Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030088.t1 | XP_003617489.1 | 98.4 | 486 | 8 | 0 | 1 | 486 | 40 | 525 | 5.40E-298 | 1032.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030088.t1 | G7K3H0 | 98.4 | 486 | 8 | 0 | 1 | 486 | 40 | 525 | 3.9e-298 | 1032.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030088 | MS.gene027504 | PPI |
| MS.gene58585 | MS.gene030088 | PPI |
| MS.gene45154 | MS.gene030088 | PPI |
| MS.gene79003 | MS.gene030088 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030088.t1 | MTR_5g092140 | 98.354 | 486 | 8 | 0 | 1 | 486 | 40 | 525 | 0.0 | 1008 |
| MS.gene030088.t1 | MTR_5g036420 | 68.033 | 488 | 152 | 4 | 1 | 486 | 37 | 522 | 0.0 | 718 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030088.t1 | AT4G27020 | 79.218 | 486 | 101 | 0 | 1 | 486 | 38 | 523 | 0.0 | 850 |
| MS.gene030088.t1 | AT5G54870 | 76.543 | 486 | 114 | 0 | 1 | 486 | 46 | 531 | 0.0 | 829 |
| MS.gene030088.t1 | AT5G54870 | 78.066 | 424 | 93 | 0 | 63 | 486 | 2 | 425 | 0.0 | 731 |
| MS.gene030088.t1 | AT1G70160 | 67.006 | 491 | 152 | 4 | 1 | 486 | 38 | 523 | 0.0 | 713 |
Find 145 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCTTATTGTCAGATTAA+AGG | 0.135533 | 5.2:+77916448 | MS.gene030088:CDS |
| AATAAAACTGGTTCCCAATT+TGG | 0.140225 | 5.2:+77912054 | MS.gene030088:CDS |
| TAATCCCATGTTACGCGATA+TGG | 0.192142 | 5.2:-77913089 | None:intergenic |
| TTCCCTTTATTTACCAATAC+TGG | 0.217648 | 5.2:+77913354 | MS.gene030088:CDS |
| CTTTCATTCATGTGGGGATA+TGG | 0.233536 | 5.2:-77916511 | None:intergenic |
| GAAGTCCAATATTGGGTTTA+TGG | 0.251514 | 5.2:+77913386 | MS.gene030088:CDS |
| CATCCAGTATTGGTAAATAA+AGG | 0.257702 | 5.2:-77913357 | None:intergenic |
| TGGTGGTACCCTTCACTTAA+AGG | 0.264669 | 5.2:+77912077 | MS.gene030088:CDS |
| GGGGACCCTTCAAGCACTTT+GGG | 0.284605 | 5.2:+77913326 | MS.gene030088:CDS |
| TTTCTCCATAAACCCAATAT+TGG | 0.285275 | 5.2:-77913391 | None:intergenic |
| GAAGGGTACCACCACCAAAT+TGG | 0.294548 | 5.2:-77912068 | None:intergenic |
| TATCCAAGTGACTGAATTTA+CGG | 0.303482 | 5.2:+77915578 | MS.gene030088:CDS |
| AGACTGCAACTAGCAATTCT+TGG | 0.307722 | 5.2:-77916566 | None:intergenic |
| TTGCATGTGTTATGACAATT+TGG | 0.308786 | 5.2:+77915001 | MS.gene030088:CDS |
| AAGCTTTGGGTTGGGGAGTC+AGG | 0.321621 | 5.2:+77913606 | MS.gene030088:CDS |
| TTTCCTTTAATCTGACAATA+AGG | 0.325650 | 5.2:-77916451 | None:intergenic |
| TTCCACTCAGGGGTGTTGTT+AGG | 0.338330 | 5.2:-77911988 | None:intergenic |
| GATTGGCCATGAAATTTGTT+TGG | 0.340813 | 5.2:-77911905 | None:intergenic |
| CCAACATTCCAGCTTTCATT+AGG | 0.342330 | 5.2:-77913305 | None:intergenic |
| TGGGGTGAGAAGTCCAATAT+TGG | 0.347372 | 5.2:+77913378 | MS.gene030088:CDS |
| ATGGAGTTTCATAATAAAAC+TGG | 0.351954 | 5.2:+77912042 | MS.gene030088:CDS |
| GAAGCAGCAGCAACGAAGAC+AGG | 0.354747 | 5.2:-77911961 | None:intergenic |
| CTAATGAAAGCTGGAATGTT+GGG | 0.355839 | 5.2:+77913306 | MS.gene030088:CDS |
| TGATGCCCAAACAAATTTCA+TGG | 0.360028 | 5.2:+77911899 | None:intergenic |
| CAACTAGCAATTCTTGGTTC+TGG | 0.360207 | 5.2:-77916560 | None:intergenic |
| TTAAACCTGGCACGCATGTC+AGG | 0.360680 | 5.2:-77914352 | None:intergenic |
| AGATTCAGATGGAAAGCTTT+GGG | 0.368974 | 5.2:+77913593 | MS.gene030088:CDS |
| TAGGTCCAGTCATCCTGTTC+TGG | 0.369102 | 5.2:-77915471 | None:intergenic |
| CAGATGGAAAGCTTTGGGTT+GGG | 0.375526 | 5.2:+77913598 | MS.gene030088:CDS |
| GTAAAGGAAGCAGTGCAATA+TGG | 0.382689 | 5.2:-77914327 | None:intergenic |
| ATTCAAGTCGCTTGCCATCT+TGG | 0.383512 | 5.2:+77916401 | MS.gene030088:CDS |
| AGTTCCAAGTCGTTTGTTCA+AGG | 0.388092 | 5.2:-77915067 | None:intergenic |
| CTTGGTTCTGGAGTACTTTG+TGG | 0.390835 | 5.2:-77916548 | None:intergenic |
| TCAACTTCCACTAAAACTTC+AGG | 0.391199 | 5.2:-77915411 | None:intergenic |
| TTGAAACACGTCCTCAGCCT+TGG | 0.392046 | 5.2:+77913430 | MS.gene030088:CDS |
| ATTGGCCATGAAATTTGTTT+GGG | 0.394891 | 5.2:-77911904 | None:intergenic |
| TAAAGGAAGCAGTGCAATAT+GGG | 0.398702 | 5.2:-77914326 | None:intergenic |
| GAGATTCAGATGGAAAGCTT+TGG | 0.406334 | 5.2:+77913592 | MS.gene030088:CDS |
| AATCCCATGTTACGCGATAT+GGG | 0.407296 | 5.2:-77913088 | None:intergenic |
| TGGGTTTATGGAGAAACATA+TGG | 0.408641 | 5.2:+77913398 | MS.gene030088:CDS |
| ATCCAGTATTGGTAAATAAA+GGG | 0.420652 | 5.2:-77913356 | None:intergenic |
| CACATATTTGCAGCATATGC+AGG | 0.424075 | 5.2:-77915036 | None:intergenic |
| AGATGGAAAGCTTTGGGTTG+GGG | 0.425388 | 5.2:+77913599 | MS.gene030088:CDS |
| TCCAACTGAAAATCATGTTA+TGG | 0.433465 | 5.2:-77914429 | None:intergenic |
| TTGGTTCTGGAGTACTTTGT+GGG | 0.433813 | 5.2:-77916547 | None:intergenic |
| TGCTCATAGTTATACATGTA+TGG | 0.434455 | 5.2:+77913046 | MS.gene030088:CDS |
| GGGGTGAGAAGTCCAATATT+GGG | 0.440381 | 5.2:+77913379 | MS.gene030088:CDS |
| TGAAACACGTCCTCAGCCTT+GGG | 0.443806 | 5.2:+77913431 | MS.gene030088:CDS |
| AAGGGTACCACCACCAAATT+GGG | 0.447031 | 5.2:-77912067 | None:intergenic |
| TGGGGACCCTTCAAGCACTT+TGG | 0.453217 | 5.2:+77913325 | MS.gene030088:CDS |
| GAGTACTTTGTGGGAAGAGA+TGG | 0.463548 | 5.2:-77916538 | None:intergenic |
| TTTATTTACCAATACTGGAT+GGG | 0.468152 | 5.2:+77913359 | MS.gene030088:CDS |
| TGATCTCGAGTGTATGCTCC+CGG | 0.474674 | 5.2:-77913124 | None:intergenic |
