CATTGTTTCCAATGGTTTTA+AGG | + | chr8.4:24936652-24936671 | MS.gene45615:CDS | 30.0% |
| !! | TTCAGAAAGTATTGTTTCTC+TGG | + | chr8.4:24938996-24939015 | MS.gene45615:CDS | 30.0% |
| !!! | ATGTTTTGGTTAGAAGTTCA+AGG | - | chr8.4:24936861-24936880 | None:intergenic | 30.0% |
| !!! | TCAAAACACTGGTTTTGTTT+GGG | + | chr8.4:24935771-24935790 | MS.gene45615:CDS | 30.0% |
| !!! | TTATGCTGATGTTGTTTTGT+TGG | + | chr8.4:24936509-24936528 | MS.gene45615:intron | 30.0% |
| !!! | TTTGCGGTTTTATTTTGGAT+CGG | + | chr8.4:24936405-24936424 | MS.gene45615:intron | 30.0% |
| AAACCATGGACAAGAAAAGA+TGG | - | chr8.4:24938507-24938526 | None:intergenic | 35.0% | |
| AAACTTAAAACTCTCGAGGT+AGG | + | chr8.4:24937990-24938009 | MS.gene45615:intron | 35.0% | |
| AACATTAAGATACCCTAACG+TGG | - | chr8.4:24936017-24936036 | None:intergenic | 35.0% | |
| AACTTAAAACTCTCGAGGTA+GGG | + | chr8.4:24937991-24938010 | MS.gene45615:intron | 35.0% | |
| AAGAATATCCATCTCACGTT+GGG | + | chr8.4:24938783-24938802 | MS.gene45615:intron | 35.0% | |
| AAGATAGTCAGATTCCTTTC+TGG | - | chr8.4:24938224-24938243 | None:intergenic | 35.0% | |
| ACAGAGTATGACACTTACTT+CGG | - | chr8.4:24935833-24935852 | None:intergenic | 35.0% | |
| ACCTTATCAACACAGAAAAC+TGG | + | chr8.4:24935686-24935705 | MS.gene45615:CDS | 35.0% | |
| ACTGAGATCAAGCTAATACA+AGG | + | chr8.4:24939178-24939197 | MS.gene45615:CDS | 35.0% | |
| AGAAAATGATCCTGATTGGT+TGG | + | chr8.4:24939141-24939160 | MS.gene45615:CDS | 35.0% | |
| AGATCAAGCTAATACAAGGA+TGG | + | chr8.4:24939182-24939201 | MS.gene45615:CDS | 35.0% | |
| ATCAAACTAACCTCCTTGAT+AGG | - | chr8.4:24937121-24937140 | None:intergenic | 35.0% | |
| CAACAGAAAATGATCCTGAT+TGG | + | chr8.4:24939137-24939156 | MS.gene45615:CDS | 35.0% | |
| CAATTTGCGGTTTACAATAC+TGG | + | chr8.4:24937430-24937449 | MS.gene45615:intron | 35.0% | |
| CCTTATCAACACAGAAAACT+GGG | + | chr8.4:24935687-24935706 | MS.gene45615:CDS | 35.0% | |
| CGAACTTACCTTAAAACCAT+TGG | - | chr8.4:24936663-24936682 | None:intergenic | 35.0% | |
| CGTTAAACTTAAAACTCTCG+AGG | + | chr8.4:24937986-24938005 | MS.gene45615:intron | 35.0% | |
| GCTTCTTCTTTACTTCCAAA+AGG | - | chr8.4:24935980-24935999 | None:intergenic | 35.0% | |
| GGAGTCTGCATATAGTTATT+TGG | + | chr8.4:24937042-24937061 | MS.gene45615:CDS | 35.0% | |
| GGATTACTACAGTATTTGGA+GGG | + | chr8.4:24938659-24938678 | MS.gene45615:CDS | 35.0% | |
| GTAATGAAGGTGACATTGTT+TGG | + | chr8.4:24935743-24935762 | MS.gene45615:CDS | 35.0% | |
