Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028184.t1 | RHN42333.1 | 97.5 | 284 | 6 | 1 | 1 | 284 | 7 | 289 | 1.30E-161 | 578.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028184.t1 | Q9SIS4 | 64.1 | 295 | 95 | 4 | 1 | 284 | 1 | 295 | 3.4e-107 | 389.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028184.t1 | A0A396GP95 | 97.5 | 284 | 6 | 1 | 1 | 284 | 7 | 289 | 9.1e-162 | 578.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene018546 | MS.gene028184 | PPI |
MS.gene09836 | MS.gene028184 | PPI |
MS.gene64505 | MS.gene028184 | PPI |
MS.gene061907 | MS.gene028184 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028184.t1 | MTR_1g038810 | 68.153 | 314 | 68 | 5 | 1 | 284 | 9 | 320 | 5.33e-145 | 415 |
MS.gene028184.t1 | MTR_1g038810 | 66.879 | 314 | 68 | 6 | 1 | 284 | 9 | 316 | 2.04e-139 | 400 |
MS.gene028184.t1 | MTR_6g072010 | 53.815 | 249 | 95 | 1 | 56 | 284 | 47 | 295 | 1.19e-94 | 285 |
MS.gene028184.t1 | MTR_6g072010 | 53.815 | 249 | 95 | 1 | 56 | 284 | 58 | 306 | 3.22e-94 | 284 |
MS.gene028184.t1 | MTR_7g100070 | 39.482 | 309 | 151 | 7 | 2 | 284 | 11 | 309 | 1.33e-63 | 207 |
MS.gene028184.t1 | MTR_7g100070 | 39.610 | 308 | 151 | 7 | 2 | 284 | 11 | 308 | 1.80e-63 | 206 |
MS.gene028184.t1 | MTR_7g100070 | 39.482 | 309 | 151 | 7 | 2 | 284 | 51 | 349 | 4.27e-63 | 206 |
MS.gene028184.t1 | MTR_6g009260 | 42.636 | 258 | 121 | 5 | 53 | 284 | 54 | 310 | 6.88e-61 | 199 |
MS.gene028184.t1 | MTR_8g091360 | 56.463 | 147 | 61 | 1 | 141 | 284 | 315 | 461 | 3.77e-52 | 177 |
MS.gene028184.t1 | MTR_8g091360 | 51.852 | 81 | 37 | 2 | 46 | 125 | 131 | 210 | 4.64e-18 | 84.0 |
MS.gene028184.t1 | MTR_8g091360 | 55.333 | 150 | 64 | 1 | 138 | 284 | 312 | 461 | 3.69e-51 | 177 |
MS.gene028184.t1 | MTR_8g091360 | 51.852 | 81 | 37 | 2 | 46 | 125 | 131 | 210 | 4.30e-18 | 84.3 |
MS.gene028184.t1 | MTR_1g097690 | 52.703 | 148 | 70 | 0 | 137 | 284 | 347 | 494 | 3.09e-48 | 167 |
MS.gene028184.t1 | MTR_1g097690 | 42.529 | 87 | 49 | 1 | 40 | 126 | 87 | 172 | 3.29e-14 | 72.8 |
MS.gene028184.t1 | MTR_1g097690 | 53.020 | 149 | 70 | 0 | 137 | 285 | 347 | 495 | 5.30e-48 | 169 |
MS.gene028184.t1 | MTR_1g097690 | 42.529 | 87 | 49 | 1 | 40 | 126 | 87 | 172 | 3.90e-14 | 72.8 |
MS.gene028184.t1 | MTR_5g006820 | 52.381 | 147 | 67 | 1 | 141 | 284 | 354 | 500 | 1.17e-46 | 165 |
MS.gene028184.t1 | MTR_5g006820 | 51.852 | 81 | 36 | 2 | 47 | 125 | 84 | 163 | 7.09e-19 | 86.7 |
MS.gene028184.t1 | MTR_1g071680 | 49.412 | 170 | 78 | 3 | 119 | 284 | 269 | 434 | 1.94e-46 | 164 |
MS.gene028184.t1 | MTR_1g071680 | 48.864 | 88 | 40 | 2 | 38 | 125 | 79 | 161 | 4.12e-18 | 84.3 |
MS.gene028184.t1 | MTR_1g103330 | 49.677 | 155 | 75 | 1 | 133 | 284 | 307 | 461 | 6.25e-46 | 163 |
MS.gene028184.t1 | MTR_1g103330 | 53.086 | 81 | 35 | 2 | 47 | 125 | 82 | 161 | 2.17e-19 | 88.2 |
MS.gene028184.t1 | MTR_6g042240 | 55.319 | 141 | 63 | 0 | 144 | 284 | 332 | 472 | 1.23e-45 | 162 |
MS.gene028184.t1 | MTR_6g042240 | 52.113 | 71 | 33 | 1 | 56 | 126 | 59 | 128 | 2.48e-16 | 79.3 |
MS.gene028184.t1 | MTR_8g043480 | 49.660 | 147 | 71 | 1 | 141 | 284 | 45 | 191 | 1.31e-45 | 156 |
MS.gene028184.t1 | MTR_6g042240 | 55.319 | 141 | 63 | 0 | 144 | 284 | 372 | 512 | 1.39e-45 | 162 |
MS.gene028184.t1 | MTR_6g042240 | 52.113 | 71 | 33 | 1 | 56 | 126 | 99 | 168 | 3.20e-16 | 79.0 |
MS.gene028184.t1 | MTR_6g042240 | 55.319 | 141 | 63 | 0 | 144 | 284 | 385 | 525 | 2.09e-45 | 162 |
MS.gene028184.t1 | MTR_6g042240 | 52.113 | 71 | 33 | 1 | 56 | 126 | 112 | 181 | 3.26e-16 | 79.0 |
MS.gene028184.t1 | MTR_8g043480 | 49.660 | 147 | 71 | 1 | 141 | 284 | 175 | 321 | 1.95e-44 | 156 |
MS.gene028184.t1 | MTR_8g043480 | 47.945 | 73 | 37 | 1 | 53 | 125 | 8 | 79 | 6.49e-16 | 77.8 |
MS.gene028184.t1 | MTR_8g043480 | 49.660 | 147 | 71 | 1 | 141 | 284 | 240 | 386 | 4.71e-44 | 156 |
MS.gene028184.t1 | MTR_8g043480 | 47.945 | 73 | 37 | 1 | 53 | 125 | 73 | 144 | 7.58e-16 | 77.8 |
MS.gene028184.t1 | MTR_7g095260 | 52.083 | 144 | 66 | 1 | 144 | 284 | 239 | 382 | 1.74e-43 | 155 |
MS.gene028184.t1 | MTR_7g095260 | 54.930 | 71 | 31 | 1 | 55 | 125 | 40 | 109 | 3.83e-17 | 81.6 |
MS.gene028184.t1 | MTR_7g095260 | 52.083 | 144 | 66 | 1 | 144 | 284 | 291 | 434 | 2.67e-43 | 155 |