| TCAGATGGAAAGCTTTGGGT+TGG | 0.479067 | 5.2:+77913597 | MS.gene030088:CDS |
| ACTTGGATAGAACTAGCAAT+TGG | 0.481613 | 5.2:-77915564 | None:intergenic |
| CTTTATTTACCAATACTGGA+TGG | 0.484868 | 5.2:+77913358 | MS.gene030088:CDS |
| CTTCTCACCCCATCCAGTAT+TGG | 0.486334 | 5.2:-77913367 | None:intergenic |
| TACACCCTGACATGCGTGCC+AGG | 0.491150 | 5.2:+77914347 | MS.gene030088:CDS |
| ACTACTGACAATTCCAGAAC+AGG | 0.491280 | 5.2:+77915458 | MS.gene030088:CDS |
| GTCAGGACATGAAAATGAAA+AGG | 0.492218 | 5.2:+77913623 | MS.gene030088:CDS |
| CAACCCCATATCGCGTAACA+TGG | 0.495483 | 5.2:+77913084 | MS.gene030088:CDS |
| CCTAATGAAAGCTGGAATGT+TGG | 0.496987 | 5.2:+77913305 | MS.gene030088:CDS |
| TGGGAACTATCCACCTCCCT+TGG | 0.498783 | 5.2:+77914465 | MS.gene030088:CDS |
| ATCATGTTATGGTAACCATA+TGG | 0.500132 | 5.2:-77914418 | None:intergenic |
| TTACAAGAATCAAGCTTGGA+TGG | 0.500459 | 5.2:+77912023 | MS.gene030088:CDS |
| AGCAAGCACCTTTCCACTCA+GGG | 0.508296 | 5.2:-77911999 | None:intergenic |
| GTGGGAGTATGCACTGAGTA+TGG | 0.512890 | 5.2:+77914387 | MS.gene030088:CDS |
| TACACTCGAGATCAAGGAAT+GGG | 0.516087 | 5.2:+77913133 | MS.gene030088:CDS |
| CGCAGCCGTCTCATTAAACC+TGG | 0.518291 | 5.2:-77914365 | None:intergenic |
| CAAAAGCACCCCAGCGACCT+CGG | 0.519202 | 5.2:-77913512 | None:intergenic |
| AGTTGGATAGACACTTTAAG+TGG | 0.519857 | 5.2:+77914445 | MS.gene030088:CDS |
| TCTTACCACATTAGCATCCA+AGG | 0.520342 | 5.2:-77914482 | None:intergenic |
| TTATTTACCAATACTGGATG+GGG | 0.520537 | 5.2:+77913360 | MS.gene030088:CDS |
| AGTATGGATGGACAACCATA+TGG | 0.522376 | 5.2:+77914403 | MS.gene030088:CDS |
| CTTGAAATGTACAAGGAAGC+AGG | 0.522890 | 5.2:+77915531 | MS.gene030088:CDS |
| TGATGCCGTGGGACGAGTGG+TGG | 0.523194 | 5.2:+77914272 | MS.gene030088:CDS |
| GGAGCATACACTCGAGATCA+AGG | 0.528803 | 5.2:+77913127 | MS.gene030088:CDS |
| CAATTCCAGAACAGGATGAC+TGG | 0.528886 | 5.2:+77915466 | MS.gene030088:CDS |
| AGACCTCCCAAAGTGCTTGA+AGG | 0.531952 | 5.2:-77913332 | None:intergenic |
| GGTTGCATGGTATTGTATCC+AGG | 0.532618 | 5.2:-77916490 | None:intergenic |
| GGGTTTATGGAGAAACATAT+GGG | 0.535348 | 5.2:+77913399 | MS.gene030088:CDS |
| GACCCTTCAAGCACTTTGGG+AGG | 0.536286 | 5.2:+77913329 | MS.gene030088:CDS |
| AAGCAAGCACCTTTCCACTC+AGG | 0.536832 | 5.2:-77912000 | None:intergenic |
| GCACGCATGTCAGGGTGTAA+AGG | 0.536893 | 5.2:-77914343 | None:intergenic |
| CAGCGCTATGGAGGGAGTTG+AGG | 0.537276 | 5.2:-77911927 | None:intergenic |
| ACCTCCCTTGGATGCTAATG+TGG | 0.541358 | 5.2:+77914477 | MS.gene030088:CDS |
| ATGGGCACCTTTCATTCATG+TGG | 0.542100 | 5.2:-77916519 | None:intergenic |
| TCACCGTAAATTCAGTCACT+TGG | 0.546933 | 5.2:-77915581 | None:intergenic |
| CTGAGGACGTGTTTCAAAAG+AGG | 0.547077 | 5.2:-77913424 | None:intergenic |
| CTGCATATGCTGCAAATATG+TGG | 0.547628 | 5.2:+77915037 | MS.gene030088:CDS |
| TAAGCAAACAGCAGTGTGAC+CGG | 0.548192 | 5.2:-77913568 | None:intergenic |
| CTATGGAGGGAGTTGAGGAT+TGG | 0.553620 | 5.2:-77911922 | None:intergenic |
| GGAGAATATCAACAGCGCTA+TGG | 0.554935 | 5.2:-77911939 | None:intergenic |
| TCTCCATCGTTGCACCAAGA+TGG | 0.556464 | 5.2:-77916415 | None:intergenic |
| CTGACAATAAGGAAGCTTCA+CGG | 0.560996 | 5.2:-77916440 | None:intergenic |
| GTTTAATGAGACGGCTGCGT+GGG | 0.561715 | 5.2:+77914369 | MS.gene030088:CDS |
| TGGGTTAGTGGAGCTTATGC+CGG | 0.563154 | 5.2:+77913549 | MS.gene030088:CDS |
| AAGCAGCAGCAACGAAGACA+GGG | 0.563373 | 5.2:-77911960 | None:intergenic |
| GACCTCCCAAAGTGCTTGAA+GGG | 0.565626 | 5.2:-77913331 | None:intergenic |
| TATTTGCAGCATATGCAGGT+TGG | 0.570186 | 5.2:-77915032 | None:intergenic |
| ACATTAGCATCCAAGGGAGG+TGG | 0.570854 | 5.2:-77914475 | None:intergenic |
| AAAACTGGTTCCCAATTTGG+TGG | 0.571897 | 5.2:+77912057 | MS.gene030088:CDS |
| AGTACTTTGTGGGAAGAGAT+GGG | 0.575143 | 5.2:-77916537 | None:intergenic |
| GAATATCAACAGCGCTATGG+AGG | 0.576259 | 5.2:-77911936 | None:intergenic |
| CATATCCCCACATGAATGAA+AGG | 0.581426 | 5.2:+77916512 | MS.gene030088:CDS |
| AAGTATCGAATGGAGTTACC+TGG | 0.581948 | 5.2:+77916472 | MS.gene030088:CDS |
| AGTGTTGATGACATTCACTC+TGG | 0.582494 | 5.2:+77913465 | MS.gene030088:CDS |
| TGGGCACCTTTCATTCATGT+GGG | 0.584734 | 5.2:-77916518 | None:intergenic |
| ACTGGTTCCCAATTTGGTGG+TGG | 0.586912 | 5.2:+77912060 | MS.gene030088:CDS |
| GTTACTTACATACTCGTACT+CGG | 0.588956 | 5.2:-77913165 | None:intergenic |
| TAAACCTGGCACGCATGTCA+GGG | 0.593054 | 5.2:-77914351 | None:intergenic |
| AAGTCCCACCACTCGTCCCA+CGG | 0.596109 | 5.2:-77914277 | None:intergenic |
| ATATAATTGCTATGATGCCG+TGG | 0.598457 | 5.2:+77914260 | MS.gene030088:CDS |
| GCGTGCCAGGTTTAATGAGA+CGG | 0.600559 | 5.2:+77914360 | MS.gene030088:CDS |
| GTTTGCTTAAGAGATTCAGA+TGG | 0.600599 | 5.2:+77913582 | MS.gene030088:CDS |
| CTCGAGATCAAGGAATGGGA+TGG | 0.600876 | 5.2:+77913137 | MS.gene030088:CDS |
| GATCTCGAGTGTATGCTCCC+GGG | 0.602540 | 5.2:-77913123 | None:intergenic |
| AGTCGACTTGCCATCACTGT+AGG | 0.604317 | 5.2:-77915490 | None:intergenic |
| CTTACCACATTAGCATCCAA+GGG | 0.611835 | 5.2:-77914481 | None:intergenic |
| ATATTTGTAACCCAAGGCTG+AGG | 0.612066 | 5.2:-77913441 | None:intergenic |
| TAATGAAAGCTGGAATGTTG+GGG | 0.612292 | 5.2:+77913307 | MS.gene030088:CDS |