| GTTTGCAGAAGGATAGATAA+AGG | + | chr8.4:24938272-24938291 | MS.gene45615:CDS | 35.0% | |
| TAATTACTCTTCTTTCCGAG+AGG | + | chr8.4:24938597-24938616 | MS.gene45615:CDS | 35.0% | |
| TACTTATCCAGCAACAACTA+AGG | - | chr8.4:24938451-24938470 | None:intergenic | 35.0% | |
| TACTTTAACAGGTTTGCAGA+AGG | + | chr8.4:24938261-24938280 | MS.gene45615:intron | 35.0% | |
| TCAAACTAACCTCCTTGATA+GGG | - | chr8.4:24937120-24937139 | None:intergenic | 35.0% | |
| TGTGATTCAAAGCAAAAGCT+TGG | - | chr8.4:24935516-24935535 | None:intergenic | 35.0% | |
| TTCTTATTCGAAGTCCAGAA+AGG | + | chr8.4:24938207-24938226 | MS.gene45615:intron | 35.0% | |
| ! | ATGTCATAGAAAGTTTCTGG+TGG | - | chr8.4:24936635-24936654 | None:intergenic | 35.0% |
| ! | ATTCCATCTTTTCTTGTCCA+TGG | + | chr8.4:24938501-24938520 | MS.gene45615:intron | 35.0% |
| ! | CAAGCAATAATGTTTTACGG+TGG | + | chr8.4:24938922-24938941 | MS.gene45615:intron | 35.0% |
| ! | CATTTTCTCAAATGGCCTAT+TGG | + | chr8.4:24938824-24938843 | MS.gene45615:CDS | 35.0% |
| ! | CTAGCAGTGTTGTTAAATAG+TGG | + | chr8.4:24937263-24937282 | MS.gene45615:intron | 35.0% |
| ! | CTGGTTTCTAGGAATATGTT+TGG | + | chr8.4:24937449-24937468 | MS.gene45615:intron | 35.0% |
| ! | GTATCCTCATATTGCTATTG+GGG | + | chr8.4:24936565-24936584 | MS.gene45615:CDS | 35.0% |
| ! | TCACCTGTTATTTATGTGAC+TGG | + | chr8.4:24938747-24938766 | MS.gene45615:intron | 35.0% |
| ! | TCTTTTCTTGTCCATGGTTT+AGG | + | chr8.4:24938507-24938526 | MS.gene45615:intron | 35.0% |
| ! | TGCTGGGAAATTGACTTTAA+TGG | + | chr8.4:24937231-24937250 | MS.gene45615:intron | 35.0% |
| ! | TGGGAAATTGACTTTAATGG+TGG | + | chr8.4:24937234-24937253 | MS.gene45615:intron | 35.0% |
| ! | TGTTTTTCCTTAGTTGTTGC+TGG | + | chr8.4:24938441-24938460 | MS.gene45615:intron | 35.0% |
| ! | TTCCTCTATTGTGGTAATGA+AGG | + | chr8.4:24935730-24935749 | MS.gene45615:CDS | 35.0% |
| ! | TTGTATTAGCTTGATCTCAG+TGG | - | chr8.4:24939179-24939198 | None:intergenic | 35.0% |
| ! | TTTTGCGGTTTTCGGTTTTT+TGG | + | chr8.4:24936377-24936396 | MS.gene45615:intron | 35.0% |
| !! | AATTTGACTTGTCTGTTGCA+TGG | + | chr8.4:24939053-24939072 | MS.gene45615:intron | 35.0% |
| !! | GGTTTACAATACTGGTTTCT+AGG | + | chr8.4:24937438-24937457 | MS.gene45615:intron | 35.0% |
| !! | TAAAGAGCACTGAAGATCTA+TGG | + | chr8.4:24937011-24937030 | MS.gene45615:CDS | 35.0% |
| !! | TGATTGGTTGGTAAAGCAAA+GGG | + | chr8.4:24939153-24939172 | MS.gene45615:CDS | 35.0% |