MS.gene028184.t1 | MTR_7g095260 | 54.930 | 71 | 31 | 1 | 55 | 125 | 92 | 161 | 5.10e-17 | 81.3 |
MS.gene028184.t1 | MTR_4g098850 | 40.909 | 198 | 104 | 2 | 94 | 285 | 544 | 734 | 1.42e-40 | 150 |
MS.gene028184.t1 | MTR_4g098850 | 46.535 | 101 | 54 | 0 | 185 | 285 | 2 | 102 | 1.48e-21 | 94.7 |
MS.gene028184.t1 | MTR_4g098850 | 30.882 | 136 | 84 | 2 | 1 | 126 | 289 | 424 | 1.45e-14 | 74.3 |
MS.gene028184.t1 | MTR_5g014090 | 44.872 | 156 | 86 | 0 | 130 | 285 | 356 | 511 | 1.67e-37 | 140 |
MS.gene028184.t1 | MTR_5g014090 | 44.330 | 97 | 49 | 2 | 42 | 134 | 93 | 188 | 4.83e-18 | 84.3 |
MS.gene028184.t1 | MTR_5g014090 | 45.455 | 154 | 84 | 0 | 130 | 283 | 356 | 509 | 1.74e-37 | 139 |
MS.gene028184.t1 | MTR_5g014090 | 44.330 | 97 | 49 | 2 | 42 | 134 | 93 | 188 | 3.83e-18 | 84.3 |
MS.gene028184.t1 | MTR_1g078100 | 25.191 | 262 | 145 | 8 | 56 | 284 | 528 | 771 | 5.40e-19 | 87.4 |
MS.gene028184.t1 | MTR_1g078100 | 25.191 | 262 | 145 | 8 | 56 | 284 | 259 | 502 | 6.25e-19 | 87.0 |
MS.gene028184.t1 | MTR_1g078100 | 25.191 | 262 | 145 | 8 | 56 | 284 | 248 | 491 | 6.28e-19 | 87.0 |
MS.gene028184.t1 | MTR_6g092670 | 24.060 | 266 | 156 | 6 | 52 | 284 | 559 | 811 | 5.35e-17 | 81.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028184.t1 | AT2G01900 | 64.407 | 295 | 94 | 4 | 1 | 284 | 1 | 295 | 6.00e-134 | 385 |
MS.gene028184.t1 | AT2G01900 | 64.068 | 295 | 95 | 4 | 1 | 284 | 9 | 303 | 1.11e-133 | 385 |
MS.gene028184.t1 | AT2G01900 | 64.068 | 295 | 95 | 4 | 1 | 284 | 1 | 295 | 1.34e-133 | 385 |
MS.gene028184.t1 | AT2G37440 | 44.512 | 328 | 135 | 8 | 2 | 284 | 11 | 336 | 7.41e-75 | 236 |
MS.gene028184.t1 | AT2G37440 | 44.512 | 328 | 135 | 8 | 2 | 284 | 11 | 336 | 7.41e-75 | 236 |
MS.gene028184.t1 | AT2G37440 | 47.471 | 257 | 104 | 4 | 57 | 284 | 1 | 255 | 5.78e-66 | 211 |
MS.gene028184.t1 | AT5G65090 | 55.782 | 147 | 62 | 1 | 141 | 284 | 199 | 345 | 2.73e-50 | 172 |
MS.gene028184.t1 | AT5G65090 | 45.783 | 83 | 44 | 1 | 56 | 138 | 11 | 92 | 1.42e-18 | 85.5 |
MS.gene028184.t1 | AT5G65090 | 55.782 | 147 | 62 | 1 | 141 | 284 | 262 | 408 | 6.25e-50 | 172 |
MS.gene028184.t1 | AT5G65090 | 45.783 | 83 | 44 | 1 | 56 | 138 | 74 | 155 | 2.21e-18 | 85.1 |
MS.gene028184.t1 | AT5G65090 | 55.782 | 147 | 62 | 1 | 141 | 284 | 262 | 408 | 6.25e-50 | 172 |
MS.gene028184.t1 | AT5G65090 | 45.783 | 83 | 44 | 1 | 56 | 138 | 74 | 155 | 2.21e-18 | 85.1 |
MS.gene028184.t1 | AT3G63240 | 51.852 | 162 | 70 | 3 | 127 | 284 | 267 | 424 | 1.53e-46 | 164 |
MS.gene028184.t1 | AT3G63240 | 55.714 | 70 | 30 | 1 | 56 | 125 | 89 | 157 | 3.96e-17 | 81.6 |
MS.gene028184.t1 | AT3G63240 | 51.852 | 162 | 70 | 3 | 127 | 284 | 267 | 424 | 1.53e-46 | 164 |
MS.gene028184.t1 | AT3G63240 | 55.714 | 70 | 30 | 1 | 56 | 125 | 89 | 157 | 3.96e-17 | 81.6 |
MS.gene028184.t1 | AT1G05470 | 53.472 | 144 | 64 | 1 | 144 | 284 | 352 | 495 | 7.96e-46 | 163 |
MS.gene028184.t1 | AT1G05470 | 57.333 | 75 | 31 | 1 | 51 | 125 | 88 | 161 | 5.04e-20 | 90.1 |
MS.gene028184.t1 | AT1G05470 | 53.472 | 144 | 64 | 1 | 144 | 284 | 352 | 495 | 7.96e-46 | 163 |
MS.gene028184.t1 | AT1G05470 | 57.333 | 75 | 31 | 1 | 51 | 125 | 88 | 161 | 5.04e-20 | 90.1 |
MS.gene028184.t1 | AT2G32010 | 53.472 | 144 | 64 | 1 | 144 | 284 | 329 | 472 | 1.80e-45 | 162 |
MS.gene028184.t1 | AT2G32010 | 57.333 | 75 | 31 | 1 | 51 | 125 | 87 | 160 | 3.13e-20 | 90.9 |
MS.gene028184.t1 | AT2G32010 | 53.472 | 144 | 64 | 1 | 144 | 284 | 329 | 472 | 1.80e-45 | 162 |
MS.gene028184.t1 | AT2G32010 | 57.333 | 75 | 31 | 1 | 51 | 125 | 87 | 160 | 3.13e-20 | 90.9 |
MS.gene028184.t1 | AT2G32010 | 53.472 | 144 | 64 | 1 | 144 | 284 | 329 | 472 | 1.80e-45 | 162 |
MS.gene028184.t1 | AT2G32010 | 57.333 | 75 | 31 | 1 | 51 | 125 | 87 | 160 | 3.13e-20 | 90.9 |
MS.gene028184.t1 | AT2G32010 | 53.472 | 144 | 64 | 1 | 144 | 284 | 329 | 472 | 1.80e-45 | 162 |
MS.gene028184.t1 | AT2G32010 | 57.333 | 75 | 31 | 1 | 51 | 125 | 87 | 160 | 3.13e-20 | 90.9 |
MS.gene028184.t1 | AT5G04980 | 51.020 | 147 | 69 | 1 | 141 | 284 | 157 | 303 | 1.18e-44 | 156 |
MS.gene028184.t1 | AT5G04980 | 51.020 | 147 | 69 | 1 | 141 | 284 | 192 | 338 | 1.99e-44 | 156 |
