AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene44433


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44433.t1 MTR_4g097590 89.811 530 29 3 1 508 1 527 0.0 949
MS.gene44433.t1 MTR_7g105400 52.229 471 217 4 36 501 30 497 3.09e-180 515
MS.gene44433.t1 MTR_7g105390 52.008 473 220 4 36 501 25 497 4.47e-179 513
MS.gene44433.t1 MTR_7g105390 46.497 471 197 5 36 501 43 463 8.76e-143 419
MS.gene44433.t1 MTR_2g084535 47.033 455 212 8 59 499 56 495 1.02e-136 405
MS.gene44433.t1 MTR_2g075300 42.495 473 238 8 39 504 34 479 1.02e-121 365
MS.gene44433.t1 MTR_8g076210 29.680 438 242 15 62 475 17 412 6.94e-35 136
MS.gene44433.t1 MTR_8g072340 47.205 161 15 4 349 487 93 205 4.94e-33 125
MS.gene44433.t1 MTR_5g021530 27.957 465 267 18 63 496 41 468 2.23e-27 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44433.t1 AT5G65760 65.795 497 165 3 6 498 5 500 0.0 691
MS.gene44433.t1 AT2G24280 56.332 458 192 5 50 503 38 491 0.0 545
MS.gene44433.t1 AT2G24280 56.000 400 168 5 50 445 38 433 5.11e-162 466
MS.gene44433.t1 AT5G22860 39.841 502 281 6 11 503 7 496 1.10e-118 358
MS.gene44433.t1 AT5G22860 39.610 462 258 6 11 463 7 456 5.89e-104 319
MS.gene44433.t1 AT5G22860 39.640 444 247 6 11 445 7 438 2.21e-97 301
MS.gene44433.t1 AT5G22860 39.640 444 247 6 11 445 7 438 2.21e-97 301
MS.gene44433.t1 AT5G22860 37.981 416 237 6 11 417 7 410 5.82e-84 268
MS.gene44433.t1 AT5G22860 37.981 416 237 6 11 417 7 410 5.82e-84 268
MS.gene44433.t1 AT5G22860 37.981 416 237 6 11 417 7 410 5.82e-84 268
MS.gene44433.t1 AT5G22860 37.500 368 209 6 11 369 7 362 8.60e-70 228
MS.gene44433.t1 AT2G18080 26.087 552 284 21 6 503 5 486 1.43e-25 110
MS.gene44433.t1 AT3G28680 35.152 165 91 4 181 339 6 160 2.70e-25 103
MS.gene44433.t1 AT4G36190 41.718 163 81 5 62 217 49 204 8.10e-23 101
MS.gene44433.t1 AT4G36195 38.650 163 86 4 62 217 49 204 2.33e-22 100
MS.gene44433.t1 AT4G36195 38.650 163 86 4 62 217 49 204 2.33e-22 100
MS.gene44433.t1 AT4G36195 38.650 163 86 4 62 217 49 204 3.02e-22 100

Find 140 sgRNAs with CRISPR-Local

Find 321 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTCTCCTGTTGTCTTATT+TGG 0.072346 8.1:+24867510 MS.gene44433:CDS
TCTGAGTGGTTGGAACTTTC+AGG 0.128056 8.1:+24870777 MS.gene44433:CDS
GGAAATTTACCAAAGAATTT+TGG 0.166099 8.1:-24866971 None:intergenic
CATCTCACGTTGGGGAAATT+TGG 0.192369 8.1:+24871169 MS.gene44433:CDS
AAACGGATTACTACAGTATT+TGG 0.208789 8.1:+24871032 MS.gene44433:CDS
GGAGTCTGCATATAGTTATT+TGG 0.239792 8.1:+24869431 MS.gene44433:CDS
ATTACCACAGTAGAGGAAAA+TGG 0.242578 8.1:-24867164 None:intergenic
AATCACACTCCAAAATTCTT+TGG 0.253619 8.1:+24866962 MS.gene44433:CDS
AAGTATCCTCATATTGCTAT+TGG 0.255745 8.1:+24868953 MS.gene44433:CDS
ATATTGTAGCATCGATATTA+TGG 0.257569 8.1:+24867354 MS.gene44433:intron
CTGACAAAATCTGAATGTTT+TGG 0.267415 8.1:-24869261 None:intergenic
ACAATGTCATAGAAAGTTTC+TGG 0.268432 8.1:-24869025 None:intergenic
CTCAAAACACTGGATTTGTT+TGG 0.276994 8.1:+24867209 MS.gene44433:CDS
AGTATCCTCATATTGCTATT+GGG 0.301189 8.1:+24868954 MS.gene44433:CDS
CCCTGCTGGGACTAGTATTC+TGG 0.303278 8.1:+24870672 MS.gene44433:CDS
GAGTCGTTGTTGGAAGAATT+TGG 0.326045 8.1:-24867059 None:intergenic
CAAACACAACTTTATAGTTC+TGG 0.336508 8.1:-24871596 None:intergenic
TATAAGAATTCTTCCACGTT+AGG 0.340696 8.1:+24867411 MS.gene44433:CDS
ACCTTATCAACACAGAAAAC+TGG 0.343571 8.1:+24867125 MS.gene44433:CDS
TTCAGAAAGTATTGTTTCTC+TGG 0.346716 8.1:+24871373 MS.gene44433:CDS
ATCAAACTAACCTCCTTGAT+AGG 0.349096 8.1:-24869507 None:intergenic
AAGAATATCCATCTCACGTT+GGG 0.350451 8.1:+24871160 MS.gene44433:intron
TCAAAACACTGGATTTGTTT+GGG 0.359909 8.1:+24867210 MS.gene44433:CDS
TAAAGAGCACTGAAGATCTA+TGG 0.363172 8.1:+24869400 MS.gene44433:CDS
GCTGTGACTGTGACTGTGAC+TGG 0.365357 8.1:-24867012 None:intergenic
TTGAAGCACGTAAATCTATA+TGG 0.372122 8.1:-24871494 None:intergenic
GAGTTCTTGATGCCTTTGCC+TGG 0.374134 8.1:+24869480 MS.gene44433:CDS
TATGGTGAGTCTGTGCCTTT+TGG 0.378206 8.1:+24867372 MS.gene44433:CDS
ATGTCTTCAAACTGAAGAAT+TGG 0.382835 8.1:-24868995 None:intergenic
AATACTGTAGTAATCCGTTT+TGG 0.384085 8.1:-24871029 None:intergenic
TGACTGTGACTGGGAGGGTT+TGG 0.393315 8.1:-24867002 None:intergenic
TTCAAAACATTTAGCTTCTC+CGG 0.393625 8.1:-24870734 None:intergenic
AACGACCATGGCTCCGAACT+TGG 0.395214 8.1:-24867242 None:intergenic
TCTCCTGTTGTCTTATTTGG+AGG 0.414863 8.1:+24867513 MS.gene44433:CDS
TGGGAAATTGCTCCCAAGTT+CGG 0.417249 8.1:+24867229 MS.gene44433:CDS
CAACAGAAAATGATCCTGAT+TGG 0.422392 8.1:+24871514 MS.gene44433:CDS
TGGGAGGGTTTGGTTGAAGA+TGG 0.422644 8.1:-24866992 None:intergenic
GTCTTATTTGGAGGATCCTA+TGG 0.423762 8.1:+24867522 MS.gene44433:CDS
GTGGAAACATGCTGAACTTT+CGG 0.431895 8.1:-24870941 None:intergenic
AGGATAGATAAAGGCCCTGC+TGG 0.440352 8.1:+24870658 MS.gene44433:CDS
GAAGAGTAATTATACTCATA+TGG 0.449549 8.1:-24870963 None:intergenic
TTCCTCTACTGTGGTAATGA+AGG 0.450611 8.1:+24867169 MS.gene44433:CDS
TGAAGTGGTCGAGTCGTTGT+TGG 0.450962 8.1:-24867069 None:intergenic
ATAAGAATTCTTCCACGTTA+GGG 0.456394 8.1:+24867412 MS.gene44433:CDS
GAAAACTGGGTCGTTGGATC+GGG 0.458334 8.1:+24867139 MS.gene44433:CDS
GTAATGAAGGTGACATTGTT+TGG 0.463623 8.1:+24867182 MS.gene44433:CDS
CGAACTTACCTTAAAACCAT+TGG 0.465734 8.1:-24869050 None:intergenic
GATCCTCCAAATAAGACAAC+AGG 0.472975 8.1:-24867516 None:intergenic
GTCACAGTCACAGCCACAAT+TGG 0.473302 8.1:+24867021 MS.gene44433:CDS
TTCTATGACATTGTTTCCAA+TGG 0.474249 8.1:+24869034 MS.gene44433:CDS
GAGGATTGCCTCAAGAATTA+CGG 0.474689 8.1:+24870993 MS.gene44433:CDS