| !! | TTATAAACCCAAGAGTGCTA+GGG | + | chr8.4:24937905-24937924 | MS.gene45615:intron | 35.0% |
| !!! | ACTGTTTTTTATGATGCTGC+TGG | + | chr8.4:24937214-24937233 | MS.gene45615:intron | 35.0% |
| !!! | CGGTTTTTTGGATTAGTTTG+CGG | + | chr8.4:24936389-24936408 | MS.gene45615:intron | 35.0% |
| !!! | CTCAAAACACTGGTTTTGTT+TGG | + | chr8.4:24935770-24935789 | MS.gene45615:CDS | 35.0% |
| !!! | CTGTTTTTTATGATGCTGCT+GGG | + | chr8.4:24937215-24937234 | MS.gene45615:intron | 35.0% |
| !!! | GGTTTTATTTTGGATCGGTT+TGG | + | chr8.4:24936410-24936429 | MS.gene45615:intron | 35.0% |
| AATTCTTGAGGCAATCCTCT+CGG | - | chr8.4:24938615-24938634 | None:intergenic | 40.0% | |
| ACACCTTATGAGCTTCTAGT+AGG | - | chr8.4:24936447-24936466 | None:intergenic | 40.0% | |
| ACCTTATGAGCTTCTAGTAG+GGG | - | chr8.4:24936445-24936464 | None:intergenic | 40.0% | |
| AGAATATCCATCTCACGTTG+GGG | + | chr8.4:24938784-24938803 | MS.gene45615:intron | 40.0% | |
| AGAGTATGACACTTACTTCG+GGG | - | chr8.4:24935831-24935850 | None:intergenic | 40.0% | |
| AGGTCTTGAAAAAGCTGAAG+TGG | - | chr8.4:24935648-24935667 | None:intergenic | 40.0% | |
| ATCAAGAACTCAGAAGGGTA+TGG | - | chr8.4:24937082-24937101 | None:intergenic | 40.0% | |
| ATGGGATGACATAGAATCGA+AGG | + | chr8.4:24936819-24936838 | MS.gene45615:CDS | 40.0% | |
| CACCTTATGAGCTTCTAGTA+GGG | - | chr8.4:24936446-24936465 | None:intergenic | 40.0% | |
| CACCTTCATTACCACAATAG+AGG | - | chr8.4:24935735-24935754 | None:intergenic | 40.0% | |
| CAGAGTATGACACTTACTTC+GGG | - | chr8.4:24935832-24935851 | None:intergenic | 40.0% | |
| CCACTACTTTCAGCAATTTG+CGG | + | chr8.4:24937417-24937436 | MS.gene45615:intron | 40.0% | |
| CGGATTACTACAGTATTTGG+AGG | + | chr8.4:24938658-24938677 | MS.gene45615:CDS | 40.0% | |
| CGTTGTTCTATTCCTAGGAT+TGG | - | chr8.4:24937968-24937987 | None:intergenic | 40.0% | |
| CTAGCACTCTTGGGTTTATA+AGG | - | chr8.4:24937906-24937925 | None:intergenic | 40.0% | |
| CTTTGCTTTACCAACCAATC+AGG | - | chr8.4:24939154-24939173 | None:intergenic | 40.0% | |
| GAAGAATATCCATCTCACGT+TGG | + | chr8.4:24938782-24938801 | MS.gene45615:intron | 40.0% | |
| GAGGATTGCCTCAAGAATTT+CGG | + | chr8.4:24938616-24938635 | MS.gene45615:CDS | 40.0% | |
| GAGTCGTTGTTGGAAGAATT+TGG | - | chr8.4:24935623-24935642 | None:intergenic | 40.0% | |
| GATCCTCCAAATAAGACAAC+AGG | - | chr8.4:24936109-24936128 | None:intergenic | 40.0% | |