MS.gene028184.t1 | AT5G04980 | 52.308 | 65 | 30 | 1 | 56 | 120 | 10 | 73 | 7.88e-14 | 71.6 |
MS.gene028184.t1 | AT5G04980 | 51.020 | 147 | 69 | 1 | 141 | 284 | 192 | 338 | 1.99e-44 | 156 |
MS.gene028184.t1 | AT5G04980 | 52.308 | 65 | 30 | 1 | 56 | 120 | 10 | 73 | 7.88e-14 | 71.6 |
MS.gene028184.t1 | AT5G04980 | 51.020 | 147 | 69 | 1 | 141 | 284 | 221 | 367 | 2.29e-44 | 157 |
MS.gene028184.t1 | AT5G04980 | 52.308 | 65 | 30 | 1 | 56 | 120 | 39 | 102 | 8.65e-14 | 71.6 |
MS.gene028184.t1 | AT1G34120 | 50.000 | 144 | 70 | 1 | 144 | 285 | 185 | 328 | 3.79e-42 | 150 |
MS.gene028184.t1 | AT1G34120 | 50.000 | 144 | 70 | 1 | 144 | 285 | 336 | 479 | 5.18e-41 | 149 |
MS.gene028184.t1 | AT1G34120 | 40.000 | 100 | 59 | 1 | 40 | 139 | 86 | 184 | 6.03e-15 | 75.1 |
MS.gene028184.t1 | AT1G34120 | 50.000 | 144 | 70 | 1 | 144 | 285 | 340 | 483 | 6.28e-41 | 149 |
MS.gene028184.t1 | AT1G34120 | 40.000 | 100 | 59 | 1 | 40 | 139 | 90 | 188 | 6.11e-15 | 75.1 |
MS.gene028184.t1 | AT1G34120 | 50.360 | 139 | 67 | 1 | 144 | 280 | 336 | 474 | 1.31e-39 | 144 |
MS.gene028184.t1 | AT1G34120 | 40.000 | 100 | 59 | 1 | 40 | 139 | 86 | 184 | 5.59e-15 | 75.1 |
MS.gene028184.t1 | AT1G34120 | 50.000 | 144 | 69 | 2 | 144 | 285 | 340 | 482 | 3.04e-39 | 144 |
MS.gene028184.t1 | AT1G34120 | 40.000 | 100 | 59 | 1 | 40 | 139 | 90 | 188 | 5.99e-15 | 75.1 |
MS.gene028184.t1 | AT1G71710 | 46.809 | 141 | 75 | 0 | 144 | 284 | 402 | 542 | 1.15e-38 | 144 |
MS.gene028184.t1 | AT1G71710 | 47.126 | 87 | 45 | 1 | 40 | 126 | 104 | 189 | 6.25e-19 | 87.0 |
MS.gene028184.t1 | AT1G71710 | 46.809 | 141 | 75 | 0 | 144 | 284 | 411 | 551 | 1.27e-38 | 144 |
MS.gene028184.t1 | AT1G71710 | 47.126 | 87 | 45 | 1 | 40 | 126 | 113 | 198 | 5.57e-19 | 87.0 |
MS.gene028184.t1 | AT4G18010 | 48.227 | 141 | 73 | 0 | 144 | 284 | 392 | 532 | 4.09e-38 | 141 |
MS.gene028184.t1 | AT4G18010 | 43.158 | 95 | 53 | 1 | 42 | 136 | 98 | 191 | 4.94e-18 | 84.3 |
MS.gene028184.t1 | AT4G18010 | 48.227 | 141 | 73 | 0 | 144 | 284 | 392 | 532 | 9.15e-38 | 141 |
MS.gene028184.t1 | AT4G18010 | 43.158 | 95 | 53 | 1 | 42 | 136 | 98 | 191 | 5.07e-18 | 84.3 |
MS.gene028184.t1 | AT1G65580 | 26.415 | 265 | 147 | 8 | 56 | 286 | 273 | 523 | 1.28e-21 | 95.1 |
MS.gene028184.t1 | AT1G65580 | 26.792 | 265 | 146 | 8 | 56 | 286 | 539 | 789 | 1.42e-21 | 95.1 |
MS.gene028184.t1 | AT1G05630 | 25.475 | 263 | 148 | 6 | 56 | 284 | 572 | 820 | 7.27e-21 | 92.8 |
MS.gene028184.t1 | AT1G05630 | 25.475 | 263 | 148 | 6 | 56 | 284 | 572 | 820 | 9.43e-21 | 92.8 |
MS.gene028184.t1 | AT2G43900 | 24.242 | 264 | 151 | 6 | 56 | 284 | 577 | 826 | 1.06e-18 | 86.7 |
MS.gene028184.t1 | AT2G43900 | 24.242 | 264 | 151 | 6 | 56 | 284 | 577 | 826 | 1.14e-18 | 86.7 |
MS.gene028184.t1 | AT1G05630 | 28.495 | 186 | 112 | 4 | 56 | 234 | 572 | 743 | 3.25e-18 | 85.1 |
MS.gene028184.t1 | AT2G31830 | 24.715 | 263 | 150 | 6 | 56 | 284 | 581 | 829 | 4.01e-18 | 84.7 |
MS.gene028184.t1 | AT2G31830 | 24.715 | 263 | 150 | 6 | 56 | 284 | 581 | 829 | 4.05e-18 | 84.7 |
MS.gene028184.t1 | AT2G31830 | 24.715 | 263 | 150 | 6 | 56 | 284 | 581 | 829 | 4.23e-18 | 84.7 |
Find 50 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATTATGGAATTCCATTTAT+TGG | 0.159218 | 4.2:-16056387 | None:intergenic |
ACAATGAGATTTCCAATAAA+TGG | 0.225672 | 4.2:+16056375 | MS.gene028184:CDS |
CTTGTATTTGTGTTTGTCCT+TGG | 0.283816 | 4.2:-16055979 | None:intergenic |
GTGTGTAGCCATCTAGCTTC+AGG | 0.308501 | 4.2:+16057158 | MS.gene028184:CDS |
ACGCTTACTTGTAGAGAAAA+AGG | 0.326969 | 4.2:+16057845 | MS.gene028184:CDS |
TGCTTGGAGATTTAAATTAT+AGG | 0.331581 | 4.2:+16057799 | MS.gene028184:CDS |
TCTAAAAGCTTCAAATGTAT+TGG | 0.332943 | 4.2:+16056343 | MS.gene028184:CDS |
AATCAGAAAAGCTTTGAATA+AGG | 0.342999 | 4.2:+16056406 | MS.gene028184:CDS |
TGTTTGTCCTTGGGATGATT+AGG | 0.356217 | 4.2:-16055969 | None:intergenic |
CTAAAAGCTTCAAATGTATT+GGG | 0.357957 | 4.2:+16056344 | MS.gene028184:CDS |
TGTGGCATAATGAGATGTTT+AGG | 0.368843 | 4.2:+16056575 | MS.gene028184:CDS |
TTGTATTTGTGTTTGTCCTT+GGG | 0.382205 | 4.2:-16055978 | None:intergenic |
TCCTGTGACATCTATGTACT+TGG | 0.396131 | 4.2:+16056193 | MS.gene028184:CDS |
TTTAAACGTAGATGATTTGT+TGG | 0.420397 | 4.2:+16056156 | MS.gene028184:CDS |