| GAGTATGCACTGAGTATGGA+TGG | 0.613805 | 5.2:+77914391 | MS.gene030088:CDS |
| GAAGCCTTGAACAAACGACT+TGG | 0.613901 | 5.2:+77915063 | MS.gene030088:CDS |
| GATTAAAGGAAAGTATCGAA+TGG | 0.614070 | 5.2:+77916462 | MS.gene030088:CDS |
| GTTGGATAGACACTTTAAGT+GGG | 0.622229 | 5.2:+77914446 | MS.gene030088:CDS |
| GATGCCGTGGGACGAGTGGT+GGG | 0.622791 | 5.2:+77914273 | MS.gene030088:CDS |
| ATACACTCGAGATCAAGGAA+TGG | 0.626787 | 5.2:+77913132 | MS.gene030088:CDS |
| TTGCCATCTTGGTGCAACGA+TGG | 0.627684 | 5.2:+77916412 | MS.gene030088:CDS |
| AATATCAACAGCGCTATGGA+GGG | 0.628565 | 5.2:-77911935 | None:intergenic |
| CATGTGGGGATATGGTTGCA+TGG | 0.631354 | 5.2:-77916503 | None:intergenic |
| AACAACACCCCTGAGTGGAA+AGG | 0.631444 | 5.2:+77911991 | MS.gene030088:CDS |
| ATCCCATGTTACGCGATATG+GGG | 0.633851 | 5.2:-77913087 | None:intergenic |
| CTATGATGCCGTGGGACGAG+TGG | 0.634113 | 5.2:+77914269 | MS.gene030088:CDS |
| AACCCCATATCGCGTAACAT+GGG | 0.637001 | 5.2:+77913085 | MS.gene030088:CDS |
| GGTTTAATGAGACGGCTGCG+TGG | 0.647526 | 5.2:+77914368 | MS.gene030088:CDS |
| TATAATTGCTATGATGCCGT+GGG | 0.649188 | 5.2:+77914261 | MS.gene030088:CDS |
| ACACTGATATTTGTAACCCA+AGG | 0.652470 | 5.2:-77913447 | None:intergenic |
| GATGACTGGACCTACAGTGA+TGG | 0.654743 | 5.2:+77915480 | MS.gene030088:CDS |
| GGGCACCTTTCATTCATGTG+GGG | 0.659706 | 5.2:-77916517 | None:intergenic |
| CTCCTAACAACACCCCTGAG+TGG | 0.671911 | 5.2:+77911986 | MS.gene030088:CDS |
| AAAGGAAGCAGTGCAATATG+GGG | 0.678742 | 5.2:-77914325 | None:intergenic |
| CTTCCACTAAAACTTCAGGA+AGG | 0.681458 | 5.2:-77915407 | None:intergenic |
| ACCACATTAGCATCCAAGGG+AGG | 0.689570 | 5.2:-77914478 | None:intergenic |
| GCAAGCACCTTTCCACTCAG+GGG | 0.711817 | 5.2:-77911998 | None:intergenic |
| TTAGTGGAAGTTGAAAAGCG+CGG | 0.757355 | 5.2:+77915420 | MS.gene030088:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTCTGATATTAATTTTTTT+TGG | + | chr5.2:77915143-77915162 | MS.gene030088:intron | 10.0% |
| !! | AAAAAAAAAATCACTACAAA+TGG | - | chr5.2:77914798-77914817 | None:intergenic | 15.0% |
| !! | AATAGATAATAGAAATTCTT+AGG | + | chr5.2:77912682-77912701 | MS.gene030088:intron | 15.0% |
| !! | ATAGATAATAGAAATTCTTA+GGG | + | chr5.2:77912683-77912702 | MS.gene030088:intron | 15.0% |
| !! | ATATTGTTTACTTAAGTTAA+TGG | - | chr5.2:77915351-77915370 | None:intergenic | 15.0% |
| !! | ATCTTATGATTTATATTAGA+AGG | - | chr5.2:77915201-77915220 | None:intergenic | 15.0% |
| !! | ATTTCTCAAATTATATTATG+TGG | - | chr5.2:77912789-77912808 | None:intergenic | 15.0% |
| !! | CACAAAGTAATAAAAAAAAA+AGG | - | chr5.2:77912104-77912123 | None:intergenic | 15.0% |
| !! | TATTGTTTACTTAAGTTAAT+GGG | - | chr5.2:77915350-77915369 | None:intergenic | 15.0% |
| !! | TTAAGATTTAATATTCTGAA+AGG | + | chr5.2:77912588-77912607 | MS.gene030088:intron | 15.0% |
| !!! | AGAATTTTGAATTACAATAT+AGG | + | chr5.2:77914726-77914745 | MS.gene030088:intron | 15.0% |
| !!! | TTTTTTTTTTTTACGAATCT+TGG | + | chr5.2:77914955-77914974 | MS.gene030088:intron | 15.0% |
| !! | ATTACTTTGTGTTAATTTCA+TGG | + | chr5.2:77912113-77912132 | MS.gene030088:intron | 20.0% |
| !! | ATTGTTTACTTAAGTTAATG+GGG | - | chr5.2:77915349-77915368 | None:intergenic | 20.0% |
| !! | TAGATAATAGAAATTCTTAG+GGG | + | chr5.2:77912684-77912703 | MS.gene030088:intron | 20.0% |
| !! | TTATTCAATGAACCTAAAAA+AGG | - | chr5.2:77916145-77916164 | None:intergenic | 20.0% |
| !!! | AAACATACCTTTTTCTTTTA+GGG | + | chr5.2:77913233-77913252 | MS.gene030088:intron | 20.0% |
| !!! | AATTTCAAGATTTTGAAATC+TGG | + | chr5.2:77912258-77912277 | MS.gene030088:intron | 20.0% |
| !!! | ATCAATAATTTTACAATCTG+TGG | + | chr5.2:77914839-77914858 | MS.gene030088:intron | 20.0% |
| !!! | ATTTCAAGATTTTGAAATCT+GGG | + | chr5.2:77912259-77912278 | MS.gene030088:intron | 20.0% |
| !!! | GATCTCATTTTGTTAATTTA+AGG | - | chr5.2:77916054-77916073 | None:intergenic | 20.0% |
| !!! | TAAGAAAAGATTCCTTTTTT+AGG | + | chr5.2:77916130-77916149 | MS.gene030088:intron | 20.0% |
| !!! | TAAGAAAAGATTCCTTTTTT+AGG | - | chr5.2:77916149-77916130 | None:intergenic | 20.0% |
| !!! | TATTGTTCAGATTTTATGTT+AGG | + | chr5.2:77912170-77912189 | MS.gene030088:intron | 20.0% |
| !!! | TTAATTTGCATTTTGTCTAT+TGG | + | chr5.2:77913654-77913673 | MS.gene030088:intron | 20.0% |
| !!! | TTTTATACTTGAAATGTACA+AGG | + | chr5.2:77915524-77915543 | MS.gene030088:CDS | 20.0% |
| ! | AAAAGCTCTTATAGTAGTTT+AGG | + | chr5.2:77915762-77915781 | MS.gene030088:intron | 25.0% |
| ! | AACAAATTGTATATGCTCAA+TGG | - | chr5.2:77915692-77915711 | None:intergenic | 25.0% |
| ! | AACTTTCTGTTTATATGCTT+CGG | - | chr5.2:77912615-77912634 | None:intergenic | 25.0% |
| ! | AATAAGAGATATGTATTGTG+TGG | - | chr5.2:77914918-77914937 | None:intergenic | 25.0% |
| ! | AGAAATGTTTGATTCTTGAA+AGG | - | chr5.2:77913745-77913764 | None:intergenic | 25.0% |
| ! | ATGATTTCACTAAATGAAGA+TGG | - | chr5.2:77915963-77915982 | None:intergenic | 25.0% |
| ! | ATGGAGTTTCATAATAAAAC+TGG | + | chr5.2:77912042-77912061 | MS.gene030088:CDS | 25.0% |
| ! | GAACAATTCATATTATTGCT+AGG | - | chr5.2:77914608-77914627 | None:intergenic | 25.0% |
| ! | GATTTATATTAGAAGGTTGA+AGG | - | chr5.2:77915194-77915213 | None:intergenic | 25.0% |