| GGTGCACACCATATAGATTT+AGG | + | chr8.4:24939109-24939128 | MS.gene45615:intron | 40.0% | |
| GTGGAAACATGCTGAACTTT+CGG | - | chr8.4:24938567-24938586 | None:intergenic | 40.0% | |
| GTTTATCAGTGTTAGCAGCA+TGG | + | chr8.4:24936531-24936550 | MS.gene45615:intron | 40.0% | |
| TGAAGATCTATGGAACTGGT+TGG | + | chr8.4:24937021-24937040 | MS.gene45615:CDS | 40.0% | |
| TGGGATGACATAGAATCGAA+GGG | + | chr8.4:24936820-24936839 | MS.gene45615:CDS | 40.0% | |
| TTATTTGGAGGATCCTATGG+TGG | + | chr8.4:24936115-24936134 | MS.gene45615:CDS | 40.0% | |
| ! | AAGAGTGGAAATGAGTGTTG+TGG | - | chr8.4:24935470-24935489 | None:intergenic | 40.0% |
| ! | AAGGCATCAAGAACTCAGAA+GGG | - | chr8.4:24937087-24937106 | None:intergenic | 40.0% |
| ! | GCTTCTCCTGTTGTCTTATT+TGG | + | chr8.4:24936100-24936119 | MS.gene45615:CDS | 40.0% |
| ! | GGAAGAATTTGGTTTCGTAG+TGG | - | chr8.4:24935612-24935631 | None:intergenic | 40.0% |
| ! | GTTATAGCTCTATAGCGTAG+CGG | + | chr8.4:24937296-24937315 | MS.gene45615:intron | 40.0% |
| ! | TAAGACAACAGGAGAAGCAT+TGG | - | chr8.4:24936098-24936117 | None:intergenic | 40.0% |
| ! | TCAAGAACTCAGAAGGGTAT+GGG | - | chr8.4:24937081-24937100 | None:intergenic | 40.0% |
| ! | TGGTCTCTTATCTGACTTGA+AGG | + | chr8.4:24937469-24937488 | MS.gene45615:intron | 40.0% |
| ! | TGTTGATAAGGTAGCGTTGA+GGG | - | chr8.4:24935678-24935697 | None:intergenic | 40.0% |
| !! | AAAGGCATCAAGAACTCAGA+AGG | - | chr8.4:24937088-24937107 | None:intergenic | 40.0% |
| !! | AATCAGTTGGTTTGATGCCT+AGG | + | chr8.4:24936177-24936196 | MS.gene45615:intron | 40.0% |
| !! | CCCAGTTTTCTGTGTTGATA+AGG | - | chr8.4:24935690-24935709 | None:intergenic | 40.0% |
| !! | CTGATTGGTTGGTAAAGCAA+AGG | + | chr8.4:24939152-24939171 | MS.gene45615:CDS | 40.0% |
| !! | CTTATAAACCCAAGAGTGCT+AGG | + | chr8.4:24937904-24937923 | MS.gene45615:intron | 40.0% |
| !! | GTCTTATTTGGAGGATCCTA+TGG | + | chr8.4:24936112-24936131 | MS.gene45615:CDS | 40.0% |
| !! | GTTTGGTTTGCTCAAAACAC+TGG | + | chr8.4:24935760-24935779 | MS.gene45615:CDS | 40.0% |
| !! | TCGTAGTGGATATCCAATTG+TGG | - | chr8.4:24935598-24935617 | None:intergenic | 40.0% |
| !! | TCTCCTGTTGTCTTATTTGG+AGG | + | chr8.4:24936103-24936122 | MS.gene45615:CDS | 40.0% |
| !!! | ATTCGGTGTTTTGCGGTTTT+CGG | + | chr8.4:24936369-24936388 | MS.gene45615:intron | 40.0% |
| AACACAGAAAACTGGGTCGT+TGG | + | chr8.4:24935694-24935713 | MS.gene45615:CDS | 45.0% | |
| AACTTTCGGCTGCTAGACAT+CGG | - | chr8.4:24938553-24938572 | None:intergenic | 45.0% | |
