Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062320.t1 | XP_003617489.1 | 98.3 | 524 | 9 | 0 | 5 | 528 | 2 | 525 | 0.00E+00 | 1103.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062320.t1 | G7K3H0 | 98.3 | 524 | 9 | 0 | 5 | 528 | 2 | 525 | 0.0e+00 | 1103.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene062320 | MS.gene027504 | PPI |
| MS.gene58585 | MS.gene062320 | PPI |
| MS.gene45154 | MS.gene062320 | PPI |
| MS.gene79003 | MS.gene062320 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062320.t1 | MTR_5g092140 | 98.282 | 524 | 9 | 0 | 5 | 528 | 2 | 525 | 0.0 | 1086 |
| MS.gene062320.t1 | MTR_5g036420 | 67.530 | 502 | 159 | 4 | 29 | 528 | 23 | 522 | 0.0 | 736 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062320.t1 | AT4G27020 | 76.515 | 528 | 119 | 1 | 1 | 528 | 1 | 523 | 0.0 | 880 |
| MS.gene062320.t1 | AT5G54870 | 76.400 | 500 | 118 | 0 | 29 | 528 | 32 | 531 | 0.0 | 854 |
| MS.gene062320.t1 | AT5G54870 | 77.830 | 424 | 94 | 0 | 105 | 528 | 2 | 425 | 0.0 | 731 |
| MS.gene062320.t1 | AT1G70160 | 66.535 | 505 | 159 | 4 | 29 | 528 | 24 | 523 | 0.0 | 730 |
Find 159 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCTTATTGTCAGATTAA+AGG | 0.135533 | 5.1:+73693156 | MS.gene062320:CDS |
| AATAAAACTGGTTCCCAATT+TGG | 0.140225 | 5.1:+73688752 | MS.gene062320:CDS |
| TAATCCCATGTTACGCGATA+TGG | 0.192142 | 5.1:-73689927 | None:intergenic |
| CTTTCATTCATGTGGGGATA+TGG | 0.233536 | 5.1:-73693219 | None:intergenic |
| TTCCACTCAGGGGTGTTGTT+AGG | 0.233690 | 5.1:-73688686 | None:intergenic |
| GAAGTCCAATATTGGGTTTA+TGG | 0.251514 | 5.1:+73690224 | MS.gene062320:CDS |
| CATCCGGTATTGGTAAATAA+AGG | 0.273049 | 5.1:-73690195 | None:intergenic |
| GGGGACCCTTCAAGCACTTT+GGG | 0.284605 | 5.1:+73690164 | MS.gene062320:CDS |
| TTTCTCCATAAACCCAATAT+TGG | 0.285275 | 5.1:-73690229 | None:intergenic |
| GAAGGGTACCACCACCAAAT+TGG | 0.294548 | 5.1:-73688766 | None:intergenic |
| TGGTGGTACCCTTCACTTAA+AGG | 0.294817 | 5.1:+73688775 | MS.gene062320:CDS |
| TATCCAAGTGACTGAATTTA+CGG | 0.303482 | 5.1:+73692436 | MS.gene062320:CDS |
| AGACTGCAACTAGCAATTCT+TGG | 0.307722 | 5.1:-73693274 | None:intergenic |
| TTGCATGTGTTATGACAATT+TGG | 0.308786 | 5.1:+73691859 | MS.gene062320:CDS |
| TCCACTCAGGGGTGTTGTTA+GGG | 0.315694 | 5.1:-73688685 | None:intergenic |
| AAGCTTTGGGTTGGGGAGTC+AGG | 0.321621 | 5.1:+73690444 | MS.gene062320:CDS |
| TTTCCTTTAATCTGACAATA+AGG | 0.325650 | 5.1:-73693159 | None:intergenic |
| GATTGGCCATGAAATTTGTT+TGG | 0.340813 | 5.1:-73688603 | None:intergenic |
| CCAACATTCCAGCTTTCATT+AGG | 0.342330 | 5.1:-73690143 | None:intergenic |
| TGGGGTGAGAAGTCCAATAT+TGG | 0.347372 | 5.1:+73690216 | MS.gene062320:CDS |
| ATGGAGTTTCATAATAAAAC+TGG | 0.351954 | 5.1:+73688740 | MS.gene062320:CDS |
| GAAGCAGCAGCAACGAAGAC+AGG | 0.354747 | 5.1:-73688659 | None:intergenic |
| CTAATGAAAGCTGGAATGTT+GGG | 0.355839 | 5.1:+73690144 | MS.gene062320:CDS |
| TGATGCCCAAACAAATTTCA+TGG | 0.360028 | 5.1:+73688597 | MS.gene062320:CDS |
| CAACTAGCAATTCTTGGTTC+TGG | 0.360207 | 5.1:-73693268 | None:intergenic |
| TTAAACCTGGCACGCATGTC+AGG | 0.360680 | 5.1:-73691190 | None:intergenic |
| AGATTCAGATGGAAAGCTTT+GGG | 0.368974 | 5.1:+73690431 | MS.gene062320:CDS |
| TAGGTCCAGTCATCCTGTTC+TGG | 0.369102 | 5.1:-73692329 | None:intergenic |
| CAGATGGAAAGCTTTGGGTT+GGG | 0.375526 | 5.1:+73690436 | MS.gene062320:CDS |
| TTGAAACACGCCCTCAGCCT+TGG | 0.375605 | 5.1:+73690268 | MS.gene062320:CDS |
| GTAAAGGAAGCAGTGCAATA+TGG | 0.382689 | 5.1:-73691165 | None:intergenic |
| ATTCAAGTCGCTTGCCATCT+TGG | 0.383512 | 5.1:+73693109 | MS.gene062320:CDS |
| GAAATTTGTTTGGGCATCAA+TGG | 0.386819 | 5.1:-73688593 | None:intergenic |
| AGTTCCAAGTCGTTTGTTCA+AGG | 0.388092 | 5.1:-73691925 | None:intergenic |
| CTTGGTTCTGGAGTACTTTG+TGG | 0.390835 | 5.1:-73693256 | None:intergenic |
| TCAACTTCCACTAAAACTTC+AGG | 0.391199 | 5.1:-73692269 | None:intergenic |
| ATTGGCCATGAAATTTGTTT+GGG | 0.394891 | 5.1:-73688602 | None:intergenic |
| TAAAGGAAGCAGTGCAATAT+GGG | 0.398702 | 5.1:-73691164 | None:intergenic |
| CTTCTCACCCCATCCGGTAT+TGG | 0.406184 | 5.1:-73690205 | None:intergenic |
| GAGATTCAGATGGAAAGCTT+TGG | 0.406334 | 5.1:+73690430 | MS.gene062320:CDS |
| AATCCCATGTTACGCGATAT+GGG | 0.407296 | 5.1:-73689926 | None:intergenic |
| TGGGTTTATGGAGAAACATA+TGG | 0.408641 | 5.1:+73690236 | MS.gene062320:CDS |
| TTCCCTTTATTTACCAATAC+CGG | 0.417978 | 5.1:+73690192 | MS.gene062320:CDS |
| CACATATTTGCAGCATATGC+AGG | 0.424075 | 5.1:-73691894 | None:intergenic |
| AGATGGAAAGCTTTGGGTTG+GGG | 0.425388 | 5.1:+73690437 | MS.gene062320:CDS |
| TCCAACTGAAAATCATGTTA+TGG | 0.433465 | 5.1:-73691267 | None:intergenic |
| TTGGTTCTGGAGTACTTTGT+GGG | 0.433813 | 5.1:-73693255 | None:intergenic |
| TGCTCATAGTTATACATGTA+TGG | 0.434455 | 5.1:+73689884 | MS.gene062320:CDS |
| TGAAACACGCCCTCAGCCTT+GGG | 0.438963 | 5.1:+73690269 | MS.gene062320:CDS |
| GGGGTGAGAAGTCCAATATT+GGG | 0.440381 | 5.1:+73690217 | MS.gene062320:CDS |
| AAGGGTACCACCACCAAATT+GGG | 0.447031 | 5.1:-73688765 | None:intergenic |
| TGGGGACCCTTCAAGCACTT+TGG | 0.453217 | 5.1:+73690163 | MS.gene062320:CDS |
| GAGTACTTTGTGGGAAGAGA+TGG | 0.463548 | 5.1:-73693246 | None:intergenic |
| TGATCTCGAGTGTATGCTCC+CGG | 0.474674 | 5.1:-73689962 | None:intergenic |
| TCAGATGGAAAGCTTTGGGT+TGG | 0.479067 | 5.1:+73690435 | MS.gene062320:CDS |
| ACTTGGATAGAACTAGCAAT+TGG | 0.481613 | 5.1:-73692422 | None:intergenic |
| ATTTGAAGGTAGAGAATTGA+AGG | 0.485169 | 5.1:-73688544 | None:intergenic |
| ATCCGGTATTGGTAAATAAA+GGG | 0.488110 | 5.1:-73690194 | None:intergenic |