TGTGTAGCCATCTAGCTTCA+GGG | 0.426156 | 4.2:+16057159 | MS.gene028184:CDS |
TTCCTTATTAGAAAATGATC+AGG | 0.438935 | 4.2:+16057875 | MS.gene028184:CDS |
TCTACGTTTAAATCTTCATC+TGG | 0.441644 | 4.2:-16056145 | None:intergenic |
AGTAAGCGTGTCGTTTCCTC+TGG | 0.445903 | 4.2:-16057831 | None:intergenic |
TAACATGTGGCCTACATTAG+TGG | 0.470394 | 4.2:+16055830 | None:intergenic |
TGCAGTCATGTAATATTGCT+TGG | 0.474593 | 4.2:+16057783 | MS.gene028184:intron |
ATGTATAATTAGCAAACAAA+TGG | 0.477259 | 4.2:+16056475 | MS.gene028184:CDS |
AAAGGTTCATCATAACTAGT+AGG | 0.480138 | 4.2:-16055906 | None:intergenic |
CAACCTATGCATGACACACT+TGG | 0.485601 | 4.2:-16056554 | None:intergenic |
TTTGTTAGTACATGGAACAT+AGG | 0.487262 | 4.2:+16056112 | MS.gene028184:CDS |
AGGATAATCTGCTATGAAGT+TGG | 0.488924 | 4.2:-16055886 | None:intergenic |
TTGGAATATTCATATCTGTA+TGG | 0.499275 | 4.2:+16056498 | MS.gene028184:CDS |
TCATGGTCTAGAATATATCT+TGG | 0.503097 | 4.2:-16057272 | None:intergenic |
TTTGTTTGCTAATTATACAT+TGG | 0.521389 | 4.2:-16056472 | None:intergenic |
ACACTTGGATGTTGAATGAA+TGG | 0.524578 | 4.2:-16056539 | None:intergenic |
AAACGTAGATGATTTGTTGG+AGG | 0.529826 | 4.2:+16056159 | MS.gene028184:CDS |
ATAATTAGCAAACAAATGGT+TGG | 0.541121 | 4.2:+16056479 | MS.gene028184:CDS |
TTAGTACATGGAACATAGGT+GGG | 0.544468 | 4.2:+16056116 | MS.gene028184:CDS |
AATTCAAACAAAGGACCTCT+AGG | 0.548525 | 4.2:-16057248 | None:intergenic |
GTTAGTACATGGAACATAGG+TGG | 0.556986 | 4.2:+16056115 | MS.gene028184:CDS |
ATCTTATTAGCCACTAATGT+AGG | 0.560756 | 4.2:-16055840 | None:intergenic |
AAGATACTCAAGAAGCGACT+AGG | 0.561529 | 4.2:+16055858 | MS.gene028184:CDS |
CATCCAAGTGTGTCATGCAT+AGG | 0.576317 | 4.2:+16056551 | MS.gene028184:CDS |
GTGTAGCCATCTAGCTTCAG+GGG | 0.595621 | 4.2:+16057160 | MS.gene028184:CDS |
TATCTTGGCAATTCAAACAA+AGG | 0.595816 | 4.2:-16057257 | None:intergenic |
CCCAAGTACATAGATGTCAC+AGG | 0.603987 | 4.2:-16056194 | None:intergenic |
ACATTGGAAATCATCATGTG+TGG | 0.610903 | 4.2:-16056456 | None:intergenic |
CCTGTGACATCTATGTACTT+GGG | 0.620340 | 4.2:+16056194 | MS.gene028184:CDS |
AATGAGATGTTTAGGAAACA+AGG | 0.621139 | 4.2:+16056583 | MS.gene028184:CDS |
AACAGTTCCTAATCATCCCA+AGG | 0.629549 | 4.2:+16055962 | MS.gene028184:CDS |
ATGTCTGCAAAATTCAACAA+AGG | 0.633351 | 4.2:-16055924 | None:intergenic |
TCTAGGACTAGCTTTCCTAG+AGG | 0.647556 | 4.2:+16057233 | MS.gene028184:CDS |
TTATAGGATATCTCTTCCAG+AGG | 0.665637 | 4.2:+16057815 | MS.gene028184:CDS |
TATTCATATCTGTATGGACA+AGG | 0.666150 | 4.2:+16056504 | MS.gene028184:CDS |
AGTGTGTCATGCATAGGTTG+TGG | 0.684284 | 4.2:+16056557 | MS.gene028184:CDS |
TGTAGCCATCTAGCTTCAGG+GGG | 0.696209 | 4.2:+16057161 | MS.gene028184:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAGATTGATTAATTAATT+TGG | - | chr4.2:16059012-16059031 | None:intergenic | 10.0% |
!! | TTAATAATATGAATTTCATA+TGG | - | chr4.2:16056649-16056668 | None:intergenic | 10.0% |
!!! | AGATTAACATATTAATATTT+TGG | - | chr4.2:16057517-16057536 | None:intergenic | 10.0% |
!!! | TTTAAAGAGAATTTTTTTAA+TGG | - | chr4.2:16057926-16057945 | None:intergenic | 10.0% |
!! | AAGTAAAAAAAAATTATCCA+TGG | - | chr4.2:16058402-16058421 | None:intergenic | 15.0% |
!!! | ATTATAAACATGTTTTTCTA+TGG | - | chr4.2:16056254-16056273 | None:intergenic | 15.0% |
!!! | TGTTTGTTATTCTTAATTTT+AGG | + | chr4.2:16058469-16058488 | MS.gene028184:intron | 15.0% |
!!! | TTAACATATTAATATTTTGG+AGG | - | chr4.2:16057514-16057533 | None:intergenic | 15.0% |
!!! | TTTTGTTTATTTTCATGTAA+AGG | + | chr4.2:16056086-16056105 | MS.gene028184:intron | 15.0% |
!! | AAAATATCAAGCTTGAAATT+TGG | + | chr4.2:16056839-16056858 | MS.gene028184:intron | 20.0% |
!! | AATACAGAAAATTATTCACT+TGG | - | chr4.2:16058952-16058971 | None:intergenic | 20.0% |
!! | ACAATATTAGAAATGTTAAG+AGG | - | chr4.2:16056067-16056086 | None:intergenic | 20.0% |
!! | AGTAGTATTAGAAATCAAAT+TGG | - | chr4.2:16057320-16057339 | None:intergenic | 20.0% |
!! | ATACAGAAAATTATTCACTT+GGG | - | chr4.2:16058951-16058970 | None:intergenic | 20.0% |
!! | ATGTATAATTAGCAAACAAA+TGG | + | chr4.2:16056475-16056494 | MS.gene028184:CDS | 20.0% |
!! | ATTATTAAATTAAACGCAAG+AGG | - | chr4.2:16057358-16057377 | None:intergenic | 20.0% |