| ACCCCTACTAGAAGCTCATA+AGG | + | chr8.4:24936441-24936460 | MS.gene45615:intron | 45.0% | |
| AGAAAACTGGGTCGTTGGAT+CGG | + | chr8.4:24935699-24935718 | MS.gene45615:CDS | 45.0% | |
| AGAATTTCGGAGTGAAGCCA+AGG | + | chr8.4:24938629-24938648 | MS.gene45615:CDS | 45.0% | |
| AGTGCCCCAATAGCAATATG+AGG | - | chr8.4:24936572-24936591 | None:intergenic | 45.0% | |
| ATACTGGAGCGCATATACGA+GGG | + | chr8.4:24938311-24938330 | MS.gene45615:CDS | 45.0% | |
| CAAATGGCCTATTGGATCCA+TGG | + | chr8.4:24938832-24938851 | MS.gene45615:CDS | 45.0% | |
| CAAATTTCCCCAACGTGAGA+TGG | - | chr8.4:24938794-24938813 | None:intergenic | 45.0% | |
| CATACTCTGTAACACTCCTC+CGG | + | chr8.4:24935843-24935862 | MS.gene45615:intron | 45.0% | |
| CATCTCACGTTGGGGAAATT+TGG | + | chr8.4:24938792-24938811 | MS.gene45615:CDS | 45.0% | |
| CCGCAAATTGCTGAAAGTAG+TGG | - | chr8.4:24937420-24937439 | None:intergenic | 45.0% | |
| CTAGGATTGGATTCGAATGC+AGG | - | chr8.4:24937955-24937974 | None:intergenic | 45.0% | |
| CTGCATTCGAATCCAATCCT+AGG | + | chr8.4:24937953-24937972 | MS.gene45615:intron | 45.0% | |
| GAACTGGATGATGATCCTCA+TGG | + | chr8.4:24938377-24938396 | MS.gene45615:CDS | 45.0% | |
| GAGTGTCTTACTTCCACCAT+AGG | - | chr8.4:24936131-24936150 | None:intergenic | 45.0% | |
| GCACTGAAGATCTATGGAAC+TGG | + | chr8.4:24937017-24937036 | MS.gene45615:CDS | 45.0% | |
| GCTTCACTCCGAAATTCTTG+AGG | - | chr8.4:24938627-24938646 | None:intergenic | 45.0% | |
| GGTTTAGGCATGCACTGAAA+TGG | + | chr8.4:24938522-24938541 | MS.gene45615:intron | 45.0% | |
| GTTAATCCCTCAAGTCAGGT+AGG | - | chr8.4:24938035-24938054 | None:intergenic | 45.0% | |
| GTTTCTCTGGTGACTGAAGA+AGG | + | chr8.4:24939009-24939028 | MS.gene45615:CDS | 45.0% | |
| TATACTGGAGCGCATATACG+AGG | + | chr8.4:24938310-24938329 | MS.gene45615:CDS | 45.0% | |
| TCGAAGGGTCAAACAAGTGA+TGG | + | chr8.4:24936835-24936854 | MS.gene45615:CDS | 45.0% | |
| TCTGAGTGGTTGGAACTTTC+AGG | + | chr8.4:24938400-24938419 | MS.gene45615:CDS | 45.0% | |
| TGACAATGTCTCACACACCT+AGG | - | chr8.4:24936197-24936216 | None:intergenic | 45.0% | |
| TTCAGTGCATGCCTAAACCA+TGG | - | chr8.4:24938521-24938540 | None:intergenic | 45.0% | |
| TTGTCCTTGACAAAGCTTGC+AGG | + | chr8.4:24937582-24937601 | MS.gene45615:intron | 45.0% | |
| ! | GGTCCCATTTTCCTCTATTG+TGG | + | chr8.4:24935721-24935740 | MS.gene45615:CDS | 45.0% |
