Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027504.t1 | XP_003613417.1 | 97.7 | 524 | 10 | 1 | 1 | 524 | 1 | 522 | 0.00E+00 | 1089.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027504.t1 | G7K5L2 | 97.7 | 524 | 10 | 1 | 1 | 524 | 1 | 522 | 0.0e+00 | 1089.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene062320 | MS.gene027504 | PPI |
| MS.gene030088 | MS.gene027504 | PPI |
| MS.gene017160 | MS.gene027504 | PPI |
| MS.gene038392 | MS.gene027504 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027504.t1 | MTR_5g036420 | 97.710 | 524 | 10 | 1 | 1 | 524 | 1 | 522 | 0.0 | 1068 |
| MS.gene027504.t1 | MTR_5g092140 | 65.201 | 523 | 172 | 5 | 8 | 524 | 7 | 525 | 0.0 | 729 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027504.t1 | AT1G70160 | 81.028 | 506 | 92 | 3 | 20 | 524 | 21 | 523 | 0.0 | 868 |
| MS.gene027504.t1 | AT4G27020 | 68.056 | 504 | 155 | 4 | 23 | 524 | 24 | 523 | 0.0 | 748 |
| MS.gene027504.t1 | AT5G54870 | 66.206 | 506 | 165 | 4 | 21 | 524 | 30 | 531 | 0.0 | 732 |
| MS.gene027504.t1 | AT5G54870 | 69.647 | 425 | 127 | 2 | 102 | 524 | 1 | 425 | 0.0 | 654 |
Find 141 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTTTAGGAACTCTAAAT+TGG | 0.173776 | 5.4:-25887564 | None:intergenic |
| AATTTGTGGGTTGGTGAATC+TGG | 0.215887 | 5.4:+25887779 | MS.gene027504:CDS |
| CTTCCATTCTGCCAGATTCT+TGG | 0.228281 | 5.4:+25890072 | MS.gene027504:CDS |
| CATGGTGGCGGTGGTGATTC+TGG | 0.240921 | 5.4:+25886234 | MS.gene027504:CDS |
| TTGCTCCCATGTGTTTCTTT+AGG | 0.246809 | 5.4:-25887577 | None:intergenic |
| CGATAGGCCTTCACAATGTT+AGG | 0.317578 | 5.4:+25890182 | MS.gene027504:CDS |
| GGCGGTGGTGATTCTGGTTT+GGG | 0.321629 | 5.4:+25886240 | MS.gene027504:CDS |
| TGTCGAAAATCCGCGGTAGA+TGG | 0.325296 | 5.4:+25887675 | MS.gene027504:CDS |
| TAGAGTAAACGATGTGTTAC+CGG | 0.347530 | 5.4:+25886050 | MS.gene027504:CDS |
| TGAATAGAACCATTATTATA+CGG | 0.354003 | 5.4:-25886159 | None:intergenic |
| GATCCTGCAGATGTTCATTC+TGG | 0.368715 | 5.4:+25887638 | MS.gene027504:CDS |
| TACTTGAATGGAGCTAGAAA+TGG | 0.377318 | 5.4:-25889869 | None:intergenic |
| TGAATATAGGATGGAATTCC+CGG | 0.380777 | 5.4:+25890095 | MS.gene027504:CDS |
| TGGCGGTGGTGATTCTGGTT+TGG | 0.384909 | 5.4:+25886239 | MS.gene027504:CDS |
| GATATTTCTTTCGGTAAAAC+CGG | 0.385622 | 5.4:-25886069 | None:intergenic |
| TCCTATATTCACCAAGAATC+TGG | 0.388638 | 5.4:-25890083 | None:intergenic |
| TAGACCCAATCATCTTGTTC+TGG | 0.389062 | 5.4:-25889775 | None:intergenic |
| CCATTCCAGAACAAGATGAT+TGG | 0.391466 | 5.4:+25889770 | MS.gene027504:CDS |
| CGTGAATTCAGTTACTTGAA+TGG | 0.391949 | 5.4:-25889881 | None:intergenic |
| CTCTATTCTCGAACACTGCA+TGG | 0.395802 | 5.4:+25887531 | MS.gene027504:CDS |
| ACAGGCCATGATATTTCTTT+CGG | 0.397304 | 5.4:-25886078 | None:intergenic |
| AACACATCGTTTACTCTAAA+CGG | 0.397726 | 5.4:-25886045 | None:intergenic |
| AGTCTGCTTGAAGGATGAAA+TGG | 0.403621 | 5.4:+25887754 | MS.gene027504:CDS |
| GAGTATGCGCGGAGCATGTC+TGG | 0.410468 | 5.4:+25888103 | MS.gene027504:CDS |
| TTCTCATTGTTGCACCATCT+TGG | 0.420280 | 5.4:-25890042 | None:intergenic |
| GCCAGATTCTTGGTGAATAT+AGG | 0.422500 | 5.4:+25890082 | MS.gene027504:CDS |
| GTCGAAAATCCGCGGTAGAT+GGG | 0.427564 | 5.4:+25887676 | MS.gene027504:CDS |
| ATAATAATGGTTCTATTCAA+TGG | 0.427948 | 5.4:+25886163 | MS.gene027504:CDS |
| AGAGGATGAAAAGGAGACAT+TGG | 0.435033 | 5.4:-25885964 | None:intergenic |
| GAAGCGTTGAATAAGCGGTT+AGG | 0.435388 | 5.4:+25889000 | MS.gene027504:CDS |
| TCTCATGCCAGCAGGAATGC+TGG | 0.436934 | 5.4:+25887478 | MS.gene027504:CDS |
| ACACTTGAAAAGTGGGTAAC+TGG | 0.438027 | 5.4:+25887710 | MS.gene027504:CDS |
| ACCGCGAGAAGAGGATGAAA+AGG | 0.439887 | 5.4:-25885973 | None:intergenic |
| TGGGTAACTGGTGCATTTGC+TGG | 0.440657 | 5.4:+25887722 | MS.gene027504:CDS |
| TTCCCACGAATCAAGCTTCA+AGG | 0.441820 | 5.4:-25887320 | None:intergenic |
| GTGGGAAGAGCCTGCAGAGC+TGG | 0.443054 | 5.4:+25887336 | MS.gene027504:CDS |
| AGGACAGTGCTCATTCATAT+TGG | 0.449083 | 5.4:-25890142 | None:intergenic |
| CATTCAAGTAACTGAATTCA+CGG | 0.450345 | 5.4:+25889882 | MS.gene027504:CDS |
| CACATGTTTGCAGCATAAGC+TGG | 0.450698 | 5.4:-25888973 | None:intergenic |
| ACATCGCTGTTATCGAGTTT+CGG | 0.453232 | 5.4:+25886006 | MS.gene027504:CDS |
| TATTCTTTCAATGTATAAAG+AGG | 0.460691 | 5.4:+25889831 | MS.gene027504:CDS |
| TCCACCTCTTGATGCTCACT+TGG | 0.462178 | 5.4:+25888189 | MS.gene027504:CDS |
| ATTACATATTCCAGCTCTGC+AGG | 0.463727 | 5.4:-25887346 | None:intergenic |
| TCTGTCACTCCGTATAATAA+TGG | 0.464647 | 5.4:+25886150 | MS.gene027504:CDS |
| ATCATATTGTGATAACCATA+TGG | 0.464777 | 5.4:-25888130 | None:intergenic |
| CATTCCAGAACAAGATGATT+GGG | 0.468669 | 5.4:+25889771 | MS.gene027504:CDS |
| ATTTGTGGGTTGGTGAATCT+GGG | 0.472063 | 5.4:+25887780 | MS.gene027504:CDS |
| CTTTCAATGTATAAAGAGGC+TGG | 0.479262 | 5.4:+25889835 | MS.gene027504:CDS |
| CAACACCATACCGGATAACA+TGG | 0.481331 | 5.4:+25887269 | MS.gene027504:CDS |
| AGCATGTCTGGCAAGCCATA+TGG | 0.481486 | 5.4:+25888115 | MS.gene027504:CDS |
| TTCGTGATGCATACATGCTT+AGG | 0.484507 | 5.4:+25889992 | MS.gene027504:CDS |
| GGAACTCTAAATTGGAACTC+TGG | 0.485642 | 5.4:-25887556 | None:intergenic |