| ! | TAAAAATAATATACTCCCTC+CGG | - | chr5.2:77916251-77916270 | None:intergenic | 25.0% |
| ! | TAAACTTATGAAATCTCCAT+AGG | - | chr5.2:77914139-77914158 | None:intergenic | 25.0% |
| ! | TATAATCTAGATTTCTTTCG+TGG | + | chr5.2:77913885-77913904 | MS.gene030088:intron | 25.0% |
| ! | TTTATTTACCAATACTGGAT+GGG | + | chr5.2:77913359-77913378 | MS.gene030088:CDS | 25.0% |
| ! | TTTCCTTTAATCTGACAATA+AGG | - | chr5.2:77916454-77916473 | None:intergenic | 25.0% |
| !! | AACATAATTTTCTGAGTGTT+AGG | + | chr5.2:77912720-77912739 | MS.gene030088:intron | 25.0% |
| !! | GAAACATACCTTTTTCTTTT+AGG | + | chr5.2:77913232-77913251 | MS.gene030088:intron | 25.0% |
| !!! | AACTTGTTTACAGTTGTTTT+GGG | + | chr5.2:77912553-77912572 | MS.gene030088:intron | 25.0% |
| !!! | AATTTCATGGTTTTGAAATC+TGG | + | chr5.2:77912126-77912145 | MS.gene030088:intron | 25.0% |
| !!! | ATCCAGTATTGGTAAATAAA+GGG | - | chr5.2:77913359-77913378 | None:intergenic | 25.0% |
| !!! | ATGGTTTATTGATTCTCATT+TGG | - | chr5.2:77914630-77914649 | None:intergenic | 25.0% |
| !!! | TCTTTTCTTATATTTGAGAC+CGG | + | chr5.2:77916229-77916248 | MS.gene030088:intron | 25.0% |
| !!! | TCTTTTCTTATATTTGAGAC+CGG | - | chr5.2:77916248-77916229 | None:intergenic | 25.0% |
| !!! | TTTTGAGACTCTAGAAAAAT+GGG | + | chr5.2:77913530-77913549 | MS.gene030088:CDS | 25.0% |
| AAAAAAGGACCTTTAAGTGA+AGG | - | chr5.2:77912089-77912108 | None:intergenic | 30.0% | |
| AAAAAGGACCTTTAAGTGAA+GGG | - | chr5.2:77912088-77912107 | None:intergenic | 30.0% | |
| AAACATAGAAACCAGAATCT+AGG | - | chr5.2:77915613-77915632 | None:intergenic | 30.0% | |
| ACTTTCTGTTTATATGCTTC+GGG | - | chr5.2:77912614-77912633 | None:intergenic | 30.0% | |
| ATCATGTTATGGTAACCATA+TGG | - | chr5.2:77914421-77914440 | None:intergenic | 30.0% | |
| ATTCTTGTGTTTAACAACCT+TGG | + | chr5.2:77914164-77914183 | MS.gene030088:intron | 30.0% | |
| CAAGTTCACTCTACATTTAA+GGG | + | chr5.2:77912871-77912890 | MS.gene030088:intron | 30.0% | |
| CCAAATATCAATGTTTACAG+AGG | - | chr5.2:77912971-77912990 | None:intergenic | 30.0% | |
| CCTCTGTAAACATTGATATT+TGG | + | chr5.2:77912968-77912987 | MS.gene030088:intron | 30.0% | |
| CTACTCAATGAACCTAAAAA+AGG | + | chr5.2:77916204-77916223 | MS.gene030088:intron | 30.0% | |
| CTTCCTTATTGTCAGATTAA+AGG | + | chr5.2:77916448-77916467 | MS.gene030088:CDS | 30.0% | |
| GTTCCTATTAATTTAGTGCA+GGG | - | chr5.2:77915670-77915689 | None:intergenic | 30.0% | |
| TAAAGGTGGAAACAAACTAT+TGG | - | chr5.2:77915986-77916005 | None:intergenic | 30.0% | |
| TAAGGATCCCTAAAAGAAAA+AGG | - | chr5.2:77913243-77913262 | None:intergenic | 30.0% | |
| TATCCAAGTGACTGAATTTA+CGG | + | chr5.2:77915578-77915597 | MS.gene030088:CDS | 30.0% | |
| TATTGCTAGGACTTAAGAAA+GGG | - | chr5.2:77914595-77914614 | None:intergenic | 30.0% | |
| TCAAGTTCACTCTACATTTA+AGG | + | chr5.2:77912870-77912889 | MS.gene030088:intron | 30.0% | |
| TCCAACTGAAAATCATGTTA+TGG | - | chr5.2:77914432-77914451 | None:intergenic | 30.0% | |
| TGCTCATAGTTATACATGTA+TGG | + | chr5.2:77913046-77913065 | MS.gene030088:CDS | 30.0% | |
| TTATCTATTTGCTCTGATCT+AGG | + | chr5.2:77913016-77913035 | MS.gene030088:intron | 30.0% | |
| TTATTGCTAGGACTTAAGAA+AGG | - | chr5.2:77914596-77914615 | None:intergenic | 30.0% | |
| TTATTTACCAATACTGGATG+GGG | + | chr5.2:77913360-77913379 | MS.gene030088:CDS | 30.0% | |
| TTGCATGTGTTATGACAATT+TGG | + | chr5.2:77915001-77915020 | MS.gene030088:CDS | 30.0% | |
| TTTCTCCATAAACCCAATAT+TGG | - | chr5.2:77913394-77913413 | None:intergenic | 30.0% | |
| ! | AATAAAACTGGTTCCCAATT+TGG | + | chr5.2:77912054-77912073 | MS.gene030088:CDS | 30.0% |
| ! | ACCATAACATGATTTTCAGT+TGG | + | chr5.2:77914428-77914447 | MS.gene030088:CDS | 30.0% |
| ! | ATTGGCCATGAAATTTGTTT+GGG | - | chr5.2:77911907-77911926 | None:intergenic | 30.0% |
| ! | CAACTAAAATACGTGTTTTC+AGG | + | chr5.2:77915836-77915855 | MS.gene030088:intron | 30.0% |
| ! | CTTTATTTACCAATACTGGA+TGG | + | chr5.2:77913358-77913377 | MS.gene030088:CDS | 30.0% |
| ! | TATTAGAAGGTTGAAGGTAT+TGG | - | chr5.2:77915188-77915207 | None:intergenic | 30.0% |
| ! | TCAATTTTCCTAATGAAAGC+TGG | + | chr5.2:77913297-77913316 | MS.gene030088:CDS | 30.0% |
| ! | TTCCCTTTATTTACCAATAC+TGG | + | chr5.2:77913354-77913373 | MS.gene030088:CDS | 30.0% |
| ! | TTTGAGTTATTGGTGGTAAA+TGG | + | chr5.2:77913933-77913952 | MS.gene030088:intron | 30.0% |
| ! | TTTGTAGAATTTTCTTGACC+AGG | + | chr5.2:77916307-77916326 | MS.gene030088:intron | 30.0% |
| ! | TTTTCACCTGATTGCAAAAA+GGG | - | chr5.2:77913266-77913285 | None:intergenic | 30.0% |
| ! | TTTTTCACCTGATTGCAAAA+AGG | - | chr5.2:77913267-77913286 | None:intergenic | 30.0% |
| !! | ATCACTACAAATGGTCTTAT+TGG | - | chr5.2:77914789-77914808 | None:intergenic | 30.0% |
| !! | CATCCAGTATTGGTAAATAA+AGG | - | chr5.2:77913360-77913379 | None:intergenic | 30.0% |
| !! | GAACTTGTTTACAGTTGTTT+TGG | + | chr5.2:77912552-77912571 | MS.gene030088:intron | 30.0% |
| !! | GATTAAAGGAAAGTATCGAA+TGG | + | chr5.2:77916462-77916481 | MS.gene030088:CDS | 30.0% |
| !! | GCATATACAATTTGTTACCT+TGG | + | chr5.2:77915696-77915715 | MS.gene030088:intron | 30.0% |
| !! | TCACTACAAATGGTCTTATT+GGG | - | chr5.2:77914788-77914807 | None:intergenic | 30.0% |