| TACACCCTGACATGCGTGCC+AGG | 0.491150 | 5.1:+73691185 | MS.gene062320:CDS |
| ACTACTGACAATTCCAGAAC+AGG | 0.491280 | 5.1:+73692316 | MS.gene062320:CDS |
| GTCAGGACATGAAAATGAAA+AGG | 0.492218 | 5.1:+73690461 | MS.gene062320:CDS |
| AGCAAGTCTCGTGGGTGAAA+TGG | 0.495180 | 5.1:-73688569 | None:intergenic |
| CAACCCCATATCGCGTAACA+TGG | 0.495483 | 5.1:+73689922 | MS.gene062320:CDS |
| CCTAATGAAAGCTGGAATGT+TGG | 0.496987 | 5.1:+73690143 | MS.gene062320:CDS |
| TGGGAACTATCCACCTCCCT+TGG | 0.498783 | 5.1:+73691303 | MS.gene062320:CDS |
| ATCATGTTATGGTAACCATA+TGG | 0.500132 | 5.1:-73691256 | None:intergenic |
| TTACAAGAATCAAGCTTGGA+TGG | 0.500459 | 5.1:+73688721 | MS.gene062320:CDS |
| AGCAAGCACCTTTCCACTCA+GGG | 0.508296 | 5.1:-73688697 | None:intergenic |
| ATTGGACTTCTCACCCCATC+CGG | 0.511645 | 5.1:-73690211 | None:intergenic |
| GTGGGAGTATGCACTGAGTA+TGG | 0.512890 | 5.1:+73691225 | MS.gene062320:CDS |
| CCACTCAGGGGTGTTGTTAG+GGG | 0.515759 | 5.1:-73688684 | None:intergenic |
| TACACTCGAGATCAAGGAAT+GGG | 0.516087 | 5.1:+73689971 | MS.gene062320:CDS |
| ATATTTGTAACCCAAGGCTG+AGG | 0.517138 | 5.1:-73690279 | None:intergenic |
| CGCAGCCGTCTCATTAAACC+TGG | 0.518291 | 5.1:-73691203 | None:intergenic |
| CAAAAGCACCCCAGCGACCT+CGG | 0.519202 | 5.1:-73690350 | None:intergenic |
| AGTTGGATAGACACTTTAAG+TGG | 0.519857 | 5.1:+73691283 | MS.gene062320:CDS |
| TCTTACCACATTAGCATCCA+AGG | 0.520342 | 5.1:-73691320 | None:intergenic |
| AGTATGGATGGACAACCATA+TGG | 0.522376 | 5.1:+73691241 | MS.gene062320:CDS |
| TGATGCCGTGGGACGAGTGG+TGG | 0.523194 | 5.1:+73691110 | MS.gene062320:CDS |
| GGAGCATACACTCGAGATCA+AGG | 0.528803 | 5.1:+73689965 | MS.gene062320:CDS |
| CAATTCCAGAACAGGATGAC+TGG | 0.528886 | 5.1:+73692324 | MS.gene062320:CDS |
| TTATTTACCAATACCGGATG+GGG | 0.529182 | 5.1:+73690198 | MS.gene062320:CDS |
| AGACCTCCCAAAGTGCTTGA+AGG | 0.531952 | 5.1:-73690170 | None:intergenic |
| GGTTGCATGGTATTGTATCC+AGG | 0.532618 | 5.1:-73693198 | None:intergenic |
| GGGTTTATGGAGAAACATAT+GGG | 0.535348 | 5.1:+73690237 | MS.gene062320:CDS |
| GACCCTTCAAGCACTTTGGG+AGG | 0.536286 | 5.1:+73690167 | MS.gene062320:CDS |
| AAGCAAGCACCTTTCCACTC+AGG | 0.536832 | 5.1:-73688698 | None:intergenic |
| GCACGCATGTCAGGGTGTAA+AGG | 0.536893 | 5.1:-73691181 | None:intergenic |
| CAGCGCTATGGAGGGAGTTG+AGG | 0.537276 | 5.1:-73688625 | None:intergenic |
| CTTGCAATGTACAAGGAAGC+AGG | 0.538463 | 5.1:+73692389 | MS.gene062320:CDS |
| TTTATTTACCAATACCGGAT+GGG | 0.539825 | 5.1:+73690197 | MS.gene062320:CDS |
| ACCTCCCTTGGATGCTAATG+TGG | 0.541358 | 5.1:+73691315 | MS.gene062320:CDS |
| ATGGGCACCTTTCATTCATG+TGG | 0.542100 | 5.1:-73693227 | None:intergenic |
| TCACCGTAAATTCAGTCACT+TGG | 0.546933 | 5.1:-73692439 | None:intergenic |
| CTGCATATGCTGCAAATATG+TGG | 0.547628 | 5.1:+73691895 | MS.gene062320:CDS |
| TAAGCAAACAGCAGTGTGAC+CGG | 0.548192 | 5.1:-73690406 | None:intergenic |
| CTGAGGGCGTGTTTCAAAAG+AGG | 0.549374 | 5.1:-73690262 | None:intergenic |
| TAGAGAATTGAAGGCATGTG+AGG | 0.551481 | 5.1:-73688535 | None:intergenic |
| CTATGGAGGGAGTTGAGGAT+TGG | 0.553620 | 5.1:-73688620 | None:intergenic |
| CTTTATTTACCAATACCGGA+TGG | 0.554933 | 5.1:+73690196 | MS.gene062320:CDS |
| GGAGAATATCAACAGCGCTA+TGG | 0.554935 | 5.1:-73688637 | None:intergenic |
| TCTCCATCGTTGCACCAAGA+TGG | 0.556464 | 5.1:-73693123 | None:intergenic |
| CTGACAATAAGGAAGCTTCA+CGG | 0.560996 | 5.1:-73693148 | None:intergenic |
| GTTTAATGAGACGGCTGCGT+GGG | 0.561715 | 5.1:+73691207 | MS.gene062320:CDS |
| TGGGTTAGTGGAGCTTATGC+CGG | 0.563154 | 5.1:+73690387 | MS.gene062320:CDS |
| AAGCAGCAGCAACGAAGACA+GGG | 0.563373 | 5.1:-73688658 | None:intergenic |
| GACCTCCCAAAGTGCTTGAA+GGG | 0.565626 | 5.1:-73690169 | None:intergenic |
| AGAAAACGACCTTTAAGTGA+AGG | 0.566268 | 5.1:-73688784 | None:intergenic |
| TATTTGCAGCATATGCAGGT+TGG | 0.570186 | 5.1:-73691890 | None:intergenic |
| ACATTAGCATCCAAGGGAGG+TGG | 0.570854 | 5.1:-73691313 | None:intergenic |
| AAAACTGGTTCCCAATTTGG+TGG | 0.571897 | 5.1:+73688755 | MS.gene062320:CDS |
| AGTACTTTGTGGGAAGAGAT+GGG | 0.575143 | 5.1:-73693245 | None:intergenic |
| GAATATCAACAGCGCTATGG+AGG | 0.576259 | 5.1:-73688634 | None:intergenic |
| TGGGTGAAATGGTGATTTGA+AGG | 0.578116 | 5.1:-73688558 | None:intergenic |
| CATATCCCCACATGAATGAA+AGG | 0.581426 | 5.1:+73693220 | MS.gene062320:CDS |
| AAGTATCGAATGGAGTTACC+TGG | 0.581948 | 5.1:+73693180 | MS.gene062320:CDS |
| AGTGTTGATGACATTCACTC+TGG | 0.582494 | 5.1:+73690303 | MS.gene062320:CDS |
| TGGGCACCTTTCATTCATGT+GGG | 0.584734 | 5.1:-73693226 | None:intergenic |
| ACTGGTTCCCAATTTGGTGG+TGG | 0.586912 | 5.1:+73688758 | MS.gene062320:CDS |
| GAAAACGACCTTTAAGTGAA+GGG | 0.587116 | 5.1:-73688783 | None:intergenic |
| GTTACTTACATACTCGTACT+CGG | 0.588956 | 5.1:-73690003 | None:intergenic |
| TAAACCTGGCACGCATGTCA+GGG | 0.593054 | 5.1:-73691189 | None:intergenic |
| ATATAATTGCTATGATGCCG+TGG | 0.598457 | 5.1:+73691098 | MS.gene062320:CDS |
| GCGTGCCAGGTTTAATGAGA+CGG | 0.600559 | 5.1:+73691198 | MS.gene062320:CDS |
| GTTTGCTTAAGAGATTCAGA+TGG | 0.600599 | 5.1:+73690420 | MS.gene062320:CDS |
| CTCGAGATCAAGGAATGGGA+TGG | 0.600876 | 5.1:+73689975 | MS.gene062320:CDS |
| GATCTCGAGTGTATGCTCCC+GGG | 0.602540 | 5.1:-73689961 | None:intergenic |
| ATCAATGGAAGCAAGTCTCG+TGG | 0.602810 | 5.1:-73688578 | None:intergenic |
| AGTCGACTTGCCATCACTGT+AGG | 0.604317 | 5.1:-73692348 | None:intergenic |
| AAGTCCCACCACTCGTCCCA+CGG | 0.607412 | 5.1:-73691115 | None:intergenic |
| CTTACCACATTAGCATCCAA+GGG | 0.611835 | 5.1:-73691319 | None:intergenic |