| ATTCAACTCCACTGCTGCAT+GGG | 0.486012 | 5.4:+25888081 | MS.gene027504:CDS |
| TCTGTGTTTCTCATGCCAGC+AGG | 0.491314 | 5.4:+25887470 | MS.gene027504:CDS |
| TCTATTCTCGAACACTGCAT+GGG | 0.492246 | 5.4:+25887532 | MS.gene027504:CDS |
| AGTAGTAGTCCCATGTTATC+CGG | 0.494320 | 5.4:-25887279 | None:intergenic |
| TGCTCATTCATATTGGCATA+AGG | 0.496178 | 5.4:-25890135 | None:intergenic |
| CTCATGCCAGCAGGAATGCT+GGG | 0.497653 | 5.4:+25887479 | MS.gene027504:CDS |
| TTGAGAAACGCATTCAGCCT+TGG | 0.503115 | 5.4:+25887603 | MS.gene027504:CDS |
| TCATACAGCAGTCTGCTTGA+AGG | 0.504325 | 5.4:+25887745 | MS.gene027504:CDS |
| TCACCAGAATGAACATCTGC+AGG | 0.505114 | 5.4:-25887641 | None:intergenic |
| AAGCGTTGAATAAGCGGTTA+GGG | 0.506168 | 5.4:+25889001 | MS.gene027504:CDS |
| CATGCAGTGTTCGAGAATAG+AGG | 0.507962 | 5.4:-25887530 | None:intergenic |
| TAGTCCCATGTTATCCGGTA+TGG | 0.508088 | 5.4:-25887274 | None:intergenic |
| GTCTGCTTGAAGGATGAAAT+GGG | 0.509012 | 5.4:+25887755 | MS.gene027504:CDS |
| ACTTGAATGGAGCTAGAAAT+GGG | 0.509499 | 5.4:-25889868 | None:intergenic |
| TCACCAAGAATCTGGCAGAA+TGG | 0.512065 | 5.4:-25890075 | None:intergenic |
| GGAACCAAAGTGTTATAGCC+CGG | 0.517137 | 5.4:-25890114 | None:intergenic |
| TGGTGCCGTTCTCTATCTCA+AGG | 0.519495 | 5.4:+25886263 | MS.gene027504:CDS |
| AGACAGGGGAAGCACACAGC+TGG | 0.519722 | 5.4:+25887221 | MS.gene027504:intron |
| ACGATCAAAACCGCGAGAAG+AGG | 0.520263 | 5.4:-25885982 | None:intergenic |
| TGGTAATTCCATGGCATGAA+TGG | 0.520928 | 5.4:+25887984 | MS.gene027504:CDS |
| TTGTACAGGTAAAGCAGCAT+GGG | 0.528303 | 5.4:+25887444 | MS.gene027504:intron |
| CCAATCATCTTGTTCTGGAA+TGG | 0.530482 | 5.4:-25889770 | None:intergenic |
| CGCATACTCCCATGCAGCAG+TGG | 0.532485 | 5.4:-25888089 | None:intergenic |
| AATTCAACTCCACTGCTGCA+TGG | 0.534586 | 5.4:+25888080 | MS.gene027504:CDS |
| ATTCCCGGGCTATAACACTT+TGG | 0.537660 | 5.4:+25890110 | MS.gene027504:CDS |
| GCCTATCGTAAGTTGGAGGA+AGG | 0.540693 | 5.4:-25890167 | None:intergenic |
| GGATGAAATGGGAAATTTGT+GGG | 0.541042 | 5.4:+25887766 | MS.gene027504:CDS |
| TACCTTGAAGCTTGATTCGT+GGG | 0.541678 | 5.4:+25887318 | MS.gene027504:CDS |
| AGTGTGCCCAGCATTCCTGC+TGG | 0.541881 | 5.4:-25887485 | None:intergenic |
| AAGCAATGCTATCTGTGGGT+TGG | 0.543286 | 5.4:-25888032 | None:intergenic |
| AAATAATTGTGGTAATTCCA+TGG | 0.547273 | 5.4:+25887975 | MS.gene027504:CDS |
| ATCTGGGCATGAGAATGAAA+AGG | 0.548561 | 5.4:+25887796 | MS.gene027504:CDS |
| ATACCTTGAAGCTTGATTCG+TGG | 0.551856 | 5.4:+25887317 | MS.gene027504:CDS |
| ATCAAACACGTCTACCAAGA+TGG | 0.552893 | 5.4:+25890028 | MS.gene027504:CDS |
| GAAATGGGAAATTTGTGGGT+TGG | 0.554717 | 5.4:+25887770 | MS.gene027504:CDS |
| AATGGTTCTATTCAATGGAA+AGG | 0.557896 | 5.4:+25886168 | MS.gene027504:CDS |
| TCGAAAATCCGCGGTAGATG+GGG | 0.560142 | 5.4:+25887677 | MS.gene027504:CDS |
| TGGGAAGCTGCTCTTAAAGA+TGG | 0.564571 | 5.4:+25888007 | MS.gene027504:CDS |
| GAGTTTACTCACCATGGTGG+CGG | 0.565715 | 5.4:+25886222 | MS.gene027504:CDS |
| GAACCAAAGTGTTATAGCCC+GGG | 0.566880 | 5.4:-25890113 | None:intergenic |
| TGTGAAGGCCTATCGTAAGT+TGG | 0.567007 | 5.4:-25890174 | None:intergenic |
| AAGTGAGCATCAAGAGGTGG+AGG | 0.573957 | 5.4:-25888187 | None:intergenic |
| GTGACAGATCCAACAAAAGA+AGG | 0.575948 | 5.4:-25886135 | None:intergenic |
| TTTACTCACCATGGTGGCGG+TGG | 0.576073 | 5.4:+25886225 | MS.gene027504:CDS |
| GCTTCCCACCATTCATGCCA+TGG | 0.578286 | 5.4:-25887992 | None:intergenic |
| CCCTTCCTCCAACTTACGAT+AGG | 0.583898 | 5.4:+25890166 | MS.gene027504:CDS |
| ATTGTACAGGTAAAGCAGCA+TGG | 0.586593 | 5.4:+25887443 | MS.gene027504:intron |
| AGCACACAGCTGGACCTGCA+TGG | 0.588519 | 5.4:+25887231 | MS.gene027504:CDS |
| TGAAACCTTGAGATAGAGAA+CGG | 0.589505 | 5.4:-25886268 | None:intergenic |
| CTGCTGCATGGGAGTATGCG+CGG | 0.591876 | 5.4:+25888092 | MS.gene027504:CDS |
| CAGAATCACCACCGCCACCA+TGG | 0.592744 | 5.4:-25886233 | None:intergenic |
| GATTCTTGGTGAATATAGGA+TGG | 0.595792 | 5.4:+25890086 | MS.gene027504:CDS |
| GCACGCAACTCTGGATGTAG+AGG | 0.595924 | 5.4:-25888055 | None:intergenic |
| TACTTGAGACTGAGAAGCGT+GGG | 0.595984 | 5.4:+25889725 | MS.gene027504:CDS |
| TAATTTCTGTCATGTCTATG+TGG | 0.596021 | 5.4:+25888938 | MS.gene027504:CDS |
| AGGATGAAATGGGAAATTTG+TGG | 0.602138 | 5.4:+25887765 | MS.gene027504:CDS |
| CTGTCATGTCTATGTGGACA+AGG | 0.604457 | 5.4:+25888944 | MS.gene027504:CDS |
| TCGTAAGTTGGAGGAAGGGA+AGG | 0.604565 | 5.4:-25890162 | None:intergenic |
| AGAGGAAGCAATGCTATCTG+TGG | 0.608658 | 5.4:-25888037 | None:intergenic |
| AGAGTTCCTAAAGAAACACA+TGG | 0.618940 | 5.4:+25887571 | MS.gene027504:CDS |
| TAATTCCATGGCATGAATGG+TGG | 0.622802 | 5.4:+25887987 | MS.gene027504:CDS |
| AAACTTGAGTTTACTCACCA+TGG | 0.626316 | 5.4:+25886216 | MS.gene027504:CDS |
| GAATATAGGATGGAATTCCC+GGG | 0.626423 | 5.4:+25890096 | MS.gene027504:CDS |
| GGTGGTGATTCTGGTTTGGG+TGG | 0.629701 | 5.4:+25886243 | MS.gene027504:CDS |
| GGAATGAAGCGTTGAATAAG+CGG | 0.630610 | 5.4:+25888995 | MS.gene027504:CDS |
| GGATCAATAGTTGCACGCCA+AGG | 0.634221 | 5.4:-25887620 | None:intergenic |
| GAAAACATACAGATCCATGC+AGG | 0.634933 | 5.4:-25887245 | None:intergenic |
| GATGATTGGGTCTACAGTGA+CGG | 0.635442 | 5.4:+25889784 | MS.gene027504:CDS |