GCTTCTTCTTTACTTCCAAA+AGG 0.475154 8.1:-24867387 None:intergenic
CAAATTTCCCCAACGTGAGA+TGG 0.475279 8.1:-24871168 None:intergenic
TTACCACAGTAGAGGAAAAT+GGG 0.478521 8.1:-24867163 None:intergenic
GTTTCTCTGGTGACTGAAGA+AGG 0.480434 8.1:+24871386 MS.gene44433:CDS
ATCAAGAACTCAGAAGGGTA+TGG 0.484345 8.1:-24869468 None:intergenic
GTTTGCAGAAGGATAGATAA+AGG 0.486472 8.1:+24870649 MS.gene44433:CDS
CTTTGCTCTACCAACCAATC+AGG 0.487546 8.1:-24871528 None:intergenic
TGCATATAGTTATTTGGCAA+TGG 0.488874 8.1:+24869437 MS.gene44433:CDS
TGTTGATAAGGTAGCGTTGA+GGG 0.492096 8.1:-24867114 None:intergenic
AGAAAACTGGGTCGTTGGAT+CGG 0.495530 8.1:+24867138 MS.gene44433:CDS
ACCTCCTTGATAGGGTGTCC+AGG 0.498397 8.1:-24869498 None:intergenic
CAAATGGCCTATTGGATCCA+TGG 0.499366 8.1:+24871209 MS.gene44433:CDS
CTGTGACTGTGACTGTGACT+GGG 0.502809 8.1:-24867011 None:intergenic
TGATTGGTTGGTAGAGCAAA+GGG 0.504617 8.1:+24871530 MS.gene44433:CDS
AGAGATTATGATGATAAGAG+TGG 0.506200 8.1:-24866915 None:intergenic
TGCTCCCAAGTTCGGAGCCA+TGG 0.506223 8.1:+24867237 MS.gene44433:CDS
ATCCTCATGGTCTGAGTGGT+TGG 0.507139 8.1:+24870767 MS.gene44433:CDS
TCCAGAATACTAGTCCCAGC+AGG 0.509042 8.1:-24870673 None:intergenic
GTTGTTGGAAGAATTTGGTT+TGG 0.509803 8.1:-24867054 None:intergenic
CACCACTCCATGGATCCAAT+AGG 0.510198 8.1:-24871216 None:intergenic
GCACTGAAGATCTATGGAAC+TGG 0.510335 8.1:+24869406 MS.gene44433:CDS
GGAAGAATTTGGTTTGGTAG+TGG 0.520651 8.1:-24867048 None:intergenic
GTATCCTCATATTGCTATTG+GGG 0.523000 8.1:+24868955 MS.gene44433:CDS
TTAACTATATAAAGCAGTCA+TGG 0.526435 8.1:+24869189 MS.gene44433:CDS
GTTTGGTTCGCTCAAAACAC+TGG 0.527700 8.1:+24867199 MS.gene44433:CDS
GGTGTAGGCATGCACTGAAA+TGG 0.530351 8.1:+24870899 MS.gene44433:intron
AACACAGAAAACTGGGTCGT+TGG 0.530504 8.1:+24867133 MS.gene44433:CDS
TGGATCCATGGAGTGGTGGC+AGG 0.541273 8.1:+24871221 MS.gene44433:CDS
AATGTCTACTACAATTATAC+CGG 0.541857 8.1:+24870715 MS.gene44433:CDS
TTTGCCTGGACACCCTATCA+AGG 0.543228 8.1:+24869494 MS.gene44433:CDS
GAGTGAAGCCAAGGCCAAAA+CGG 0.544744 8.1:+24871015 MS.gene44433:CDS
TAAGACAACAGGAGAAGCAT+TGG 0.545142 8.1:-24867505 None:intergenic
ACGACCATGGCTCCGAACTT+GGG 0.546144 8.1:-24867241 None:intergenic
GTTTATCAGTGTTAGCAGCA+TGG 0.547154 8.1:+24868921 MS.gene44433:intron
AGAAAATGATCCTGATTGGT+TGG 0.551926 8.1:+24871518 MS.gene44433:CDS
AAAGGCATCAAGAACTCAGA+AGG 0.554763 8.1:-24869474 None:intergenic
TTCTTGTTACTGATTTGAAG+CGG 0.554809 8.1:+24867472 MS.gene44433:CDS
TCAAACTAACCTCCTTGATA+GGG 0.555408 8.1:-24869506 None:intergenic
AGTGCCCCAATAGCAATATG+AGG 0.558308 8.1:-24868959 None:intergenic
CGGATTACTACAGTATTTGG+AGG 0.559733 8.1:+24871035 MS.gene44433:CDS
TACTTTAACAGGTTTGCAGA+AGG 0.560532 8.1:+24870638 MS.gene44433:intron
GCTTCACTCCGTAATTCTTG+AGG 0.564197 8.1:-24871001 None:intergenic
CCTTATCAACACAGAAAACT+GGG 0.566661 8.1:+24867126 MS.gene44433:CDS
ATGGGATGACATAGAATCGA+AGG 0.569369 8.1:+24869208 MS.gene44433:CDS
TAACTATATAAAGCAGTCAT+GGG 0.569573 8.1:+24869190 MS.gene44433:CDS
GACTGTGACTGTGACTGGGA+GGG 0.570206 8.1:-24867007 None:intergenic
TTGTATTAGCTTGATCTCAG+TGG 0.571836 8.1:-24871553 None:intergenic
TATCACCTGCCACCACTCCA+TGG 0.573825 8.1:-24871226 None:intergenic
TCAAGAACTCAGAAGGGTAT+GGG 0.576645 8.1:-24869467 None:intergenic
TCGAAGGGTCAAACAAGTGA+TGG 0.577493 8.1:+24869224 MS.gene44433:CDS
TTGATAGGGTGTCCAGGCAA+AGG 0.578962 8.1:-24869492 None:intergenic
GAGCGTCTTACTTCCACCAT+AGG 0.579660 8.1:-24867538 None:intergenic
CTGATTGGTTGGTAGAGCAA+AGG 0.582278 8.1:+24871529 MS.gene44433:CDS
GGATAGATAAAGGCCCTGCT+GGG 0.583277 8.1:+24870659 MS.gene44433:CDS
AATTCTTGAGGCAATCCTCT+CGG 0.588482 8.1:-24870989 None:intergenic
GAAGAATATCCATCTCACGT+TGG 0.594365 8.1:+24871159 MS.gene44433:intron
TGGTAGTGGATATCCAATTG+TGG 0.601240 8.1:-24867034 None:intergenic
GAACTGGATGATGATCCTCA+TGG 0.603016 8.1:+24870754 MS.gene44433:CDS
TGAAGATCTATGGAACTGGT+TGG 0.604641 8.1:+24869410 MS.gene44433:CDS
ATTCTGGAGCGCATATACGA+GGG 0.605042 8.1:+24870688 MS.gene44433:CDS
AGATCAAGCTAATACAAGGA+TGG 0.611530 8.1:+24871559 MS.gene44433:CDS
TTATTTGGAGGATCCTATGG+TGG 0.613532 8.1:+24867525 MS.gene44433:CDS
TGACTGTGACTGTGACTGGG+AGG 0.613577 8.1:-24867008 None:intergenic
CACCTTCATTACCACAGTAG+AGG 0.616622 8.1:-24867171 None:intergenic
CTATTGGATCCATGGAGTGG+TGG 0.619177 8.1:+24871217 MS.gene44433:CDS
TGTGATTCAATGCAAAAGCT+TGG 0.622246 8.1:-24866946 None:intergenic
AGAATTACGGAGTGAAGCCA+AGG 0.626540 8.1:+24871006 MS.gene44433:CDS
GAGTAATTATACTCATATGG+TGG 0.629068 8.1:-24870960 None:intergenic
ACTGAGATCAAGCTAATACA+AGG 0.630890 8.1:+24871555 MS.gene44433:CDS
AACTTTCGGCTGCTAGACAT+CGG 0.635841 8.1:-24870927 None:intergenic
TATTCTGGAGCGCATATACG+AGG 0.636482 8.1:+24870687 MS.gene44433:CDS
TAATTACTCTTCTTTCCGAG+AGG 0.643189 8.1:+24870974 MS.gene44433:CDS
GGATTACTACAGTATTTGGA+GGG 0.644022 8.1:+24871036 MS.gene44433:CDS
GATGATCCTCATGGTCTGAG+TGG 0.655248 8.1:+24870763 MS.gene44433:CDS
TTCTGGAGCGCATATACGAG+GGG 0.656439 8.1:+24870689 MS.gene44433:CDS
AAGAGTGGAAATGAGTGTTG+TGG 0.661258 8.1:-24866900 None:intergenic
TACTTCGGGGAAAACGACCA+TGG 0.663338 8.1:-24867254 None:intergenic
CCAGAATACTAGTCCCAGCA+GGG 0.668424 8.1:-24870672 None:intergenic
AGAATATCCATCTCACGTTG+GGG 0.676042 8.1:+24871161 MS.gene44433:intron
TGGGATGACATAGAATCGAA+GGG 0.679275 8.1:+24869209 MS.gene44433:CDS
GTGTTGATAAGGTAGCGTTG+AGG 0.684679 8.1:-24867115 None:intergenic
AAGGCATCAAGAACTCAGAA+GGG 0.686106 8.1:-24869473 None:intergenic
TTCCAACCACTCAGACCATG+AGG 0.689493 8.1:-24870769 None:intergenic