| ! | GTGTTGATAAGGTAGCGTTG+AGG | - | chr8.4:24935679-24935698 | None:intergenic | 45.0% |
| ! | TTGTCCTGCAAGCTTTGTCA+AGG | - | chr8.4:24937589-24937608 | None:intergenic | 45.0% |
| !! | GTAGTAATCCGTTTTGGCCT+TGG | - | chr8.4:24938649-24938668 | None:intergenic | 45.0% |
| AGGATAGATAAAGGCCCTGC+TGG | + | chr8.4:24938281-24938300 | MS.gene45615:CDS | 50.0% | |
| AGGTAGGGTTATGCGCTCAT+TGG | + | chr8.4:24938006-24938025 | MS.gene45615:intron | 50.0% | |
| AGTGCTAGGGTGAGATGGTT+CGG | + | chr8.4:24937918-24937937 | MS.gene45615:intron | 50.0% | |
| ATCCTCATGGTCTGAGTGGT+TGG | + | chr8.4:24938390-24938409 | MS.gene45615:CDS | 50.0% | |
| ATTAACCTCGTGTGCGCGAA+AGG | + | chr8.4:24938049-24938068 | MS.gene45615:intron | 50.0% | |
| CACCACTCCATGGATCCAAT+AGG | - | chr8.4:24938842-24938861 | None:intergenic | 50.0% | |
| CATCTCACCCTAGCACTCTT+GGG | - | chr8.4:24937915-24937934 | None:intergenic | 50.0% | |
| CCAGTATACTAGTCCCAGCA+GGG | - | chr8.4:24938298-24938317 | None:intergenic | 50.0% | |
| CGAGGTTAATCCCTCAAGTC+AGG | - | chr8.4:24938039-24938058 | None:intergenic | 50.0% | |
| CTATTGGATCCATGGAGTGG+TGG | + | chr8.4:24938840-24938859 | MS.gene45615:CDS | 50.0% | |
| GAAAACTGGGTCGTTGGATC+GGG | + | chr8.4:24935700-24935719 | MS.gene45615:CDS | 50.0% | |
| GAGTGAAGCCAAGGCCAAAA+CGG | + | chr8.4:24938638-24938657 | MS.gene45615:CDS | 50.0% | |
| GAGTTCTTGATGCCTTTGCC+TGG | + | chr8.4:24937091-24937110 | MS.gene45615:CDS | 50.0% | |
| GATGATCCTCATGGTCTGAG+TGG | + | chr8.4:24938386-24938405 | MS.gene45615:CDS | 50.0% | |
| GGATAGATAAAGGCCCTGCT+GGG | + | chr8.4:24938282-24938301 | MS.gene45615:CDS | 50.0% | |
| GGTAGGGTTATGCGCTCATT+GGG | + | chr8.4:24938007-24938026 | MS.gene45615:intron | 50.0% | |
| GTAGGGTTATGCGCTCATTG+GGG | + | chr8.4:24938008-24938027 | MS.gene45615:intron | 50.0% | |
| GTCACAGTCACAGCCACAAT+TGG | + | chr8.4:24935582-24935601 | MS.gene45615:CDS | 50.0% | |
| GTTAACAGTGCGGCTGAGTT+AGG | - | chr8.4:24937170-24937189 | None:intergenic | 50.0% | |
| TACTGGAGCGCATATACGAG+GGG | + | chr8.4:24938312-24938331 | MS.gene45615:CDS | 50.0% | |
| TACTTCGGGGAAAACGACCA+TGG | - | chr8.4:24935818-24935837 | None:intergenic | 50.0% | |
| TCCAGTATACTAGTCCCAGC+AGG | - | chr8.4:24938299-24938318 | None:intergenic | 50.0% | |
| TGAAGTGGTCGAGTCGTTGT+TGG | - | chr8.4:24935633-24935652 | None:intergenic | 50.0% | |
| TGACTGTGACTGAGAGGGTT+TGG | - | chr8.4:24935572-24935591 | None:intergenic | 50.0% | |