!! | ATTTCAGCCAAAAAAATATT+TGG | - | chr4.2:16057416-16057435 | None:intergenic | 20.0% |
!! | TTATTAAATTAAACGCAAGA+GGG | - | chr4.2:16057357-16057376 | None:intergenic | 20.0% |
!!! | AATTTTTACTGCAGAAATAA+GGG | + | chr4.2:16058584-16058603 | MS.gene028184:intron | 20.0% |
!!! | ATATTTACAACGTTTTTCTT+TGG | - | chr4.2:16057643-16057662 | None:intergenic | 20.0% |
!!! | ATTGATTAATTAATTTGGAG+TGG | - | chr4.2:16059007-16059026 | None:intergenic | 20.0% |
!!! | GATTTTAGTCTTTAGATTAT+TGG | - | chr4.2:16057036-16057055 | None:intergenic | 20.0% |
!!! | TTGATTAATTAATTTGGAGT+GGG | - | chr4.2:16059006-16059025 | None:intergenic | 20.0% |
!!! | TTTGTTTGCTAATTATACAT+TGG | - | chr4.2:16056475-16056494 | None:intergenic | 20.0% |
! | AAAGAGAATTAGAATTTGAG+TGG | + | chr4.2:16058788-16058807 | MS.gene028184:intron | 25.0% |
! | ACAATGAGATTTCCAATAAA+TGG | + | chr4.2:16056375-16056394 | MS.gene028184:CDS | 25.0% |
! | ACTAAAATCATGCATCTAAT+TGG | + | chr4.2:16057047-16057066 | MS.gene028184:intron | 25.0% |
! | AGAATATTGATCATTAGTGA+CGG | - | chr4.2:16057464-16057483 | None:intergenic | 25.0% |
! | ATAATTAGCAAACAAATGGT+TGG | + | chr4.2:16056479-16056498 | MS.gene028184:CDS | 25.0% |
! | ATATGAATTTCATATGGAGT+TGG | - | chr4.2:16056643-16056662 | None:intergenic | 25.0% |
! | ATGGAAAAAAGATAGAAAAG+AGG | + | chr4.2:16058105-16058124 | MS.gene028184:intron | 25.0% |
! | CACAATAAATCATGAAAACA+AGG | + | chr4.2:16057389-16057408 | MS.gene028184:intron | 25.0% |
! | CCAAATTCGGATATATATTA+TGG | + | chr4.2:16058071-16058090 | MS.gene028184:intron | 25.0% |
! | CCATAATATATATCCGAATT+TGG | - | chr4.2:16058074-16058093 | None:intergenic | 25.0% |
! | CTAAAAGCTTCAAATGTATT+GGG | + | chr4.2:16056344-16056363 | MS.gene028184:CDS | 25.0% |
! | CTAATTTAATTGCATCCAAT+GGG | + | chr4.2:16057957-16057976 | MS.gene028184:intron | 25.0% |
! | CTACAAATATTGTCCAAATT+CGG | + | chr4.2:16058058-16058077 | MS.gene028184:intron | 25.0% |
! | CTCATTAATCAATTAGTATG+TGG | - | chr4.2:16057721-16057740 | None:intergenic | 25.0% |
! | CTGGTAGTATATAATATAGT+GGG | + | chr4.2:16057595-16057614 | MS.gene028184:intron | 25.0% |
! | GATTATGGAATTCCATTTAT+TGG | - | chr4.2:16056390-16056409 | None:intergenic | 25.0% |
! | GTATTAGAAATCAAATTGGA+CGG | - | chr4.2:16057316-16057335 | None:intergenic | 25.0% |
! | TCTAAAAGCTTCAAATGTAT+TGG | + | chr4.2:16056343-16056362 | MS.gene028184:CDS | 25.0% |
! | TCTAATTTAATTGCATCCAA+TGG | + | chr4.2:16057956-16057975 | MS.gene028184:intron | 25.0% |
! | TCTGGTAGTATATAATATAG+TGG | + | chr4.2:16057594-16057613 | MS.gene028184:intron | 25.0% |
! | TGCTTGGAGATTTAAATTAT+AGG | + | chr4.2:16057799-16057818 | MS.gene028184:CDS | 25.0% |
! | TTATAGGCTTATAGCATTAT+AGG | - | chr4.2:16056614-16056633 | None:intergenic | 25.0% |
! | TTATTAATTTCTTACCAAGC+TGG | - | chr4.2:16058137-16058156 | None:intergenic | 25.0% |
! | TTCCTTATTAGAAAATGATC+AGG | + | chr4.2:16057875-16057894 | MS.gene028184:CDS | 25.0% |
! | TTGGAATATTCATATCTGTA+TGG | + | chr4.2:16056498-16056517 | MS.gene028184:CDS | 25.0% |
!! | AAAGGATTTTTGTTAGTACA+TGG | + | chr4.2:16056104-16056123 | MS.gene028184:intron | 25.0% |
!! | AACCTGATCATTTTCTAATA+AGG | - | chr4.2:16057880-16057899 | None:intergenic | 25.0% |
!! | ATAAACATGTTTTTCTATGG+TGG | - | chr4.2:16056251-16056270 | None:intergenic | 25.0% |
!! | ATTCAAAGCTTTTCTGATTA+TGG | - | chr4.2:16056405-16056424 | None:intergenic | 25.0% |
!! | CAATTTTTACTGCAGAAATA+AGG | + | chr4.2:16058583-16058602 | MS.gene028184:intron | 25.0% |
!! | TAAAAGTGTGTAGTATAAAG+TGG | - | chr4.2:16058379-16058398 | None:intergenic | 25.0% |
!! | TTCAAATTGTTACTTACTCA+TGG | - | chr4.2:16057292-16057311 | None:intergenic | 25.0% |
!! | TTTAAACGTAGATGATTTGT+TGG | + | chr4.2:16056156-16056175 | MS.gene028184:CDS | 25.0% |
!!! | AATACATTTGAAGCTTTTAG+AGG | - | chr4.2:16056344-16056363 | None:intergenic | 25.0% |
!!! | AATCAGAAAAGCTTTGAATA+AGG | + | chr4.2:16056406-16056425 | MS.gene028184:CDS | 25.0% |
!!! | ACAAGGTCCAAATATTTTTT+TGG | + | chr4.2:16057406-16057425 | MS.gene028184:intron | 25.0% |
!!! | ATGTTGCTGAAATTTTTTCT+AGG | + | chr4.2:16057216-16057235 | MS.gene028184:CDS | 25.0% |
!!! | GTTCTGTTTTATTACAATTC+AGG | + | chr4.2:16056303-16056322 | MS.gene028184:intron | 25.0% |