GCCTGGACACCCTATCAAGG+AGG 0.690287 8.1:+24869497 MS.gene44433:CDS
ATGTCATAGAAAGTTTCTGG+TGG 0.697736 8.1:-24869022 None:intergenic
GGCCTATTGGATCCATGGAG+TGG 0.702021 8.1:+24871214 MS.gene44433:CDS
AGCATTAAGATACCCTAACG+TGG 0.721288 8.1:-24867424 None:intergenic
TCTGGAGCGCATATACGAGG+GGG 0.729029 8.1:+24870690 MS.gene44433:CDS
GTAGCGTTGAGGGAACGTAG+CGG 0.748305 8.1:-24867104 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTAAAACTAAAAATGT+TGG + chr8.1:24868102-24868121 MS.gene44433:intron 10.0%
!! ATAAAAAAAATATCATTAGT+AGG - chr8.1:24870094-24870113 None:intergenic 10.0%
!! AAACAATATAACAAAGATAT+TGG - chr8.1:24871266-24871285 None:intergenic 15.0%
!! AAATACTAAATCAATTGATA+AGG + chr8.1:24870138-24870157 MS.gene44433:intron 15.0%
!! TCAAATTATGAATAATCAAA+TGG - chr8.1:24871417-24871436 None:intergenic 15.0%
!! TCTTATATATATACTTTAAC+AGG + chr8.1:24870627-24870646 MS.gene44433:intron 15.0%
!!! ATTTTTAATTTCCGTTAATT+AGG - chr8.1:24870489-24870508 None:intergenic 15.0%
!!! TAGTTTTAATTTTTATCACT+CGG - chr8.1:24868095-24868114 None:intergenic 15.0%
!! AAAGAAGAAGAAAACAAATT+TGG - chr8.1:24870536-24870555 None:intergenic 20.0%
!! ATTAAGCAAATCCTAATTAA+CGG + chr8.1:24870475-24870494 MS.gene44433:intron 20.0%
!! GGAAAAACAAAATTTAAGTA+TGG - chr8.1:24870807-24870826 None:intergenic 20.0%
!!! AGAAAACAAATTTGGAATAA+TGG - chr8.1:24870528-24870547 None:intergenic 20.0%
!!! ATTTGATTTTGGAAATTAAG+AGG + chr8.1:24868544-24868563 MS.gene44433:intron 20.0%
!!! TACTTTTTTTTAGTGTAAAC+TGG - chr8.1:24870455-24870474 None:intergenic 20.0%
!!! TGTTTGATTTCAAAAATGAA+AGG + chr8.1:24868420-24868439 MS.gene44433:intron 20.0%
!!! TTTTATTATTTAAAGTTGGG+TGG - chr8.1:24868683-24868702 None:intergenic 20.0%
!!! TTTTTTCATCTTATATTCTC+AGG + chr8.1:24871465-24871484 MS.gene44433:intron 20.0%
! AATCAAAGGTTAATGCTATT+TGG - chr8.1:24870857-24870876 None:intergenic 25.0%
! AATGTCTACTACAATTATAC+CGG + chr8.1:24870715-24870734 MS.gene44433:CDS 25.0%
! AGAACATGAAATTGTTCATT+AGG + chr8.1:24868763-24868782 MS.gene44433:intron 25.0%
! CTAAAATGGTAGATTAGTAT+TGG - chr8.1:24870039-24870058 None:intergenic 25.0%
! GAACATGAAATTGTTCATTA+GGG + chr8.1:24868764-24868783 MS.gene44433:intron 25.0%
! GAAGAGTAATTATACTCATA+TGG - chr8.1:24870966-24870985 None:intergenic 25.0%
! GATCAAAATGATTGTTTACT+TGG + chr8.1:24867867-24867886 MS.gene44433:intron 25.0%
! TAACTATATAAAGCAGTCAT+GGG + chr8.1:24869190-24869209 MS.gene44433:CDS 25.0%
! TAATATCACAACAATGGAAA+TGG - chr8.1:24871096-24871115 None:intergenic 25.0%
! TACTCGAATTAATAGAAACA+AGG - chr8.1:24867568-24867587 None:intergenic 25.0%
! TATTAATTCGAGTAATCAGT+TGG + chr8.1:24867574-24867593 MS.gene44433:intron 25.0%
! TCAAAGAGAGAAAAACATTA+TGG + chr8.1:24868816-24868835 MS.gene44433:intron 25.0%
! TTAACTATATAAAGCAGTCA+TGG + chr8.1:24869189-24869208 MS.gene44433:CDS 25.0%
! TTCTCTTATAACACTTACTT+CGG - chr8.1:24867272-24867291 None:intergenic 25.0%
!! AATTTGCACCCTTTAAAAAA+GGG + chr8.1:24868022-24868041 MS.gene44433:intron 25.0%
!! ACAAATTTGGAATAATGGTT+AGG - chr8.1:24870523-24870542 None:intergenic 25.0%
!! AGCAACATAATTTTCTCAAA+TGG + chr8.1:24871193-24871212 MS.gene44433:CDS 25.0%
!! ATACTAATCTACCATTTTAG+AGG + chr8.1:24870039-24870058 MS.gene44433:intron 25.0%
!! ATTTCAAGCTTTAATACACA+TGG + chr8.1:24868208-24868227 MS.gene44433:intron 25.0%
!! CAACAAGCAATAATGTTTTA+CGG + chr8.1:24871296-24871315 MS.gene44433:intron 25.0%
!! GGAAATTTACCAAAGAATTT+TGG - chr8.1:24866974-24866993 None:intergenic 25.0%
!! TAATTTGCACCCTTTAAAAA+AGG + chr8.1:24868021-24868040 MS.gene44433:intron 25.0%
!! TCAGTTCTAATTATGTTAAC+TGG + chr8.1:24867314-24867333 MS.gene44433:intron 25.0%
!! TTTCAAGCTTTAATACACAT+GGG + chr8.1:24868209-24868228 MS.gene44433:intron 25.0%
!!! ACATGCAAGAAATCATTTTT+AGG - chr8.1:24870011-24870030 None:intergenic 25.0%
!!! AGTGACAAGATATTTGATTT+TGG + chr8.1:24868533-24868552 MS.gene44433:intron 25.0%
!!! ATATCATTAGTAGGTTGATT+AGG - chr8.1:24870085-24870104 None:intergenic 25.0%
!!! ATATTGTAGCATCGATATTA+TGG + chr8.1:24867354-24867373 MS.gene44433:intron 25.0%
!!! ATCTTTGAACCCTTTTAAAA+GGG + chr8.1:24868642-24868661 MS.gene44433:intron 25.0%
!!! ATTCAGAGATTATTTTGTGA+TGG + chr8.1:24867821-24867840 MS.gene44433:intron 25.0%
!!! ATTTTGGAAATTAAGAGGAT+GGG + chr8.1:24868549-24868568 MS.gene44433:intron 25.0%
!!! CATTTGTTTTTTCGAAAGTT+TGG - chr8.1:24867912-24867931 None:intergenic 25.0%
!!! TAATATGGACCCTTTTAAAA+GGG - chr8.1:24868654-24868673 None:intergenic 25.0%
!!! TTGTTTCTTGCTTTTACAAA+AGG - chr8.1:24869950-24869969 None:intergenic 25.0%
!!! TTTTTAAAGGGTGCAAATTA+GGG - chr8.1:24868021-24868040 None:intergenic 25.0%
!!! TTTTTTAAAGGGTGCAAATT+AGG - chr8.1:24868022-24868041 None:intergenic 25.0%
AAATTCTCTAACCTAGCAAA+GGG - chr8.1:24868192-24868211 None:intergenic 30.0%
AAGTATCCTCATATTGCTAT+TGG + chr8.1:24868953-24868972 MS.gene44433:CDS 30.0%
AATCACACTCCAAAATTCTT+TGG + chr8.1:24866962-24866981 MS.gene44433:CDS 30.0%
ACAATGTCATAGAAAGTTTC+TGG - chr8.1:24869028-24869047 None:intergenic 30.0%
AGAGATTATGATGATAAGAG+TGG - chr8.1:24866918-24866937 None:intergenic 30.0%
AGAGCATAATATCACAACAA+TGG - chr8.1:24871102-24871121 None:intergenic 30.0%
AGCATCATAAAAAACAGTCA+AGG - chr8.1:24869601-24869620 None:intergenic 30.0%
ATAAGAATTCTTCCACGTTA+GGG + chr8.1:24867412-24867431 MS.gene44433:CDS 30.0%
ATGTCTTCAAACTGAAGAAT+TGG - chr8.1:24868998-24869017 None:intergenic 30.0%
CAAAACCATTAAAGCATGTT+TGG - chr8.1:24868719-24868738 None:intergenic 30.0%