| CGATCAACCTAACATTGTGA+AGG | 0.636736 | 5.4:-25890189 | None:intergenic |
| CCTATCGTAAGTTGGAGGAA+GGG | 0.638531 | 5.4:-25890166 | None:intergenic |
| ACCAAGTGAGCATCAAGAGG+TGG | 0.639800 | 5.4:-25888190 | None:intergenic |
| CAGCTTATGCTGCAAACATG+TGG | 0.640388 | 5.4:+25888974 | MS.gene027504:CDS |
| AAAATCCGCGGTAGATGGGG+AGG | 0.643180 | 5.4:+25887680 | MS.gene027504:CDS |
| AATTCCATGGCATGAATGGT+GGG | 0.644394 | 5.4:+25887988 | MS.gene027504:CDS |
| CTATTCTCGAACACTGCATG+GGG | 0.644624 | 5.4:+25887533 | MS.gene027504:CDS |
| GAAGGCCTATCGTAAGTTGG+AGG | 0.653840 | 5.4:-25890171 | None:intergenic |
| AATACCAAGTGAGCATCAAG+AGG | 0.657319 | 5.4:-25888193 | None:intergenic |
| CGGAAAGTCAACAACATGTG+TGG | 0.663104 | 5.4:+25889804 | MS.gene027504:CDS |
| CAAAACCTCCCCATCTACCG+CGG | 0.663802 | 5.4:-25887685 | None:intergenic |
| AACACCATACCGGATAACAT+GGG | 0.665103 | 5.4:+25887270 | MS.gene027504:CDS |
| CTACTTGAGACTGAGAAGCG+TGG | 0.666781 | 5.4:+25889724 | MS.gene027504:CDS |
| CTATGAAAATTATTCAACAC+AGG | 0.669825 | 5.4:-25886096 | None:intergenic |
| GCAGGGTGAAGAAATAATTG+TGG | 0.670393 | 5.4:+25887964 | MS.gene027504:intron |
| GAATAAGCGGTTAGGGACCG+AGG | 0.672405 | 5.4:+25889008 | MS.gene027504:CDS |
| TGTACAGGTAAAGCAGCATG+GGG | 0.684818 | 5.4:+25887445 | MS.gene027504:intron |
| GAGGAAGCAATGCTATCTGT+GGG | 0.686592 | 5.4:-25888036 | None:intergenic |
| TTGGCTGTGTCGAAAATCCG+CGG | 0.695554 | 5.4:+25887668 | MS.gene027504:CDS |
| GAGTTCCTAAAGAAACACAT+GGG | 0.697196 | 5.4:+25887572 | MS.gene027504:CDS |
| CTTGAGTTTACTCACCATGG+TGG | 0.712375 | 5.4:+25886219 | MS.gene027504:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATTTGTAATTTATCT+TGG | - | chr5.4:25889220-25889239 | None:intergenic | 10.0% |
| !!! | TCAATTTTGTTTTTAAAAAA+GGG | - | chr5.4:25886598-25886617 | None:intergenic | 10.0% |
| !! | AAATGATTATGATTAATCTT+AGG | - | chr5.4:25886907-25886926 | None:intergenic | 15.0% |
| !! | AAATTTACAAAATAAACTTG+TGG | - | chr5.4:25887159-25887178 | None:intergenic | 15.0% |
| !! | AATTATATTCAATTGGAATT+TGG | + | chr5.4:25886953-25886972 | MS.gene027504:intron | 15.0% |
| !! | ACATTAAACAAATTTATAGA+TGG | - | chr5.4:25889510-25889529 | None:intergenic | 15.0% |
| !! | ATCTGATAATTATATTCAAT+TGG | + | chr5.4:25886946-25886965 | MS.gene027504:intron | 15.0% |
| !! | TAAATTACAAATAAATTGAG+AGG | + | chr5.4:25889223-25889242 | MS.gene027504:intron | 15.0% |
| !!! | AATTATTTTCTATAATCTCA+TGG | + | chr5.4:25886291-25886310 | MS.gene027504:intron | 15.0% |
| !!! | CTCAATTTTGTTTTTAAAAA+AGG | - | chr5.4:25886599-25886618 | None:intergenic | 15.0% |
| !!! | TATGATTTTCTTTTAAAAGA+GGG | + | chr5.4:25888689-25888708 | MS.gene027504:intron | 15.0% |
| !!! | TTATGATTTTCTTTTAAAAG+AGG | + | chr5.4:25888688-25888707 | MS.gene027504:intron | 15.0% |
| !!! | TTTATATTACTCTCTTTTTT+TGG | - | chr5.4:25888265-25888284 | None:intergenic | 15.0% |
| !! | AAAAATAAATTCTACTTTGG+AGG | - | chr5.4:25886334-25886353 | None:intergenic | 20.0% |
| !! | AAAATAAATTCTACTTTGGA+GGG | - | chr5.4:25886333-25886352 | None:intergenic | 20.0% |
| !! | AAGAAATAGTTTAGTCTATT+TGG | + | chr5.4:25888418-25888437 | MS.gene027504:intron | 20.0% |
| !! | AGAAATAGTTTAGTCTATTT+GGG | + | chr5.4:25888419-25888438 | MS.gene027504:intron | 20.0% |
| !! | AGGAAAAATAAATTCTACTT+TGG | - | chr5.4:25886337-25886356 | None:intergenic | 20.0% |
| !! | ATGTAATGTACTAAGTATAA+AGG | + | chr5.4:25889382-25889401 | MS.gene027504:intron | 20.0% |
| !! | GAACATTTAGTAAAAGATAA+AGG | + | chr5.4:25889470-25889489 | MS.gene027504:intron | 20.0% |
| !! | GAGTAATATAAATATTGAAC+CGG | + | chr5.4:25888273-25888292 | MS.gene027504:intron | 20.0% |
| !! | TAGAATATATATTTAGCTGA+AGG | + | chr5.4:25888306-25888325 | MS.gene027504:intron | 20.0% |
| !! | TATTCTTTCAATGTATAAAG+AGG | + | chr5.4:25889831-25889850 | MS.gene027504:CDS | 20.0% |
| !! | TGAATAGAACCATTATTATA+CGG | - | chr5.4:25886162-25886181 | None:intergenic | 20.0% |
| !! | TGATGTAGCTATATTTAAAT+GGG | - | chr5.4:25886822-25886841 | None:intergenic | 20.0% |
| !! | TTACATTTAGTATGGAATTT+AGG | + | chr5.4:25889137-25889156 | MS.gene027504:intron | 20.0% |
| !!! | AATGATTCTAAAAAAGAATG+AGG | - | chr5.4:25888554-25888573 | None:intergenic | 20.0% |
| !!! | ACATTTTGAGAAAATCAAAT+AGG | - | chr5.4:25887876-25887895 | None:intergenic | 20.0% |
| !!! | AGTGATGATATCTTATTTAT+GGG | + | chr5.4:25886979-25886998 | MS.gene027504:intron | 20.0% |
| !!! | ATAATAATGGTTCTATTCAA+TGG | + | chr5.4:25886163-25886182 | MS.gene027504:CDS | 20.0% |
| !!! | ATGATTGTTTTACAATTAGT+GGG | + | chr5.4:25889657-25889676 | MS.gene027504:intron | 20.0% |
| !!! | TTTTACATTGCATGAAAAAT+TGG | + | chr5.4:25889286-25889305 | MS.gene027504:intron | 20.0% |
| ! | AAATAATTGTGGTAATTCCA+TGG | + | chr5.4:25887975-25887994 | MS.gene027504:CDS | 25.0% |
| ! | AACTAAATTCAGATAAACAG+AGG | - | chr5.4:25887056-25887075 | None:intergenic | 25.0% |
| ! | AATGAAAGAACCAAAAATCA+AGG | - | chr5.4:25889329-25889348 | None:intergenic | 25.0% |
| ! | AGAATGAAAAGGTAAAAATG+TGG | + | chr5.4:25887807-25887826 | MS.gene027504:intron | 25.0% |
| ! | AGCAATATCAATATATACCT+CGG | - | chr5.4:25889028-25889047 | None:intergenic | 25.0% |
| ! | AGTTATGTGATCATATATCA+TGG | - | chr5.4:25888524-25888543 | None:intergenic | 25.0% |