| !! | TTTCATTACTGTGTTGTTTG+AGG | + | chr5.2:77915798-77915817 | MS.gene030088:intron | 30.0% |
| !!! | AACCACTTTTTGACAACTTT+TGG | + | chr5.2:77912820-77912839 | MS.gene030088:intron | 30.0% |
| !!! | CTTTTGAGACTCTAGAAAAA+TGG | + | chr5.2:77913529-77913548 | MS.gene030088:CDS | 30.0% |
| !!! | GAAAACACGTATTTTAGTTG+AGG | - | chr5.2:77915836-77915855 | None:intergenic | 30.0% |
| AAATCACGAGTTCAAGACTA+TGG | - | chr5.2:77914649-77914668 | None:intergenic | 35.0% | |
| AATGACACACACACAGATAT+TGG | - | chr5.2:77915126-77915145 | None:intergenic | 35.0% | |
| ACACTGATATTTGTAACCCA+AGG | - | chr5.2:77913450-77913469 | None:intergenic | 35.0% | |
| ACTAGCAATCTATCAGTACT+GGG | + | chr5.2:77915246-77915265 | MS.gene030088:intron | 35.0% | |
| ACTTGGATAGAACTAGCAAT+TGG | - | chr5.2:77915567-77915586 | None:intergenic | 35.0% | |
| AGATTCAGATGGAAAGCTTT+GGG | + | chr5.2:77913593-77913612 | MS.gene030088:CDS | 35.0% | |
| AGTTGGATAGACACTTTAAG+TGG | + | chr5.2:77914445-77914464 | MS.gene030088:CDS | 35.0% | |
| ATAAGCTTTCTACGCAAGTT+TGG | + | chr5.2:77914683-77914702 | MS.gene030088:intron | 35.0% | |
| ATAGAAATTCTTAGGGGAGT+TGG | + | chr5.2:77912690-77912709 | MS.gene030088:intron | 35.0% | |
| ATATAATTGCTATGATGCCG+TGG | + | chr5.2:77914260-77914279 | MS.gene030088:CDS | 35.0% | |
| ATCAATGTTTACAGAGGAGA+GGG | - | chr5.2:77912965-77912984 | None:intergenic | 35.0% | |
| CAACACAGTAATGAAACTTC+TGG | - | chr5.2:77915794-77915813 | None:intergenic | 35.0% | |
| CAGAAAGAAGAAACACAGAA+AGG | - | chr5.2:77915376-77915395 | None:intergenic | 35.0% | |
| CTAATGAAAGCTGGAATGTT+GGG | + | chr5.2:77913306-77913325 | MS.gene030088:CDS | 35.0% | |
| GAAGTCCAATATTGGGTTTA+TGG | + | chr5.2:77913386-77913405 | MS.gene030088:CDS | 35.0% | |
| GACACAGAAACTAAACTCAA+AGG | - | chr5.2:77912236-77912255 | None:intergenic | 35.0% | |
| GATGATGTAGTGAAGAGAAA+TGG | - | chr5.2:77913190-77913209 | None:intergenic | 35.0% | |
| GCATATGTCCTACTTCATAA+AGG | - | chr5.2:77916003-77916022 | None:intergenic | 35.0% | |
| GGGTTTATGGAGAAACATAT+GGG | + | chr5.2:77913399-77913418 | MS.gene030088:CDS | 35.0% | |
| GGTTCCTATTAATTTAGTGC+AGG | - | chr5.2:77915671-77915690 | None:intergenic | 35.0% | |
| GTCAGGACATGAAAATGAAA+AGG | + | chr5.2:77913623-77913642 | MS.gene030088:CDS | 35.0% | |
| GTCCAAAAGTTGTCAAAAAG+TGG | - | chr5.2:77912825-77912844 | None:intergenic | 35.0% | |
| GTTACTTACATACTCGTACT+CGG | - | chr5.2:77913168-77913187 | None:intergenic | 35.0% | |
| GTTGGATAGACACTTTAAGT+GGG | + | chr5.2:77914446-77914465 | MS.gene030088:CDS | 35.0% | |
| GTTTGCTTAAGAGATTCAGA+TGG | + | chr5.2:77913582-77913601 | MS.gene030088:CDS | 35.0% | |
| TAAAGGAAGCAGTGCAATAT+GGG | - | chr5.2:77914329-77914348 | None:intergenic | 35.0% | |
| TAATGAAAGCTGGAATGTTG+GGG | + | chr5.2:77913307-77913326 | MS.gene030088:CDS | 35.0% | |
| TACAAACAAAAGAGAGAGGA+AGG | - | chr5.2:77914232-77914251 | None:intergenic | 35.0% | |
| TATAATTGCTATGATGCCGT+GGG | + | chr5.2:77914261-77914280 | MS.gene030088:CDS | 35.0% | |
| TATCAATGTTTACAGAGGAG+AGG | - | chr5.2:77912966-77912985 | None:intergenic | 35.0% | |
| TATGTCCTACTTCATAAAGG+TGG | - | chr5.2:77916000-77916019 | None:intergenic | 35.0% | |
| TCAACTTCCACTAAAACTTC+AGG | - | chr5.2:77915414-77915433 | None:intergenic | 35.0% | |
| TCACCCTGCACTAAATTAAT+AGG | + | chr5.2:77915664-77915683 | MS.gene030088:intron | 35.0% | |
| TCGTGGCATATAATTCATCA+TGG | + | chr5.2:77913902-77913921 | MS.gene030088:intron | 35.0% | |
| TGCAATCAGGTGAAAAATCA+CGG | + | chr5.2:77913270-77913289 | MS.gene030088:intron | 35.0% | |
| TGGGTTTATGGAGAAACATA+TGG | + | chr5.2:77913398-77913417 | MS.gene030088:CDS | 35.0% | |
| TGTTTCCACCTTTATGAAGT+AGG | + | chr5.2:77915992-77916011 | MS.gene030088:intron | 35.0% | |
| TTACAAGAATCAAGCTTGGA+TGG | + | chr5.2:77912023-77912042 | MS.gene030088:CDS | 35.0% | |
| TTCACTAAATGAAGATGGTG+TGG | - | chr5.2:77915958-77915977 | None:intergenic | 35.0% | |
| TTGGATTCAAAGAGACTGAT+TGG | + | chr5.2:77912987-77913006 | MS.gene030088:intron | 35.0% | |
| TTTCTTGACCAGGTTCTTAT+GGG | + | chr5.2:77916317-77916336 | MS.gene030088:intron | 35.0% | |
| ! | AAACTTGTTTCCTGCTGTTA+TGG | + | chr5.2:77912397-77912416 | MS.gene030088:intron | 35.0% |
| ! | CACTCACAAGAGTATACTTA+GGG | - | chr5.2:77914105-77914124 | None:intergenic | 35.0% |
| ! | GATTGGCCATGAAATTTGTT+TGG | - | chr5.2:77911908-77911927 | None:intergenic | 35.0% |
| ! | GCTTTTACAAGAATCAAGCT+TGG | + | chr5.2:77912019-77912038 | MS.gene030088:CDS | 35.0% |
| ! | GGATTATTATTTTCTGTCCC+GGG | + | chr5.2:77913106-77913125 | MS.gene030088:CDS | 35.0% |
| ! | GGGATTATTATTTTCTGTCC+CGG | + | chr5.2:77913105-77913124 | MS.gene030088:CDS | 35.0% |
| ! | TTCTTATATTTGAGACCGGA+GGG | + | chr5.2:77916233-77916252 | MS.gene030088:intron | 35.0% |
| ! | TTCTTATATTTGAGACCGGA+GGG | - | chr5.2:77916252-77916233 | None:intergenic | 35.0% |
| ! | TTGTGCAGTTTTACAACTCT+CGG | + | chr5.2:77914005-77914024 | MS.gene030088:intron | 35.0% |
| ! | TTTCTTATATTTGAGACCGG+AGG | + | chr5.2:77916232-77916251 | MS.gene030088:intron | 35.0% |
| ! | TTTCTTATATTTGAGACCGG+AGG | - | chr5.2:77916251-77916232 | None:intergenic | 35.0% |