CAAACACAACTTTATAGTTC+TGG - chr8.1:24871599-24871618 None:intergenic 30.0%
CATATCCAAACATGCTTTAA+TGG + chr8.1:24868711-24868730 MS.gene44433:intron 30.0%
CGTAAAACATTATTGCTTGT+TGG - chr8.1:24871298-24871317 None:intergenic 30.0%
GAAGGAATTAAATTGTGTTG+TGG + chr8.1:24869877-24869896 MS.gene44433:intron 30.0%
GACTAAGTACTAACATGTTT+AGG + chr8.1:24867845-24867864 MS.gene44433:intron 30.0%
GAGTAATTATACTCATATGG+TGG - chr8.1:24870963-24870982 None:intergenic 30.0%
GTAGTTTAATGCTTAATGTG+AGG + chr8.1:24868786-24868805 MS.gene44433:intron 30.0%
TATAAGAATTCTTCCACGTT+AGG + chr8.1:24867411-24867430 MS.gene44433:CDS 30.0%
TATAGCTGGTTAAATTAGAG+AGG + chr8.1:24868616-24868635 MS.gene44433:intron 30.0%
TCTCTTATAACACTTACTTC+GGG - chr8.1:24867271-24867290 None:intergenic 30.0%
TGATAGAATAGTTAACAGTG+CGG - chr8.1:24869569-24869588 None:intergenic 30.0%
TGCATATAGTTATTTGGCAA+TGG + chr8.1:24869437-24869456 MS.gene44433:CDS 30.0%
TTAAAAGGGTCCATATTAGA+GGG + chr8.1:24868656-24868675 MS.gene44433:intron 30.0%
TTAACTAAAAGGTCCATAGT+CGG - chr8.1:24868049-24868068 None:intergenic 30.0%
TTCTATGACATTGTTTCCAA+TGG + chr8.1:24869034-24869053 MS.gene44433:CDS 30.0%
TTGAAGCACGTAAATCTATA+TGG - chr8.1:24871497-24871516 None:intergenic 30.0%
TTTAAAAGGGTCCATATTAG+AGG + chr8.1:24868655-24868674 MS.gene44433:intron 30.0%
TTTAACGTTGTTCTATTCCT+AGG - chr8.1:24870350-24870369 None:intergenic 30.0%
TTTCCAGTCACATAAATAAC+AGG - chr8.1:24871130-24871149 None:intergenic 30.0%
! AATACTGTAGTAATCCGTTT+TGG - chr8.1:24871032-24871051 None:intergenic 30.0%
! AATTTTCTCAAATGGCCTAT+TGG + chr8.1:24871201-24871220 MS.gene44433:CDS 30.0%
! AGTATCCTCATATTGCTATT+GGG + chr8.1:24868954-24868973 MS.gene44433:CDS 30.0%
! CATCTTTGAACCCTTTTAAA+AGG + chr8.1:24868641-24868660 MS.gene44433:intron 30.0%
! CTAATATGGACCCTTTTAAA+AGG - chr8.1:24868655-24868674 None:intergenic 30.0%
! CTGACAAAATCTGAATGTTT+TGG - chr8.1:24869264-24869283 None:intergenic 30.0%
! GTATGTTTTACGTGATATAG+TGG + chr8.1:24868380-24868399 MS.gene44433:intron 30.0%
! TCAAAACACTGGATTTGTTT+GGG + chr8.1:24867210-24867229 MS.gene44433:CDS 30.0%
! TTAATCTGTAGCCTCTAAAA+TGG - chr8.1:24870053-24870072 None:intergenic 30.0%
! TTAGTTTAACTGCTTGTTGA+AGG + chr8.1:24869373-24869392 MS.gene44433:intron 30.0%
! TTCAAAACATTTAGCTTCTC+CGG - chr8.1:24870737-24870756 None:intergenic 30.0%
! TTGTAACCGGTTTAACTAAA+AGG - chr8.1:24868060-24868079 None:intergenic 30.0%
! TTTACGTGATATAGTGGAAA+CGG + chr8.1:24868386-24868405 MS.gene44433:intron 30.0%
!! AAACGGATTACTACAGTATT+TGG + chr8.1:24871032-24871051 MS.gene44433:CDS 30.0%
!! AGAAGCTAAATGTTTTGAAC+TGG + chr8.1:24870738-24870757 MS.gene44433:CDS 30.0%
!! CATTGTTTCCAATGGTTTTA+AGG + chr8.1:24869042-24869061 MS.gene44433:CDS 30.0%
!! CTTTTAAAAGGGTTCAAAGA+TGG - chr8.1:24868643-24868662 None:intergenic 30.0%
!! GATTTTGGAAATTAAGAGGA+TGG + chr8.1:24868548-24868567 MS.gene44433:intron 30.0%
!! TATGGACCTTTTAGTTAAAC+CGG + chr8.1:24868051-24868070 MS.gene44433:intron 30.0%
!! TTCAGAAAGTATTGTTTCTC+TGG + chr8.1:24871373-24871392 MS.gene44433:CDS 30.0%
!! TTCTTGTTACTGATTTGAAG+CGG + chr8.1:24867472-24867491 MS.gene44433:CDS 30.0%
!! TTTTAAAGGGTGCAAATTAG+GGG - chr8.1:24868020-24868039 None:intergenic 30.0%
!! TTTTTCGAAAGTTTGGTATC+TGG - chr8.1:24867905-24867924 None:intergenic 30.0%
!!! ATGTTTTGGTTAGAAGTTCA+AGG - chr8.1:24869250-24869269 None:intergenic 30.0%
!!! GATTGTTGATGTTAGTTTTC+TGG + chr8.1:24869080-24869099 MS.gene44433:intron 30.0%
!!! TTATGCTGATGTTGTTTTGT+TGG + chr8.1:24868899-24868918 MS.gene44433:intron 30.0%
AAACTTAAAACTCTCGAGGT+AGG + chr8.1:24870367-24870386 MS.gene44433:intron 35.0%
AACTTAAAACTCTCGAGGTA+GGG + chr8.1:24870368-24870387 MS.gene44433:intron 35.0%
AAGAATATCCATCTCACGTT+GGG + chr8.1:24871160-24871179 MS.gene44433:intron 35.0%
AAGATAGTCAGATTCCTTTC+TGG - chr8.1:24870601-24870620 None:intergenic 35.0%
ACCTTATCAACACAGAAAAC+TGG + chr8.1:24867125-24867144 MS.gene44433:CDS 35.0%
ACTGAGATCAAGCTAATACA+AGG + chr8.1:24871555-24871574 MS.gene44433:CDS 35.0%
AGAAAATGATCCTGATTGGT+TGG + chr8.1:24871518-24871537 MS.gene44433:CDS 35.0%
AGATCAAGCTAATACAAGGA+TGG + chr8.1:24871559-24871578 MS.gene44433:CDS 35.0%
ATATCCTTCGTTAGTCAGAT+TGG - chr8.1:24867769-24867788 None:intergenic 35.0%
ATATTTCATGTACCAGCCAA+GGG - chr8.1:24868240-24868259 None:intergenic 35.0%
ATCAAACTAACCTCCTTGAT+AGG - chr8.1:24869510-24869529 None:intergenic 35.0%
ATTACCACAGTAGAGGAAAA+TGG - chr8.1:24867167-24867186 None:intergenic 35.0%
CAACAGAAAATGATCCTGAT+TGG + chr8.1:24871514-24871533 MS.gene44433:CDS 35.0%
CAATAGAAACAAGCTATAGC+TGG + chr8.1:24868602-24868621 MS.gene44433:intron 35.0%
CAATTTGCGGTTTACAATAC+TGG + chr8.1:24869820-24869839 MS.gene44433:intron 35.0%
CACCATTAAAGTCAATTTCC+CGG - chr8.1:24869625-24869644 None:intergenic 35.0%
CATTATGGTAGAAGCTCATA+AGG + chr8.1:24868831-24868850 MS.gene44433:intron 35.0%
CCTTATCAACACAGAAAACT+GGG + chr8.1:24867126-24867145 MS.gene44433:CDS 35.0%
CGAACTTACCTTAAAACCAT+TGG - chr8.1:24869053-24869072 None:intergenic 35.0%
CGTTAAACTTAAAACTCTCG+AGG + chr8.1:24870363-24870382 MS.gene44433:intron 35.0%
CTCTTATAACACTTACTTCG+GGG - chr8.1:24867270-24867289 None:intergenic 35.0%
GAAATTCTCTAACCTAGCAA+AGG - chr8.1:24868193-24868212 None:intergenic 35.0%
GAACAAGCGTTAGAACTTAA+CGG + chr8.1:24868507-24868526 MS.gene44433:intron 35.0%
GCTTCTTCTTTACTTCCAAA+AGG - chr8.1:24867390-24867409 None:intergenic 35.0%
GGAGTCTGCATATAGTTATT+TGG + chr8.1:24869431-24869450 MS.gene44433:CDS 35.0%
GGATTACTACAGTATTTGGA+GGG + chr8.1:24871036-24871055 MS.gene44433:CDS 35.0%