| ! | ATCATATTGTGATAACCATA+TGG | - | chr5.4:25888133-25888152 | None:intergenic | 25.0% |
| ! | CCACATGAAAGTAAAAAAAA+AGG | - | chr5.4:25889085-25889104 | None:intergenic | 25.0% |
| ! | CTATGAAAATTATTCAACAC+AGG | - | chr5.4:25886099-25886118 | None:intergenic | 25.0% |
| ! | GACATTAGTTACATTTAGTA+TGG | + | chr5.4:25889129-25889148 | MS.gene027504:intron | 25.0% |
| ! | GGTAAAAATGTGGAATATTA+TGG | + | chr5.4:25887817-25887836 | MS.gene027504:intron | 25.0% |
| ! | GTGATGTAGCTATATTTAAA+TGG | - | chr5.4:25886823-25886842 | None:intergenic | 25.0% |
| ! | TATATTCTACACAAAAATGC+CGG | - | chr5.4:25888295-25888314 | None:intergenic | 25.0% |
| ! | TATTTACTAATGGTGTGTTT+GGG | - | chr5.4:25888644-25888663 | None:intergenic | 25.0% |
| ! | TCCTTAATAAAGTAATACAG+CGG | - | chr5.4:25888332-25888351 | None:intergenic | 25.0% |
| ! | TTTAGATTGAAGTGTATGTT+TGG | - | chr5.4:25886536-25886555 | None:intergenic | 25.0% |
| !! | ACATTACATATTAGTCCTTT+TGG | - | chr5.4:25889371-25889390 | None:intergenic | 25.0% |
| !! | ACTCAATTAATTTTTCTTGC+TGG | + | chr5.4:25886506-25886525 | MS.gene027504:intron | 25.0% |
| !! | AGAATATCATTAGTCTATAC+AGG | + | chr5.4:25887914-25887933 | MS.gene027504:intron | 25.0% |
| !! | ATCACAATATGATTTTCAGT+TGG | + | chr5.4:25888140-25888159 | MS.gene027504:CDS | 25.0% |
| !! | CAGTGATGATATCTTATTTA+TGG | + | chr5.4:25886978-25886997 | MS.gene027504:intron | 25.0% |
| !! | GTGATGATATCTTATTTATG+GGG | + | chr5.4:25886980-25886999 | MS.gene027504:intron | 25.0% |
| !! | TCCTTCAAACAAAAGTATAA+AGG | + | chr5.4:25889407-25889426 | MS.gene027504:intron | 25.0% |
| !! | TCTGCTGAAAATATAGTTTT+TGG | + | chr5.4:25887190-25887209 | MS.gene027504:intron | 25.0% |
| !! | TTATAGATGGCTAAAGTTTT+TGG | - | chr5.4:25889497-25889516 | None:intergenic | 25.0% |
| !! | TTTCTTTAGGAACTCTAAAT+TGG | - | chr5.4:25887567-25887586 | None:intergenic | 25.0% |
| !! | TTTTACCGAAAGAAATATCA+TGG | + | chr5.4:25886073-25886092 | MS.gene027504:CDS | 25.0% |
| !! | TTTTATACTTTGCATCATTG+AGG | + | chr5.4:25889194-25889213 | MS.gene027504:intron | 25.0% |
| !! | TTTTCTATAATCTCATGGTT+TGG | + | chr5.4:25886296-25886315 | MS.gene027504:intron | 25.0% |
| !!! | ATGGCTTATTGTTTTATTTC+AGG | + | chr5.4:25889256-25889275 | MS.gene027504:intron | 25.0% |
| !!! | ATTTTCTTTTAAAAGAGGGA+AGG | + | chr5.4:25888693-25888712 | MS.gene027504:intron | 25.0% |
| !!! | CCTTTTTTTTTACTTTCATG+TGG | + | chr5.4:25889082-25889101 | MS.gene027504:intron | 25.0% |
| !!! | GATGATTGTTTTACAATTAG+TGG | + | chr5.4:25889656-25889675 | MS.gene027504:intron | 25.0% |
| !!! | TCCTTTATACTTTTGTTTGA+AGG | - | chr5.4:25889411-25889430 | None:intergenic | 25.0% |
| !!! | TTCTTTCATTACTGTTTTGA+TGG | + | chr5.4:25889339-25889358 | MS.gene027504:intron | 25.0% |
| !!! | TTTTGTCTGAAACTTTTTGT+TGG | + | chr5.4:25887388-25887407 | MS.gene027504:intron | 25.0% |
| AAATTCTCACTGTATTGTAC+AGG | + | chr5.4:25887430-25887449 | MS.gene027504:intron | 30.0% | |
| AACACATCGTTTACTCTAAA+CGG | - | chr5.4:25886048-25886067 | None:intergenic | 30.0% | |
| AATAGTTTAGTCTATTTGGG+AGG | + | chr5.4:25888422-25888441 | MS.gene027504:intron | 30.0% | |
| AGATAGTTCATCACTTCATT+GGG | + | chr5.4:25887018-25887037 | MS.gene027504:intron | 30.0% | |
| AGTTACTCTTACACAAACAA+TGG | - | chr5.4:25888227-25888246 | None:intergenic | 30.0% | |
| ATAGTTTAGTCTATTTGGGA+GGG | + | chr5.4:25888423-25888442 | MS.gene027504:intron | 30.0% | |
| ATGAAGTGATGAACTATCTA+AGG | - | chr5.4:25887017-25887036 | None:intergenic | 30.0% | |
| CAGAAACACATTGAGATTAT+AGG | - | chr5.4:25889168-25889187 | None:intergenic | 30.0% | |
| CATATTCAATACAACTTGTG+AGG | - | chr5.4:25889577-25889596 | None:intergenic | 30.0% | |
| CATTAGTAAATAGTGCATTC+AGG | + | chr5.4:25888652-25888671 | MS.gene027504:intron | 30.0% | |
| CATTCAAGTAACTGAATTCA+CGG | + | chr5.4:25889882-25889901 | MS.gene027504:CDS | 30.0% | |
| CTATAATCTCAATGTGTTTC+TGG | + | chr5.4:25889166-25889185 | MS.gene027504:intron | 30.0% | |
| CTATTTACTAATGGTGTGTT+TGG | - | chr5.4:25888645-25888664 | None:intergenic | 30.0% | |
| CTGAATGCACTATTTACTAA+TGG | - | chr5.4:25888654-25888673 | None:intergenic | 30.0% | |
| GAAACAATTTGAATCATGAC+TGG | + | chr5.4:25888381-25888400 | MS.gene027504:intron | 30.0% | |
| GATATTTCTTTCGGTAAAAC+CGG | - | chr5.4:25886072-25886091 | None:intergenic | 30.0% | |
| TAATTTCTGTCATGTCTATG+TGG | + | chr5.4:25888938-25888957 | MS.gene027504:CDS | 30.0% | |
| TACGATTACAGAAACTTAAG+TGG | + | chr5.4:25889611-25889630 | MS.gene027504:intron | 30.0% | |
| TAGATAGTTCATCACTTCAT+TGG | + | chr5.4:25887017-25887036 | MS.gene027504:intron | 30.0% | |
| TCAGGTAGAATAAATTATGG+AGG | - | chr5.4:25886357-25886376 | None:intergenic | 30.0% | |
| TCCATAATTTATTCTACCTG+AGG | + | chr5.4:25886356-25886375 | MS.gene027504:intron | 30.0% | |
| TCTAACAAATAGCAATCAGT+TGG | - | chr5.4:25888363-25888382 | None:intergenic | 30.0% | |
| ! | AATGGTTCTATTCAATGGAA+AGG | + | chr5.4:25886168-25886187 | MS.gene027504:CDS | 30.0% |
| ! | AGACTAATGATATTCTGAGA+CGG | - | chr5.4:25887910-25887929 | None:intergenic | 30.0% |
| ! | TATAAAGAGGCTGGAATTTT+CGG | + | chr5.4:25889844-25889863 | MS.gene027504:CDS | 30.0% |