| ! | TTTTCTTGACCAGGTTCTTA+TGG | + | chr5.2:77916316-77916335 | MS.gene030088:intron | 35.0% |
| !! | ACTCTAGAAAAATGGGTTAG+TGG | + | chr5.2:77913537-77913556 | MS.gene030088:CDS | 35.0% |
| !! | GGACTTGTTGTATTGAACTT+TGG | + | chr5.2:77912191-77912210 | MS.gene030088:intron | 35.0% |
| !! | GGTTGTTGACTTTGAGTTAT+TGG | + | chr5.2:77913923-77913942 | MS.gene030088:intron | 35.0% |
| !! | TCCTCTCTCTTTTGTTTGTA+GGG | + | chr5.2:77914232-77914251 | MS.gene030088:intron | 35.0% |
| !! | TGTTGACTTTGAGTTATTGG+TGG | + | chr5.2:77913926-77913945 | MS.gene030088:intron | 35.0% |
| !! | TTCCTCTCTCTTTTGTTTGT+AGG | + | chr5.2:77914231-77914250 | MS.gene030088:intron | 35.0% |
| AAAACAAGCCCATAAGAACC+TGG | - | chr5.2:77916328-77916347 | None:intergenic | 40.0% | |
| AAAGGAAGCAGTGCAATATG+GGG | - | chr5.2:77914328-77914347 | None:intergenic | 40.0% | |
| AATATCAACAGCGCTATGGA+GGG | - | chr5.2:77911938-77911957 | None:intergenic | 40.0% | |
| AATCCCATGTTACGCGATAT+GGG | - | chr5.2:77913091-77913110 | None:intergenic | 40.0% | |
| AATCTTGTCAGCATCAGAGT+AGG | + | chr5.2:77913815-77913834 | MS.gene030088:intron | 40.0% | |
| ACCTGATTGCAAAAAGGGTA+AGG | - | chr5.2:77913261-77913280 | None:intergenic | 40.0% | |
| ACTACTGACAATTCCAGAAC+AGG | + | chr5.2:77915458-77915477 | MS.gene030088:CDS | 40.0% | |
| AGTACTTTGTGGGAAGAGAT+GGG | - | chr5.2:77916540-77916559 | None:intergenic | 40.0% | |
| AGTATGGATGGACAACCATA+TGG | + | chr5.2:77914403-77914422 | MS.gene030088:CDS | 40.0% | |
| AGTTCCAAGTCGTTTGTTCA+AGG | - | chr5.2:77915070-77915089 | None:intergenic | 40.0% | |
| ATACACTCGAGATCAAGGAA+TGG | + | chr5.2:77913132-77913151 | MS.gene030088:CDS | 40.0% | |
| ATATTTGTAACCCAAGGCTG+AGG | - | chr5.2:77913444-77913463 | None:intergenic | 40.0% | |
| ATGGTAATTTCTGAACTCCG+TGG | + | chr5.2:77913957-77913976 | MS.gene030088:intron | 40.0% | |
| CAAGAGAAAATGTACAGCCA+AGG | - | chr5.2:77915716-77915735 | None:intergenic | 40.0% | |
| CACATATTTGCAGCATATGC+AGG | - | chr5.2:77915039-77915058 | None:intergenic | 40.0% | |
| CATATCCCCACATGAATGAA+AGG | + | chr5.2:77916512-77916531 | MS.gene030088:CDS | 40.0% | |
| CCAACATTCCAGCTTTCATT+AGG | - | chr5.2:77913308-77913327 | None:intergenic | 40.0% | |
| CCTAATGAAAGCTGGAATGT+TGG | + | chr5.2:77913305-77913324 | MS.gene030088:CDS | 40.0% | |
| CTCTGATGCTGACAAGATTA+AGG | - | chr5.2:77913814-77913833 | None:intergenic | 40.0% | |
| CTGACAATAAGGAAGCTTCA+CGG | - | chr5.2:77916443-77916462 | None:intergenic | 40.0% | |
| CTGCACAAATGAGTTAACTC+AGG | - | chr5.2:77913993-77914012 | None:intergenic | 40.0% | |
| CTGCATATGCTGCAAATATG+TGG | + | chr5.2:77915037-77915056 | MS.gene030088:CDS | 40.0% | |
| CTGTGTTTCTTCTTTCTGCA+GGG | + | chr5.2:77915378-77915397 | MS.gene030088:intron | 40.0% | |
| CTTACCACATTAGCATCCAA+GGG | - | chr5.2:77914484-77914503 | None:intergenic | 40.0% | |
| CTTCCACTAAAACTTCAGGA+AGG | - | chr5.2:77915410-77915429 | None:intergenic | 40.0% | |
| CTTGAAATGTACAAGGAAGC+AGG | + | chr5.2:77915531-77915550 | MS.gene030088:CDS | 40.0% | |
| CTTTCATTCATGTGGGGATA+TGG | - | chr5.2:77916514-77916533 | None:intergenic | 40.0% | |
| GACTAGCAATCTATCAGTAC+TGG | + | chr5.2:77915245-77915264 | MS.gene030088:intron | 40.0% | |
| GAGATTCAGATGGAAAGCTT+TGG | + | chr5.2:77913592-77913611 | MS.gene030088:CDS | 40.0% | |
| GATGCTGTCCATTACTAAGT+CGG | + | chr5.2:77915905-77915924 | MS.gene030088:intron | 40.0% | |
| GCAATCAGGTGAAAAATCAC+GGG | + | chr5.2:77913271-77913290 | MS.gene030088:intron | 40.0% | |
| GTAAAGGAAGCAGTGCAATA+TGG | - | chr5.2:77914330-77914349 | None:intergenic | 40.0% | |
| TAATCCCATGTTACGCGATA+TGG | - | chr5.2:77913092-77913111 | None:intergenic | 40.0% | |
| TACACTCGAGATCAAGGAAT+GGG | + | chr5.2:77913133-77913152 | MS.gene030088:CDS | 40.0% | |
| TATTTGCAGCATATGCAGGT+TGG | - | chr5.2:77915035-77915054 | None:intergenic | 40.0% | |
| TCACCGTAAATTCAGTCACT+TGG | - | chr5.2:77915584-77915603 | None:intergenic | 40.0% | |
| TCCCTACAAACAAAAGAGAG+AGG | - | chr5.2:77914236-77914255 | None:intergenic | 40.0% | |
| TCTGTGTTTCTTCTTTCTGC+AGG | + | chr5.2:77915377-77915396 | MS.gene030088:intron | 40.0% | |
| TCTTACCACATTAGCATCCA+AGG | - | chr5.2:77914485-77914504 | None:intergenic | 40.0% | |
| TGTGTTTCTTCTTTCTGCAG+GGG | + | chr5.2:77915379-77915398 | MS.gene030088:intron | 40.0% | |
| TTAAGCTTCATGCTTTGCAG+AGG | - | chr5.2:77912448-77912467 | None:intergenic | 40.0% | |
| TTAGTGGAAGTTGAAAAGCG+CGG | + | chr5.2:77915420-77915439 | MS.gene030088:CDS | 40.0% | |
| ! | AAAACTGGTTCCCAATTTGG+TGG | + | chr5.2:77912057-77912076 | MS.gene030088:CDS | 40.0% |
| ! | ACTCAGGAGTTTGATAACCA+CGG | - | chr5.2:77913977-77913996 | None:intergenic | 40.0% |
| ! | GCACTCACAAGAGTATACTT+AGG | - | chr5.2:77914106-77914125 | None:intergenic | 40.0% |
| ! | GTTATTGGTGGTAAATGGCA+TGG | + | chr5.2:77913938-77913957 | MS.gene030088:intron | 40.0% |
| ! | TCCTTACCCTTTTTGCAATC+AGG | + | chr5.2:77913257-77913276 | MS.gene030088:intron | 40.0% |
| !! | AAGTATCGAATGGAGTTACC+TGG | + | chr5.2:77916472-77916491 | MS.gene030088:CDS | 40.0% |
| !! | AGTGTTGATGACATTCACTC+TGG | + | chr5.2:77913465-77913484 | MS.gene030088:CDS | 40.0% |
| !! | CTACAAATGGTCTTATTGGG+TGG | - | chr5.2:77914785-77914804 | None:intergenic | 40.0% |