| TAATGAAAGCTGGAATGTTG+GGG | 0.612292 | 5.1:+73690145 | MS.gene062320:CDS |
| GAGTATGCACTGAGTATGGA+TGG | 0.613805 | 5.1:+73691229 | MS.gene062320:CDS |
| GAAGCCTTGAACAAACGACT+TGG | 0.613901 | 5.1:+73691921 | MS.gene062320:CDS |
| GATTAAAGGAAAGTATCGAA+TGG | 0.614070 | 5.1:+73693170 | MS.gene062320:CDS |
| GTTGGATAGACACTTTAAGT+GGG | 0.622229 | 5.1:+73691284 | MS.gene062320:CDS |
| GATGCCGTGGGACGAGTGGT+GGG | 0.622791 | 5.1:+73691111 | MS.gene062320:CDS |
| ATACACTCGAGATCAAGGAA+TGG | 0.626787 | 5.1:+73689970 | MS.gene062320:CDS |
| TTGCCATCTTGGTGCAACGA+TGG | 0.627684 | 5.1:+73693120 | MS.gene062320:CDS |
| AATATCAACAGCGCTATGGA+GGG | 0.628565 | 5.1:-73688633 | None:intergenic |
| CATGTGGGGATATGGTTGCA+TGG | 0.631354 | 5.1:-73693211 | None:intergenic |
| AACAACACCCCTGAGTGGAA+AGG | 0.631444 | 5.1:+73688689 | MS.gene062320:CDS |
| ATCCCATGTTACGCGATATG+GGG | 0.633851 | 5.1:-73689925 | None:intergenic |
| CTATGATGCCGTGGGACGAG+TGG | 0.634113 | 5.1:+73691107 | MS.gene062320:CDS |
| AACCCCATATCGCGTAACAT+GGG | 0.637001 | 5.1:+73689923 | MS.gene062320:CDS |
| TCAATGGAAGCAAGTCTCGT+GGG | 0.647496 | 5.1:-73688577 | None:intergenic |
| GGTTTAATGAGACGGCTGCG+TGG | 0.647526 | 5.1:+73691206 | MS.gene062320:CDS |
| TATAATTGCTATGATGCCGT+GGG | 0.649188 | 5.1:+73691099 | MS.gene062320:CDS |
| ACACTGATATTTGTAACCCA+AGG | 0.652470 | 5.1:-73690285 | None:intergenic |
| TATTTGTAACCCAAGGCTGA+GGG | 0.654247 | 5.1:-73690278 | None:intergenic |
| GATGACTGGACCTACAGTGA+TGG | 0.654743 | 5.1:+73692338 | MS.gene062320:CDS |
| CCCCTAACAACACCCCTGAG+TGG | 0.657290 | 5.1:+73688684 | MS.gene062320:CDS |
| GGGCACCTTTCATTCATGTG+GGG | 0.659706 | 5.1:-73693225 | None:intergenic |
| AAAGGAAGCAGTGCAATATG+GGG | 0.678742 | 5.1:-73691163 | None:intergenic |
| CTTCCACTAAAACTTCAGGA+AGG | 0.681458 | 5.1:-73692265 | None:intergenic |
| ACCACATTAGCATCCAAGGG+AGG | 0.689570 | 5.1:-73691316 | None:intergenic |
| GCAAGCACCTTTCCACTCAG+GGG | 0.711817 | 5.1:-73688696 | None:intergenic |
| TGTGAGGAAGATGAGAAGCG+TGG | 0.715982 | 5.1:-73688519 | None:intergenic |
| TTAGTGGAAGTTGAAAAGCG+CGG | 0.757355 | 5.1:+73692278 | MS.gene062320:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTATAAAAATAATATAGAT+TGG | - | chr5.1:73692963-73692982 | None:intergenic | 10.0% |
| !!! | ATTCTGATATTAATTTTTTT+TGG | + | chr5.1:73692001-73692020 | MS.gene062320:intron | 10.0% |
| !!! | TCATTTTGTTAATTTATTTA+AGG | - | chr5.1:73692907-73692926 | None:intergenic | 10.0% |
| !! | AAAAAAAAAATCACTACAAA+TGG | - | chr5.1:73691661-73691680 | None:intergenic | 15.0% |
| !! | AATAGATAATAGAAATTCTT+AGG | + | chr5.1:73689386-73689405 | MS.gene062320:intron | 15.0% |
| !! | AGTTAAAAAGTTAATAGTTT+AGG | + | chr5.1:73692615-73692634 | MS.gene062320:intron | 15.0% |
| !! | ATAGATAATAGAAATTCTTA+GGG | + | chr5.1:73689387-73689406 | MS.gene062320:intron | 15.0% |
| !! | ATATTGTTTACTTAAGTTAA+TGG | - | chr5.1:73692209-73692228 | None:intergenic | 15.0% |
| !! | ATCTTATGATTTATATTAGA+AGG | - | chr5.1:73692059-73692078 | None:intergenic | 15.0% |
| !! | TAATGGAAAATTATATTATG+TGG | - | chr5.1:73689489-73689508 | None:intergenic | 15.0% |
| !! | TATTGTTTACTTAAGTTAAT+GGG | - | chr5.1:73692208-73692227 | None:intergenic | 15.0% |
| !!! | AAAATTTTGAATTACAGTAT+AGG | + | chr5.1:73691589-73691608 | MS.gene062320:intron | 15.0% |
| !!! | TATTTTTTTTTTACGAATCT+TGG | + | chr5.1:73691813-73691832 | MS.gene062320:intron | 15.0% |
| !! | AAAAAAAATCAGCTAATTTG+TGG | + | chr5.1:73691367-73691386 | MS.gene062320:intron | 20.0% |
| !! | AATTTCTGTTTATATTCTTC+AGG | - | chr5.1:73689318-73689337 | None:intergenic | 20.0% |
| !! | ATATCTTAATCTAGATCTAA+TGG | - | chr5.1:73689506-73689525 | None:intergenic | 20.0% |
| !! | ATTGTTTACTTAAGTTAATG+GGG | - | chr5.1:73692207-73692226 | None:intergenic | 20.0% |
| !! | GAAGAATATAAACAGAAATT+TGG | + | chr5.1:73689318-73689337 | MS.gene062320:intron | 20.0% |
| !! | TAGATAATAGAAATTCTTAG+GGG | + | chr5.1:73689388-73689407 | MS.gene062320:intron | 20.0% |
| !!! | AAACATACCTTTTTCTTTTA+GGG | + | chr5.1:73690071-73690090 | MS.gene062320:intron | 20.0% |
| !!! | AATTTCAAGATTTTGAAATC+TGG | + | chr5.1:73688957-73688976 | MS.gene062320:intron | 20.0% |
| !!! | ATCAATAATTTTACAATCTG+TGG | + | chr5.1:73691701-73691720 | MS.gene062320:intron | 20.0% |
| !!! | ATTTCAAGATTTTGAAATCT+GGG | + | chr5.1:73688958-73688977 | MS.gene062320:intron | 20.0% |
| !!! | TATTGTTCAGATTTTATGTT+AGG | + | chr5.1:73688868-73688887 | MS.gene062320:intron | 20.0% |
| !!! | TTAATTTGCATTTTGTCTAT+TGG | + | chr5.1:73690492-73690511 | MS.gene062320:intron | 20.0% |
| ! | AACAAATTGTATATGCTCAA+TGG | - | chr5.1:73692550-73692569 | None:intergenic | 25.0% |
| ! | AATAAGAGATATGTATTGTG+TGG | - | chr5.1:73691780-73691799 | None:intergenic | 25.0% |
| ! | AATGTTCAGAAACCTAAATT+TGG | + | chr5.1:73689616-73689635 | MS.gene062320:intron | 25.0% |
| ! | ACACAGAAACTAAAATCAAA+GGG | - | chr5.1:73688934-73688953 | None:intergenic | 25.0% |
| ! | ACTTCTTTGTCTTAATTTCA+TGG | + | chr5.1:73688811-73688830 | MS.gene062320:intron | 25.0% |
| ! | AGAAATGTTTGATTCTTGAA+AGG | - | chr5.1:73690583-73690602 | None:intergenic | 25.0% |
| ! | ATCTAGATTAAGATATGTGT+AGG | + | chr5.1:73689510-73689529 | MS.gene062320:intron | 25.0% |
| ! | ATGATTTCACTAAATGAAGA+TGG | - | chr5.1:73692816-73692835 | None:intergenic | 25.0% |
| ! | ATGGAGTTTCATAATAAAAC+TGG | + | chr5.1:73688740-73688759 | MS.gene062320:CDS | 25.0% |
| ! | GAACAATTCATATTATTGCT+AGG | - | chr5.1:73691471-73691490 | None:intergenic | 25.0% |
| ! | GATTTATATTAGAAGGTTGA+AGG | - | chr5.1:73692052-73692071 | None:intergenic | 25.0% |