| !! | TTTCGCAAAATTTGAGTTGA+AGG | - | chr5.4:25886478-25886497 | None:intergenic | 30.0% |
| !!! | TGTTCATTCTGGTGATTTTT+TGG | + | chr5.4:25887649-25887668 | MS.gene027504:CDS | 30.0% |
| !!! | TTTTGAGACACTTGAAAAGT+GGG | + | chr5.4:25887703-25887722 | MS.gene027504:CDS | 30.0% |
| AAACTTGAGTTTACTCACCA+TGG | + | chr5.4:25886216-25886235 | MS.gene027504:CDS | 35.0% | |
| ACAGATCAAACGTTGCAAAA+AGG | - | chr5.4:25886851-25886870 | None:intergenic | 35.0% | |
| ACAGGCCATGATATTTCTTT+CGG | - | chr5.4:25886081-25886100 | None:intergenic | 35.0% | |
| ACTTGAATGGAGCTAGAAAT+GGG | - | chr5.4:25889871-25889890 | None:intergenic | 35.0% | |
| AGAGTTCCTAAAGAAACACA+TGG | + | chr5.4:25887571-25887590 | MS.gene027504:CDS | 35.0% | |
| AGATCAAACGTTGCAAAAAG+GGG | - | chr5.4:25886849-25886868 | None:intergenic | 35.0% | |
| AGGATGAAATGGGAAATTTG+TGG | + | chr5.4:25887765-25887784 | MS.gene027504:CDS | 35.0% | |
| ATAGTTCATCACTTCATTGG+GGG | + | chr5.4:25887020-25887039 | MS.gene027504:intron | 35.0% | |
| ATTGAGAGGACATATCTACA+TGG | + | chr5.4:25889237-25889256 | MS.gene027504:intron | 35.0% | |
| CAGATCAAACGTTGCAAAAA+GGG | - | chr5.4:25886850-25886869 | None:intergenic | 35.0% | |
| CATTCCAGAACAAGATGATT+GGG | + | chr5.4:25889771-25889790 | MS.gene027504:CDS | 35.0% | |
| CGTGAATTCAGTTACTTGAA+TGG | - | chr5.4:25889884-25889903 | None:intergenic | 35.0% | |
| CTTTCAATGTATAAAGAGGC+TGG | + | chr5.4:25889835-25889854 | MS.gene027504:CDS | 35.0% | |
| GAGTTCCTAAAGAAACACAT+GGG | + | chr5.4:25887572-25887591 | MS.gene027504:CDS | 35.0% | |
| GATAGTTCATCACTTCATTG+GGG | + | chr5.4:25887019-25887038 | MS.gene027504:intron | 35.0% | |
| GATTCTTGGTGAATATAGGA+TGG | + | chr5.4:25890086-25890105 | MS.gene027504:CDS | 35.0% | |
| GCCGCTGTATTACTTTATTA+AGG | + | chr5.4:25888328-25888347 | MS.gene027504:intron | 35.0% | |
| GCCTCAGGTAGAATAAATTA+TGG | - | chr5.4:25886360-25886379 | None:intergenic | 35.0% | |
| GGATGAAATGGGAAATTTGT+GGG | + | chr5.4:25887766-25887785 | MS.gene027504:CDS | 35.0% | |
| GTATTGTATTTGAGAACCAC+AGG | - | chr5.4:25888801-25888820 | None:intergenic | 35.0% | |
| TACTTGAATGGAGCTAGAAA+TGG | - | chr5.4:25889872-25889891 | None:intergenic | 35.0% | |
| TAGAGTAAACGATGTGTTAC+CGG | + | chr5.4:25886050-25886069 | MS.gene027504:CDS | 35.0% | |
| TAGTTTAGTCTATTTGGGAG+GGG | + | chr5.4:25888424-25888443 | MS.gene027504:intron | 35.0% | |
| TCCTATATTCACCAAGAATC+TGG | - | chr5.4:25890086-25890105 | None:intergenic | 35.0% | |
| TCTCAAAGATTGAATCTGAG+TGG | + | chr5.4:25886795-25886814 | MS.gene027504:intron | 35.0% | |
| TCTCTATTCTTCATTTCCTG+TGG | + | chr5.4:25888782-25888801 | MS.gene027504:intron | 35.0% | |
| TCTGTCACTCCGTATAATAA+TGG | + | chr5.4:25886150-25886169 | MS.gene027504:CDS | 35.0% | |
| TGAAACCTTGAGATAGAGAA+CGG | - | chr5.4:25886271-25886290 | None:intergenic | 35.0% | |
| TGAATATAGGATGGAATTCC+CGG | + | chr5.4:25890095-25890114 | MS.gene027504:CDS | 35.0% | |
| TGATGCTACTATGATCACTT+GGG | + | chr5.4:25886663-25886682 | MS.gene027504:intron | 35.0% | |
| TGCTCATTCATATTGGCATA+AGG | - | chr5.4:25890138-25890157 | None:intergenic | 35.0% | |
| TTAATCAATCCAACGAACAG+CGG | - | chr5.4:25887108-25887127 | None:intergenic | 35.0% | |
| TTCAGCATTGCAGAAATACA+GGG | - | chr5.4:25888732-25888751 | None:intergenic | 35.0% | |
| ! | AGTCTTCATGCCTTGATTTT+TGG | + | chr5.4:25889316-25889335 | MS.gene027504:intron | 35.0% |
| ! | GATATCTTATTTATGGGGAC+TGG | + | chr5.4:25886985-25887004 | MS.gene027504:intron | 35.0% |
| !! | CTTGTAGGTTCTAGTTCTTT+GGG | + | chr5.4:25888853-25888872 | MS.gene027504:intron | 35.0% |
| !! | GATTTGCTTCCTTCTTTTGT+TGG | + | chr5.4:25886126-25886145 | MS.gene027504:CDS | 35.0% |
| !! | TGTCTGAAACTTTTTGTTGG+TGG | + | chr5.4:25887391-25887410 | MS.gene027504:intron | 35.0% |
| !! | TTTTTGGTCGTTTACAGACA+GGG | + | chr5.4:25887206-25887225 | MS.gene027504:intron | 35.0% |
| !!! | GTTTTGAGACACTTGAAAAG+TGG | + | chr5.4:25887702-25887721 | MS.gene027504:CDS | 35.0% |
| AACACCATACCGGATAACAT+GGG | + | chr5.4:25887270-25887289 | MS.gene027504:CDS | 40.0% | |
| AACCTACAAGGCTACAACAT+TGG | - | chr5.4:25888843-25888862 | None:intergenic | 40.0% | |
| AATACCAAGTGAGCATCAAG+AGG | - | chr5.4:25888196-25888215 | None:intergenic | 40.0% | |
| AATTCCATGGCATGAATGGT+GGG | + | chr5.4:25887988-25888007 | MS.gene027504:CDS | 40.0% | |
| ACACTTGAAAAGTGGGTAAC+TGG | + | chr5.4:25887710-25887729 | MS.gene027504:CDS | 40.0% | |
| ACATCGCTGTTATCGAGTTT+CGG | + | chr5.4:25886006-25886025 | MS.gene027504:CDS | 40.0% | |
| AGGACAGTGCTCATTCATAT+TGG | - | chr5.4:25890145-25890164 | None:intergenic | 40.0% | |
| AGTAGTAGTCCCATGTTATC+CGG | - | chr5.4:25887282-25887301 | None:intergenic | 40.0% | |
| AGTCTGCTTGAAGGATGAAA+TGG | + | chr5.4:25887754-25887773 | MS.gene027504:CDS | 40.0% | |
| AGTTTAGTCTATTTGGGAGG+GGG | + | chr5.4:25888425-25888444 | MS.gene027504:intron | 40.0% | |
| ATCAAACACGTCTACCAAGA+TGG | + | chr5.4:25890028-25890047 | MS.gene027504:CDS | 40.0% | |
| ATCTGGGCATGAGAATGAAA+AGG | + | chr5.4:25887796-25887815 | MS.gene027504:CDS | 40.0% | |
| ATTACATATTCCAGCTCTGC+AGG | - | chr5.4:25887349-25887368 | None:intergenic | 40.0% | |
| ATTGTACAGGTAAAGCAGCA+TGG | + | chr5.4:25887443-25887462 | MS.gene027504:intron | 40.0% | |