GTAATGAAGGTGACATTGTT+TGG + chr8.1:24867182-24867201 MS.gene44433:CDS 35.0%
GTAGAAAACAGTAGCTATAG+CGG + chr8.1:24869748-24869767 MS.gene44433:intron 35.0%
GTTACATTACCTGTTGTAAC+CGG - chr8.1:24868073-24868092 None:intergenic 35.0%
GTTGTTGGAAGAATTTGGTT+TGG - chr8.1:24867057-24867076 None:intergenic 35.0%
GTTTGCAGAAGGATAGATAA+AGG + chr8.1:24870649-24870668 MS.gene44433:CDS 35.0%
TAATTACTCTTCTTTCCGAG+AGG + chr8.1:24870974-24870993 MS.gene44433:CDS 35.0%
TACTTATCCAGCAACAACTA+AGG - chr8.1:24870828-24870847 None:intergenic 35.0%
TACTTTAACAGGTTTGCAGA+AGG + chr8.1:24870638-24870657 MS.gene44433:intron 35.0%
TATATTTCATGTACCAGCCA+AGG - chr8.1:24868241-24868260 None:intergenic 35.0%
TCAAACTAACCTCCTTGATA+GGG - chr8.1:24869509-24869528 None:intergenic 35.0%
TGTGATTCAATGCAAAAGCT+TGG - chr8.1:24866949-24866968 None:intergenic 35.0%
TTACCACAGTAGAGGAAAAT+GGG - chr8.1:24867166-24867185 None:intergenic 35.0%
TTAGTTAAACCGGTTACAAC+AGG + chr8.1:24868061-24868080 MS.gene44433:intron 35.0%
TTTAAAAAAGGGTCCGACTA+TGG + chr8.1:24868033-24868052 MS.gene44433:intron 35.0%
! ATGTCATAGAAAGTTTCTGG+TGG - chr8.1:24869025-24869044 None:intergenic 35.0%
! CAAGCAATAATGTTTTACGG+TGG + chr8.1:24871299-24871318 MS.gene44433:intron 35.0%
! CCACTATTTTCAGCAATTTG+CGG + chr8.1:24869807-24869826 MS.gene44433:intron 35.0%
! CTAGCAGTGTTGTTAAATAG+TGG + chr8.1:24869652-24869671 MS.gene44433:intron 35.0%
! CTCAAAACACTGGATTTGTT+TGG + chr8.1:24867209-24867228 MS.gene44433:CDS 35.0%
! CTGGTTTCTAGGAATATGTT+TGG + chr8.1:24869839-24869858 MS.gene44433:intron 35.0%
! GTATCCTCATATTGCTATTG+GGG + chr8.1:24868955-24868974 MS.gene44433:CDS 35.0%
! TCACCTGTTATTTATGTGAC+TGG + chr8.1:24871124-24871143 MS.gene44433:intron 35.0%
! TGTTTTTCCTTAGTTGTTGC+TGG + chr8.1:24870818-24870837 MS.gene44433:intron 35.0%
! TTGTATTAGCTTGATCTCAG+TGG - chr8.1:24871556-24871575 None:intergenic 35.0%
!! AATTTGACTTGTCTGTTGCA+TGG + chr8.1:24871430-24871449 MS.gene44433:intron 35.0%
!! GGTTTACAATACTGGTTTCT+AGG + chr8.1:24869828-24869847 MS.gene44433:intron 35.0%
!! TAAAGAGCACTGAAGATCTA+TGG + chr8.1:24869400-24869419 MS.gene44433:CDS 35.0%
!! TGGTCTTTTATCTGACTTGA+AGG + chr8.1:24869859-24869878 MS.gene44433:intron 35.0%
!! TTATAAACCCAAGAGTGCTA+GGG + chr8.1:24870282-24870301 MS.gene44433:intron 35.0%
!!! ACTGTTTTTTATGATGCTGC+CGG + chr8.1:24869603-24869622 MS.gene44433:intron 35.0%
!!! ATAGTCGGACCCTTTTTTAA+AGG - chr8.1:24868034-24868053 None:intergenic 35.0%
!!! TAGTCGGACCCTTTTTTAAA+GGG - chr8.1:24868033-24868052 None:intergenic 35.0%
AATTCTTGAGGCAATCCTCT+CGG - chr8.1:24870992-24871011 None:intergenic 40.0%
ACACCATGGACAAGAAAAGA+TGG - chr8.1:24870884-24870903 None:intergenic 40.0%
ACTAATTTCAGTGCACGTCA+AGG - chr8.1:24868358-24868377 None:intergenic 40.0%
AGAATATCCATCTCACGTTG+GGG + chr8.1:24871161-24871180 MS.gene44433:intron 40.0%
AGCATTAAGATACCCTAACG+TGG - chr8.1:24867427-24867446 None:intergenic 40.0%
ATCAAGAACTCAGAAGGGTA+TGG - chr8.1:24869471-24869490 None:intergenic 40.0%
ATGGGATGACATAGAATCGA+AGG + chr8.1:24869208-24869227 MS.gene44433:CDS 40.0%
CCGCAAATTGCTGAAAATAG+TGG - chr8.1:24869810-24869829 None:intergenic 40.0%
CGGATTACTACAGTATTTGG+AGG + chr8.1:24871035-24871054 MS.gene44433:CDS 40.0%
CGGTCTTGAAAAAGTTGAAG+TGG - chr8.1:24867087-24867106 None:intergenic 40.0%
CGTTGTTCTATTCCTAGGAT+TGG - chr8.1:24870345-24870364 None:intergenic 40.0%
CTAGCACTCTTGGGTTTATA+AGG - chr8.1:24870283-24870302 None:intergenic 40.0%
CTAGGATTGGATTTGAATGC+AGG - chr8.1:24870332-24870351 None:intergenic 40.0%
CTGCATTCAAATCCAATCCT+AGG + chr8.1:24870330-24870349 MS.gene44433:intron 40.0%
GAAGAATATCCATCTCACGT+TGG + chr8.1:24871159-24871178 MS.gene44433:intron 40.0%
GAGGATTGCCTCAAGAATTA+CGG + chr8.1:24870993-24871012 MS.gene44433:CDS 40.0%
GAGTCGTTGTTGGAAGAATT+TGG - chr8.1:24867062-24867081 None:intergenic 40.0%
GATCCTCCAAATAAGACAAC+AGG - chr8.1:24867519-24867538 None:intergenic 40.0%
GTGGAAACATGCTGAACTTT+CGG - chr8.1:24870944-24870963 None:intergenic 40.0%
GTGTAAGACAGAAAAGTTCG+AGG + chr8.1:24867706-24867725 MS.gene44433:intron 40.0%
GTTTATCAGTGTTAGCAGCA+TGG + chr8.1:24868921-24868940 MS.gene44433:intron 40.0%
TAGTGGCTATAGCAGTGTTA+TGG + chr8.1:24869669-24869688 MS.gene44433:intron 40.0%
TGAAATACACAGACGAGACA+AGG + chr8.1:24867743-24867762 MS.gene44433:intron 40.0%
TGAAGATCTATGGAACTGGT+TGG + chr8.1:24869410-24869429 MS.gene44433:CDS 40.0%
TGCACAGGAAATAAGGAACA+GGG + chr8.1:24868573-24868592 MS.gene44433:intron 40.0%
TGCACGTCAAGGTTTAAACT+TGG - chr8.1:24868347-24868366 None:intergenic 40.0%
TGGGATGACATAGAATCGAA+GGG + chr8.1:24869209-24869228 MS.gene44433:CDS 40.0%
TTATTTGGAGGATCCTATGG+TGG + chr8.1:24867525-24867544 MS.gene44433:CDS 40.0%
TTCCTATTCGAAGTCCAGAA+AGG + chr8.1:24870584-24870603 MS.gene44433:intron 40.0%
TTCCTTTCTGGACTTCGAAT+AGG - chr8.1:24870589-24870608 None:intergenic 40.0%
! AAGAGTGGAAATGAGTGTTG+TGG - chr8.1:24866903-24866922 None:intergenic 40.0%
! AAGGCATCAAGAACTCAGAA+GGG - chr8.1:24869476-24869495 None:intergenic 40.0%
! CGGGAAATTGACTTTAATGG+TGG + chr8.1:24869623-24869642 MS.gene44433:intron 40.0%
! GCTTCTCCTGTTGTCTTATT+TGG + chr8.1:24867510-24867529 MS.gene44433:CDS 40.0%
! TAAGACAACAGGAGAAGCAT+TGG - chr8.1:24867508-24867527 None:intergenic 40.0%
! TCAAGAACTCAGAAGGGTAT+GGG - chr8.1:24869470-24869489 None:intergenic 40.0%
! TCTTTTCTTGTCCATGGTGT+AGG + chr8.1:24870884-24870903 MS.gene44433:intron 40.0%
! TGCCGGGAAATTGACTTTAA+TGG + chr8.1:24869620-24869639 MS.gene44433:intron 40.0%