AAAGGTTCATCATAACTAGT+AGG | - | chr4.2:16055909-16055928 | None:intergenic | 30.0% | |
AATCAAGACTATCAGATCAT+AGG | + | chr4.2:16058550-16058569 | MS.gene028184:intron | 30.0% | |
AATGAGATGTTTAGGAAACA+AGG | + | chr4.2:16056583-16056602 | MS.gene028184:CDS | 30.0% | |
AGAATTAGAATTTGAGTGGA+AGG | + | chr4.2:16058792-16058811 | MS.gene028184:intron | 30.0% | |
ATCTTATTAGCCACTAATGT+AGG | - | chr4.2:16055843-16055862 | None:intergenic | 30.0% | |
ATGAATGGCAACAATTTAAG+AGG | + | chr4.2:16058002-16058021 | MS.gene028184:intron | 30.0% | |
ATGTCTGCAAAATTCAACAA+AGG | - | chr4.2:16055927-16055946 | None:intergenic | 30.0% | |
ATTCACCATCAGTGTAATTA+TGG | + | chr4.2:16058735-16058754 | MS.gene028184:intron | 30.0% | |
CGAATTTGGACAATATTTGT+AGG | - | chr4.2:16058060-16058079 | None:intergenic | 30.0% | |
GATATATGACATATGTGATG+AGG | - | chr4.2:16056689-16056708 | None:intergenic | 30.0% | |
TATACAAAACATGGATCAGT+GGG | - | chr4.2:16056227-16056246 | None:intergenic | 30.0% | |
TATACTACCAGAAAACAGAT+AGG | - | chr4.2:16057586-16057605 | None:intergenic | 30.0% | |
TATCTTGGCAATTCAAACAA+AGG | - | chr4.2:16057260-16057279 | None:intergenic | 30.0% | |
TATGTCCATAATTACACTGA+TGG | - | chr4.2:16058743-16058762 | None:intergenic | 30.0% | |
TATGTGGTTAACTGTAACAT+TGG | - | chr4.2:16057705-16057724 | None:intergenic | 30.0% | |
TATTCATATCTGTATGGACA+AGG | + | chr4.2:16056504-16056523 | MS.gene028184:CDS | 30.0% | |
TCTACGTTTAAATCTTCATC+TGG | - | chr4.2:16056148-16056167 | None:intergenic | 30.0% | |
TGATCAATATTCTCCAACTT+TGG | + | chr4.2:16057471-16057490 | MS.gene028184:intron | 30.0% | |
TTGTATTTGTGTTTGTCCTT+GGG | - | chr4.2:16055981-16056000 | None:intergenic | 30.0% | |
TTTGGACAATATTTGTAGGT+AGG | - | chr4.2:16058056-16058075 | None:intergenic | 30.0% | |
TTTGTTAGTACATGGAACAT+AGG | + | chr4.2:16056112-16056131 | MS.gene028184:CDS | 30.0% | |
! | ATGGAGTTGGTTATAGTTAT+AGG | - | chr4.2:16056630-16056649 | None:intergenic | 30.0% |
! | CTAATGATGGAGTTAATGAA+TGG | + | chr4.2:16057987-16058006 | MS.gene028184:intron | 30.0% |
! | TATACTACACACTTTTACCA+TGG | + | chr4.2:16058382-16058401 | MS.gene028184:intron | 30.0% |
! | TCATGGTCTAGAATATATCT+TGG | - | chr4.2:16057275-16057294 | None:intergenic | 30.0% |
!! | TAGTATATAATATAGTGGGC+CGG | + | chr4.2:16057599-16057618 | MS.gene028184:intron | 30.0% |
!! | TCTACACCAATTAATTTGCA+GGG | + | chr4.2:16057089-16057108 | MS.gene028184:intron | 30.0% |
!! | TTCTACACCAATTAATTTGC+AGG | + | chr4.2:16057088-16057107 | MS.gene028184:intron | 30.0% |
!! | TTGTACACCAATTAATTTGC+AGG | + | chr4.2:16057001-16057020 | MS.gene028184:intron | 30.0% |
!! | TTTTAAAAGGTCGACATTGA+CGG | - | chr4.2:16056930-16056949 | None:intergenic | 30.0% |
!!! | CATAAAGTTTTTTGTTGCTG+AGG | + | chr4.2:16058841-16058860 | MS.gene028184:intron | 30.0% |
!!! | TTTGGAGGCATTTTTTCTAT+GGG | - | chr4.2:16057499-16057518 | None:intergenic | 30.0% |
!!! | TTTTGGAGGCATTTTTTCTA+TGG | - | chr4.2:16057500-16057519 | None:intergenic | 30.0% |
AATGGGAATGAAGCTAATGA+TGG | + | chr4.2:16057974-16057993 | MS.gene028184:intron | 35.0% | |
AATGTCGTCTATGTTTGTGT+TGG | - | chr4.2:16058203-16058222 | None:intergenic | 35.0% | |
AATTCAAACAAAGGACCTCT+AGG | - | chr4.2:16057251-16057270 | None:intergenic | 35.0% | |
AATTTAAGAGGATGGCATGA+AGG | + | chr4.2:16058014-16058033 | MS.gene028184:intron | 35.0% | |
AATTTGAGTGGAAGGAAAGT+GGG | + | chr4.2:16058800-16058819 | MS.gene028184:intron | 35.0% | |
ACACTTGGATGTTGAATGAA+TGG | - | chr4.2:16056542-16056561 | None:intergenic | 35.0% | |
ACAGAACCCTGCAAATTAAT+TGG | - | chr4.2:16057098-16057117 | None:intergenic | 35.0% | |
ACATTGGAAATCATCATGTG+TGG | - | chr4.2:16056459-16056478 | None:intergenic | 35.0% | |
ACGCTTACTTGTAGAGAAAA+AGG | + | chr4.2:16057845-16057864 | MS.gene028184:CDS | 35.0% | |
ACTTGTAGAGAAAAAGGACT+GGG | + | chr4.2:16057851-16057870 | MS.gene028184:CDS | 35.0% | |
AGAAATAAGGGTTTGATCTG+AGG | + | chr4.2:16058596-16058615 | MS.gene028184:intron | 35.0% | |
AGGATAATCTGCTATGAAGT+TGG | - | chr4.2:16055889-16055908 | None:intergenic | 35.0% | |
ATCACTGTCAACATTCGATT+TGG | + | chr4.2:16056706-16056725 | MS.gene028184:intron | 35.0% | |
ATGGCAACAATTTAAGAGGA+TGG | + | chr4.2:16058006-16058025 | MS.gene028184:intron | 35.0% | |