| ! | TAAACTTATGAAATCTCCAT+AGG | - | chr5.1:73690977-73690996 | None:intergenic | 25.0% |
| ! | TATAATCTAGATTTCTTTCG+TGG | + | chr5.1:73690723-73690742 | MS.gene062320:intron | 25.0% |
| ! | TTAAGGTTTAATACTCTGAA+AGG | + | chr5.1:73689292-73689311 | MS.gene062320:intron | 25.0% |
| ! | TTTCCTTTAATCTGACAATA+AGG | - | chr5.1:73693162-73693181 | None:intergenic | 25.0% |
| !! | AACATAATTTTCTGAGTGTT+AGG | + | chr5.1:73689424-73689443 | MS.gene062320:intron | 25.0% |
| !! | AACTTGTTTACAGTTGTTAT+TGG | + | chr5.1:73689257-73689276 | MS.gene062320:intron | 25.0% |
| !! | GAAACATACCTTTTTCTTTT+AGG | + | chr5.1:73690070-73690089 | MS.gene062320:intron | 25.0% |
| !! | TTTTATACTTGCAATGTACA+AGG | + | chr5.1:73692382-73692401 | MS.gene062320:CDS | 25.0% |
| !!! | AATTTCATGGTTTTGAAATC+TGG | + | chr5.1:73688824-73688843 | MS.gene062320:intron | 25.0% |
| !!! | ATGGTTTATTGATTCTCATT+TGG | - | chr5.1:73691493-73691512 | None:intergenic | 25.0% |
| !!! | ATTTCATGGTTTTGAAATCT+GGG | + | chr5.1:73688825-73688844 | MS.gene062320:intron | 25.0% |
| !!! | TTTTGAGACTCTAGAAAAAT+GGG | + | chr5.1:73690368-73690387 | MS.gene062320:CDS | 25.0% |
| ATCATGTTATGGTAACCATA+TGG | - | chr5.1:73691259-73691278 | None:intergenic | 30.0% | |
| ATGTGTGTTAAGATATGTGT+GGG | + | chr5.1:73689547-73689566 | MS.gene062320:intron | 30.0% | |
| ATTCTTGTGTTTAACAACCT+TGG | + | chr5.1:73691002-73691021 | MS.gene062320:intron | 30.0% | |
| ATTTGAAGGTAGAGAATTGA+AGG | - | chr5.1:73688547-73688566 | None:intergenic | 30.0% | |
| CAAGTTCACTCTACATTTAA+CGG | + | chr5.1:73689709-73689728 | MS.gene062320:intron | 30.0% | |
| CACAGAAACTAAAATCAAAG+GGG | - | chr5.1:73688933-73688952 | None:intergenic | 30.0% | |
| CATTTCAAATTACAACGTGT+TGG | - | chr5.1:73689600-73689619 | None:intergenic | 30.0% | |
| CCAAATATCAATGTTTACAG+AGG | - | chr5.1:73689809-73689828 | None:intergenic | 30.0% | |
| CCTCTGTAAACATTGATATT+TGG | + | chr5.1:73689806-73689825 | MS.gene062320:intron | 30.0% | |
| CTCTGATGAAATATAGTCTA+GGG | - | chr5.1:73689684-73689703 | None:intergenic | 30.0% | |
| CTTCCTTATTGTCAGATTAA+AGG | + | chr5.1:73693156-73693175 | MS.gene062320:CDS | 30.0% | |
| GACACAGAAACTAAAATCAA+AGG | - | chr5.1:73688935-73688954 | None:intergenic | 30.0% | |
| GTTCCTATTAATTTAGTGCA+GGG | - | chr5.1:73692528-73692547 | None:intergenic | 30.0% | |
| TAAAGGTGGAAACAAACTAT+TGG | - | chr5.1:73692839-73692858 | None:intergenic | 30.0% | |
| TAAGGATCCCTAAAAGAAAA+AGG | - | chr5.1:73690081-73690100 | None:intergenic | 30.0% | |
| TATCCAAGTGACTGAATTTA+CGG | + | chr5.1:73692436-73692455 | MS.gene062320:CDS | 30.0% | |
| TATGTGTGTTAAGATATGTG+TGG | + | chr5.1:73689546-73689565 | MS.gene062320:intron | 30.0% | |
| TATTGCTAGGACTTAAGAAA+GGG | - | chr5.1:73691458-73691477 | None:intergenic | 30.0% | |
| TCCAACTGAAAATCATGTTA+TGG | - | chr5.1:73691270-73691289 | None:intergenic | 30.0% | |
| TGCTCATAGTTATACATGTA+TGG | + | chr5.1:73689884-73689903 | MS.gene062320:CDS | 30.0% | |
| TTATCTATTTGCTCTGATCT+AGG | + | chr5.1:73689854-73689873 | MS.gene062320:intron | 30.0% | |
| TTATTGCTAGGACTTAAGAA+AGG | - | chr5.1:73691459-73691478 | None:intergenic | 30.0% | |
| TTGCATGTGTTATGACAATT+TGG | + | chr5.1:73691859-73691878 | MS.gene062320:CDS | 30.0% | |
| TTTATTTACCAATACCGGAT+GGG | + | chr5.1:73690197-73690216 | MS.gene062320:CDS | 30.0% | |
| TTTCTCCATAAACCCAATAT+TGG | - | chr5.1:73690232-73690251 | None:intergenic | 30.0% | |
| ! | AAAAATCAGCTAATTTGTGG+TGG | + | chr5.1:73691370-73691389 | MS.gene062320:intron | 30.0% |
| ! | AAACTTGTTTACTGCTGTTA+TGG | + | chr5.1:73689096-73689115 | MS.gene062320:intron | 30.0% |
| ! | AACTTGTTTACTGCTGTTAT+GGG | + | chr5.1:73689097-73689116 | MS.gene062320:intron | 30.0% |
| ! | AATAAAACTGGTTCCCAATT+TGG | + | chr5.1:73688752-73688771 | MS.gene062320:CDS | 30.0% |
| ! | ACCATAACATGATTTTCAGT+TGG | + | chr5.1:73691266-73691285 | MS.gene062320:CDS | 30.0% |
| ! | ATTGGCCATGAAATTTGTTT+GGG | - | chr5.1:73688605-73688624 | None:intergenic | 30.0% |
| ! | ATTGGTCTGAAAGATAGTTA+AGG | + | chr5.1:73689275-73689294 | MS.gene062320:intron | 30.0% |
| ! | CAACTAAAATACGTGTTTTC+AGG | + | chr5.1:73692689-73692708 | MS.gene062320:intron | 30.0% |
| ! | TATTAGAAGGTTGAAGGTAT+TGG | - | chr5.1:73692046-73692065 | None:intergenic | 30.0% |
| ! | TCAATTTTCCTAATGAAAGC+TGG | + | chr5.1:73690135-73690154 | MS.gene062320:CDS | 30.0% |
| ! | TTCCCTTTATTTACCAATAC+CGG | + | chr5.1:73690192-73690211 | MS.gene062320:CDS | 30.0% |
| ! | TTTGAGTTATTGGTGGTAAA+TGG | + | chr5.1:73690771-73690790 | MS.gene062320:intron | 30.0% |
| ! | TTTGTAGAATTTTCTTGACC+AGG | + | chr5.1:73693015-73693034 | MS.gene062320:intron | 30.0% |
| ! | TTTTCACCTGATTGCAAAAA+GGG | - | chr5.1:73690104-73690123 | None:intergenic | 30.0% |
| ! | TTTTTCACCTGATTGCAAAA+AGG | - | chr5.1:73690105-73690124 | None:intergenic | 30.0% |
| !! | ATCACTACAAATGGTCTTAT+TGG | - | chr5.1:73691652-73691671 | None:intergenic | 30.0% |
| !! | ATCCGGTATTGGTAAATAAA+GGG | - | chr5.1:73690197-73690216 | None:intergenic | 30.0% |
| !! | GATTAAAGGAAAGTATCGAA+TGG | + | chr5.1:73693170-73693189 | MS.gene062320:CDS | 30.0% |
| !! | GCATATACAATTTGTTACCT+TGG | + | chr5.1:73692554-73692573 | MS.gene062320:intron | 30.0% |
| !! | TCACTACAAATGGTCTTATT+GGG | - | chr5.1:73691651-73691670 | None:intergenic | 30.0% |
| !! | TTTCATTACTGTGTTGTTTG+AGG | + | chr5.1:73692651-73692670 | MS.gene062320:intron | 30.0% |
| !!! | CTTTTGAGACTCTAGAAAAA+TGG | + | chr5.1:73690367-73690386 | MS.gene062320:CDS | 30.0% |
| !!! | GAAAACACGTATTTTAGTTG+AGG | - | chr5.1:73692689-73692708 | None:intergenic | 30.0% |