| CCAAAGAACTAGAACCTACA+AGG | - | chr5.4:25888855-25888874 | None:intergenic | 40.0% | |
| CCATTCCAGAACAAGATGAT+TGG | + | chr5.4:25889770-25889789 | MS.gene027504:CDS | 40.0% | |
| CTGATGCTACTATGATCACT+TGG | + | chr5.4:25886662-25886681 | MS.gene027504:intron | 40.0% | |
| CTTTATCATCAGTCAAGTGC+TGG | + | chr5.4:25886743-25886762 | MS.gene027504:intron | 40.0% | |
| GAAAACATACAGATCCATGC+AGG | - | chr5.4:25887248-25887267 | None:intergenic | 40.0% | |
| GAAATGGGAAATTTGTGGGT+TGG | + | chr5.4:25887770-25887789 | MS.gene027504:CDS | 40.0% | |
| GAATATAGGATGGAATTCCC+GGG | + | chr5.4:25890096-25890115 | MS.gene027504:CDS | 40.0% | |
| GCAGGGTGAAGAAATAATTG+TGG | + | chr5.4:25887964-25887983 | MS.gene027504:intron | 40.0% | |
| GCCAGATTCTTGGTGAATAT+AGG | + | chr5.4:25890082-25890101 | MS.gene027504:CDS | 40.0% | |
| GGAACTCTAAATTGGAACTC+TGG | - | chr5.4:25887559-25887578 | None:intergenic | 40.0% | |
| GTCTGCTTGAAGGATGAAAT+GGG | + | chr5.4:25887755-25887774 | MS.gene027504:CDS | 40.0% | |
| GTGACAGATCCAACAAAAGA+AGG | - | chr5.4:25886138-25886157 | None:intergenic | 40.0% | |
| GTTCAGCATTGCAGAAATAC+AGG | - | chr5.4:25888733-25888752 | None:intergenic | 40.0% | |
| TAATTCCATGGCATGAATGG+TGG | + | chr5.4:25887987-25888006 | MS.gene027504:CDS | 40.0% | |
| TAGACCCAATCATCTTGTTC+TGG | - | chr5.4:25889778-25889797 | None:intergenic | 40.0% | |
| TCTATTCTCGAACACTGCAT+GGG | + | chr5.4:25887532-25887551 | MS.gene027504:CDS | 40.0% | |
| TCTCGTTTGTTTGTGCTTTC+AGG | + | chr5.4:25889681-25889700 | MS.gene027504:intron | 40.0% | |
| TGGTAATTCCATGGCATGAA+TGG | + | chr5.4:25887984-25888003 | MS.gene027504:CDS | 40.0% | |
| TTCGTGATGCATACATGCTT+AGG | + | chr5.4:25889992-25890011 | MS.gene027504:CDS | 40.0% | |
| TTCTCATTGTTGCACCATCT+TGG | - | chr5.4:25890045-25890064 | None:intergenic | 40.0% | |
| TTGCTCCCATGTGTTTCTTT+AGG | - | chr5.4:25887580-25887599 | None:intergenic | 40.0% | |
| TTGTACAGGTAAAGCAGCAT+GGG | + | chr5.4:25887444-25887463 | MS.gene027504:intron | 40.0% | |
| TTTCATGTGGAACAATCCTC+TGG | + | chr5.4:25889095-25889114 | MS.gene027504:intron | 40.0% | |
| ! | ATACCTTGAAGCTTGATTCG+TGG | + | chr5.4:25887317-25887336 | MS.gene027504:CDS | 40.0% |
| ! | ATCTCATGGTTTGGCATGTT+TGG | + | chr5.4:25886305-25886324 | MS.gene027504:intron | 40.0% |
| ! | ATGTTTTCGCAACACCATAC+CGG | + | chr5.4:25887260-25887279 | MS.gene027504:CDS | 40.0% |
| ! | TACCTTGAAGCTTGATTCGT+GGG | + | chr5.4:25887318-25887337 | MS.gene027504:CDS | 40.0% |
| ! | TTGAATTTTGCACGCAACTC+TGG | - | chr5.4:25888067-25888086 | None:intergenic | 40.0% |
| ! | TTTTGGTCGTTTACAGACAG+GGG | + | chr5.4:25887207-25887226 | MS.gene027504:intron | 40.0% |
| !! | AAGCGTTGAATAAGCGGTTA+GGG | + | chr5.4:25889001-25889020 | MS.gene027504:CDS | 40.0% |
| !! | AAGCTACAATTTCTAGCCTC+AGG | - | chr5.4:25886375-25886394 | None:intergenic | 40.0% |
| !! | AATTTGTGGGTTGGTGAATC+TGG | + | chr5.4:25887779-25887798 | MS.gene027504:CDS | 40.0% |
| !! | ATTTGTGGGTTGGTGAATCT+GGG | + | chr5.4:25887780-25887799 | MS.gene027504:CDS | 40.0% |
| !! | CATGACTGGTTTAGAGTCTT+GGG | + | chr5.4:25888395-25888414 | MS.gene027504:intron | 40.0% |
| !! | CCAATCATCTTGTTCTGGAA+TGG | - | chr5.4:25889773-25889792 | None:intergenic | 40.0% |
| !! | CCTTGTAGGTTCTAGTTCTT+TGG | + | chr5.4:25888852-25888871 | MS.gene027504:intron | 40.0% |
| !! | GGAATGAAGCGTTGAATAAG+CGG | + | chr5.4:25888995-25889014 | MS.gene027504:CDS | 40.0% |
| !! | TACCAATGTTGTAGCCTTGT+AGG | + | chr5.4:25888838-25888857 | MS.gene027504:intron | 40.0% |
| !! | TCATGACTGGTTTAGAGTCT+TGG | + | chr5.4:25888394-25888413 | MS.gene027504:intron | 40.0% |
| !!! | CATTACTGTTTTGATGGCGA+TGG | + | chr5.4:25889345-25889364 | MS.gene027504:intron | 40.0% |
| !!! | GGATTTTGGATGGTTTTGGA+GGG | + | chr5.4:25888446-25888465 | MS.gene027504:intron | 40.0% |
| !!! | GTTTTTGGTCGTTTACAGAC+AGG | + | chr5.4:25887205-25887224 | MS.gene027504:intron | 40.0% |
| AAGCAATGCTATCTGTGGGT+TGG | - | chr5.4:25888035-25888054 | None:intergenic | 45.0% | |
| AATTAGATGCCGCTGTTCGT+TGG | + | chr5.4:25887096-25887115 | MS.gene027504:intron | 45.0% | |
| AATTCAACTCCACTGCTGCA+TGG | + | chr5.4:25888080-25888099 | MS.gene027504:CDS | 45.0% | |
| ACTAATGGTGTGTTTGGGAG+AGG | - | chr5.4:25888639-25888658 | None:intergenic | 45.0% | |
| AGAGGAAGCAATGCTATCTG+TGG | - | chr5.4:25888040-25888059 | None:intergenic | 45.0% | |
| ATTCAACTCCACTGCTGCAT+GGG | + | chr5.4:25888081-25888100 | MS.gene027504:CDS | 45.0% | |
| ATTCCCGGGCTATAACACTT+TGG | + | chr5.4:25890110-25890129 | MS.gene027504:CDS | 45.0% | |
| CAACACCATACCGGATAACA+TGG | + | chr5.4:25887269-25887288 | MS.gene027504:CDS | 45.0% | |
| CAATCCTCTGGCAAAACAAG+TGG | + | chr5.4:25889107-25889126 | MS.gene027504:intron | 45.0% | |
| CACATGTTTGCAGCATAAGC+TGG | - | chr5.4:25888976-25888995 | None:intergenic | 45.0% | |
| CAGCTTATGCTGCAAACATG+TGG | + | chr5.4:25888974-25888993 | MS.gene027504:CDS | 45.0% | |
| CATGCAGTGTTCGAGAATAG+AGG | - | chr5.4:25887533-25887552 | None:intergenic | 45.0% | |
| CGGAAAGTCAACAACATGTG+TGG | + | chr5.4:25889804-25889823 | MS.gene027504:CDS | 45.0% | |
| CTAATGGTGTGTTTGGGAGA+GGG | - | chr5.4:25888638-25888657 | None:intergenic | 45.0% | |