! TGTTGATAAGGTAGCGTTGA+GGG - chr8.1:24867117-24867136 None:intergenic 40.0%
! TTCCTCTACTGTGGTAATGA+AGG + chr8.1:24867169-24867188 MS.gene44433:CDS 40.0%
!! AAAGGCATCAAGAACTCAGA+AGG - chr8.1:24869477-24869496 None:intergenic 40.0%
!! AATCAGTTGGTTTGATGCCT+AGG + chr8.1:24867587-24867606 MS.gene44433:intron 40.0%
!! CCCAGTTTTCTGTGTTGATA+AGG - chr8.1:24867129-24867148 None:intergenic 40.0%
!! CTTATAAACCCAAGAGTGCT+AGG + chr8.1:24870281-24870300 MS.gene44433:intron 40.0%
!! GGAAGAATTTGGTTTGGTAG+TGG - chr8.1:24867051-24867070 None:intergenic 40.0%
!! GTCTTATTTGGAGGATCCTA+TGG + chr8.1:24867522-24867541 MS.gene44433:CDS 40.0%
!! TCTCCTGTTGTCTTATTTGG+AGG + chr8.1:24867513-24867532 MS.gene44433:CDS 40.0%
!! TGATTGGTTGGTAGAGCAAA+GGG + chr8.1:24871530-24871549 MS.gene44433:CDS 40.0%
!! TGGTAGTGGATATCCAATTG+TGG - chr8.1:24867037-24867056 None:intergenic 40.0%
!!! CTGTTTTTTATGATGCTGCC+GGG + chr8.1:24869604-24869623 MS.gene44433:intron 40.0%
AACACAGAAAACTGGGTCGT+TGG + chr8.1:24867133-24867152 MS.gene44433:CDS 45.0%
AACTTTCGGCTGCTAGACAT+CGG - chr8.1:24870930-24870949 None:intergenic 45.0%
AAGGCCAATCTGACTAACGA+AGG + chr8.1:24867762-24867781 MS.gene44433:intron 45.0%
ACCTAGCAAAGGGAAAGTTG+AGG - chr8.1:24868182-24868201 None:intergenic 45.0%
AGAAAACTGGGTCGTTGGAT+CGG + chr8.1:24867138-24867157 MS.gene44433:CDS 45.0%
AGAATTACGGAGTGAAGCCA+AGG + chr8.1:24871006-24871025 MS.gene44433:CDS 45.0%
AGCAAAGGGAAAGTTGAGGA+CGG - chr8.1:24868178-24868197 None:intergenic 45.0%
AGTGCCCCAATAGCAATATG+AGG - chr8.1:24868962-24868981 None:intergenic 45.0%
ATAAAGATCGCAGTGCAGCA+GGG - chr8.1:24868153-24868172 None:intergenic 45.0%
ATACACATGGGTACATCCCT+TGG + chr8.1:24868221-24868240 MS.gene44433:intron 45.0%
ATTCTCCTGCACTGAGCAAA+GGG - chr8.1:24868129-24868148 None:intergenic 45.0%
CAAATGGCCTATTGGATCCA+TGG + chr8.1:24871209-24871228 MS.gene44433:CDS 45.0%
CAAATTTCCCCAACGTGAGA+TGG - chr8.1:24871171-24871190 None:intergenic 45.0%
CACCTTCATTACCACAGTAG+AGG - chr8.1:24867174-24867193 None:intergenic 45.0%
CATCTCACGTTGGGGAAATT+TGG + chr8.1:24871169-24871188 MS.gene44433:CDS 45.0%
CTGCACAGGAAATAAGGAAC+AGG + chr8.1:24868572-24868591 MS.gene44433:intron 45.0%
CTTTGCTCTACCAACCAATC+AGG - chr8.1:24871531-24871550 None:intergenic 45.0%
GAACTGGATGATGATCCTCA+TGG + chr8.1:24870754-24870773 MS.gene44433:CDS 45.0%
GCACTGAAGATCTATGGAAC+TGG + chr8.1:24869406-24869425 MS.gene44433:CDS 45.0%
GCTTCACTCCGTAATTCTTG+AGG - chr8.1:24871004-24871023 None:intergenic 45.0%
GTTAATCCCTCAAGTCAGGT+AGG - chr8.1:24870412-24870431 None:intergenic 45.0%
GTTTCTCTGGTGACTGAAGA+AGG + chr8.1:24871386-24871405 MS.gene44433:CDS 45.0%
TATTCTCCTGCACTGAGCAA+AGG - chr8.1:24868130-24868149 None:intergenic 45.0%
TCCTCAACTTTCCCTTTGCT+AGG + chr8.1:24868178-24868197 MS.gene44433:intron 45.0%
TCGAAGGGTCAAACAAGTGA+TGG + chr8.1:24869224-24869243 MS.gene44433:CDS 45.0%
TCTGAGTGGTTGGAACTTTC+AGG + chr8.1:24870777-24870796 MS.gene44433:CDS 45.0%
TGACAATGTCTCACACACCT+AGG - chr8.1:24867607-24867626 None:intergenic 45.0%
TGGGAAATTGCTCCCAAGTT+CGG + chr8.1:24867229-24867248 MS.gene44433:CDS 45.0%
TTGTCCTTGACAAAGCTTGC+AGG + chr8.1:24869972-24869991 MS.gene44433:intron 45.0%
! GTGTTGATAAGGTAGCGTTG+AGG - chr8.1:24867118-24867137 None:intergenic 45.0%
! GTTATGGCTCTATAGCGTAG+CGG + chr8.1:24869685-24869704 MS.gene44433:intron 45.0%
! GTTTGGTTCGCTCAAAACAC+TGG + chr8.1:24867199-24867218 MS.gene44433:CDS 45.0%
! TATGGTGAGTCTGTGCCTTT+TGG + chr8.1:24867372-24867391 MS.gene44433:CDS 45.0%
! TTGTCCTGCAAGCTTTGTCA+AGG - chr8.1:24869979-24869998 None:intergenic 45.0%
!! ATTCTGGAGCGCATATACGA+GGG + chr8.1:24870688-24870707 MS.gene44433:CDS 45.0%
!! CTGATTGGTTGGTAGAGCAA+AGG + chr8.1:24871529-24871548 MS.gene44433:CDS 45.0%
!! GTAGTAATCCGTTTTGGCCT+TGG - chr8.1:24871026-24871045 None:intergenic 45.0%
!! TATTCTGGAGCGCATATACG+AGG + chr8.1:24870687-24870706 MS.gene44433:CDS 45.0%
!!! TTTTTTTATTATTTAAAGTT+GGG - chr8.1:24868686-24868705 None:intergenic 5.0%
!!! TTTTTTTTATTATTTAAAGT+TGG - chr8.1:24868687-24868706 None:intergenic 5.0%
AGGATAGATAAAGGCCCTGC+TGG + chr8.1:24870658-24870677 MS.gene44433:CDS 50.0%
AGGTAGGGTTATGCGCTCAT+TGG + chr8.1:24870383-24870402 MS.gene44433:intron 50.0%
AGTGCTAGGGTGAGATGGTT+CGG + chr8.1:24870295-24870314 MS.gene44433:intron 50.0%
ATCCTCATGGTCTGAGTGGT+TGG + chr8.1:24870767-24870786 MS.gene44433:CDS 50.0%
ATTAACCTCGTGTGCGCGAA+AGG + chr8.1:24870426-24870445 MS.gene44433:intron 50.0%
CACCACTCCATGGATCCAAT+AGG - chr8.1:24871219-24871238 None:intergenic 50.0%
CATCTCACCCTAGCACTCTT+GGG - chr8.1:24870292-24870311 None:intergenic 50.0%
CCAGAATACTAGTCCCAGCA+GGG - chr8.1:24870675-24870694 None:intergenic 50.0%
CGAGGTTAATCCCTCAAGTC+AGG - chr8.1:24870416-24870435 None:intergenic 50.0%
CTAGACCTGTGACTACGTGA+AGG - chr8.1:24869904-24869923 None:intergenic 50.0%
CTATTGGATCCATGGAGTGG+TGG + chr8.1:24871217-24871236 MS.gene44433:CDS 50.0%
CTGTGACTGTGACTGTGACT+GGG - chr8.1:24867014-24867033 None:intergenic 50.0%
GAAAACTGGGTCGTTGGATC+GGG + chr8.1:24867139-24867158 MS.gene44433:CDS 50.0%
GAGCGTCTTACTTCCACCAT+AGG - chr8.1:24867541-24867560 None:intergenic 50.0%
GAGTGAAGCCAAGGCCAAAA+CGG + chr8.1:24871015-24871034 MS.gene44433:CDS 50.0%
GAGTTCTTGATGCCTTTGCC+TGG + chr8.1:24869480-24869499 MS.gene44433:CDS 50.0%
GATAAAGATCGCAGTGCAGC+AGG - chr8.1:24868154-24868173 None:intergenic 50.0%
GATGATCCTCATGGTCTGAG+TGG + chr8.1:24870763-24870782 MS.gene44433:CDS 50.0%
GGATAGATAAAGGCCCTGCT+GGG + chr8.1:24870659-24870678 MS.gene44433:CDS 50.0%