| AAATCACGAGTTCAAGACTA+TGG | - | chr5.1:73691512-73691531 | None:intergenic | 35.0% | |
| AATGACACACACACAGATAT+TGG | - | chr5.1:73691984-73692003 | None:intergenic | 35.0% | |
| ACACTGATATTTGTAACCCA+AGG | - | chr5.1:73690288-73690307 | None:intergenic | 35.0% | |
| ACTAGCAATCTATCAGTACT+GGG | + | chr5.1:73692104-73692123 | MS.gene062320:intron | 35.0% | |
| ACTTGGATAGAACTAGCAAT+TGG | - | chr5.1:73692425-73692444 | None:intergenic | 35.0% | |
| AGAAAACGACCTTTAAGTGA+AGG | - | chr5.1:73688787-73688806 | None:intergenic | 35.0% | |
| AGATTCAGATGGAAAGCTTT+GGG | + | chr5.1:73690431-73690450 | MS.gene062320:CDS | 35.0% | |
| AGTTGGATAGACACTTTAAG+TGG | + | chr5.1:73691283-73691302 | MS.gene062320:CDS | 35.0% | |
| ATAAGCTTTCTACGCAAGTT+TGG | + | chr5.1:73691546-73691565 | MS.gene062320:intron | 35.0% | |
| ATAGAAATTCTTAGGGGAGT+TGG | + | chr5.1:73689394-73689413 | MS.gene062320:intron | 35.0% | |
| ATATAATTGCTATGATGCCG+TGG | + | chr5.1:73691098-73691117 | MS.gene062320:CDS | 35.0% | |
| ATCAATGTTTACAGAGGAGA+GGG | - | chr5.1:73689803-73689822 | None:intergenic | 35.0% | |
| CAACACAGTAATGAAACTTC+TGG | - | chr5.1:73692647-73692666 | None:intergenic | 35.0% | |
| CAGAAAGAAGAAACACAGAA+AGG | - | chr5.1:73692234-73692253 | None:intergenic | 35.0% | |
| CCTAGACTATATTTCATCAG+AGG | + | chr5.1:73689682-73689701 | MS.gene062320:intron | 35.0% | |
| CCTCTGATGAAATATAGTCT+AGG | - | chr5.1:73689685-73689704 | None:intergenic | 35.0% | |
| CTAATGAAAGCTGGAATGTT+GGG | + | chr5.1:73690144-73690163 | MS.gene062320:CDS | 35.0% | |
| GAAAACGACCTTTAAGTGAA+GGG | - | chr5.1:73688786-73688805 | None:intergenic | 35.0% | |
| GAAGTCCAATATTGGGTTTA+TGG | + | chr5.1:73690224-73690243 | MS.gene062320:CDS | 35.0% | |
| GAGTTGTAGTTTGGTAGATT+TGG | + | chr5.1:73689569-73689588 | MS.gene062320:intron | 35.0% | |
| GATGATGTAGTGAAGAGAAA+TGG | - | chr5.1:73690028-73690047 | None:intergenic | 35.0% | |
| GCATATGTCCTACTTCATAA+AGG | - | chr5.1:73692856-73692875 | None:intergenic | 35.0% | |
| GGGTTTATGGAGAAACATAT+GGG | + | chr5.1:73690237-73690256 | MS.gene062320:CDS | 35.0% | |
| GGTTCCTATTAATTTAGTGC+AGG | - | chr5.1:73692529-73692548 | None:intergenic | 35.0% | |
| GTCAGGACATGAAAATGAAA+AGG | + | chr5.1:73690461-73690480 | MS.gene062320:CDS | 35.0% | |
| GTTACTTACATACTCGTACT+CGG | - | chr5.1:73690006-73690025 | None:intergenic | 35.0% | |
| GTTCAGAAACCTAAATTTGG+TGG | + | chr5.1:73689619-73689638 | MS.gene062320:intron | 35.0% | |
| GTTGGATAGACACTTTAAGT+GGG | + | chr5.1:73691284-73691303 | MS.gene062320:CDS | 35.0% | |
| GTTTGCTTAAGAGATTCAGA+TGG | + | chr5.1:73690420-73690439 | MS.gene062320:CDS | 35.0% | |
| TAAAGGAAGCAGTGCAATAT+GGG | - | chr5.1:73691167-73691186 | None:intergenic | 35.0% | |
| TAATGAAAGCTGGAATGTTG+GGG | + | chr5.1:73690145-73690164 | MS.gene062320:CDS | 35.0% | |
| TACAAACAAAAGAGAGAGGA+AGG | - | chr5.1:73691070-73691089 | None:intergenic | 35.0% | |
| TATAATTGCTATGATGCCGT+GGG | + | chr5.1:73691099-73691118 | MS.gene062320:CDS | 35.0% | |
| TATCAATGTTTACAGAGGAG+AGG | - | chr5.1:73689804-73689823 | None:intergenic | 35.0% | |
| TATGTCCTACTTCATAAAGG+TGG | - | chr5.1:73692853-73692872 | None:intergenic | 35.0% | |
| TATGTGTAGGAGTTGTAGTT+TGG | + | chr5.1:73689523-73689542 | MS.gene062320:intron | 35.0% | |
| TCAACTTCCACTAAAACTTC+AGG | - | chr5.1:73692272-73692291 | None:intergenic | 35.0% | |
| TCAAGACTTAATCCTCTGAA+AGG | + | chr5.1:73689132-73689151 | MS.gene062320:intron | 35.0% | |
| TCACCCTGCACTAAATTAAT+AGG | + | chr5.1:73692522-73692541 | MS.gene062320:intron | 35.0% | |
| TGATGCCCAAACAAATTTCA+TGG | + | chr5.1:73688597-73688616 | MS.gene062320:CDS | 35.0% | |
| TGCAATCAGGTGAAAAATCA+CGG | + | chr5.1:73690108-73690127 | MS.gene062320:intron | 35.0% | |
| TGGGTTTATGGAGAAACATA+TGG | + | chr5.1:73690236-73690255 | MS.gene062320:CDS | 35.0% | |
| TGTTTCCACCTTTATGAAGT+AGG | + | chr5.1:73692845-73692864 | MS.gene062320:intron | 35.0% | |
| TTACAAGAATCAAGCTTGGA+TGG | + | chr5.1:73688721-73688740 | MS.gene062320:CDS | 35.0% | |
| TTATTTACCAATACCGGATG+GGG | + | chr5.1:73690198-73690217 | MS.gene062320:CDS | 35.0% | |
| TTCACTAAATGAAGATGGTG+TGG | - | chr5.1:73692811-73692830 | None:intergenic | 35.0% | |
| TTGGATTCAAAGAGACTGAT+TGG | + | chr5.1:73689825-73689844 | MS.gene062320:intron | 35.0% | |
| TTTCTTGACCAGGTTCTTAT+GGG | + | chr5.1:73693025-73693044 | MS.gene062320:intron | 35.0% | |
| ! | CACTCACAAGAGTATACTTA+GGG | - | chr5.1:73690943-73690962 | None:intergenic | 35.0% |
| ! | CTTTATTTACCAATACCGGA+TGG | + | chr5.1:73690196-73690215 | MS.gene062320:CDS | 35.0% |
| ! | GAAATTTGTTTGGGCATCAA+TGG | - | chr5.1:73688596-73688615 | None:intergenic | 35.0% |
| ! | GATTGGCCATGAAATTTGTT+TGG | - | chr5.1:73688606-73688625 | None:intergenic | 35.0% |
| ! | GCTTTTACAAGAATCAAGCT+TGG | + | chr5.1:73688717-73688736 | MS.gene062320:CDS | 35.0% |
| ! | GGATTATTATTTTCTGTCCC+GGG | + | chr5.1:73689944-73689963 | MS.gene062320:CDS | 35.0% |
| ! | GGGATTATTATTTTCTGTCC+CGG | + | chr5.1:73689943-73689962 | MS.gene062320:CDS | 35.0% |
| ! | TGTAGTTTGGTAGATTTGGT+TGG | + | chr5.1:73689573-73689592 | MS.gene062320:intron | 35.0% |
| ! | TTGTGCAGTTTTACAACTCT+CGG | + | chr5.1:73690843-73690862 | MS.gene062320:intron | 35.0% |
| ! | TTTTCTTGACCAGGTTCTTA+TGG | + | chr5.1:73693024-73693043 | MS.gene062320:intron | 35.0% |
| !! | ACTCTAGAAAAATGGGTTAG+TGG | + | chr5.1:73690375-73690394 | MS.gene062320:CDS | 35.0% |
| !! | CATCCGGTATTGGTAAATAA+AGG | - | chr5.1:73690198-73690217 | None:intergenic | 35.0% |