CAATAGTGTTCTACATGTGT+CGG | - | chr4.2:16058312-16058331 | None:intergenic | 35.0% | |
CAATTAACCAATGAGATGCA+AGG | - | chr4.2:16056971-16056990 | None:intergenic | 35.0% | |
CGAATAGTATGGTATGGAAA+GGG | + | chr4.2:16058498-16058517 | MS.gene028184:intron | 35.0% | |
CTATACAAAACATGGATCAG+TGG | - | chr4.2:16056228-16056247 | None:intergenic | 35.0% | |
CTTGTATTTGTGTTTGTCCT+TGG | - | chr4.2:16055982-16056001 | None:intergenic | 35.0% | |
GCAGAAACCTGCAAATTAAT+TGG | - | chr4.2:16057011-16057030 | None:intergenic | 35.0% | |
GCAGTAAAAATTGCCTTAAC+AGG | - | chr4.2:16058576-16058595 | None:intergenic | 35.0% | |
GCTTGAAATTTGGATCATCA+CGG | + | chr4.2:16056849-16056868 | MS.gene028184:intron | 35.0% | |
GTAACTTTCTATTTACGCAC+CGG | - | chr4.2:16057621-16057640 | None:intergenic | 35.0% | |
GTAGAAAACAATCAAGCTTC+CGG | + | chr4.2:16058706-16058725 | MS.gene028184:intron | 35.0% | |
TACTTGTAGAGAAAAAGGAC+TGG | + | chr4.2:16057850-16057869 | MS.gene028184:CDS | 35.0% | |
TAGGTAGGAGCAAATTTGAT+TGG | - | chr4.2:16058041-16058060 | None:intergenic | 35.0% | |
TATGGTGGCTATACAAAACA+TGG | - | chr4.2:16056236-16056255 | None:intergenic | 35.0% | |
TCGAATAGTATGGTATGGAA+AGG | + | chr4.2:16058497-16058516 | MS.gene028184:intron | 35.0% | |
TCTACATACAAGTTCATCTG+TGG | - | chr4.2:16058691-16058710 | None:intergenic | 35.0% | |
TCTGTGGTAGAAACTTCAAA+AGG | - | chr4.2:16058675-16058694 | None:intergenic | 35.0% | |
TGACATATGTGATGAGGTTA+TGG | - | chr4.2:16056683-16056702 | None:intergenic | 35.0% | |
TGCAGTCATGTAATATTGCT+TGG | + | chr4.2:16057783-16057802 | MS.gene028184:intron | 35.0% | |
TGTGATCGAATAGTATGGTA+TGG | + | chr4.2:16058492-16058511 | MS.gene028184:intron | 35.0% | |
TGTGGCATAATGAGATGTTT+AGG | + | chr4.2:16056575-16056594 | MS.gene028184:CDS | 35.0% | |
TTAGGTGTGATCGAATAGTA+TGG | + | chr4.2:16058487-16058506 | MS.gene028184:intron | 35.0% | |
TTAGTACATGGAACATAGGT+GGG | + | chr4.2:16056116-16056135 | MS.gene028184:CDS | 35.0% | |
TTATAGGATATCTCTTCCAG+AGG | + | chr4.2:16057815-16057834 | MS.gene028184:CDS | 35.0% | |
! | ACTGATGGTGAATTTACAAC+CGG | - | chr4.2:16058728-16058747 | None:intergenic | 35.0% |
! | ATCATTAGCTTCATTCCCAT+TGG | - | chr4.2:16057975-16057994 | None:intergenic | 35.0% |
! | TATTATGGTTGCTGTTGTCA+TGG | + | chr4.2:16058086-16058105 | MS.gene028184:intron | 35.0% |
! | TCTAAAACCTTGCATCTCAT+TGG | + | chr4.2:16056961-16056980 | MS.gene028184:intron | 35.0% |
! | TGAGGAGTATATAGTGAAGT+TGG | + | chr4.2:16058859-16058878 | MS.gene028184:intron | 35.0% |
!! | AAACGTAGATGATTTGTTGG+AGG | + | chr4.2:16056159-16056178 | MS.gene028184:CDS | 35.0% |
!! | AAAGTGTCCTATCTGTTTTC+TGG | + | chr4.2:16057576-16057595 | MS.gene028184:intron | 35.0% |
!!! | GACTATTGGCTGCTTTTAAA+AGG | - | chr4.2:16056943-16056962 | None:intergenic | 35.0% |
!!! | GATGCAAGGTTTTAGACTAT+TGG | - | chr4.2:16056957-16056976 | None:intergenic | 35.0% |
!!! | TTGGAGGCATTTTTTCTATG+GGG | - | chr4.2:16057498-16057517 | None:intergenic | 35.0% |
AAAGTGGGAAAGTTGTTGCA+GGG | + | chr4.2:16058815-16058834 | MS.gene028184:intron | 40.0% | |
AACAGTTCCTAATCATCCCA+AGG | + | chr4.2:16055962-16055981 | MS.gene028184:CDS | 40.0% | |
AAGATACTCAAGAAGCGACT+AGG | + | chr4.2:16055858-16055877 | MS.gene028184:CDS | 40.0% | |
ATCAGATCATAGGCCTGTTA+AGG | + | chr4.2:16058560-16058579 | MS.gene028184:intron | 40.0% | |
ATCCAAGTACTAGTGATCAG+AGG | - | chr4.2:16056024-16056043 | None:intergenic | 40.0% | |
ATCCTCTGATCACTAGTACT+TGG | + | chr4.2:16056019-16056038 | MS.gene028184:intron | 40.0% | |
CAATACAACAACCACTGATG+TGG | - | chr4.2:16056770-16056789 | None:intergenic | 40.0% | |
CCTGTGACATCTATGTACTT+GGG | + | chr4.2:16056194-16056213 | MS.gene028184:CDS | 40.0% | |
GAATTTGAGTGGAAGGAAAG+TGG | + | chr4.2:16058799-16058818 | MS.gene028184:intron | 40.0% | |
GTTAGTACATGGAACATAGG+TGG | + | chr4.2:16056115-16056134 | MS.gene028184:CDS | 40.0% | |
TCATGCAGTAAGCACATTAG+TGG | - | chr4.2:16056875-16056894 | None:intergenic | 40.0% | |
TCCTGTGACATCTATGTACT+TGG | + | chr4.2:16056193-16056212 | MS.gene028184:CDS | 40.0% | |
TGATCATTAGTGACGGTTCT+TGG | - | chr4.2:16057457-16057476 | None:intergenic | 40.0% | |