GGTAGGGTTATGCGCTCATT+GGG + chr8.1:24870384-24870403 MS.gene44433:intron 50.0%
GGTGTAGGCATGCACTGAAA+TGG + chr8.1:24870899-24870918 MS.gene44433:intron 50.0%
GTAGGGTTATGCGCTCATTG+GGG + chr8.1:24870385-24870404 MS.gene44433:intron 50.0%
GTCACAGTCACAGCCACAAT+TGG + chr8.1:24867021-24867040 MS.gene44433:CDS 50.0%
GTTAACAGTGCGGCTGAGTT+AGG - chr8.1:24869559-24869578 None:intergenic 50.0%
GTTGGGTGGTCCCTCTAATA+TGG - chr8.1:24868669-24868688 None:intergenic 50.0%
TACTTCGGGGAAAACGACCA+TGG - chr8.1:24867257-24867276 None:intergenic 50.0%
TCCAGAATACTAGTCCCAGC+AGG - chr8.1:24870676-24870695 None:intergenic 50.0%
TGAAGTGGTCGAGTCGTTGT+TGG - chr8.1:24867072-24867091 None:intergenic 50.0%
TTCAGTGCATGCCTACACCA+TGG - chr8.1:24870898-24870917 None:intergenic 50.0%
TTCCAACCACTCAGACCATG+AGG - chr8.1:24870772-24870791 None:intergenic 50.0%
TTCTCCTGCACTGAGCAAAG+GGG - chr8.1:24868128-24868147 None:intergenic 50.0%
TTTGCCTGGACACCCTATCA+AGG + chr8.1:24869494-24869513 MS.gene44433:CDS 50.0%
! GGTCCCATTTTCCTCTACTG+TGG + chr8.1:24867160-24867179 MS.gene44433:CDS 50.0%
! TGAGATGGTTCGGGTCTCTT+AGG + chr8.1:24870305-24870324 MS.gene44433:intron 50.0%
! TGGGAGGGTTTGGTTGAAGA+TGG - chr8.1:24866995-24867014 None:intergenic 50.0%
! TTGATAGGGTGTCCAGGCAA+AGG - chr8.1:24869495-24869514 None:intergenic 50.0%
!! ATTAAGAGGATGGGCTGCAC+AGG + chr8.1:24868558-24868577 MS.gene44433:intron 50.0%
!! GATGGGCTGCACAGGAAATA+AGG + chr8.1:24868566-24868585 MS.gene44433:intron 50.0%
!! TTCTGGAGCGCATATACGAG+GGG + chr8.1:24870689-24870708 MS.gene44433:CDS 50.0%
AACGACCATGGCTCCGAACT+TGG - chr8.1:24867245-24867264 None:intergenic 55.0%
ACATGGGTACATCCCTTGGC+TGG + chr8.1:24868225-24868244 MS.gene44433:intron 55.0%
ACGACCATGGCTCCGAACTT+GGG - chr8.1:24867244-24867263 None:intergenic 55.0%
CCATCTCACCCTAGCACTCT+TGG - chr8.1:24870293-24870312 None:intergenic 55.0%
CGTAGTCACAGGTCTAGACG+TGG + chr8.1:24869907-24869926 MS.gene44433:intron 55.0%
GACTGTGACTGTGACTGGGA+GGG - chr8.1:24867010-24867029 None:intergenic 55.0%
GCTGTGACTGTGACTGTGAC+TGG - chr8.1:24867015-24867034 None:intergenic 55.0%
GGCCTATTGGATCCATGGAG+TGG + chr8.1:24871214-24871233 MS.gene44433:CDS 55.0%
GTGCTAGGGTGAGATGGTTC+GGG + chr8.1:24870296-24870315 MS.gene44433:intron 55.0%
GTGGACCTTCACGTAGTCAC+AGG + chr8.1:24869896-24869915 MS.gene44433:intron 55.0%
TATCACCTGCCACCACTCCA+TGG - chr8.1:24871229-24871248 None:intergenic 55.0%
TGACTGTGACTGGGAGGGTT+TGG - chr8.1:24867005-24867024 None:intergenic 55.0%
TGACTGTGACTGTGACTGGG+AGG - chr8.1:24867011-24867030 None:intergenic 55.0%
! ACCTCCTTGATAGGGTGTCC+AGG - chr8.1:24869501-24869520 None:intergenic 55.0%
! CCCTGCTGGGACTAGTATTC+TGG + chr8.1:24870672-24870691 MS.gene44433:CDS 55.0%
! GTAGCGTTGAGGGAACGTAG+CGG - chr8.1:24867107-24867126 None:intergenic 55.0%
! TCTGGAGCGCATATACGAGG+GGG + chr8.1:24870690-24870709 MS.gene44433:CDS 55.0%
! TGGGGTCCTACCTGACTTGA+GGG + chr8.1:24870403-24870422 MS.gene44433:intron 55.0%
! TTGGGGTCCTACCTGACTTG+AGG + chr8.1:24870402-24870421 MS.gene44433:intron 55.0%
!! CCAAGAGTGCTAGGGTGAGA+TGG + chr8.1:24870290-24870309 MS.gene44433:intron 55.0%
GCCTGGACACCCTATCAAGG+AGG + chr8.1:24869497-24869516 MS.gene44433:CDS 60.0%
GGATACCTTTCGCGCACACG+AGG - chr8.1:24870434-24870453 None:intergenic 60.0%
GGCGTTGCAGCACTGTTGTG+TGG + chr8.1:24869769-24869788 MS.gene44433:intron 60.0%
TGCTCCCAAGTTCGGAGCCA+TGG + chr8.1:24867237-24867256 MS.gene44433:CDS 60.0%
TGGATCCATGGAGTGGTGGC+AGG + chr8.1:24871221-24871240 MS.gene44433:CDS 60.0%
TTGGCCCCTTTGCTCAGTGC+AGG + chr8.1:24868121-24868140 MS.gene44433:intron 60.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 24866881 24871626 24866881 ID=MS.gene44433
chr8.1 mRNA 24866881 24871626 24866881 ID=MS.gene44433.t1;Parent=MS.gene44433
chr8.1 exon 24866881 24867273 24866881 ID=MS.gene44433.t1.exon1;Parent=MS.gene44433.t1
chr8.1 CDS 24866881 24867273 24866881 ID=cds.MS.gene44433.t1;Parent=MS.gene44433.t1
chr8.1 exon 24867363 24867549 24867363 ID=MS.gene44433.t1.exon2;Parent=MS.gene44433.t1
chr8.1 CDS 24867363 24867549 24867363 ID=cds.MS.gene44433.t1;Parent=MS.gene44433.t1
chr8.1 exon 24868930 24869063 24868930 ID=MS.gene44433.t1.exon3;Parent=MS.gene44433.t1
chr8.1 CDS 24868930 24869063 24868930 ID=cds.MS.gene44433.t1;Parent=MS.gene44433.t1
chr8.1 exon 24869170 24869282 24869170 ID=MS.gene44433.t1.exon4;Parent=MS.gene44433.t1
chr8.1 CDS 24869170 24869282 24869170 ID=cds.MS.gene44433.t1;Parent=MS.gene44433.t1
chr8.1 exon 24869395 24869518 24869395 ID=MS.gene44433.t1.exon5;Parent=MS.gene44433.t1
chr8.1 CDS 24869395 24869518 24869395 ID=cds.MS.gene44433.t1;Parent=MS.gene44433.t1
chr8.1 exon 24870649 24870798 24870649 ID=MS.gene44433.t1.exon6;Parent=MS.gene44433.t1
chr8.1 CDS 24870649 24870798 24870649 ID=cds.MS.gene44433.t1;Parent=MS.gene44433.t1
chr8.1 exon 24870906 24871061 24870906 ID=MS.gene44433.t1.exon7;Parent=MS.gene44433.t1
chr8.1 CDS 24870906 24871061 24870906 ID=cds.MS.gene44433.t1;Parent=MS.gene44433.t1
chr8.1 exon 24871163 24871242 24871163 ID=MS.gene44433.t1.exon8;Parent=MS.gene44433.t1
chr8.1 CDS 24871163 24871242 24871163 ID=cds.MS.gene44433.t1;Parent=MS.gene44433.t1
chr8.1 exon 24871358 24871407 24871358 ID=MS.gene44433.t1.exon9;Parent=MS.gene44433.t1
chr8.1 CDS 24871358 24871407 24871358 ID=cds.MS.gene44433.t1;Parent=MS.gene44433.t1
chr8.1 exon 24871487 24871626 24871487 ID=MS.gene44433.t1.exon10;Parent=MS.gene44433.t1