| !! | GGACTTGTTGTATTGAACTT+TGG | + | chr5.1:73688889-73688908 | MS.gene062320:intron | 35.0% |
| !! | GGTTGTTGACTTTGAGTTAT+TGG | + | chr5.1:73690761-73690780 | MS.gene062320:intron | 35.0% |
| !! | TCCTCTCTCTTTTGTTTGTA+GGG | + | chr5.1:73691070-73691089 | MS.gene062320:intron | 35.0% |
| !! | TGTTGACTTTGAGTTATTGG+TGG | + | chr5.1:73690764-73690783 | MS.gene062320:intron | 35.0% |
| !! | TTCCTCTCTCTTTTGTTTGT+AGG | + | chr5.1:73691069-73691088 | MS.gene062320:intron | 35.0% |
| !!! | CATTTACTCTGCTACTTTTC+AGG | + | chr5.1:73691836-73691855 | MS.gene062320:intron | 35.0% |
| AAAACAAGCCCATAAGAACC+TGG | - | chr5.1:73693036-73693055 | None:intergenic | 40.0% | |
| AAAGGAAGCAGTGCAATATG+GGG | - | chr5.1:73691166-73691185 | None:intergenic | 40.0% | |
| AATATCAACAGCGCTATGGA+GGG | - | chr5.1:73688636-73688655 | None:intergenic | 40.0% | |
| AATCCCATGTTACGCGATAT+GGG | - | chr5.1:73689929-73689948 | None:intergenic | 40.0% | |
| AATCTTGTCAGCATCAGAGT+AGG | + | chr5.1:73690653-73690672 | MS.gene062320:intron | 40.0% | |
| ACCAGGTTACCACCAAATTT+AGG | - | chr5.1:73689631-73689650 | None:intergenic | 40.0% | |
| ACCTGATTGCAAAAAGGGTA+AGG | - | chr5.1:73690099-73690118 | None:intergenic | 40.0% | |
| ACTACTGACAATTCCAGAAC+AGG | + | chr5.1:73692316-73692335 | MS.gene062320:CDS | 40.0% | |
| AGTACTTTGTGGGAAGAGAT+GGG | - | chr5.1:73693248-73693267 | None:intergenic | 40.0% | |
| AGTATGGATGGACAACCATA+TGG | + | chr5.1:73691241-73691260 | MS.gene062320:CDS | 40.0% | |
| AGTTCCAAGTCGTTTGTTCA+AGG | - | chr5.1:73691928-73691947 | None:intergenic | 40.0% | |
| ATACACTCGAGATCAAGGAA+TGG | + | chr5.1:73689970-73689989 | MS.gene062320:CDS | 40.0% | |
| ATATTTGTAACCCAAGGCTG+AGG | - | chr5.1:73690282-73690301 | None:intergenic | 40.0% | |
| ATGGTAATTTCTGAACTCCG+TGG | + | chr5.1:73690795-73690814 | MS.gene062320:intron | 40.0% | |
| CAAGAGAAAATGTACAGCCA+AGG | - | chr5.1:73692574-73692593 | None:intergenic | 40.0% | |
| CACATATTTGCAGCATATGC+AGG | - | chr5.1:73691897-73691916 | None:intergenic | 40.0% | |
| CATATCCCCACATGAATGAA+AGG | + | chr5.1:73693220-73693239 | MS.gene062320:CDS | 40.0% | |
| CCAACATTCCAGCTTTCATT+AGG | - | chr5.1:73690146-73690165 | None:intergenic | 40.0% | |
| CCTAATGAAAGCTGGAATGT+TGG | + | chr5.1:73690143-73690162 | MS.gene062320:CDS | 40.0% | |
| CTCTGATGCTGACAAGATTA+AGG | - | chr5.1:73690652-73690671 | None:intergenic | 40.0% | |
| CTGACAATAAGGAAGCTTCA+CGG | - | chr5.1:73693151-73693170 | None:intergenic | 40.0% | |
| CTGCACAAATGAGTTAACTC+AGG | - | chr5.1:73690831-73690850 | None:intergenic | 40.0% | |
| CTGCATATGCTGCAAATATG+TGG | + | chr5.1:73691895-73691914 | MS.gene062320:CDS | 40.0% | |
| CTGTGTTTCTTCTTTCTGCA+GGG | + | chr5.1:73692236-73692255 | MS.gene062320:intron | 40.0% | |
| CTTACCACATTAGCATCCAA+GGG | - | chr5.1:73691322-73691341 | None:intergenic | 40.0% | |
| CTTCCACTAAAACTTCAGGA+AGG | - | chr5.1:73692268-73692287 | None:intergenic | 40.0% | |
| CTTTCATTCATGTGGGGATA+TGG | - | chr5.1:73693222-73693241 | None:intergenic | 40.0% | |
| GACTAGCAATCTATCAGTAC+TGG | + | chr5.1:73692103-73692122 | MS.gene062320:intron | 40.0% | |
| GAGATTCAGATGGAAAGCTT+TGG | + | chr5.1:73690430-73690449 | MS.gene062320:CDS | 40.0% | |
| GATGCTGTCCATTACTAAGT+CGG | + | chr5.1:73692758-73692777 | MS.gene062320:intron | 40.0% | |
| GCAATCAGGTGAAAAATCAC+GGG | + | chr5.1:73690109-73690128 | MS.gene062320:intron | 40.0% | |
| GTAAAGGAAGCAGTGCAATA+TGG | - | chr5.1:73691168-73691187 | None:intergenic | 40.0% | |
| TAATCCCATGTTACGCGATA+TGG | - | chr5.1:73689930-73689949 | None:intergenic | 40.0% | |
| TACACTCGAGATCAAGGAAT+GGG | + | chr5.1:73689971-73689990 | MS.gene062320:CDS | 40.0% | |
| TATGTGTGGGAGTTGTAGTT+TGG | + | chr5.1:73689560-73689579 | MS.gene062320:intron | 40.0% | |
| TATTTGCAGCATATGCAGGT+TGG | - | chr5.1:73691893-73691912 | None:intergenic | 40.0% | |
| TATTTGTAACCCAAGGCTGA+GGG | - | chr5.1:73690281-73690300 | None:intergenic | 40.0% | |
| TCACCGTAAATTCAGTCACT+TGG | - | chr5.1:73692442-73692461 | None:intergenic | 40.0% | |
| TCCCTACAAACAAAAGAGAG+AGG | - | chr5.1:73691074-73691093 | None:intergenic | 40.0% | |
| TCGTGGCATATGATTCATCA+TGG | + | chr5.1:73690740-73690759 | MS.gene062320:intron | 40.0% | |
| TCTGTGTTTCTTCTTTCTGC+AGG | + | chr5.1:73692235-73692254 | MS.gene062320:intron | 40.0% | |
| TCTTACCACATTAGCATCCA+AGG | - | chr5.1:73691323-73691342 | None:intergenic | 40.0% | |
| TGGGTGAAATGGTGATTTGA+AGG | - | chr5.1:73688561-73688580 | None:intergenic | 40.0% | |
| TGTGTTTCTTCTTTCTGCAG+GGG | + | chr5.1:73692237-73692256 | MS.gene062320:intron | 40.0% | |
| TTAGTGGAAGTTGAAAAGCG+CGG | + | chr5.1:73692278-73692297 | MS.gene062320:CDS | 40.0% | |
| ! | AAAACTGGTTCCCAATTTGG+TGG | + | chr5.1:73688755-73688774 | MS.gene062320:CDS | 40.0% |
| ! | ACCTAAATTTGGTGGTAACC+TGG | + | chr5.1:73689627-73689646 | MS.gene062320:intron | 40.0% |
| ! | ACTCAGGAGTTTGATAACCA+CGG | - | chr5.1:73690815-73690834 | None:intergenic | 40.0% |
| ! | GCACTCACAAGAGTATACTT+AGG | - | chr5.1:73690944-73690963 | None:intergenic | 40.0% |
| ! | GTTATTGGTGGTAAATGGCA+TGG | + | chr5.1:73690776-73690795 | MS.gene062320:intron | 40.0% |
| ! | TAGAGAATTGAAGGCATGTG+AGG | - | chr5.1:73688538-73688557 | None:intergenic | 40.0% |
| ! | TCCTTACCCTTTTTGCAATC+AGG | + | chr5.1:73690095-73690114 | MS.gene062320:intron | 40.0% |
| !! | AAGTATCGAATGGAGTTACC+TGG | + | chr5.1:73693180-73693199 | MS.gene062320:CDS | 40.0% |
| !! | AGTGTTGATGACATTCACTC+TGG | + | chr5.1:73690303-73690322 | MS.gene062320:CDS | 40.0% |
| !! | CTACAAATGGTCTTATTGGG+TGG | - | chr5.1:73691648-73691667 | None:intergenic | 40.0% |