| CTATTCTCGAACACTGCATG+GGG | + | chr5.4:25887533-25887552 | MS.gene027504:CDS | 45.0% | |
| CTCTATTCTCGAACACTGCA+TGG | + | chr5.4:25887531-25887550 | MS.gene027504:CDS | 45.0% | |
| CTGTCATGTCTATGTGGACA+AGG | + | chr5.4:25888944-25888963 | MS.gene027504:CDS | 45.0% | |
| CTTCCATTCTGCCAGATTCT+TGG | + | chr5.4:25890072-25890091 | MS.gene027504:CDS | 45.0% | |
| CTTGAGTTTACTCACCATGG+TGG | + | chr5.4:25886219-25886238 | MS.gene027504:CDS | 45.0% | |
| GAACAGCGGCATCTAATTTC+TGG | - | chr5.4:25887094-25887113 | None:intergenic | 45.0% | |
| GAGGAAGCAATGCTATCTGT+GGG | - | chr5.4:25888039-25888058 | None:intergenic | 45.0% | |
| GATCCTGCAGATGTTCATTC+TGG | + | chr5.4:25887638-25887657 | MS.gene027504:CDS | 45.0% | |
| GATGATTGGGTCTACAGTGA+CGG | + | chr5.4:25889784-25889803 | MS.gene027504:CDS | 45.0% | |
| GTGATGTACGTGTTATGTGC+AGG | + | chr5.4:25888915-25888934 | MS.gene027504:intron | 45.0% | |
| TAGTCCCATGTTATCCGGTA+TGG | - | chr5.4:25887277-25887296 | None:intergenic | 45.0% | |
| TCACCAAGAATCTGGCAGAA+TGG | - | chr5.4:25890078-25890097 | None:intergenic | 45.0% | |
| TCACCAGAATGAACATCTGC+AGG | - | chr5.4:25887644-25887663 | None:intergenic | 45.0% | |
| TCATACAGCAGTCTGCTTGA+AGG | + | chr5.4:25887745-25887764 | MS.gene027504:CDS | 45.0% | |
| TGGGAAGCTGCTCTTAAAGA+TGG | + | chr5.4:25888007-25888026 | MS.gene027504:CDS | 45.0% | |
| TGTACAGGTAAAGCAGCATG+GGG | + | chr5.4:25887445-25887464 | MS.gene027504:intron | 45.0% | |
| TGTGAAGGCCTATCGTAAGT+TGG | - | chr5.4:25890177-25890196 | None:intergenic | 45.0% | |
| TTCCCACGAATCAAGCTTCA+AGG | - | chr5.4:25887323-25887342 | None:intergenic | 45.0% | |
| TTGAGAAACGCATTCAGCCT+TGG | + | chr5.4:25887603-25887622 | MS.gene027504:CDS | 45.0% | |
| ! | AGGGGGATTTTGGATGGTTT+TGG | + | chr5.4:25888442-25888461 | MS.gene027504:intron | 45.0% |
| ! | CCTATCGTAAGTTGGAGGAA+GGG | - | chr5.4:25890169-25890188 | None:intergenic | 45.0% |
| ! | GAACCAAAGTGTTATAGCCC+GGG | - | chr5.4:25890116-25890135 | None:intergenic | 45.0% |
| ! | GGAACCAAAGTGTTATAGCC+CGG | - | chr5.4:25890117-25890136 | None:intergenic | 45.0% |
| ! | TACTTGAGACTGAGAAGCGT+GGG | + | chr5.4:25889725-25889744 | MS.gene027504:CDS | 45.0% |
| ! | TCCTTTTCATCCTCTTCTCG+CGG | + | chr5.4:25885972-25885991 | MS.gene027504:CDS | 45.0% |
| ! | TCTATTTGGGAGGGGGATTT+TGG | + | chr5.4:25888432-25888451 | MS.gene027504:intron | 45.0% |
| !! | GAAGCGTTGAATAAGCGGTT+AGG | + | chr5.4:25889000-25889019 | MS.gene027504:CDS | 45.0% |
| !! | TTACCCCTCTTCTAGTTCCA+CGG | + | chr5.4:25886630-25886649 | MS.gene027504:intron | 45.0% |
| !!! | ATGTCCACTTGTTTTGCCAG+AGG | - | chr5.4:25889114-25889133 | None:intergenic | 45.0% |
| !!! | GGGATTTTGGATGGTTTTGG+AGG | + | chr5.4:25888445-25888464 | MS.gene027504:intron | 45.0% |
| !!! | TTTTGATGGCGATGGCCAAA+AGG | + | chr5.4:25889353-25889372 | MS.gene027504:intron | 45.0% |
| AAGTGAGCATCAAGAGGTGG+AGG | - | chr5.4:25888190-25888209 | None:intergenic | 50.0% | |
| ACCAAGTGAGCATCAAGAGG+TGG | - | chr5.4:25888193-25888212 | None:intergenic | 50.0% | |
| ACCGCGAGAAGAGGATGAAA+AGG | - | chr5.4:25885976-25885995 | None:intergenic | 50.0% | |
| ACGATCAAAACCGCGAGAAG+AGG | - | chr5.4:25885985-25886004 | None:intergenic | 50.0% | |
| AGAGATTCATGCCATCGCCA+AGG | - | chr5.4:25889920-25889939 | None:intergenic | 50.0% | |
| AGCATCAGTGATATCGACCG+TGG | - | chr5.4:25886650-25886669 | None:intergenic | 50.0% | |
| AGCATGTCTGGCAAGCCATA+TGG | + | chr5.4:25888115-25888134 | MS.gene027504:CDS | 50.0% | |
| ATCGACCGTGGAACTAGAAG+AGG | - | chr5.4:25886638-25886657 | None:intergenic | 50.0% | |
| CCCTTCCTCCAACTTACGAT+AGG | + | chr5.4:25890166-25890185 | MS.gene027504:CDS | 50.0% | |
| CGATCGTCTGTCATTGTGCA+GGG | + | chr5.4:25887947-25887966 | MS.gene027504:intron | 50.0% | |
| CTACTTGAGACTGAGAAGCG+TGG | + | chr5.4:25889724-25889743 | MS.gene027504:CDS | 50.0% | |
| GAGTTTACTCACCATGGTGG+CGG | + | chr5.4:25886222-25886241 | MS.gene027504:CDS | 50.0% | |
| GGATCAATAGTTGCACGCCA+AGG | - | chr5.4:25887623-25887642 | None:intergenic | 50.0% | |
| GTCGAAAATCCGCGGTAGAT+GGG | + | chr5.4:25887676-25887695 | MS.gene027504:CDS | 50.0% | |
| TCCACCTCTTGATGCTCACT+TGG | + | chr5.4:25888189-25888208 | MS.gene027504:CDS | 50.0% | |
| TCGAAAATCCGCGGTAGATG+GGG | + | chr5.4:25887677-25887696 | MS.gene027504:CDS | 50.0% | |
| TCGACCGTGGAACTAGAAGA+GGG | - | chr5.4:25886637-25886656 | None:intergenic | 50.0% | |
| TCGATCGTCTGTCATTGTGC+AGG | + | chr5.4:25887946-25887965 | MS.gene027504:intron | 50.0% | |
| TCTGTGTTTCTCATGCCAGC+AGG | + | chr5.4:25887470-25887489 | MS.gene027504:CDS | 50.0% | |
| TGGGTAACTGGTGCATTTGC+TGG | + | chr5.4:25887722-25887741 | MS.gene027504:CDS | 50.0% | |
| TGTCGAAAATCCGCGGTAGA+TGG | + | chr5.4:25887675-25887694 | MS.gene027504:CDS | 50.0% | |
| TGTGTTTGGGAGAGGGATGT+TGG | - | chr5.4:25888631-25888650 | None:intergenic | 50.0% | |
| TTGGCTGTGTCGAAAATCCG+CGG | + | chr5.4:25887668-25887687 | MS.gene027504:CDS | 50.0% | |
| TTTGGGAGAGGGATGTTGGA+GGG | - | chr5.4:25888627-25888646 | None:intergenic | 50.0% | |
| ! | GAAGGCCTATCGTAAGTTGG+AGG | - | chr5.4:25890174-25890193 | None:intergenic | 50.0% |