| !! | CTTGCTGTTTCAAAAATCCG+AGG | + | chr5.2:77913495-77913514 | MS.gene030088:CDS | 40.0% |
| !! | TGACCTTCCTGAAGTTTTAG+TGG | + | chr5.2:77915404-77915423 | MS.gene030088:CDS | 40.0% |
| !! | TTGGTTCTGGAGTACTTTGT+GGG | - | chr5.2:77916550-77916569 | None:intergenic | 40.0% |
| !!! | CATTTACTCTGCTGCTTTTC+AGG | + | chr5.2:77914978-77914997 | MS.gene030088:intron | 40.0% |
| !!! | CTCGGATTTTTGAAACAGCA+AGG | - | chr5.2:77913497-77913516 | None:intergenic | 40.0% |
| AACCCCATATCGCGTAACAT+GGG | + | chr5.2:77913085-77913104 | MS.gene030088:CDS | 45.0% | |
| ATCCCATGTTACGCGATATG+GGG | - | chr5.2:77913090-77913109 | None:intergenic | 45.0% | |
| ATGGGCACCTTTCATTCATG+TGG | - | chr5.2:77916522-77916541 | None:intergenic | 45.0% | |
| ATTCAAGTCGCTTGCCATCT+TGG | + | chr5.2:77916401-77916420 | MS.gene030088:CDS | 45.0% | |
| CAATTCCAATCTACTCCCTC+CGG | + | chr5.2:77916098-77916117 | MS.gene030088:intron | 45.0% | |
| CAATTCCAGAACAGGATGAC+TGG | + | chr5.2:77915466-77915485 | MS.gene030088:CDS | 45.0% | |
| CTGAGGACGTGTTTCAAAAG+AGG | - | chr5.2:77913427-77913446 | None:intergenic | 45.0% | |
| GAAGCCTTGAACAAACGACT+TGG | + | chr5.2:77915063-77915082 | MS.gene030088:CDS | 45.0% | |
| GAATATCAACAGCGCTATGG+AGG | - | chr5.2:77911939-77911958 | None:intergenic | 45.0% | |
| GAGATCAGATCGTTTGAGCA+TGG | + | chr5.2:77916068-77916087 | MS.gene030088:intron | 45.0% | |
| GAGTACTTTGTGGGAAGAGA+TGG | - | chr5.2:77916541-77916560 | None:intergenic | 45.0% | |
| GAGTATGCACTGAGTATGGA+TGG | + | chr5.2:77914391-77914410 | MS.gene030088:CDS | 45.0% | |
| GGAGAATATCAACAGCGCTA+TGG | - | chr5.2:77911942-77911961 | None:intergenic | 45.0% | |
| GGGGTGAGAAGTCCAATATT+GGG | + | chr5.2:77913379-77913398 | MS.gene030088:CDS | 45.0% | |
| GGTGAGTTTGTCCTAGATTC+TGG | + | chr5.2:77915599-77915618 | MS.gene030088:intron | 45.0% | |
| GGTTGCATGGTATTGTATCC+AGG | - | chr5.2:77916493-77916512 | None:intergenic | 45.0% | |
| TAAGCAAACAGCAGTGTGAC+CGG | - | chr5.2:77913571-77913590 | None:intergenic | 45.0% | |
| TATGCTGCAGAGTTTCACCA+AGG | - | chr5.2:77914184-77914203 | None:intergenic | 45.0% | |
| TCTTTCAGAGCCATAACAGC+AGG | - | chr5.2:77912410-77912429 | None:intergenic | 45.0% | |
| TGGGCACCTTTCATTCATGT+GGG | - | chr5.2:77916521-77916540 | None:intergenic | 45.0% | |
| TGGGGTGAGAAGTCCAATAT+TGG | + | chr5.2:77913378-77913397 | MS.gene030088:CDS | 45.0% | |
| TGGTGGTACCCTTCACTTAA+AGG | + | chr5.2:77912077-77912096 | MS.gene030088:CDS | 45.0% | |
| TTCAAAAATCCGAGGTCGCT+GGG | + | chr5.2:77913503-77913522 | MS.gene030088:CDS | 45.0% | |
| TTGGAGCACGAGACAAGTAA+AGG | - | chr5.2:77915107-77915126 | None:intergenic | 45.0% | |
| TTTCAAAAATCCGAGGTCGC+TGG | + | chr5.2:77913502-77913521 | MS.gene030088:CDS | 45.0% | |
| ! | AACTGGCTCCGACTTAGTAA+TGG | - | chr5.2:77915916-77915935 | None:intergenic | 45.0% |
| !! | AAGGGTACCACCACCAAATT+GGG | - | chr5.2:77912070-77912089 | None:intergenic | 45.0% |
| !! | AGATGGAAAGCTTTGGGTTG+GGG | + | chr5.2:77913599-77913618 | MS.gene030088:CDS | 45.0% |
| !! | CAGATGGAAAGCTTTGGGTT+GGG | + | chr5.2:77913598-77913617 | MS.gene030088:CDS | 45.0% |
| !! | CTTGGTTCTGGAGTACTTTG+TGG | - | chr5.2:77916551-77916570 | None:intergenic | 45.0% |
| !! | TCAGATGGAAAGCTTTGGGT+TGG | + | chr5.2:77913597-77913616 | MS.gene030088:CDS | 45.0% |
| !!! | TTATAAACATAAATTTTTAT+CGG | - | chr5.2:77913773-77913792 | None:intergenic | 5.0% |
| AACAACACCCCTGAGTGGAA+AGG | + | chr5.2:77911991-77912010 | MS.gene030088:CDS | 50.0% | |
| AAGCAAGCACCTTTCCACTC+AGG | - | chr5.2:77912003-77912022 | None:intergenic | 50.0% | |
| AAGCAGCAGCAACGAAGACA+GGG | - | chr5.2:77911963-77911982 | None:intergenic | 50.0% | |
| ACATTAGCATCCAAGGGAGG+TGG | - | chr5.2:77914478-77914497 | None:intergenic | 50.0% | |
| ACCACATTAGCATCCAAGGG+AGG | - | chr5.2:77914481-77914500 | None:intergenic | 50.0% | |
| ACCTCCCTTGGATGCTAATG+TGG | + | chr5.2:77914477-77914496 | MS.gene030088:CDS | 50.0% | |
| AGCAAGCACCTTTCCACTCA+GGG | - | chr5.2:77912002-77912021 | None:intergenic | 50.0% | |
| CAACCCCATATCGCGTAACA+TGG | + | chr5.2:77913084-77913103 | MS.gene030088:CDS | 50.0% | |
| CATGTGGGGATATGGTTGCA+TGG | - | chr5.2:77916506-77916525 | None:intergenic | 50.0% | |
| CTATGGAGGGAGTTGAGGAT+TGG | - | chr5.2:77911925-77911944 | None:intergenic | 50.0% | |
| CTCGAGATCAAGGAATGGGA+TGG | + | chr5.2:77913137-77913156 | MS.gene030088:CDS | 50.0% | |
| CTTCTCACCCCATCCAGTAT+TGG | - | chr5.2:77913370-77913389 | None:intergenic | 50.0% | |
| GAGTGCATGAGTAGAGCCTA+TGG | + | chr5.2:77914120-77914139 | MS.gene030088:intron | 50.0% | |
| GATGACTGGACCTACAGTGA+TGG | + | chr5.2:77915480-77915499 | MS.gene030088:CDS | 50.0% | |
| GCGTGCCAGGTTTAATGAGA+CGG | + | chr5.2:77914360-77914379 | MS.gene030088:CDS | 50.0% | |
| GGAGCATACACTCGAGATCA+AGG | + | chr5.2:77913127-77913146 | MS.gene030088:CDS | 50.0% | |
| GGGCACCTTTCATTCATGTG+GGG | - | chr5.2:77916520-77916539 | None:intergenic | 50.0% | |
| GTTTAATGAGACGGCTGCGT+GGG | + | chr5.2:77914369-77914388 | MS.gene030088:CDS | 50.0% | |
| TAAACCTGGCACGCATGTCA+GGG | - | chr5.2:77914354-77914373 | None:intergenic | 50.0% | |