| !! | CTTGCTGTTTCAAAAATCCG+AGG | + | chr5.1:73690333-73690352 | MS.gene062320:CDS | 40.0% |
| !! | TGACCTTCCTGAAGTTTTAG+TGG | + | chr5.1:73692262-73692281 | MS.gene062320:CDS | 40.0% |
| !! | TTGGTTCTGGAGTACTTTGT+GGG | - | chr5.1:73693258-73693277 | None:intergenic | 40.0% |
| !!! | CTCGGATTTTTGAAACAGCA+AGG | - | chr5.1:73690335-73690354 | None:intergenic | 40.0% |
| AACCCCATATCGCGTAACAT+GGG | + | chr5.1:73689923-73689942 | MS.gene062320:CDS | 45.0% | |
| ATCAATGGAAGCAAGTCTCG+TGG | - | chr5.1:73688581-73688600 | None:intergenic | 45.0% | |
| ATCCCATGTTACGCGATATG+GGG | - | chr5.1:73689928-73689947 | None:intergenic | 45.0% | |
| ATGGGCACCTTTCATTCATG+TGG | - | chr5.1:73693230-73693249 | None:intergenic | 45.0% | |
| ATTCAAGTCGCTTGCCATCT+TGG | + | chr5.1:73693109-73693128 | MS.gene062320:CDS | 45.0% | |
| CAATTCCAGAACAGGATGAC+TGG | + | chr5.1:73692324-73692343 | MS.gene062320:CDS | 45.0% | |
| CTTGCAATGTACAAGGAAGC+AGG | + | chr5.1:73692389-73692408 | MS.gene062320:CDS | 45.0% | |
| GAAGCCTTGAACAAACGACT+TGG | + | chr5.1:73691921-73691940 | MS.gene062320:CDS | 45.0% | |
| GAATATCAACAGCGCTATGG+AGG | - | chr5.1:73688637-73688656 | None:intergenic | 45.0% | |
| GAGATCAGATCGTTTGAGCA+TGG | + | chr5.1:73692925-73692944 | MS.gene062320:intron | 45.0% | |
| GAGTACTTTGTGGGAAGAGA+TGG | - | chr5.1:73693249-73693268 | None:intergenic | 45.0% | |
| GAGTATGCACTGAGTATGGA+TGG | + | chr5.1:73691229-73691248 | MS.gene062320:CDS | 45.0% | |
| GGAGAATATCAACAGCGCTA+TGG | - | chr5.1:73688640-73688659 | None:intergenic | 45.0% | |
| GGGGTGAGAAGTCCAATATT+GGG | + | chr5.1:73690217-73690236 | MS.gene062320:CDS | 45.0% | |
| GGTTGCATGGTATTGTATCC+AGG | - | chr5.1:73693201-73693220 | None:intergenic | 45.0% | |
| TAACACTTCACGCCTTTCAG+AGG | - | chr5.1:73689147-73689166 | None:intergenic | 45.0% | |
| TAAGCAAACAGCAGTGTGAC+CGG | - | chr5.1:73690409-73690428 | None:intergenic | 45.0% | |
| TATGCTGCAGAGTTTCACCA+AGG | - | chr5.1:73691022-73691041 | None:intergenic | 45.0% | |
| TCAATGGAAGCAAGTCTCGT+GGG | - | chr5.1:73688580-73688599 | None:intergenic | 45.0% | |
| TGGGCACCTTTCATTCATGT+GGG | - | chr5.1:73693229-73693248 | None:intergenic | 45.0% | |
| TGGGGTGAGAAGTCCAATAT+TGG | + | chr5.1:73690216-73690235 | MS.gene062320:CDS | 45.0% | |
| TGGTGGTACCCTTCACTTAA+AGG | + | chr5.1:73688775-73688794 | MS.gene062320:CDS | 45.0% | |
| TTCAAAAATCCGAGGTCGCT+GGG | + | chr5.1:73690341-73690360 | MS.gene062320:CDS | 45.0% | |
| TTGGAGCACGAGACAAGTAA+AGG | - | chr5.1:73691965-73691984 | None:intergenic | 45.0% | |
| TTTCAAAAATCCGAGGTCGC+TGG | + | chr5.1:73690340-73690359 | MS.gene062320:CDS | 45.0% | |
| ! | AACTGGCTCCGACTTAGTAA+TGG | - | chr5.1:73692769-73692788 | None:intergenic | 45.0% |
| !! | AAGGGTACCACCACCAAATT+GGG | - | chr5.1:73688768-73688787 | None:intergenic | 45.0% |
| !! | AGATGGAAAGCTTTGGGTTG+GGG | + | chr5.1:73690437-73690456 | MS.gene062320:CDS | 45.0% |
| !! | CAGATGGAAAGCTTTGGGTT+GGG | + | chr5.1:73690436-73690455 | MS.gene062320:CDS | 45.0% |
| !! | CTTGGTTCTGGAGTACTTTG+TGG | - | chr5.1:73693259-73693278 | None:intergenic | 45.0% |
| !! | TCAGATGGAAAGCTTTGGGT+TGG | + | chr5.1:73690435-73690454 | MS.gene062320:CDS | 45.0% |
| !!! | TTATAAACATAAATTTTTAT+CGG | - | chr5.1:73690611-73690630 | None:intergenic | 5.0% |
| AACAACACCCCTGAGTGGAA+AGG | + | chr5.1:73688689-73688708 | MS.gene062320:CDS | 50.0% | |
| AACCTGGTAAGACCAGCGAA+AGG | + | chr5.1:73689643-73689662 | MS.gene062320:intron | 50.0% | |
| AAGCAAGCACCTTTCCACTC+AGG | - | chr5.1:73688701-73688720 | None:intergenic | 50.0% | |
| AAGCAGCAGCAACGAAGACA+GGG | - | chr5.1:73688661-73688680 | None:intergenic | 50.0% | |
| ACATTAGCATCCAAGGGAGG+TGG | - | chr5.1:73691316-73691335 | None:intergenic | 50.0% | |
| ACCACATTAGCATCCAAGGG+AGG | - | chr5.1:73691319-73691338 | None:intergenic | 50.0% | |
| ACCTCCCTTGGATGCTAATG+TGG | + | chr5.1:73691315-73691334 | MS.gene062320:CDS | 50.0% | |
| ACCTGGTAAGACCAGCGAAA+GGG | + | chr5.1:73689644-73689663 | MS.gene062320:intron | 50.0% | |
| AGCAAGCACCTTTCCACTCA+GGG | - | chr5.1:73688700-73688719 | None:intergenic | 50.0% | |
| AGCAAGTCTCGTGGGTGAAA+TGG | - | chr5.1:73688572-73688591 | None:intergenic | 50.0% | |
| ATTGGACTTCTCACCCCATC+CGG | - | chr5.1:73690214-73690233 | None:intergenic | 50.0% | |
| CAACCCCATATCGCGTAACA+TGG | + | chr5.1:73689922-73689941 | MS.gene062320:CDS | 50.0% | |
| CATGTGGGGATATGGTTGCA+TGG | - | chr5.1:73693214-73693233 | None:intergenic | 50.0% | |
| CTATGGAGGGAGTTGAGGAT+TGG | - | chr5.1:73688623-73688642 | None:intergenic | 50.0% | |
| CTCGAGATCAAGGAATGGGA+TGG | + | chr5.1:73689975-73689994 | MS.gene062320:CDS | 50.0% | |
| GAGTGCATGAGTAGAGCCTA+TGG | + | chr5.1:73690958-73690977 | MS.gene062320:intron | 50.0% | |
| GATGACTGGACCTACAGTGA+TGG | + | chr5.1:73692338-73692357 | MS.gene062320:CDS | 50.0% | |
| GCGTGCCAGGTTTAATGAGA+CGG | + | chr5.1:73691198-73691217 | MS.gene062320:CDS | 50.0% | |
| GGAGCATACACTCGAGATCA+AGG | + | chr5.1:73689965-73689984 | MS.gene062320:CDS | 50.0% | |
| GGGCACCTTTCATTCATGTG+GGG | - | chr5.1:73693228-73693247 | None:intergenic | 50.0% | |
| GTTTAATGAGACGGCTGCGT+GGG | + | chr5.1:73691207-73691226 | MS.gene062320:CDS | 50.0% | |
| TAAACCTGGCACGCATGTCA+GGG | - | chr5.1:73691192-73691211 | None:intergenic | 50.0% | |
| TAGGTCCAGTCATCCTGTTC+TGG | - | chr5.1:73692332-73692351 | None:intergenic | 50.0% | |
| TCAAAAATCCGAGGTCGCTG+GGG | + | chr5.1:73690342-73690361 | MS.gene062320:CDS | 50.0% | |
| TCTCCATCGTTGCACCAAGA+TGG | - | chr5.1:73693126-73693145 | None:intergenic | 50.0% | |