| TGGGAAATCGCTCCGAAGTT+CGG | + | chr8.4:24935790-24935809 | MS.gene45615:CDS | 50.0% | |
| TGTGGACCTTCACGTAGTCA+CGG | + | chr8.4:24937505-24937524 | MS.gene45615:intron | 50.0% | |
| TTCCAACCACTCAGACCATG+AGG | - | chr8.4:24938395-24938414 | None:intergenic | 50.0% | |
| TTTGCCTGGACACCCTATCA+AGG | + | chr8.4:24937105-24937124 | MS.gene45615:CDS | 50.0% | |
| ! | TATGGGGAGTCTGTGCCTTT+TGG | + | chr8.4:24935962-24935981 | MS.gene45615:CDS | 50.0% |
| ! | TGAGATGGTTCGGGTCTCTT+AGG | + | chr8.4:24937928-24937947 | MS.gene45615:intron | 50.0% |
| ! | TTGATAGGGTGTCCAGGCAA+AGG | - | chr8.4:24937106-24937125 | None:intergenic | 50.0% |
| ACGACCATGGCTCCGAACTT+CGG | - | chr8.4:24935805-24935824 | None:intergenic | 55.0% | |
| ACTGGAGCGCATATACGAGG+GGG | + | chr8.4:24938313-24938332 | MS.gene45615:CDS | 55.0% | |
| CCATCTCACCCTAGCACTCT+TGG | - | chr8.4:24937916-24937935 | None:intergenic | 55.0% | |
| CTAGACCCGTGACTACGTGA+AGG | - | chr8.4:24937514-24937533 | None:intergenic | 55.0% | |
| GGCCTATTGGATCCATGGAG+TGG | + | chr8.4:24938837-24938856 | MS.gene45615:CDS | 55.0% | |
| GGCTGTGACTGTGACTGAGA+GGG | - | chr8.4:24935577-24935596 | None:intergenic | 55.0% | |
| GTGCTAGGGTGAGATGGTTC+GGG | + | chr8.4:24937919-24937938 | MS.gene45615:intron | 55.0% | |
| GTGGACCTTCACGTAGTCAC+GGG | + | chr8.4:24937506-24937525 | MS.gene45615:intron | 55.0% | |
| TATCACCTGCCACCACTCCA+TGG | - | chr8.4:24938852-24938871 | None:intergenic | 55.0% | |
| TGGCTGTGACTGTGACTGAG+AGG | - | chr8.4:24935578-24935597 | None:intergenic | 55.0% | |
| ! | ACCTCCTTGATAGGGTGTCC+AGG | - | chr8.4:24937112-24937131 | None:intergenic | 55.0% |
| ! | CCCTGCTGGGACTAGTATAC+TGG | + | chr8.4:24938295-24938314 | MS.gene45615:CDS | 55.0% |
| ! | GTAGCGTTGAGGGAACGTAG+AGG | - | chr8.4:24935668-24935687 | None:intergenic | 55.0% |
| ! | TGGGGTCCTACCTGACTTGA+GGG | + | chr8.4:24938026-24938045 | MS.gene45615:intron | 55.0% |
| ! | TTGGGGTCCTACCTGACTTG+AGG | + | chr8.4:24938025-24938044 | MS.gene45615:intron | 55.0% |
| !! | CCAAGAGTGCTAGGGTGAGA+TGG | + | chr8.4:24937913-24937932 | MS.gene45615:intron | 55.0% |
| CGTAGTCACGGGTCTAGACG+TGG | + | chr8.4:24937517-24937536 | MS.gene45615:intron | 60.0% | |
| GCCTGGACACCCTATCAAGG+AGG | + | chr8.4:24937108-24937127 | MS.gene45615:CDS | 60.0% | |
| GGATACCTTTCGCGCACACG+AGG | - | chr8.4:24938057-24938076 | None:intergenic | 60.0% | |
| GGCGTTGCAGCACTGTTGTG+TGG | + | chr8.4:24937379-24937398 | MS.gene45615:intron | 60.0% | |