| TAGGTCCAGTCATCCTGTTC+TGG | - | chr5.2:77915474-77915493 | None:intergenic | 50.0% | |
| TCAAAAATCCGAGGTCGCTG+GGG | + | chr5.2:77913504-77913523 | MS.gene030088:CDS | 50.0% | |
| TCTCCATCGTTGCACCAAGA+TGG | - | chr5.2:77916418-77916437 | None:intergenic | 50.0% | |
| TGAAACACGTCCTCAGCCTT+GGG | + | chr5.2:77913431-77913450 | MS.gene030088:CDS | 50.0% | |
| TGATCTCGAGTGTATGCTCC+CGG | - | chr5.2:77913127-77913146 | None:intergenic | 50.0% | |
| TTAAACCTGGCACGCATGTC+AGG | - | chr5.2:77914355-77914374 | None:intergenic | 50.0% | |
| TTGAAACACGTCCTCAGCCT+TGG | + | chr5.2:77913430-77913449 | MS.gene030088:CDS | 50.0% | |
| ! | ACTGGTTCCCAATTTGGTGG+TGG | + | chr5.2:77912060-77912079 | MS.gene030088:CDS | 50.0% |
| ! | AGACCTCCCAAAGTGCTTGA+AGG | - | chr5.2:77913335-77913354 | None:intergenic | 50.0% |
| ! | GACCTCCCAAAGTGCTTGAA+GGG | - | chr5.2:77913334-77913353 | None:intergenic | 50.0% |
| ! | GTGGGAGTATGCACTGAGTA+TGG | + | chr5.2:77914387-77914406 | MS.gene030088:CDS | 50.0% |
| ! | TTGCCATCTTGGTGCAACGA+TGG | + | chr5.2:77916412-77916431 | MS.gene030088:CDS | 50.0% |
| !! | AGTCGACTTGCCATCACTGT+AGG | - | chr5.2:77915493-77915512 | None:intergenic | 50.0% |
| !! | GAAGGGTACCACCACCAAAT+TGG | - | chr5.2:77912071-77912090 | None:intergenic | 50.0% |
| !! | TGGGTTAGTGGAGCTTATGC+CGG | + | chr5.2:77913549-77913568 | MS.gene030088:CDS | 50.0% |
| !! | TTCCACTCAGGGGTGTTGTT+AGG | - | chr5.2:77911991-77912010 | None:intergenic | 50.0% |
| CGCAGCCGTCTCATTAAACC+TGG | - | chr5.2:77914368-77914387 | None:intergenic | 55.0% | |
| CTCCTAACAACACCCCTGAG+TGG | + | chr5.2:77911986-77912005 | MS.gene030088:CDS | 55.0% | |
| GAAGCAGCAGCAACGAAGAC+AGG | - | chr5.2:77911964-77911983 | None:intergenic | 55.0% | |
| GACCCTTCAAGCACTTTGGG+AGG | + | chr5.2:77913329-77913348 | MS.gene030088:CDS | 55.0% | |
| GATCTCGAGTGTATGCTCCC+GGG | - | chr5.2:77913126-77913145 | None:intergenic | 55.0% | |
| GCAAGCACCTTTCCACTCAG+GGG | - | chr5.2:77912001-77912020 | None:intergenic | 55.0% | |
| GCACGCATGTCAGGGTGTAA+AGG | - | chr5.2:77914346-77914365 | None:intergenic | 55.0% | |
| GGGGACCCTTCAAGCACTTT+GGG | + | chr5.2:77913326-77913345 | MS.gene030088:CDS | 55.0% | |
| GGTTTAATGAGACGGCTGCG+TGG | + | chr5.2:77914368-77914387 | MS.gene030088:CDS | 55.0% | |
| TGAGACCGGAGGGAGTAGAT+TGG | - | chr5.2:77916106-77916125 | None:intergenic | 55.0% | |
| TGGGAACTATCCACCTCCCT+TGG | + | chr5.2:77914465-77914484 | MS.gene030088:CDS | 55.0% | |
| TGGGGACCCTTCAAGCACTT+TGG | + | chr5.2:77913325-77913344 | MS.gene030088:CDS | 55.0% | |
| !! | AAGCTTTGGGTTGGGGAGTC+AGG | + | chr5.2:77913606-77913625 | MS.gene030088:CDS | 55.0% |
| AAGTCCCACCACTCGTCCCA+CGG | - | chr5.2:77914280-77914299 | None:intergenic | 60.0% | |
| CAGCGCTATGGAGGGAGTTG+AGG | - | chr5.2:77911930-77911949 | None:intergenic | 60.0% | |
| CTATGATGCCGTGGGACGAG+TGG | + | chr5.2:77914269-77914288 | MS.gene030088:CDS | 60.0% | |
| GTCGGAGCCAGTTGTGCGAA+CGG | + | chr5.2:77915923-77915942 | MS.gene030088:intron | 60.0% | |
| TACACCCTGACATGCGTGCC+AGG | + | chr5.2:77914347-77914366 | MS.gene030088:CDS | 60.0% | |
| ! | ACCAGTGCCGTTCGCACAAC+TGG | - | chr5.2:77915933-77915952 | None:intergenic | 60.0% |
| !! | CAAAAGCACCCCAGCGACCT+CGG | - | chr5.2:77913515-77913534 | None:intergenic | 60.0% |
| GATGCCGTGGGACGAGTGGT+GGG | + | chr5.2:77914273-77914292 | MS.gene030088:CDS | 65.0% | |
| GCCAGTTGTGCGAACGGCAC+TGG | + | chr5.2:77915929-77915948 | MS.gene030088:intron | 65.0% | |
| TGATGCCGTGGGACGAGTGG+TGG | + | chr5.2:77914272-77914291 | MS.gene030088:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 77911901 | 77916579 | 77911901 | ID=MS.gene030088 |
| chr5.2 | mRNA | 77911901 | 77916579 | 77911901 | ID=MS.gene030088.t1;Parent=MS.gene030088 |
| chr5.2 | exon | 77911901 | 77912098 | 77911901 | ID=MS.gene030088.t1.exon1;Parent=MS.gene030088.t1 |
| chr5.2 | CDS | 77911901 | 77912098 | 77911901 | ID=cds.MS.gene030088.t1;Parent=MS.gene030088.t1 |
| chr5.2 | exon | 77913038 | 77913178 | 77913038 | ID=MS.gene030088.t1.exon2;Parent=MS.gene030088.t1 |
| chr5.2 | CDS | 77913038 | 77913178 | 77913038 | ID=cds.MS.gene030088.t1;Parent=MS.gene030088.t1 |
| chr5.2 | exon | 77913279 | 77913644 | 77913279 | ID=MS.gene030088.t1.exon3;Parent=MS.gene030088.t1 |
| chr5.2 | CDS | 77913279 | 77913644 | 77913279 | ID=cds.MS.gene030088.t1;Parent=MS.gene030088.t1 |
| chr5.2 | exon | 77914253 | 77914498 | 77914253 | ID=MS.gene030088.t1.exon4;Parent=MS.gene030088.t1 |
| chr5.2 | CDS | 77914253 | 77914498 | 77914253 | ID=cds.MS.gene030088.t1;Parent=MS.gene030088.t1 |
| chr5.2 | exon | 77915000 | 77915092 | 77915000 | ID=MS.gene030088.t1.exon5;Parent=MS.gene030088.t1 |
| chr5.2 | CDS | 77915000 | 77915092 | 77915000 | ID=cds.MS.gene030088.t1;Parent=MS.gene030088.t1 |
| chr5.2 | exon | 77915399 | 77915599 | 77915399 | ID=MS.gene030088.t1.exon6;Parent=MS.gene030088.t1 |
| chr5.2 | CDS | 77915399 | 77915599 | 77915399 | ID=cds.MS.gene030088.t1;Parent=MS.gene030088.t1 |
| chr5.2 | exon | 77916364 | 77916579 | 77916364 | ID=MS.gene030088.t1.exon7;Parent=MS.gene030088.t1 |
| chr5.2 | CDS | 77916364 | 77916579 | 77916364 | ID=cds.MS.gene030088.t1;Parent=MS.gene030088.t1 |
| Gene Sequence |
| Protein sequence |