| TGATCTCGAGTGTATGCTCC+CGG | - | chr5.1:73689965-73689984 | None:intergenic | 50.0% | |
| TGTGAGGAAGATGAGAAGCG+TGG | - | chr5.1:73688522-73688541 | None:intergenic | 50.0% | |
| TTAAACCTGGCACGCATGTC+AGG | - | chr5.1:73691193-73691212 | None:intergenic | 50.0% | |
| ! | ACTGGTTCCCAATTTGGTGG+TGG | + | chr5.1:73688758-73688777 | MS.gene062320:CDS | 50.0% |
| ! | AGACCTCCCAAAGTGCTTGA+AGG | - | chr5.1:73690173-73690192 | None:intergenic | 50.0% |
| ! | CTGAGGGCGTGTTTCAAAAG+AGG | - | chr5.1:73690265-73690284 | None:intergenic | 50.0% |
| ! | GACCTCCCAAAGTGCTTGAA+GGG | - | chr5.1:73690172-73690191 | None:intergenic | 50.0% |
| ! | GTGGGAGTATGCACTGAGTA+TGG | + | chr5.1:73691225-73691244 | MS.gene062320:CDS | 50.0% |
| ! | TTGCCATCTTGGTGCAACGA+TGG | + | chr5.1:73693120-73693139 | MS.gene062320:CDS | 50.0% |
| !! | AGTCGACTTGCCATCACTGT+AGG | - | chr5.1:73692351-73692370 | None:intergenic | 50.0% |
| !! | GAAGGGTACCACCACCAAAT+TGG | - | chr5.1:73688769-73688788 | None:intergenic | 50.0% |
| !! | TCCACTCAGGGGTGTTGTTA+GGG | - | chr5.1:73688688-73688707 | None:intergenic | 50.0% |
| !! | TGGGTTAGTGGAGCTTATGC+CGG | + | chr5.1:73690387-73690406 | MS.gene062320:CDS | 50.0% |
| !! | TTCCACTCAGGGGTGTTGTT+AGG | - | chr5.1:73688689-73688708 | None:intergenic | 50.0% |
| CGCAGCCGTCTCATTAAACC+TGG | - | chr5.1:73691206-73691225 | None:intergenic | 55.0% | |
| CTTCTCACCCCATCCGGTAT+TGG | - | chr5.1:73690208-73690227 | None:intergenic | 55.0% | |
| GAAGCAGCAGCAACGAAGAC+AGG | - | chr5.1:73688662-73688681 | None:intergenic | 55.0% | |
| GACCCTTCAAGCACTTTGGG+AGG | + | chr5.1:73690167-73690186 | MS.gene062320:CDS | 55.0% | |
| GATCTCGAGTGTATGCTCCC+GGG | - | chr5.1:73689964-73689983 | None:intergenic | 55.0% | |
| GCAAGCACCTTTCCACTCAG+GGG | - | chr5.1:73688699-73688718 | None:intergenic | 55.0% | |
| GCACGCATGTCAGGGTGTAA+AGG | - | chr5.1:73691184-73691203 | None:intergenic | 55.0% | |
| GGGGACCCTTCAAGCACTTT+GGG | + | chr5.1:73690164-73690183 | MS.gene062320:CDS | 55.0% | |
| GGTTTAATGAGACGGCTGCG+TGG | + | chr5.1:73691206-73691225 | MS.gene062320:CDS | 55.0% | |
| TAATTGCCTCGCCCTTTCGC+TGG | - | chr5.1:73689658-73689677 | None:intergenic | 55.0% | |
| TGAAACACGCCCTCAGCCTT+GGG | + | chr5.1:73690269-73690288 | MS.gene062320:CDS | 55.0% | |
| TGGGAACTATCCACCTCCCT+TGG | + | chr5.1:73691303-73691322 | MS.gene062320:CDS | 55.0% | |
| TGGGGACCCTTCAAGCACTT+TGG | + | chr5.1:73690163-73690182 | MS.gene062320:CDS | 55.0% | |
| TTGAAACACGCCCTCAGCCT+TGG | + | chr5.1:73690268-73690287 | MS.gene062320:CDS | 55.0% | |
| !! | AAGCTTTGGGTTGGGGAGTC+AGG | + | chr5.1:73690444-73690463 | MS.gene062320:CDS | 55.0% |
| !! | CCACTCAGGGGTGTTGTTAG+GGG | - | chr5.1:73688687-73688706 | None:intergenic | 55.0% |
| AAGTCCCACCACTCGTCCCA+CGG | - | chr5.1:73691118-73691137 | None:intergenic | 60.0% | |
| CAGCGCTATGGAGGGAGTTG+AGG | - | chr5.1:73688628-73688647 | None:intergenic | 60.0% | |
| CCCCTAACAACACCCCTGAG+TGG | + | chr5.1:73688684-73688703 | MS.gene062320:CDS | 60.0% | |
| CTATGATGCCGTGGGACGAG+TGG | + | chr5.1:73691107-73691126 | MS.gene062320:CDS | 60.0% | |
| GTAAGACCAGCGAAAGGGCG+AGG | + | chr5.1:73689649-73689668 | MS.gene062320:intron | 60.0% | |
| GTCGGAGCCAGTTGTGCGAA+CGG | + | chr5.1:73692776-73692795 | MS.gene062320:intron | 60.0% | |
| TACACCCTGACATGCGTGCC+AGG | + | chr5.1:73691185-73691204 | MS.gene062320:CDS | 60.0% | |
| ! | ACCAGTGCCGTTCGCACAAC+TGG | - | chr5.1:73692786-73692805 | None:intergenic | 60.0% |
| !! | CAAAAGCACCCCAGCGACCT+CGG | - | chr5.1:73690353-73690372 | None:intergenic | 60.0% |
| !! | GCCCTTTCGCTGGTCTTACC+AGG | - | chr5.1:73689648-73689667 | None:intergenic | 60.0% |
| GATGCCGTGGGACGAGTGGT+GGG | + | chr5.1:73691111-73691130 | MS.gene062320:CDS | 65.0% | |
| GCCAGTTGTGCGAACGGCAC+TGG | + | chr5.1:73692782-73692801 | MS.gene062320:intron | 65.0% | |
| TGATGCCGTGGGACGAGTGG+TGG | + | chr5.1:73691110-73691129 | MS.gene062320:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 73688473 | 73693287 | 73688473 | ID=MS.gene062320 |
| chr5.1 | mRNA | 73688473 | 73693287 | 73688473 | ID=MS.gene062320.t1;Parent=MS.gene062320 |
| chr5.1 | exon | 73688473 | 73688796 | 73688473 | ID=MS.gene062320.t1.exon1;Parent=MS.gene062320.t1 |
| chr5.1 | CDS | 73688473 | 73688796 | 73688473 | ID=cds.MS.gene062320.t1;Parent=MS.gene062320.t1 |
| chr5.1 | exon | 73689876 | 73690016 | 73689876 | ID=MS.gene062320.t1.exon2;Parent=MS.gene062320.t1 |
| chr5.1 | CDS | 73689876 | 73690016 | 73689876 | ID=cds.MS.gene062320.t1;Parent=MS.gene062320.t1 |
| chr5.1 | exon | 73690117 | 73690482 | 73690117 | ID=MS.gene062320.t1.exon3;Parent=MS.gene062320.t1 |
| chr5.1 | CDS | 73690117 | 73690482 | 73690117 | ID=cds.MS.gene062320.t1;Parent=MS.gene062320.t1 |
| chr5.1 | exon | 73691091 | 73691336 | 73691091 | ID=MS.gene062320.t1.exon4;Parent=MS.gene062320.t1 |
| chr5.1 | CDS | 73691091 | 73691336 | 73691091 | ID=cds.MS.gene062320.t1;Parent=MS.gene062320.t1 |
| chr5.1 | exon | 73691858 | 73691950 | 73691858 | ID=MS.gene062320.t1.exon5;Parent=MS.gene062320.t1 |
| chr5.1 | CDS | 73691858 | 73691950 | 73691858 | ID=cds.MS.gene062320.t1;Parent=MS.gene062320.t1 |
| chr5.1 | exon | 73692257 | 73692457 | 73692257 | ID=MS.gene062320.t1.exon6;Parent=MS.gene062320.t1 |
| chr5.1 | CDS | 73692257 | 73692457 | 73692257 | ID=cds.MS.gene062320.t1;Parent=MS.gene062320.t1 |
| chr5.1 | exon | 73693072 | 73693287 | 73693072 | ID=MS.gene062320.t1.exon7;Parent=MS.gene062320.t1 |
| chr5.1 | CDS | 73693072 | 73693287 | 73693072 | ID=cds.MS.gene062320.t1;Parent=MS.gene062320.t1 |
| Gene Sequence |
| Protein sequence |