TGTTTGTCCTTGGGATGATT+AGG | - | chr4.2:16055972-16055991 | None:intergenic | 40.0% | |
! | ATGTGTGGGATTTTTCCTAG+AGG | - | chr4.2:16056736-16056755 | None:intergenic | 40.0% |
! | TTTTCTATGGGGACCAAAGT+TGG | - | chr4.2:16057487-16057506 | None:intergenic | 40.0% |
!! | ATTCGATTTGGATTGCCTCT+AGG | + | chr4.2:16056718-16056737 | MS.gene028184:intron | 40.0% |
AAGTGGGAAAGTTGTTGCAG+GGG | + | chr4.2:16058816-16058835 | MS.gene028184:intron | 45.0% | |
AGTGTGTCATGCATAGGTTG+TGG | + | chr4.2:16056557-16056576 | MS.gene028184:CDS | 45.0% | |
CAACCTATGCATGACACACT+TGG | - | chr4.2:16056557-16056576 | None:intergenic | 45.0% | |
CATCCAAGTGTGTCATGCAT+AGG | + | chr4.2:16056551-16056570 | MS.gene028184:CDS | 45.0% | |
CCCAAGTACATAGATGTCAC+AGG | - | chr4.2:16056197-16056216 | None:intergenic | 45.0% | |
GAAAGTGGGAAAGTTGTTGC+AGG | + | chr4.2:16058814-16058833 | MS.gene028184:intron | 45.0% | |
GGTGTATTCCAACATGACAC+AGG | - | chr4.2:16058291-16058310 | None:intergenic | 45.0% | |
TATGTGAGCCTGTGTCATGT+TGG | + | chr4.2:16058280-16058299 | MS.gene028184:intron | 45.0% | |
TGAAGCAGCTTGAGTACACA+AGG | + | chr4.2:16058523-16058542 | MS.gene028184:intron | 45.0% | |
TGGTAACTGCACGAATGTGT+GGG | - | chr4.2:16056750-16056769 | None:intergenic | 45.0% | |
! | ACAAGTTGAGAGAGCTAGAG+AGG | - | chr4.2:16057750-16057769 | None:intergenic | 45.0% |
! | CAAGTTGAGAGAGCTAGAGA+GGG | - | chr4.2:16057749-16057768 | None:intergenic | 45.0% |
! | TGTGTAGCCATCTAGCTTCA+GGG | + | chr4.2:16057159-16057178 | MS.gene028184:CDS | 45.0% |
!! | AAGGTCGACATTGACGGATT+TGG | - | chr4.2:16056924-16056943 | None:intergenic | 45.0% |
!! | TCTAGGACTAGCTTTCCTAG+AGG | + | chr4.2:16057233-16057252 | MS.gene028184:CDS | 45.0% |
AGTGGGAAAGTTGTTGCAGG+GGG | + | chr4.2:16058817-16058836 | MS.gene028184:intron | 50.0% | |
GTGGTAACTGCACGAATGTG+TGG | - | chr4.2:16056751-16056770 | None:intergenic | 50.0% | |
TAGCTTCAGGGGGCAAAGAA+GGG | + | chr4.2:16057171-16057190 | MS.gene028184:CDS | 50.0% | |
TCGTGCAGTTACCACATCAG+TGG | + | chr4.2:16056756-16056775 | MS.gene028184:intron | 50.0% | |
! | GTGTAGCCATCTAGCTTCAG+GGG | + | chr4.2:16057160-16057179 | MS.gene028184:CDS | 50.0% |
! | GTGTGTAGCCATCTAGCTTC+AGG | + | chr4.2:16057158-16057177 | MS.gene028184:CDS | 50.0% |
! | TGTAGCCATCTAGCTTCAGG+GGG | + | chr4.2:16057161-16057180 | MS.gene028184:CDS | 50.0% |
!! | AGTAAGCGTGTCGTTTCCTC+TGG | - | chr4.2:16057834-16057853 | None:intergenic | 50.0% |
AAAAGAGGCGAGCACCAGCT+TGG | + | chr4.2:16058120-16058139 | MS.gene028184:intron | 55.0% | |
AGCTTCAGGGGGCAAAGAAG+GGG | + | chr4.2:16057172-16057191 | MS.gene028184:CDS | 55.0% | |
CTAGCTTCAGGGGGCAAAGA+AGG | + | chr4.2:16057170-16057189 | MS.gene028184:CDS | 55.0% | |
CTTTGCCCCCTGAAGCTAGA+TGG | - | chr4.2:16057169-16057188 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 16055834 | 16059050 | 16055834 | ID=MS.gene028184 |
chr4.2 | mRNA | 16055834 | 16059050 | 16055834 | ID=MS.gene028184.t1;Parent=MS.gene028184 |
chr4.2 | exon | 16055834 | 16056000 | 16055834 | ID=MS.gene028184.t1.exon1;Parent=MS.gene028184.t1 |
chr4.2 | CDS | 16055834 | 16056000 | 16055834 | ID=cds.MS.gene028184.t1;Parent=MS.gene028184.t1 |
chr4.2 | exon | 16056108 | 16056215 | 16056108 | ID=MS.gene028184.t1.exon2;Parent=MS.gene028184.t1 |
chr4.2 | CDS | 16056108 | 16056215 | 16056108 | ID=cds.MS.gene028184.t1;Parent=MS.gene028184.t1 |
chr4.2 | exon | 16056325 | 16056604 | 16056325 | ID=MS.gene028184.t1.exon3;Parent=MS.gene028184.t1 |
chr4.2 | CDS | 16056325 | 16056604 | 16056325 | ID=cds.MS.gene028184.t1;Parent=MS.gene028184.t1 |
chr4.2 | exon | 16057110 | 16057294 | 16057110 | ID=MS.gene028184.t1.exon4;Parent=MS.gene028184.t1 |
chr4.2 | CDS | 16057110 | 16057294 | 16057110 | ID=cds.MS.gene028184.t1;Parent=MS.gene028184.t1 |
chr4.2 | exon | 16057788 | 16057896 | 16057788 | ID=MS.gene028184.t1.exon5;Parent=MS.gene028184.t1 |
chr4.2 | CDS | 16057788 | 16057896 | 16057788 | ID=cds.MS.gene028184.t1;Parent=MS.gene028184.t1 |
chr4.2 | exon | 16059039 | 16059050 | 16059039 | ID=MS.gene028184.t1.exon6;Parent=MS.gene028184.t1 |
chr4.2 | CDS | 16059039 | 16059050 | 16059039 | ID=cds.MS.gene028184.t1;Parent=MS.gene028184.t1 |
Gene Sequence |
Protein sequence |