| ! | GCCTATCGTAAGTTGGAGGA+AGG | - | chr5.4:25890170-25890189 | None:intergenic | 50.0% |
| ! | TCGTAAGTTGGAGGAAGGGA+AGG | - | chr5.4:25890165-25890184 | None:intergenic | 50.0% |
| ! | TTTGGGAGGGGGATTTTGGA+TGG | + | chr5.4:25888436-25888455 | MS.gene027504:intron | 50.0% |
| !! | TGGTGCCGTTCTCTATCTCA+AGG | + | chr5.4:25886263-25886282 | MS.gene027504:CDS | 50.0% |
| AAAATCCGCGGTAGATGGGG+AGG | + | chr5.4:25887680-25887699 | MS.gene027504:CDS | 55.0% | |
| AAGTCCTGTTGCCTTGGCGA+TGG | + | chr5.4:25889906-25889925 | MS.gene027504:intron | 55.0% | |
| CAAAACCTCCCCATCTACCG+CGG | - | chr5.4:25887688-25887707 | None:intergenic | 55.0% | |
| CACGGTAAGTCCTGTTGCCT+TGG | + | chr5.4:25889900-25889919 | MS.gene027504:intron | 55.0% | |
| CGACCGTGGAACTAGAAGAG+GGG | - | chr5.4:25886636-25886655 | None:intergenic | 55.0% | |
| CTCATGCCAGCAGGAATGCT+GGG | + | chr5.4:25887479-25887498 | MS.gene027504:CDS | 55.0% | |
| GAATAAGCGGTTAGGGACCG+AGG | + | chr5.4:25889008-25889027 | MS.gene027504:CDS | 55.0% | |
| GCACGCAACTCTGGATGTAG+AGG | - | chr5.4:25888058-25888077 | None:intergenic | 55.0% | |
| GCTTCCCACCATTCATGCCA+TGG | - | chr5.4:25887995-25888014 | None:intergenic | 55.0% | |
| GTTTGGGAGAGGGATGTTGG+AGG | - | chr5.4:25888628-25888647 | None:intergenic | 55.0% | |
| TCTCATGCCAGCAGGAATGC+TGG | + | chr5.4:25887478-25887497 | MS.gene027504:CDS | 55.0% | |
| TTGGGAGAGGGATGTTGGAG+GGG | - | chr5.4:25888626-25888645 | None:intergenic | 55.0% | |
| ! | TGGCGGTGGTGATTCTGGTT+TGG | + | chr5.4:25886239-25886258 | MS.gene027504:CDS | 55.0% |
| !! | GGCGGTGGTGATTCTGGTTT+GGG | + | chr5.4:25886240-25886259 | MS.gene027504:CDS | 55.0% |
| !! | GGTGGTGATTCTGGTTTGGG+TGG | + | chr5.4:25886243-25886262 | MS.gene027504:CDS | 55.0% |
| !! | TTTACTCACCATGGTGGCGG+TGG | + | chr5.4:25886225-25886244 | MS.gene027504:CDS | 55.0% |
| AGAGGGATGTTGGAGGGGAG+GGG | - | chr5.4:25888621-25888640 | None:intergenic | 60.0% | |
| AGCACACAGCTGGACCTGCA+TGG | + | chr5.4:25887231-25887250 | MS.gene027504:CDS | 60.0% | |
| AGTGTGCCCAGCATTCCTGC+TGG | - | chr5.4:25887488-25887507 | None:intergenic | 60.0% | |
| CAGAATCACCACCGCCACCA+TGG | - | chr5.4:25886236-25886255 | None:intergenic | 60.0% | |
| CATGCCATCGCCAAGGCAAC+AGG | - | chr5.4:25889913-25889932 | None:intergenic | 60.0% | |
| CGCATACTCCCATGCAGCAG+TGG | - | chr5.4:25888092-25888111 | None:intergenic | 60.0% | |
| GAGAGGGATGTTGGAGGGGA+GGG | - | chr5.4:25888622-25888641 | None:intergenic | 60.0% | |
| GAGTATGCGCGGAGCATGTC+TGG | + | chr5.4:25888103-25888122 | MS.gene027504:CDS | 60.0% | |
| ! | AGACAGGGGAAGCACACAGC+TGG | + | chr5.4:25887221-25887240 | MS.gene027504:intron | 60.0% |
| ! | CTGCTGCATGGGAGTATGCG+CGG | + | chr5.4:25888092-25888111 | MS.gene027504:CDS | 60.0% |
| !! | CATGGTGGCGGTGGTGATTC+TGG | + | chr5.4:25886234-25886253 | MS.gene027504:CDS | 60.0% |
| GATGTTGGAGGGGAGGGGAG+GGG | - | chr5.4:25888616-25888635 | None:intergenic | 65.0% | |
| GGAGAGGGATGTTGGAGGGG+AGG | - | chr5.4:25888623-25888642 | None:intergenic | 65.0% | |
| GGATGTTGGAGGGGAGGGGA+GGG | - | chr5.4:25888617-25888636 | None:intergenic | 65.0% | |
| GTGGGAAGAGCCTGCAGAGC+TGG | + | chr5.4:25887336-25887355 | MS.gene027504:CDS | 65.0% | |
| GGGATGTTGGAGGGGAGGGG+AGG | - | chr5.4:25888618-25888637 | None:intergenic | 70.0% | |
| TTGGAGGGGAGGGGAGGGGA+GGG | - | chr5.4:25888612-25888631 | None:intergenic | 70.0% | |
| GTTGGAGGGGAGGGGAGGGG+AGG | - | chr5.4:25888613-25888632 | None:intergenic | 75.0% | |
| TGGAGGGGAGGGGAGGGGAG+GGG | - | chr5.4:25888611-25888630 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 25885967 | 25890203 | 25885967 | ID=MS.gene027504 |
| chr5.4 | mRNA | 25885967 | 25890203 | 25885967 | ID=MS.gene027504.t1;Parent=MS.gene027504 |
| chr5.4 | exon | 25885967 | 25886284 | 25885967 | ID=MS.gene027504.t1.exon1;Parent=MS.gene027504.t1 |
| chr5.4 | CDS | 25885967 | 25886284 | 25885967 | ID=cds.MS.gene027504.t1;Parent=MS.gene027504.t1 |
| chr5.4 | exon | 25887223 | 25887363 | 25887223 | ID=MS.gene027504.t1.exon2;Parent=MS.gene027504.t1 |
| chr5.4 | CDS | 25887223 | 25887363 | 25887223 | ID=cds.MS.gene027504.t1;Parent=MS.gene027504.t1 |
| chr5.4 | exon | 25887452 | 25887817 | 25887452 | ID=MS.gene027504.t1.exon3;Parent=MS.gene027504.t1 |
| chr5.4 | CDS | 25887452 | 25887817 | 25887452 | ID=cds.MS.gene027504.t1;Parent=MS.gene027504.t1 |
| chr5.4 | exon | 25887968 | 25888210 | 25887968 | ID=MS.gene027504.t1.exon4;Parent=MS.gene027504.t1 |
| chr5.4 | CDS | 25887968 | 25888210 | 25887968 | ID=cds.MS.gene027504.t1;Parent=MS.gene027504.t1 |
| chr5.4 | exon | 25888937 | 25889029 | 25888937 | ID=MS.gene027504.t1.exon5;Parent=MS.gene027504.t1 |
| chr5.4 | CDS | 25888937 | 25889029 | 25888937 | ID=cds.MS.gene027504.t1;Parent=MS.gene027504.t1 |
| chr5.4 | exon | 25889703 | 25889903 | 25889703 | ID=MS.gene027504.t1.exon6;Parent=MS.gene027504.t1 |
| chr5.4 | CDS | 25889703 | 25889903 | 25889703 | ID=cds.MS.gene027504.t1;Parent=MS.gene027504.t1 |
| chr5.4 | exon | 25889991 | 25890203 | 25889991 | ID=MS.gene027504.t1.exon7;Parent=MS.gene027504.t1 |
| chr5.4 | CDS | 25889991 | 25890203 | 25889991 | ID=cds.MS.gene027504.t1;Parent=MS.gene027504.t1 |
| Gene Sequence |
| Protein sequence |