| TGGATCCATGGAGTGGTGGC+AGG | + | chr8.4:24938844-24938863 | MS.gene45615:CDS | 60.0% | |
| CGCTCCGAAGTTCGGAGCCA+TGG | + | chr8.4:24935798-24935817 | MS.gene45615:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 24935448 | 24939249 | 24935448 | ID=MS.gene45615 |
| chr8.4 | mRNA | 24935448 | 24939249 | 24935448 | ID=MS.gene45615.t1;Parent=MS.gene45615 |
| chr8.4 | exon | 24935448 | 24935834 | 24935448 | ID=MS.gene45615.t1.exon1;Parent=MS.gene45615.t1 |
| chr8.4 | CDS | 24935448 | 24935834 | 24935448 | ID=cds.MS.gene45615.t1;Parent=MS.gene45615.t1 |
| chr8.4 | exon | 24935953 | 24936139 | 24935953 | ID=MS.gene45615.t1.exon2;Parent=MS.gene45615.t1 |
| chr8.4 | CDS | 24935953 | 24936139 | 24935953 | ID=cds.MS.gene45615.t1;Parent=MS.gene45615.t1 |
| chr8.4 | exon | 24936540 | 24936673 | 24936540 | ID=MS.gene45615.t1.exon3;Parent=MS.gene45615.t1 |
| chr8.4 | CDS | 24936540 | 24936673 | 24936540 | ID=cds.MS.gene45615.t1;Parent=MS.gene45615.t1 |
| chr8.4 | exon | 24936781 | 24936893 | 24936781 | ID=MS.gene45615.t1.exon4;Parent=MS.gene45615.t1 |
| chr8.4 | CDS | 24936781 | 24936893 | 24936781 | ID=cds.MS.gene45615.t1;Parent=MS.gene45615.t1 |
| chr8.4 | exon | 24937006 | 24937129 | 24937006 | ID=MS.gene45615.t1.exon5;Parent=MS.gene45615.t1 |
| chr8.4 | CDS | 24937006 | 24937129 | 24937006 | ID=cds.MS.gene45615.t1;Parent=MS.gene45615.t1 |
| chr8.4 | exon | 24938272 | 24938421 | 24938272 | ID=MS.gene45615.t1.exon6;Parent=MS.gene45615.t1 |
| chr8.4 | CDS | 24938272 | 24938421 | 24938272 | ID=cds.MS.gene45615.t1;Parent=MS.gene45615.t1 |
| chr8.4 | exon | 24938529 | 24938684 | 24938529 | ID=MS.gene45615.t1.exon7;Parent=MS.gene45615.t1 |
| chr8.4 | CDS | 24938529 | 24938684 | 24938529 | ID=cds.MS.gene45615.t1;Parent=MS.gene45615.t1 |
| chr8.4 | exon | 24938786 | 24938865 | 24938786 | ID=MS.gene45615.t1.exon8;Parent=MS.gene45615.t1 |
| chr8.4 | CDS | 24938786 | 24938865 | 24938786 | ID=cds.MS.gene45615.t1;Parent=MS.gene45615.t1 |
| chr8.4 | exon | 24938981 | 24939030 | 24938981 | ID=MS.gene45615.t1.exon9;Parent=MS.gene45615.t1 |
| chr8.4 | CDS | 24938981 | 24939030 | 24938981 | ID=cds.MS.gene45615.t1;Parent=MS.gene45615.t1 |
| chr8.4 | exon | 24939110 | 24939249 | 24939110 | ID=MS.gene45615.t1.exon10;Parent=MS.gene45615.t1 |
| chr8.4 | CDS | 24939110 | 24939249 | 24939110 | ID=cds.MS.gene45615.t1;Parent=MS.gene45615.t1 |
| Gene Sequence |
| Protein sequence |