chr8.1 CDS 24871487 24871626 24871487 ID=cds.MS.gene44433.t1;Parent=MS.gene44433.t1
Gene Sequence

>MS.gene44433

ATGGCAACAAAAATCTTCACCACAACACTCATTTCCACTCTTATCATCATAATCTCTTCTTCACACCAAGCTTTTGCATTGAATCACACTCCAAAATTCTTTGGTAAATTTCCATCTTCAACCAAACCCTCCCAGTCACAGTCACAGTCACAGCCACAATTGGATATCCACTACCAAACCAAATTCTTCCAACAACGACTCGACCACTTCAACTTTTTCAAGACCGCTACGTTCCCTCAACGCTACCTTATCAACACAGAAAACTGGGTCGTTGGATCGGGTCCCATTTTCCTCTACTGTGGTAATGAAGGTGACATTGTTTGGTTCGCTCAAAACACTGGATTTGTTTGGGAAATTGCTCCCAAGTTCGGAGCCATGGTCGTTTTCCCCGAAGTAAGTGTTATAAGAGAAAGTTGAGTCAACAAAAGTATTATCAGTTCTAATTATGTTAACTGGTTTTTTTTTTATTTTAAATATTGTAGCATCGATATTATGGTGAGTCTGTGCCTTTTGGAAGTAAAGAAGAAGCTTATAAGAATTCTTCCACGTTAGGGTATCTTAATGCTCAGCAAGCTCTCTTTGATTTCGCTGTTCTTGTTACTGATTTGAAGCGGAATTATTCTGCCAATGCTTCTCCTGTTGTCTTATTTGGAGGATCCTATGGTGGAAGTAAGACGCTCTTTACCTTGTTTCTATTAATTCGAGTAATCAGTTGGTTTGATGCCTAGGTGTGTGAGACATTGTCACTAGTCTTTTAATGTATCGAAATTAAAATGATATTTTAGCTTTGTTTTTCGTTAGTAATTGTATAGAACAGATTGACTAGTGTAAGACAGAAAAGTTCGAGGACAAAAGTAATTAATGAAATACACAGACGAGACAAGGCCAATCTGACTAACGAAGGATATATCTAAGTAGTATGTTTTTGTAATTTTGATATATTCAGAGATTATTTTGTGATGGCGACTAAGTACTAACATGTTTAGGATCAAAATGATTGTTTACTTGGTCGTTCTTTAGACCAGATACCAAACTTTCGAAAAAACAAATGATTGTTTACTCTATTAAGTTATTTTCTCTTCGAAAATATTATGAATCTATGATCAAAATGTTGCAACAATACAACTTTAAGAGTGCCCCTAATTTGCACCCTTTAAAAAAGGGTCCGACTATGGACCTTTTAGTTAAACCGGTTACAACAGGTAATGTAACCGAGTGATAAAAATTAAAACTAAAAATGTTGGCCCCTTTGCTCAGTGCAGGAGAATACCCTGCTGCACTGCGATCTTTATCACCGTCCTCAACTTTCCCTTTGCTAGGTTAGAGAATTTCAAGCTTTAATACACATGGGTACATCCCTTGGCTGGTACATGAAATATATATGTAGACTACTTTTGTTAACTACTTATCTTGTAGCATTATTTGCAATGCATTCATTACTTTGCTCTTTTTATTTTATTTTTCCAAGTTTAAACCTTGACGTGCACTGAAATTAGTTTGTATGTTTTACGTGATATAGTGGAAACGGTCACAATAGCATGTTTGATTTCAAAAATGAAAGGTCGTAAATCACTTTTGTGAGTTTTTATCAAATCTAATTTATATAGTTTATAGCAGAAATCAAATGAACAAGCGTTAGAACTTAACGGTTAAGTGACAAGATATTTGATTTTGGAAATTAAGAGGATGGGCTGCACAGGAAATAAGGAACAGGGAAGAAGCAATAGAAACAAGCTATAGCTGGTTAAATTAGAGAGGTCCATCTTTGAACCCTTTTAAAAGGGTCCATATTAGAGGGACCACCCAACTTTAAATAATAAAAAAAAATTGCATATCCAAACATGCTTTAATGGTTTTGAATTGATATTGTGAAATGTTCATAAGAACATGAAATTGTTCATTAGGGTAGTTTAATGCTTAATGTGAGGTGCTGCTTCAAAGAGAGAAAAACATTATGGTAGAAGCTCATAAGGTGTTCAGTCTTTTAATTTGATGAAAATTTGCTTATTGTTATGAATTTATGCTGATGTTGTTTTGTTGGTTTATCAGTGTTAGCAGCATGGATGAGACTTAAGTATCCTCATATTGCTATTGGGGCACTAGCATCTTCAGCTCCAATTCTTCAGTTTGAAGACATTGTGCCACCAGAAACTTTCTATGACATTGTTTCCAATGGTTTTAAGGTAAGTTCGTCTGTGAGATTGTTGATGTTAGTTTTCTGGTATTTATACATGCTATGTTATAAATATAATTAGTATACTAACAATTTTACTCTCTTTGCATCAATAGCGTGAAAGTTCATCTTGCTTTAACTATATAAAGCAGTCATGGGATGACATAGAATCGAAGGGTCAAACAAGTGATGGCCTTGAACTTCTAACCAAAACATTCAGATTTTGTCAGTAAGACATTTTTTCTAAGAAATGTGTATTTATGTCTGCATTACATGATAGTGCTAATATCAGTATTTTTATTATTTCTACTCTGTTGATTTAGTTTAACTGCTTGTTGAAGGAAATTAAAGAGCACTGAAGATCTATGGAACTGGTTGGAGTCTGCATATAGTTATTTGGCAATGGTTAACTACCCATACCCTTCTGAGTTCTTGATGCCTTTGCCTGGACACCCTATCAAGGAGGTTAGTTTGATTTCATAACATTCTATGATCTTGTTTTCCTAACTCAGCCGCACTGTTAACTATTCTATCATCACAATTTCCTTGACTGTTTTTTATGATGCTGCCGGGAAATTGACTTTAATGGTGGATGTTTCTAGCAGTGTTGTTAAATAGTGGCTATAGCAGTGTTATGGCTCTATAGCGTAGCGGAATTTGCACAAGTTGCTATTGTTATGTAATATGCTGTTTAGTAGAAAACAGTAGCTATAGCGGCGTTGCAGCACTGTTGTGTGGCAAAATGTAATCAAACCACTATTTTCAGCAATTTGCGGTTTACAATACTGGTTTCTAGGAATATGTTTGGTCTTTTATCTGACTTGAAGGAATTAAATTGTGTTGTGGACCTTCACGTAGTCACAGGTCTAGACGTGGTAGAATCTTTCTTTCAACCTTTTGTAAAAGCAAGAAACAAATTTGTCCTTGACAAAGCTTGCAGGACAAACAGATTTTCCTAAAAATGATTTCTTGCATGTTTTTTCCAATACTAATCTACCATTTTAGAGGCTACAGATTAATGAAGAGTTCCTAATCAACCTACTAATGATATTTTTTTTATGATCTTATCAAGATAATGAAATTAAAATACTAAATCAATTGATAAGGATTCTGTTATGCAGAATTAAAATACTAAATCAAAACAACTACTGATAATGATTCTGTAATGCAGAATCACATCAAGATAAAGAAACTTTAAATTCAAAATTTAAAAGAGATAAATTAATCCTTATAAACCCAAGAGTGCTAGGGTGAGATGGTTCGGGTCTCTTAGGTCCTGCATTCAAATCCAATCCTAGGAATAGAACAACGTTAAACTTAAAACTCTCGAGGTAGGGTTATGCGCTCATTGGGGTCCTACCTGACTTGAGGGATTAACCTCGTGTGCGCGAAAGGTATCCAGTTTACACTAAAAAAAAGTAATTAAGCAAATCCTAATTAACGGAAATTAAAAATGATGAAATAATCCTAACCATTATTCCAAATTTGTTTTCTTCTTCTTTCTTTGTTGCTATTGACATGTCAGATTGTTTCCTATTCGAAGTCCAGAAAGGAATCTGACTATCTTTGCTAATCTTATATATATACTTTAACAGGTTTGCAGAAGGATAGATAAAGGCCCTGCTGGGACTAGTATTCTGGAGCGCATATACGAGGGGGTGAATGTCTACTACAATTATACCGGAGAAGCTAAATGTTTTGAACTGGATGATGATCCTCATGGTCTGAGTGGTTGGAACTTTCAGGTTTACCATACTTAAATTTTGTTTTTCCTTAGTTGTTGCTGGATAAGTATTTATGCCAAATAGCATTAACCTTTGATTCATTCCATCTTTTCTTGTCCATGGTGTAGGCATGCACTGAAATGGTTATGCCGATGTCTAGCAGCCGAAAGTTCAGCATGTTTCCACCATATGAGTATAATTACTCTTCTTTCCGAGAGGATTGCCTCAAGAATTACGGAGTGAAGCCAAGGCCAAAACGGATTACTACAGTATTTGGAGGGCATGTAAGAGAATATTTACAACTGAATCTTATTTCCATTTCCATTGTTGTGATATTATGCTCTTTTCACCTGTTATTTATGTGACTGGAAATATTGTTTTGAAGAATATCCATCTCACGTTGGGGAAATTTGGAAGCAACATAATTTTCTCAAATGGCCTATTGGATCCATGGAGTGGTGGCAGGTGATATATTATTTATTCTGCCAATATCTTTGTTATATTGTTTTATGTTTTTCCAACAAGCAATAATGTTTTACGGTGGTGTCAAATTCTGATATTCAAATTGTTTTCATTGCAGTGTTTTGCAAAATATTTCAGAAAGTATTGTTTCTCTGGTGACTGAAGAAGGTAAAACCATTTGATTATTCATAATTTGACTTGTCTGTTGCATGGATTCTATATTGATTTTTTCATCTTATATTCTCAGGTGCACACCATATAGATTTACGTGCTTCAACAGAAAATGATCCTGATTGGTTGGTAGAGCAAAGGGCCACTGAGATCAAGCTAATACAAGGATGGATCAGTGACTATTACCAGAACTATAAAGTTGTGTTTGATATGTAA

Protein sequence

>MS.gene44433.t1

MATKIFTTTLISTLIIIISSSHQAFALNHTPKFFGKFPSSTKPSQSQSQSQPQLDIHYQTKFFQQRLDHFNFFKTATFPQRYLINTENWVVGSGPIFLYCGNEGDIVWFAQNTGFVWEIAPKFGAMVVFPEHRYYGESVPFGSKEEAYKNSSTLGYLNAQQALFDFAVLVTDLKRNYSANASPVVLFGGSYGGMLAAWMRLKYPHIAIGALASSAPILQFEDIVPPETFYDIVSNGFKRESSSCFNYIKQSWDDIESKGQTSDGLELLTKTFRFCQKLKSTEDLWNWLESAYSYLAMVNYPYPSEFLMPLPGHPIKEVCRRIDKGPAGTSILERIYEGVNVYYNYTGEAKCFELDDDPHGLSGWNFQACTEMVMPMSSSRKFSMFPPYEYNYSSFREDCLKNYGVKPRPKRITTVFGGHNIHLTLGKFGSNIIFSNGLLDPWSGGSVLQNISESIVSLVTEEGAHHIDLRASTENDPDWLVEQRATEIKLIQGWISDYYQNYKVVFDM